Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0014737

Physical Location & Seq

Genomic Coordinates Forward (+)

10076544 .. 10081308

Gene Structure 4765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG135400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGACTCCCAGCTCCGACCACCCTCTCGACTGGAAGTTCTCTCAGGTTTTCGGCGAACGAGCTCCCGGTGATGAACTTCAGGAAGTTGATGTGATATCTGCTATTGGATTCGACAAGAGTGGTGATCACCTTGCCATTGGAGATCGAGGTGGCCGCTGCGTAATCTTCGAGAGGAAGGATGGGAAACATAATTTGGATGAGCACCGTTCTCGACTTGAACTGGAGCAGTTGGACGTTACGTCCACCCAGCATCCGGAATTCCAATTTAAGACCGAGTTTCAGAGTCATGAACCGGAGTTTGACTACTTGAAGAGTGTCGAAATTGAGGAGAAGATCAACAAAGTAAAGTGGTGCGCAACATCCAACGGATCCCAGTTTATTCTTTCAACAAATGACAAGACAATAAAACTGTGGAAGGTTAAGGAAGGTAAGGTGAAGAAGGTAAAAGAAATGAACCCTGGTCCACTTACGAGTTCAGATAATGTGCTTTTGTCTGAAAAGAGTTTCATCAGTCGAGAAGATAAACCTACTGTTGCTAATGGCTATCGTCAAGAATGGGCGGAGAAGATGGCTAATAACGTGTCCCAGTATCAAGACATACATGCCAAGGTTGACACCCGTGTTGCTGACGCTGAAGACACTGCCCAAACGAGATGCCGAAAGGTGTATGCTCATGCTCATGATTATAATATTCACTCCATCTCAAATAATAGCGATGGTGAAACTTTTCTTTCTGCAGATGACCTTAGAATAAACTTGTGGAATCTTGAGATCAGCGATCAATGTTTCAATATTATAGACATGAAGCCACCGAACATGGACGATCTGACTGAGGTCATAACATCGGCTGAATTCCATCCCGTTCATTGTAATCTGCTTGCATACAGCAGCTCAAGAGGTTTTATTCGCTTAGTTGACATGAGGCAGTCAGCTTTATGCGATAACAGTGCAAGAATATTACAAGATGGAGATTCAAATGCTTTAAAGTCATTTTTCACAGAAATTATTGCATCCATCTCTGACATCAAGTTTTCAAAGGATGGGCGGTACATCTTAAGTCGTGACTACATGAATCTAAAGCTCTGGGACGTGCATATGGATTCTTCACCAGTTGCAATATACAGGATTCATGAGCACCTGCGCCCTAAGTTATCTGAGTTGTATACTAATGATCGCATATTTGATAAATTTGGGTGCTGCTTCAGTGGAGATGGACTTCATTATGCAACTGGGTCTTATAGCAACCTAGTACGCATTTTCTCCCATGGTATTGGAGGTGAAGAAGGAACTACAATAGAAGCTAGCAAAACTCCTAACAGGAAGCCACTTCCGCGGGCTGCTCCAAGGGTTAGGAGGTCATCCTTGAGCAACCTGGCAAGAGGATTTTACCGGCATGGGCATGAAAATTCAAGCTCGGCCGGTAACGATATCAGTTATGACTTAAGCTCCAAACTATTACAGGTGGCATGGCATCCAGAAGCAAACTTAATTGCTAGTGCAGCTGGGAATAGCTTGTTCATGTATTATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0000278 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0010921 GO:0016311 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0030234 GO:0031323 GO:0031399 GO:0032268 GO:0032502 GO:0032991 GO:0035303 GO:0035304 GO:0036211 GO:0043170 GO:0043412 GO:0043666 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0060255 GO:0065007 GO:0065009 GO:0070262 GO:0071704 GO:0080090 GO:0098772 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04151 ko04152 ko04261 ko04390 ko04391 ko04530 ko04728 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04151 map04152 map04261 map04390 map04391 map04530 map04728 map05142 map05160 map05165

Pfam Domains

Protein Families

WD40

Protein Analysis

510

Amino Acids

57.72

Weight (kDa)

