MD14G1177400.v1.1

phosphatase 2A 55 kDa regulatory subunit B

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
27068453 .. 27073545
5093 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1177400.v1.1.491

Sequence Viewer

Length: 1530 bp
ATGACTTTGAGCTCTGGCCCTCCGGCCCCTCTGCCTTTAGAGTGGAAATTCTCTCAGGTCTTCGGCGAACGAGCTCCCGGAGAAGACCTTCACGATGGTGATATGATATCCGCAATTGGATTCGACAAGAGTGGTGATTTCCTTGCCATTGGAGATCGGGGTGGCCGATGTGTGATATTCGAGAGGAAGGATGGGAAACATACTTTAAATCAGCAACGCCCTCAACATGAATTGGAGCAGTTGGATTTCACGTCCACCCAGCATCCTGAATTTCAGTTTAAGACTGAGTTTCAGAGTCATGAACCTGAGTTTGACTACTTAAAGAGTGTGGAGATTGAAGAGAAGATCAACAAAGTAAGATGGTGTGCAACATCTAGTGGATCCCAGTTCATGCTTTCAACAAATGACAAGACGATAAAACTGTGGAAGGTTAAGGAATCCAAGGTGAAGAAAGTAAAAGAAATGACCCCTTGTCCACTGGCATCTTCGGATAATCTGCTTCTGGCAGAAAGGAGTTTCATTAGCAGAGAAGATAAACCACCTTTTCCTAATGGCTATCGTCGGGAATGGATAGAGAAGATGACTAAAAACATGTCATCTTCTGAAGACATGCATACGAAGGTTGCTGACATTGAAGACAATGCTCATACAAGATGCCGAAAGGTGTATGCCCATGCTCATGATTTTAATATTAACTCCATCTCAAATAATAGCGATGGTGAAACATTTCTTTCTGCGGATGACCTTAGAATAAACTTGTGGAATCTTGAGATCAGTGACCAGTGTTTCAATATCCTTGATATGAAGCCACCAAACATGGAGGACCTTACTGAGGTCTTAACAGCGGCTGAATTCCATCCAATTCATTGTAATCTGCTTGCATACAGCAGCTCAAGAGGTTTTATTCGTTTAGTTGACATGCGGCAGTCAGCGTTATGTGATCACAGTGCAAGAATATTACAAGATGGAGATTCCCATGTGCCAAAGTCATTTTTCACAGAAATTATTGCATCTATCTCTGATATAAAATTTTTTAAGGATGGGCGGCACATCTTAAGTCGCGACTACATGAATCTAAAGATCTGGGACATGCATATGGATTCTTCACCAGTTGCAATATACAAGATTCATGAACAACTGCGCCCTAAGTTATCTGAGTTGTATAACAATGATCGCATATTTGATAAATTCGGGTGCTGTTTCAGTGGAGATGGACTTCATTTTGCAACCGGGTCTTATAGCAACCTAGTGCGCATTTTTTCCCATGGAGATGGAAGTGAAGGAGCTACAATAGAAGCTAGCAAAACTCCCAACAGGAAGCCAATTCTCCAGACTGCTCCAAGGGCAAGGAGGTCATCCTTGAGCAACCTGGCACGAGGATTTTACCGGCATGGGCATGAAAATTCAAGCTCGGGCGGTAATGACAGTAGTTACGACCTAAGCTCCAAGATTCTACATTTGGCATGGCATCCAGAAACAAACTTGATTGCTAGTGCTGCTGGGAATAGCTTGTTCATGTATTATGCATAG

Protein Analysis

510

Amino Acids

57.81

Weight (kDa)

6.13

Isoelectric Point (pI)

