MD14G1163000.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
25727330 .. 25727959
630 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1163000.v1.1.491

Sequence Viewer

Length: 126 bp
ATGTTTGGGAAGATAAGAGCGTCTTCTTGTCCGGCGGAAAGCTTGGAGAGACCGCCTTCCAAGATTTTCAAAGACGATTCTCTCTCTATCTACGGCTACACTCATGAAGCTCAAATTAGGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

42

Amino Acids

4.68

Weight (kDa)

7.92

Isoelectric Point (pI)

39.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0016677)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48490
fragaria_vesca FvH4_5g07590
malus_domestica MD06G1149100.v1.1 MD14G1163000.v1.1
prunus_persica Prupe.5G156300_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0190901
rosa_laevigata RLG00000004487
rosa_multiflora Rmu_sc0004443.1_g000020
rosa_samantha Rh1BG013800 Rh7AG114600 Rh7BG117000 Rh7CG120100 Rh7DG118400
rosa_wichuraiana Rw7G010000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 35, 53
AgsI TTSAA 1 cut(s) 70
AluBI AGCT 2 cut(s) 42, 110
AluI AGCT 2 cut(s) 42, 110
Alw26I GTCTC 1 cut(s) 43
BbsI GAAGAC 1 cut(s) 15
BceAI ACGGC 1 cut(s) 109
BcoDI GTCTC 1 cut(s) 43
BpiI GAAGAC 1 cut(s) 15
BsaI GGTCTC 1 cut(s) 43
BsiSI CCGG 1 cut(s) 32
BsmAI GTCTC 1 cut(s) 43
Bso31I GGTCTC 1 cut(s) 43
BspACI CCGC 2 cut(s) 35, 53
BspHI TCATGA 1 cut(s) 103
BspTNI GGTCTC 1 cut(s) 43
BstMAI GTCTC 1 cut(s) 43
BstV2I GAAGAC 1 cut(s) 15
CciI TCATGA 1 cut(s) 103
CseI GACGC 1 cut(s) 9
CviAII CATG 1 cut(s) 104
CviJI RGCY 3 cut(s) 42, 96, 110
CviKI_1 RGCY 3 cut(s) 42, 96, 110
EciI GGCGGA 1 cut(s) 50
Eco31I GGTCTC 1 cut(s) 43
FaeI CATG 1 cut(s) 107
FaiI YATR 1 cut(s) 105
FalI AAGNNNNNCTT 2 cut(s) 7, 39
FatI CATG 1 cut(s) 103
FspEI CC 9 cut(s) 17, 20, 29, 45, 66, 69, 73, 78, 103
HapII CCGG 1 cut(s) 32
HgaI GACGC 1 cut(s) 9
Hin1II CATG 1 cut(s) 107
HindIII AAGCTT 1 cut(s) 40
HinfI GANTC 1 cut(s) 77
HpaII CCGG 1 cut(s) 32
Hpy188III TCNNGA 1 cut(s) 104
HpyAV CCTTC 1 cut(s) 66
Hsp92II CATG 1 cut(s) 107
LpnPI CCDG 1 cut(s) 45
MboII GAAGA 2 cut(s) 15, 22
MluCI AATT 1 cut(s) 114
MspI CCGG 1 cut(s) 32
NlaIII CATG 1 cut(s) 107
PagI TCATGA 1 cut(s) 103
PfeI GAWTC 1 cut(s) 77
SetI ASST 3 cut(s) 44, 112, 122
SgeI CNNG 5 cut(s) 39, 44, 55, 73, 116
Sse9I AATT 1 cut(s) 114
SsiI CCGC 2 cut(s) 35, 53
TasI AATT 1 cut(s) 114
TfiI GAWTC 1 cut(s) 77
TspDTI ATGAA 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.