5.93

Isoelectric Point (pI)

38.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014737)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g05510
malus_domestica	MD14G1177400.v1.1
prunus_persica	Prupe.5G171300_v2.0.a1 Prupe.5G171300_v2.0.a1
pyrus_communis	pycom14g14830
rosa_chinensis	RchiOBHm_Chr7g0193311
rosa_laevigata	RLG00000004280 RLG00000014378
rosa_multiflora	Rmu_ssc0000092.1_g000013
rosa_roxburghii	Rroxscaffold_3G00262220 Rroxscaffold_4G00314280
rosa_rugosa	Rorug07G0008800
rosa_samantha	Rh7AG134400 Rh7BG135400 Rh7CG138500 Rh7DG136500
rosa_wichuraiana	Rw7G011500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	687
AarI	CACCTGC	1 cut(s)	1146
Acc16I	TGCGCA	1 cut(s)	355
Acc36I	ACCTGC	1 cut(s)	1146
AccI	GTMKAC	1 cut(s)	1163
AccII	CGCG	1 cut(s)	1333
AccIII	TCCGGA	1 cut(s)	253
AciI	CCGC	5 cut(s)	154, 560, 1045, 1331, 1333
AclWI	GGATC	2 cut(s)	363, 376
AcoI	YGGCCR	2 cut(s)	151, 1416
AcsI	RAATTY	4 cut(s)	257, 851, 1187, 1405
AcuI	CTGAAG	3 cut(s)	62, 654, 1186
AfaI	GTAC	2 cut(s)	1049, 1251
AfiI	CCNNNNNNNGG	1 cut(s)	253
AflII	CTTAAG	2 cut(s)	1054, 1441
AflIII	ACRYGT	1 cut(s)	579
AgsI	TTSAA	7 cut(s)	218, 310, 387, 790, 975, 1035, 1410
AhdI	GACNNNNNGTC	1 cut(s)	238
AjiI	CACGTC	1 cut(s)	1090
AjnI	CCWGG	2 cut(s)	457, 1371
AjuI	GAANNNNNNNTTGG	2 cut(s)	176, 208
Alw21I	GWGCWC	3 cut(s)	64, 204, 1137
AlwI	GGATC	2 cut(s)	363, 376
Aor13HI	TCCGGA	1 cut(s)	253
AoxI	GGCC	2 cut(s)	151, 1416
ApeKI	GCWGC	5 cut(s)	156, 888, 1197, 1337, 1499
ApoI	RAATTY	4 cut(s)	257, 851, 1187, 1405
Asp700I	GAANNNNTTC	1 cut(s)	726
AspLEI	GCGC	2 cut(s)	356, 1143
AspS9I	GGNCC	1 cut(s)	461
AsuC2I	CCSGG	1 cut(s)	66
AsuHPI	GGTGA	7 cut(s)	80, 119, 134, 445, 731, 1098, 1289
AsuNHI	GCTAGC	1 cut(s)	1301
AvaII	GGWCC	1 cut(s)	461
BamHI	GGATCC	1 cut(s)	368
BanII	GRGCYC	1 cut(s)	64
BbsI	GAAGAC	1 cut(s)	642
Bbv12I	GWGCWC	3 cut(s)	64, 204, 1137
BbvI	GCAGC	5 cut(s)	143, 900, 1184, 1324, 1511
BccI	CCATC	9 cut(s)	173, 562, 707, 710, 864, 959, 1022, 1034, 1205
BcgI	CGANNNNNNTGC	4 cut(s)	191, 225, 929, 963
BciT130I	CCWGG	2 cut(s)	459, 1373
BclI	TGATCA	1 cut(s)	124
BcnI	CCSGG	1 cut(s)	66