50.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014737)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1253
AccII CGCG 1 cut(s) 1062
AciI CCGC 6 cut(s) 111, 737, 845, 922, 1045, 1416
AclWI GGATC 2 cut(s) 375, 388
AcoI YGGCCR 1 cut(s) 163
AcsI RAATTY 6 cut(s) 47, 269, 851, 1028, 1187, 1402
AcuI CTGAAG 1 cut(s) 624
AfiI CCNNNNNNNGG 1 cut(s) 832
AflII CTTAAG 1 cut(s) 1054
AflIII ACRYGT 1 cut(s) 591
AgsI TTSAA 5 cut(s) 338, 399, 635, 790, 1407
AhdI GACNNNNNGTC 1 cut(s) 471
AjiI CACGTC 1 cut(s) 252
AjnI CCWGG 1 cut(s) 1368
AleI CACNNNNGTG 1 cut(s) 96
AluBI AGCT 8 cut(s) 12, 74, 891, 1286, 1298, 1410, 1443, 1509
AluI AGCT 8 cut(s) 12, 74, 891, 1286, 1298, 1410, 1443, 1509
Alw21I GWGCWC 2 cut(s) 14, 76
AlwI GGATC 2 cut(s) 375, 388
AlwNI CAGNNNCTG 1 cut(s) 848
Ama87I CYCGRG 1 cut(s) 1411
AoxI GGCC 3 cut(s) 16, 24, 163
ApeKI GCWGC 2 cut(s) 888, 1496
ApoI RAATTY 6 cut(s) 47, 269, 851, 1028, 1187, 1402
Asp700I GAANNNNTTC 2 cut(s) 87, 726
AspLEI GCGC 2 cut(s) 1143, 1254
AspS9I GGNCC 3 cut(s) 17, 25, 823
AsuC2I CCSGG 2 cut(s) 78, 1231
AsuHPI GGTGA 5 cut(s) 110, 146, 457, 731, 1098
AsuNHI GCTAGC 1 cut(s) 1298
AvaI CYCGRG 1 cut(s) 1411
AvaII GGWCC 1 cut(s) 823
BamHI GGATCC 1 cut(s) 380
BanII GRGCYC 2 cut(s) 14, 76
BauI CACGAG 1 cut(s) 1374
BbsI GAAGAC 4 cut(s) 52, 90, 612, 642
Bbv12I GWGCWC 2 cut(s) 14, 76
BbvI GCAGC 2 cut(s) 900, 1483
BciT130I CCWGG 1 cut(s) 1370
BclI TGATCA 1 cut(s) 940
BcnI CCSGG 2 cut(s) 78, 1231
BfaI CTAG 4 cut(s) 375, 1247, 1299, 1491
BfrI CTTAAG 1 cut(s) 1054
BglII AGATCT 1 cut(s) 1080
BisI GCNGC 5 cut(s) 846, 889, 923, 1046, 1497
BlsI GCNGC 5 cut(s) 847, 890, 924, 1047, 1498
Bme1390I CCNGG 3 cut(s) 78, 1231, 1370
Bme18I GGWCC 1 cut(s) 823
BmeRI GACNNNNNGTC 1 cut(s) 471
BmeT110I CYCGRG 1 cut(s) 1411
BmgBI CACGTC 1 cut(s) 252
BmgT120I GGNCC 3 cut(s) 17, 25, 823
BmiI GGNNCC 2 cut(s) 27, 382
BmrFI CCNGG 3 cut(s) 78, 1231, 1370
BmrI ACTGGG 1 cut(s) 379
BmsI GCATC 5 cut(s) 271, 491, 644, 1019, 1477
BmtI GCTAGC 1 cut(s) 1302
BmuI ACTGGG 1 cut(s) 379
BpiI GAAGAC 4 cut(s) 52, 90, 612, 642
BpmI CTGGAG 1 cut(s) 1313
Bpu10I CCTNAGC 1 cut(s) 1439
BpuEI CTTGAG 3 cut(s) 788, 877, 1381
BpuMI CCSGG 2 cut(s) 78, 1231
BsaJI CCNNGG 3 cut(s) 441, 1264, 1340
BsaXI ACNNNNNCTCC 2 cut(s) 1427, 1457
Bsc4I CCNNNNNNNGG 1 cut(s) 832
Bse118I RCCGGY 1 cut(s) 1386
Bse1I ACTGG 4 cut(s) 385, 483, 781, 1109
BseBI CCWGG 1 cut(s) 1370
BseDI CCNNGG 3 cut(s) 441, 1264, 1340
BseGI GGATG 7 cut(s) 196, 262, 745, 856, 1045, 1355, 1468
BseLI CCNNNNNNNGG 1 cut(s) 832
BseMII CTCAG 5 cut(s) 68, 276, 297, 822, 1146
BseNI ACTGG 4 cut(s) 385, 483, 781, 1109
BseXI GCAGC 2 cut(s) 900, 1483
BseYI CCCAGC 2 cut(s) 258, 1499
Bsh1236I CGCG 1 cut(s) 1062
BshFI GGCC 3 cut(s) 18, 26, 165
BsiHKAI GWGCWC 2 cut(s) 14, 76
BsiHKCI CYCGRG 1 cut(s) 1411
BsiSI CCGG 4 cut(s) 23, 78, 1230, 1387
BslFI GGGAC 1 cut(s) 1100
BslI CCNNNNNNNGG 1 cut(s) 832
BsmFI GGGAC 1 cut(s) 1100
BsnI GGCC 3 cut(s) 18, 26, 165
BsoBI CYCGRG 1 cut(s) 1411
Bsp1286I GDGCHC 2 cut(s) 14, 76
Bsp143I GATC 7 cut(s) 154, 345, 380, 771, 940, 1080, 1171
Bsp19I CCATGG 1 cut(s) 1264
Bsp68I TCGCGA 1 cut(s) 1062
BspACI CCGC 6 cut(s) 111, 737, 845, 922, 1045, 1416
BspANI GGCC 3 cut(s) 18, 26, 165
BspCNI CTCAG 5 cut(s) 67, 277, 298, 823, 1147
BspFNI CGCG 1 cut(s) 1062
BspHI TCATGA 3 cut(s) 298, 679, 1129
BspLI GGNNCC 2 cut(s) 27, 382
BspOI GCTAGC 1 cut(s) 1302
BspPI GGATC 2 cut(s) 375, 388
BspTI CTTAAG 1 cut(s) 1054
BsrFI RCCGGY 1 cut(s) 1386
BsrI ACTGG 4 cut(s) 385, 483, 781, 1109
BssAI RCCGGY 1 cut(s) 1386
BssECI CCNNGG 3 cut(s) 441, 1264, 1340
BssMI GATC 7 cut(s) 154, 345, 380, 771, 940, 1080, 1171
BssSI CACGAG 1 cut(s) 1374
BssT1I CCWWGG 3 cut(s) 441, 1264, 1340
Bst2BI CACGAG 1 cut(s) 1374
Bst2UI CCWGG 1 cut(s) 1370
Bst4CI ACNGT 3 cut(s) 423, 947, 1427
Bst6I CTCTTC 1 cut(s) 333
BstAFI CTTAAG 1 cut(s) 1054
BstC8I GCNNGC 2 cut(s) 879, 1300
BstDEI CTNAG 8 cut(s) 54, 285, 306, 746, 831, 1146, 1155, 1439
BstDSI CCRYGG 1 cut(s) 1264
BstENI CCTNNNNNAGG 1 cut(s) 830
BstF5I GGATG 7 cut(s) 196, 262, 745, 856, 1045, 1355, 1468
BstFNI CGCG 1 cut(s) 1062
BstHHI GCGC 2 cut(s) 1143, 1254
BstKTI GATC 7 cut(s) 157, 348, 383, 774, 943, 1083, 1174
BstMBI GATC 7 cut(s) 154, 345, 380, 771, 940, 1080, 1171
BstMWI GCNNNNNNNGC 2 cut(s) 1343, 1496
BstNI CCWGG 1 cut(s) 1370
BstNSI RCATGY 4 cut(s) 595, 613, 922, 1093
BstSCI CCNGG 3 cut(s) 76, 1229, 1368
BstUI CGCG 1 cut(s) 1062
BstV1I GCAGC 2 cut(s) 900, 1483