BfaI	CTAG	3 cut(s)	1247, 1302, 1494
BfmI	CTRYAG	1 cut(s)	735
BfrI	CTTAAG	2 cut(s)	1054, 1441
BfuAI	ACCTGC	1 cut(s)	1146
BisI	GCNGC	6 cut(s)	154, 157, 889, 1198, 1338, 1500
BlsI	GCNGC	6 cut(s)	155, 158, 890, 1199, 1339, 1501
Bme1390I	CCNGG	3 cut(s)	66, 459, 1373
Bme18I	GGWCC	1 cut(s)	461
BmeRI	GACNNNNNGTC	1 cut(s)	238
BmgBI	CACGTC	1 cut(s)	1090
BmgT120I	GGNCC	1 cut(s)	461
BmiI	GGNNCC	1 cut(s)	370
BmrFI	CCNGG	3 cut(s)	66, 459, 1373
BmrI	ACTGGG	3 cut(s)	367, 580, 1239
BmsI	GCATC	4 cut(s)	259, 644, 1019, 1480
BmtI	GCTAGC	1 cut(s)	1305
BmuI	ACTGGG	3 cut(s)	367, 580, 1239
BoxI	GACNNNNGTC	1 cut(s)	833
BpiI	GAAGAC	1 cut(s)	642
BpmI	CTGGAG	1 cut(s)	242
BpuEI	CTTGAG	3 cut(s)	788, 877, 1384
BpuMI	CCSGG	1 cut(s)	66
BsaJI	CCNNGG	5 cut(s)	457, 606, 1264, 1331, 1343
BsaWI	WCCGGW	2 cut(s)	253, 292
BsaXI	ACNNNNNCTCC	2 cut(s)	1430, 1460
Bsc4I	CCNNNNNNNGG	1 cut(s)	253
Bse118I	RCCGGY	2 cut(s)	1389, 1418
Bse1I	ACTGG	6 cut(s)	35, 225, 373, 586, 1109, 1234
BseAI	TCCGGA	1 cut(s)	253
BseBI	CCWGG	2 cut(s)	459, 1373
BseDI	CCNNGG	5 cut(s)	457, 606, 1264, 1331, 1343
BseGI	GGATG	9 cut(s)	184, 202, 250, 359, 856, 1010, 1045, 1358, 1471
BseLI	CCNNNNNNNGG	1 cut(s)	253
BseMII	CTCAG	3 cut(s)	56, 822, 1146
BseNI	ACTGG	6 cut(s)	35, 225, 373, 586, 1109, 1234
BseRI	GAGGAG	1 cut(s)	341
BseX3I	CGGCCG	1 cut(s)	1416
BseXI	GCAGC	5 cut(s)	143, 900, 1184, 1324, 1511
BseYI	CCCAGC	3 cut(s)	8, 246, 1502
BsgI	GTGCAG	1 cut(s)	1518
Bsh1236I	CGCG	1 cut(s)	1333
Bsh1285I	CGRYCG	1 cut(s)	1419
BshFI	GGCC	2 cut(s)	153, 1418
BsiEI	CGRYCG	1 cut(s)	1419
BsiHKAI	GWGCWC	3 cut(s)	64, 204, 1137
BsiSI	CCGG	5 cut(s)	66, 254, 293, 1390, 1419
BslFI	GGGAC	2 cut(s)	568, 1100
BslI	CCNNNNNNNGG	1 cut(s)	253
BsmFI	GGGAC	2 cut(s)	568, 1100
BsnI	GGCC	2 cut(s)	153, 1418
Bsp1286I	GDGCHC	3 cut(s)	64, 204, 1137
Bsp13I	TCCGGA	1 cut(s)	253
Bsp143I	GATC	8 cut(s)	124, 142, 333, 368, 771, 778, 823, 1171
Bsp19I	CCATGG	1 cut(s)	1264
BspACI	CCGC	5 cut(s)	154, 560, 1045, 1331, 1333
BspANI	GGCC	2 cut(s)	153, 1418
BspCNI	CTCAG	3 cut(s)	55, 823, 1147
BspEI	TCCGGA	1 cut(s)	253
BspFNI	CGCG	1 cut(s)	1333
BspHI	TCATGA	3 cut(s)	286, 679, 1129
BspLI	GGNNCC	1 cut(s)	370