BstV2I GAAGAC 4 cut(s) 52, 90, 612, 642
BstX2I RGATCY 2 cut(s) 380, 1080
BstXI CCANNNNNNTGG 1 cut(s) 1271
BstYI RGATCY 2 cut(s) 380, 1080
BsuRI GGCC 3 cut(s) 18, 26, 165
BtgI CCRYGG 1 cut(s) 1264
BtgZI GCGATG 1 cut(s) 729
BtrI CACGTC 1 cut(s) 252
BtsCI GGATG 7 cut(s) 196, 262, 745, 856, 1045, 1355, 1468
BtsIMutI CAGTG 5 cut(s) 476, 781, 788, 952, 1210
BtuMI TCGCGA 1 cut(s) 1062
Cac8I GCNNGC 2 cut(s) 879, 1300
CaiI CAGNNNCTG 1 cut(s) 848
CciI TCATGA 3 cut(s) 298, 679, 1129
CfoI GCGC 2 cut(s) 1143, 1254
Cfr10I RCCGGY 1 cut(s) 1386
Cfr13I GGNCC 3 cut(s) 17, 25, 823
DdeI CTNAG 8 cut(s) 54, 285, 306, 746, 831, 1146, 1155, 1439
DpnI GATC 7 cut(s) 156, 347, 382, 773, 942, 1082, 1173
DpnII GATC 7 cut(s) 154, 345, 380, 771, 940, 1080, 1171
DraI TTTAAA 1 cut(s) 207
DriI GACNNNNNGTC 1 cut(s) 471
EaeI YGGCCR 1 cut(s) 163
Eam1104I CTCTTC 1 cut(s) 333
Eam1105I GACNNNNNGTC 1 cut(s) 471
EarI CTCTTC 1 cut(s) 333
Ecl136II GAGCTC 2 cut(s) 12, 74
Eco130I CCWWGG 3 cut(s) 441, 1264, 1340
Eco24I GRGCYC 2 cut(s) 14, 76
Eco32I GATATC 1 cut(s) 108
Eco47I GGWCC 1 cut(s) 823
Eco53kI GAGCTC 2 cut(s) 12, 74
Eco57I CTGAAG 1 cut(s) 624
Eco88I CYCGRG 1 cut(s) 1411
EcoICRI GAGCTC 2 cut(s) 12, 74
EcoNI CCTNNNNNAGG 1 cut(s) 830
EcoO109I RGGNCCY 1 cut(s) 823
EcoRI GAATTC 1 cut(s) 851
EcoRII CCWGG 1 cut(s) 1368
EcoRV GATATC 1 cut(s) 108
EcoT14I CCWWGG 3 cut(s) 441, 1264, 1340
EcoT22I ATGCAT 3 cut(s) 615, 1095, 1528
EcoT38I GRGCYC 2 cut(s) 14, 76
ErhI CCWWGG 3 cut(s) 441, 1264, 1340
FaqI GGGAC 1 cut(s) 1100
FauNDI CATATG 1 cut(s) 1095
FbaI TGATCA 1 cut(s) 940
Fnu4HI GCNGC 5 cut(s) 846, 889, 923, 1046, 1497
FokI GGATG 7 cut(s) 203, 249, 752, 843, 1052, 1342, 1455
FriOI GRGCYC 2 cut(s) 14, 76
Fsp4HI GCNGC 5 cut(s) 846, 889, 923, 1046, 1497
FspAI RTGCGCAY 1 cut(s) 1253
FspBI CTAG 4 cut(s) 375, 1247, 1299, 1491
FspI TGCGCA 1 cut(s) 1253
GlaI GCGC 2 cut(s) 1142, 1253
GluI GCNGC 5 cut(s) 846, 889, 923, 1046, 1497
GsaI CCCAGC 2 cut(s) 262, 1503
GsuI CTGGAG 1 cut(s) 1313
HaeIII GGCC 3 cut(s) 18, 26, 165
HapII CCGG 4 cut(s) 23, 78, 1230, 1387
HhaI GCGC 2 cut(s) 1143, 1254
Hin6I GCGC 2 cut(s) 1141, 1252
HinP1I GCGC 2 cut(s) 1141, 1252
HincII GTYRAC 1 cut(s) 916
HindII GTYRAC 1 cut(s) 916