BspMAI	CTGCAG	1 cut(s)	739
BspMI	ACCTGC	1 cut(s)	1146
BspOI	GCTAGC	1 cut(s)	1305
BspPI	GGATC	2 cut(s)	363, 376
BspTI	CTTAAG	2 cut(s)	1054, 1441
BsrFI	RCCGGY	2 cut(s)	1389, 1418
BsrI	ACTGG	6 cut(s)	35, 225, 373, 586, 1109, 1234
BssAI	RCCGGY	2 cut(s)	1389, 1418
BssECI	CCNNGG	5 cut(s)	457, 606, 1264, 1331, 1343
BssMI	GATC	8 cut(s)	124, 142, 333, 368, 771, 778, 823, 1171
BssNAI	GTATAC	1 cut(s)	1164
BssT1I	CCWWGG	3 cut(s)	606, 1264, 1343
Bst1107I	GTATAC	1 cut(s)	1164
Bst2UI	CCWGG	2 cut(s)	459, 1373
Bst4CI	ACNGT	4 cut(s)	206, 411, 532, 947
Bst6I	CTCTTC	1 cut(s)	305
BstAFI	CTTAAG	2 cut(s)	1054, 1441
BstC8I	GCNNGC	3 cut(s)	879, 1303, 1335
BstDEI	CTNAG	6 cut(s)	42, 746, 831, 910, 1146, 1155
BstDSI	CCRYGG	2 cut(s)	1264, 1331
BstF5I	GGATG	9 cut(s)	184, 202, 250, 359, 856, 1010, 1045, 1358, 1471
BstFNI	CGCG	1 cut(s)	1333
BstHHI	GCGC	2 cut(s)	356, 1143
BstKTI	GATC	8 cut(s)	127, 145, 336, 371, 774, 781, 826, 1174
BstMBI	GATC	8 cut(s)	124, 142, 333, 368, 771, 778, 823, 1171
BstMCI	CGRYCG	1 cut(s)	1419
BstMWI	GCNNNNNNNGC	2 cut(s)	1330, 1499
BstNI	CCWGG	2 cut(s)	459, 1373
BstNSI	RCATGY	1 cut(s)	605
BstPAI	GACNNNNGTC	1 cut(s)	833
BstSCI	CCNGG	3 cut(s)	64, 457, 1371
BstSFI	CTRYAG	1 cut(s)	735
BstUI	CGCG	1 cut(s)	1333
BstV1I	GCAGC	5 cut(s)	143, 900, 1184, 1324, 1511
BstV2I	GAAGAC	1 cut(s)	642
BstX2I	RGATCY	1 cut(s)	368
BstXI	CCANNNNNNTGG	1 cut(s)	1271
BstYI	RGATCY	1 cut(s)	368
BstZ17I	GTATAC	1 cut(s)	1164
BstZI	CGGCCG	1 cut(s)	1416
BsuRI	GGCC	2 cut(s)	153, 1418
BtgI	CCRYGG	2 cut(s)	1264, 1331
BtgZI	GCGATG	1 cut(s)	729
BtrI	CACGTC	1 cut(s)	1090
BtsCI	GGATG	9 cut(s)	184, 202, 250, 359, 856, 1010, 1045, 1358, 1471
BtsI	GCAGTG	1 cut(s)	639
BtsIMutI	CAGTG	3 cut(s)	639, 952, 1210
BveI	ACCTGC	1 cut(s)	1146
Cac8I	GCNNGC	3 cut(s)	879, 1303, 1335
CciI	TCATGA	3 cut(s)	286, 679, 1129
CfoI	GCGC	2 cut(s)	356, 1143
Cfr10I	RCCGGY	2 cut(s)	1389, 1418
Cfr13I	GGNCC	1 cut(s)	461
Cfr42I	CCGCGG	1 cut(s)	1334
CseI	GACGC	1 cut(s)	638
Csp6I	GTAC	2 cut(s)	1048, 1250
CviQI	GTAC	2 cut(s)	1048, 1250
DdeI	CTNAG	6 cut(s)	42, 746, 831, 910, 1146, 1155
DpnI	GATC	8 cut(s)	126, 144, 335, 370, 773, 780, 825, 1173