HinfI GANTC 9 cut(s) 120, 295, 437, 763, 971, 1072, 1100, 1126, 1450
HpaII CCGG 4 cut(s) 23, 78, 1230, 1387
HphI GGTGA 5 cut(s) 110, 146, 457, 731, 1098
Hpy166II GTNNAC 3 cut(s) 255, 476, 916
Hpy188I TCNGA 5 cut(s) 294, 490, 604, 1021, 1156
Hpy8I GTNNAC 3 cut(s) 255, 476, 916
Hpy99I CGWCG 1 cut(s) 564
HpyAV CCTTC 5 cut(s) 98, 181, 421, 613, 1274
HpyCH4III ACNGT 3 cut(s) 423, 947, 1427
HpyCH4IV ACGT 1 cut(s) 251
HpyCH4V TGCA 9 cut(s) 368, 613, 881, 950, 1010, 1093, 1115, 1226, 1526
HpyF10VI GCNNNNNNNGC 2 cut(s) 1343, 1496
HpyF3I CTNAG 8 cut(s) 54, 285, 306, 746, 831, 1146, 1155, 1439
HpySE526I ACGT 1 cut(s) 251
HspAI GCGC 2 cut(s) 1141, 1252
Ksp22I TGATCA 1 cut(s) 940
Kzo9I GATC 7 cut(s) 154, 345, 380, 771, 940, 1080, 1171
LmnI GCTCC 5 cut(s) 79, 235, 1283, 1342, 1448
Lsp1109I GCAGC 2 cut(s) 900, 1483
LweI GCATC 5 cut(s) 271, 491, 644, 1019, 1477
MaeI CTAG 4 cut(s) 375, 1247, 1299, 1491
MaeII ACGT 1 cut(s) 251
MaeIII GTNAC 2 cut(s) 776, 1430
MalI GATC 7 cut(s) 156, 347, 382, 773, 942, 1082, 1173
MboI GATC 7 cut(s) 154, 345, 380, 771, 940, 1080, 1171
MfeI CAATTG 1 cut(s) 114
MflI RGATCY 2 cut(s) 380, 1080
MhlI GDGCHC 2 cut(s) 14, 76
MlyI GAGTC 1 cut(s) 304
MmeI TCCRAC 1 cut(s) 222
MnlI CCTC 9 cut(s) 30, 39, 177, 231, 814, 826, 890, 1344, 1370
Mph1103I ATGCAT 3 cut(s) 615, 1095, 1528
MroXI GAANNNNTTC 2 cut(s) 87, 726
MseI TTAA 9 cut(s) 206, 279, 320, 432, 687, 693, 839, 1035, 1055
MslI CAYNNNNRTG 5 cut(s) 96, 678, 1094, 1269, 1395
MspA1I CMGCKG 1 cut(s) 845
MspCI CTTAAG 1 cut(s) 1054
MspI CCGG 4 cut(s) 23, 78, 1230, 1387
MspR9I CCNGG 3 cut(s) 78, 1231, 1370
MunI CAATTG 1 cut(s) 114
MvaI CCWGG 1 cut(s) 1370
MvnI CGCG 1 cut(s) 1062
MwoI GCNNNNNNNGC 2 cut(s) 1343, 1496
NciI CCSGG 2 cut(s) 78, 1231
NcoI CCATGG 1 cut(s) 1264
NdeI CATATG 1 cut(s) 1095
NdeII GATC 7 cut(s) 154, 345, 380, 771, 940, 1080, 1171
NheI GCTAGC 1 cut(s) 1298
NlaIV GGNNCC 2 cut(s) 27, 382
NmuCI GTSAC 1 cut(s) 776
NruI TCGCGA 1 cut(s) 1062
NsbI TGCGCA 1 cut(s) 1253
NsiI ATGCAT 3 cut(s) 615, 1095, 1528
NspI RCATGY 4 cut(s) 595, 613, 922, 1093
OliI CACNNNNGTG 1 cut(s) 96
PagI TCATGA 3 cut(s) 298, 679, 1129
PciI ACATGT 1 cut(s) 591
PcsI WCGNNNNNNNCGW 1 cut(s) 163
PdmI GAANNNNTTC 2 cut(s) 87, 726