DpnII	GATC	8 cut(s)	124, 142, 333, 368, 771, 778, 823, 1171
DraI	TTTAAA	1 cut(s)	984
DriI	GACNNNNNGTC	1 cut(s)	238
EaeI	YGGCCR	2 cut(s)	151, 1416
EagI	CGGCCG	1 cut(s)	1416
Eam1104I	CTCTTC	1 cut(s)	305
Eam1105I	GACNNNNNGTC	1 cut(s)	238
EarI	CTCTTC	1 cut(s)	305
EciI	GGCGGA	1 cut(s)	575
Ecl136II	GAGCTC	1 cut(s)	62
EclXI	CGGCCG	1 cut(s)	1416
Eco130I	CCWWGG	3 cut(s)	606, 1264, 1343
Eco24I	GRGCYC	1 cut(s)	64
Eco32I	GATATC	2 cut(s)	96, 1429
Eco47I	GGWCC	1 cut(s)	461
Eco52I	CGGCCG	1 cut(s)	1416
Eco53kI	GAGCTC	1 cut(s)	62
Eco57I	CTGAAG	3 cut(s)	62, 654, 1186
EcoICRI	GAGCTC	1 cut(s)	62
EcoRI	GAATTC	2 cut(s)	257, 851
EcoRII	CCWGG	2 cut(s)	457, 1371
EcoRV	GATATC	2 cut(s)	96, 1429
EcoT14I	CCWWGG	3 cut(s)	606, 1264, 1343
EcoT22I	ATGCAT	1 cut(s)	1531
EcoT38I	GRGCYC	1 cut(s)	64
ErhI	CCWWGG	3 cut(s)	606, 1264, 1343
FaqI	GGGAC	2 cut(s)	568, 1100
FauI	CCCGC	1 cut(s)	1326
FauNDI	CATATG	1 cut(s)	1095
FbaI	TGATCA	1 cut(s)	124
FblI	GTMKAC	1 cut(s)	1163
Fnu4HI	GCNGC	6 cut(s)	154, 157, 889, 1198, 1338, 1500
FokI	GGATG	9 cut(s)	191, 209, 237, 346, 843, 997, 1052, 1345, 1458
FriOI	GRGCYC	1 cut(s)	64
Fsp4HI	GCNGC	6 cut(s)	154, 157, 889, 1198, 1338, 1500
FspBI	CTAG	3 cut(s)	1247, 1302, 1494
FspI	TGCGCA	1 cut(s)	355
GlaI	GCGC	2 cut(s)	355, 1142
GluI	GCNGC	6 cut(s)	154, 157, 889, 1198, 1338, 1500
GsaI	CCCAGC	3 cut(s)	12, 250, 1506
GsuI	CTGGAG	1 cut(s)	242
HaeIII	GGCC	2 cut(s)	153, 1418
HapII	CCGG	5 cut(s)	66, 254, 293, 1390, 1419
HgaI	GACGC	1 cut(s)	638
HhaI	GCGC	2 cut(s)	356, 1143
Hin6I	GCGC	2 cut(s)	354, 1141
HinP1I	GCGC	2 cut(s)	354, 1141
HincII	GTYRAC	2 cut(s)	613, 916
HindII	GTYRAC	2 cut(s)	613, 916
HinfI	GANTC	8 cut(s)	4, 108, 283, 763, 971, 1072, 1100, 1126
HpaII	CCGG	5 cut(s)	66, 254, 293, 1390, 1419
HphI	GGTGA	7 cut(s)	80, 119, 134, 445, 731, 1098, 1289
Hpy166II	GTNNAC	5 cut(s)	243, 464, 613, 916, 1164
Hpy188I	TCNGA	7 cut(s)	16, 282, 478, 496, 828, 1021, 1156
Hpy8I	GTNNAC	5 cut(s)	243, 464, 613, 916, 1164
HpyAV	CCTTC	5 cut(s)	169, 409, 419, 433, 1277
HpyCH4III	ACNGT	4 cut(s)	206, 411, 532, 947
HpyCH4IV	ACGT	4 cut(s)	234, 239, 579, 1089
HpyCH4V	TGCA	9 cut(s)	737, 881, 950, 1010, 1093, 1115, 1226, 1499, 1529
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1330, 1499
HpyF3I	CTNAG	6 cut(s)	42, 746, 831, 910, 1146, 1155
HpySE526I	ACGT	4 cut(s)	234, 239, 579, 1089
HspAI	GCGC	2 cut(s)	354, 1141
Kpn2I	TCCGGA	1 cut(s)	253
Ksp22I	TGATCA	1 cut(s)	124
KspI	CCGCGG	1 cut(s)	1334
Kzo9I	GATC	8 cut(s)	124, 142, 333, 368, 771, 778, 823, 1171
LmnI	GCTCC	5 cut(s)	17, 67, 223, 1345, 1451
Lsp1109I	GCAGC	5 cut(s)	143, 900, 1184, 1324, 1511
LweI	GCATC	4 cut(s)	259, 644, 1019, 1480
MaeI	CTAG	3 cut(s)	1247, 1302, 1494
MaeII	ACGT	4 cut(s)	234, 239, 579, 1089
MaeIII	GTNAC	3 cut(s)	235, 1061, 1421
MalI	GATC	8 cut(s)	126, 144, 335, 370, 773, 780, 825, 1173
MboI	GATC	8 cut(s)	124, 142, 333, 368, 771, 778, 823, 1171
MboII	GAAGA	9 cut(s)	157, 322, 343, 448, 530, 577, 647, 1095, 1292
MflI	RGATCY	1 cut(s)	368
MhlI	GDGCHC	3 cut(s)	64, 204, 1137
MluCI	AATT	9 cut(s)	190, 257, 263, 321, 851, 1002, 1187, 1405, 1488
MlyI	GAGTC	1 cut(s)	292
MmeI	TCCRAC	3 cut(s)	39, 210, 387
Mph1103I	ATGCAT	1 cut(s)	1531
MroI	TCCGGA	1 cut(s)	253
MroXI	GAANNNNTTC	1 cut(s)	726
MseI	TTAA	6 cut(s)	267, 420, 983, 1055, 1442, 1487
MslI	CAYNNNNRTG	2 cut(s)	678, 1398
MspA1I	CMGCKG	3 cut(s)	156, 1333, 1502
MspCI	CTTAAG	2 cut(s)	1054, 1441
MspI	CCGG	5 cut(s)	66, 254, 293, 1390, 1419
MspR9I	CCNGG	3 cut(s)	66, 459, 1373
MvaI	CCWGG	2 cut(s)	459, 1373
MvnI	CGCG	1 cut(s)	1333
MwoI	GCNNNNNNNGC	2 cut(s)	1330, 1499
NciI	CCSGG	1 cut(s)	66
NcoI	CCATGG	1 cut(s)	1264
NdeI	CATATG	1 cut(s)	1095
NdeII	GATC	8 cut(s)	124, 142, 333, 368, 771, 778, 823, 1171
NheI	GCTAGC	1 cut(s)	1301
NlaIV	GGNNCC	1 cut(s)	370
NmeAIII	GCCGAG	1 cut(s)	1394
NmuCI	GTSAC	1 cut(s)	1061
NsbI	TGCGCA	1 cut(s)	355
NsiI	ATGCAT	1 cut(s)	1531
NspI	RCATGY	1 cut(s)	605
PagI	TCATGA	3 cut(s)	286, 679, 1129
PaqCI	CACCTGC	1 cut(s)	1146
PdmI	GAANNNNTTC	1 cut(s)	726
PfeI	GAWTC	6 cut(s)	108, 763, 971, 1072, 1100, 1126
PkrI	GCNGC	6 cut(s)	155, 158, 890, 1199, 1339, 1501
PleI	GAGTC	1 cut(s)	291
PpsI	GAGTC	1 cut(s)	291
PshAI	GACNNNNGTC	1 cut(s)	833
PsiI	TTATAA	1 cut(s)	687
Psp124BI	GAGCTC	1 cut(s)	64
Psp6I	CCWGG	2 cut(s)	457, 1371