PfeI GAWTC 8 cut(s) 120, 437, 763, 971, 1072, 1100, 1126, 1450
PfoI TCCNGGA 1 cut(s) 76
PkrI GCNGC 5 cut(s) 847, 890, 924, 1047, 1498
PleI GAGTC 1 cut(s) 303
PpsI GAGTC 1 cut(s) 303
PpuMI RGGWCCY 1 cut(s) 823
PscI ACATGT 1 cut(s) 591
Psp124BI GAGCTC 2 cut(s) 14, 76
Psp5II RGGWCCY 1 cut(s) 823
Psp6I CCWGG 1 cut(s) 1368
PspFI CCCAGC 2 cut(s) 258, 1499
PspGI CCWGG 1 cut(s) 1368
PspN4I GGNNCC 2 cut(s) 27, 382
PspPI GGNCC 3 cut(s) 17, 25, 823
PspPPI RGGWCCY 1 cut(s) 823
PstNI CAGNNNCTG 1 cut(s) 848
PsuI RGATCY 2 cut(s) 380, 1080
RruI TCGCGA 1 cut(s) 1062
RseI CAYNNNNRTG 5 cut(s) 96, 678, 1094, 1269, 1395
SacI GAGCTC 2 cut(s) 14, 76
SaqAI TTAA 9 cut(s) 206, 279, 320, 432, 687, 693, 839, 1035, 1055
SatI GCNGC 5 cut(s) 846, 889, 923, 1046, 1497
Sau3AI GATC 7 cut(s) 154, 345, 380, 771, 940, 1080, 1171
Sau96I GGNCC 3 cut(s) 17, 25, 823
SchI GAGTC 1 cut(s) 304
ScrFI CCNGG 3 cut(s) 78, 1231, 1370
SduI GDGCHC 2 cut(s) 14, 76
SfaNI GCATC 5 cut(s) 271, 491, 644, 1019, 1477
SinI GGWCC 1 cut(s) 823
SmiMI CAYNNNNRTG 5 cut(s) 96, 678, 1094, 1269, 1395
SmlI CTYRAG 4 cut(s) 767, 892, 1054, 1360
SmoI CTYRAG 4 cut(s) 767, 892, 1054, 1360
SsiI CCGC 6 cut(s) 111, 737, 845, 922, 1045, 1416
SspI AATATT 2 cut(s) 691, 957
SspMI CTAG 4 cut(s) 375, 1247, 1299, 1491
SstI GAGCTC 2 cut(s) 14, 76
StyD4I CCNGG 3 cut(s) 76, 1229, 1368
StyI CCWWGG 3 cut(s) 441, 1264, 1340
TaaI ACNGT 3 cut(s) 423, 947, 1427
TaiI ACGT 1 cut(s) 254
TaqI TCGA 2 cut(s) 123, 180
TauI GCSGC 3 cut(s) 848, 925, 1048
TfiI GAWTC 8 cut(s) 120, 437, 763, 971, 1072, 1100, 1126, 1450
Tru1I TTAA 9 cut(s) 206, 279, 320, 432, 687, 693, 839, 1035, 1055
Tru9I TTAA 9 cut(s) 206, 279, 320, 432, 687, 693, 839, 1035, 1055
TscAI CASTG 5 cut(s) 483, 781, 788, 952, 1210
TseFI GTSAC 1 cut(s) 776
TseI GCWGC 2 cut(s) 888, 1496
Tsp45I GTSAC 1 cut(s) 776
TspRI CASTG 5 cut(s) 483, 781, 788, 952, 1210
Vha464I CTTAAG 1 cut(s) 1054
VpaK11BI GGWCC 1 cut(s) 823
XagI CCTNNNNNAGG 1 cut(s) 830
XapI RAATTY 6 cut(s) 47, 269, 851, 1028, 1187, 1402
XceI RCATGY 4 cut(s) 595, 613, 922, 1093
XmnI GAANNNNTTC 2 cut(s) 87, 726
XspI CTAG 4 cut(s) 375, 1247, 1299, 1491
Zsp2I ATGCAT 3 cut(s) 615, 1095, 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.