PspFI	CCCAGC	3 cut(s)	8, 246, 1502
PspGI	CCWGG	2 cut(s)	457, 1371
PspN4I	GGNNCC	1 cut(s)	370
PspPI	GGNCC	1 cut(s)	461
PstI	CTGCAG	1 cut(s)	739
PsuI	RGATCY	1 cut(s)	368
PvuII	CAGCTG	1 cut(s)	1502
RsaI	GTAC	2 cut(s)	1049, 1251
RsaNI	GTAC	2 cut(s)	1048, 1250
RseI	CAYNNNNRTG	2 cut(s)	678, 1398
SacI	GAGCTC	1 cut(s)	64
SacII	CCGCGG	1 cut(s)	1334
SaqAI	TTAA	6 cut(s)	267, 420, 983, 1055, 1442, 1487
SatI	GCNGC	6 cut(s)	154, 157, 889, 1198, 1338, 1500
Sau3AI	GATC	8 cut(s)	124, 142, 333, 368, 771, 778, 823, 1171
Sau96I	GGNCC	1 cut(s)	461
SchI	GAGTC	1 cut(s)	292
ScrFI	CCNGG	3 cut(s)	66, 459, 1373
SduI	GDGCHC	3 cut(s)	64, 204, 1137
SfaNI	GCATC	4 cut(s)	259, 644, 1019, 1480
SfcI	CTRYAG	1 cut(s)	735
Sfr303I	CCGCGG	1 cut(s)	1334
SgrBI	CCGCGG	1 cut(s)	1334
SinI	GGWCC	1 cut(s)	461
SmiMI	CAYNNNNRTG	2 cut(s)	678, 1398
SmlI	CTYRAG	5 cut(s)	767, 892, 1054, 1363, 1441
SmoI	CTYRAG	5 cut(s)	767, 892, 1054, 1363, 1441
Sse9I	AATT	9 cut(s)	190, 257, 263, 321, 851, 1002, 1187, 1405, 1488
SsiI	CCGC	5 cut(s)	154, 560, 1045, 1331, 1333
SspI	AATATT	3 cut(s)	691, 793, 957
SspMI	CTAG	3 cut(s)	1247, 1302, 1494
SstI	GAGCTC	1 cut(s)	64
StyD4I	CCNGG	3 cut(s)	64, 457, 1371
StyI	CCWWGG	3 cut(s)	606, 1264, 1343
TaaI	ACNGT	4 cut(s)	206, 411, 532, 947
TaiI	ACGT	4 cut(s)	237, 242, 582, 1092
TaqI	TCGA	7 cut(s)	27, 111, 145, 168, 211, 318, 514
TaqII	GACCGA	1 cut(s)	287
TasI	AATT	9 cut(s)	190, 257, 263, 321, 851, 1002, 1187, 1405, 1488
TauI	GCSGC	1 cut(s)	156
TfiI	GAWTC	6 cut(s)	108, 763, 971, 1072, 1100, 1126
Tru1I	TTAA	6 cut(s)	267, 420, 983, 1055, 1442, 1487
Tru9I	TTAA	6 cut(s)	267, 420, 983, 1055, 1442, 1487
TscAI	CASTG	3 cut(s)	646, 952, 1210
TseFI	GTSAC	1 cut(s)	1061
TseI	GCWGC	5 cut(s)	156, 888, 1197, 1337, 1499
Tsp45I	GTSAC	1 cut(s)	1061
TspGWI	ACGGA	1 cut(s)	381
TspRI	CASTG	3 cut(s)	646, 952, 1210
Vha464I	CTTAAG	2 cut(s)	1054, 1441
VpaK11BI	GGWCC	1 cut(s)	461
XapI	RAATTY	4 cut(s)	257, 851, 1187, 1405
XceI	RCATGY	1 cut(s)	605
XmiI	GTMKAC	1 cut(s)	1163
XmnI	GAANNNNTTC	1 cut(s)	726
XspI	CTAG	3 cut(s)	1247, 1302, 1494
Zsp2I	ATGCAT	1 cut(s)	1531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.