Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0014737

Physical Location & Seq

Genomic Coordinates Forward (+)

11676006 .. 11680481

Gene Structure 4476 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17285

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGACTCCCAGCTCCGACCACCCTCTCGACTGGAAGTTCTCTCAGGTTTTCGGCGAACGAGCTCCCGGTGATGAACTTCTTCAGGAAGTTGATGTGATATCTGCTATTGGATTCGACAAGAGTGGTGATCACCTTGCCATTGGAGATCGAGGTGGCCGCTGCGTAATCTTCGAGAGGAAGCATGGGAAACATAATCTGGATGAGCACCGCTCTCGACTTGAACTGGAGCAGTTGGACGTTACGTCCACCCAGCATCCGGAATTCCAATTCAAGACCGAGTTTCAGAGTCACGAACCGGAGTTTGACTACTTGAAAAGTGTCGAAATTGAGGAGAAGATCAACAAAGTAAAGTGGTGCGCAACATCCAACGGATCCCAGTTTATTCTTTCAACAAATGACAAGACAATAAAACTGTGGAAGGTTAAGGAAGGTAAGGTGAAGAAAGTAAAAGAAATGAACCCTGGTCCACTTACAAGTTCAGATAATGTGCTTTTGTCTGAAAAGAGTTTCATCAGTAGAGAAGATAAACCTACTGTTCCTAATGGCTATCGTCAAGAATGGGCGGAGAAGATGGCTAATAGCGTGTCCCAGTATCAAGACATACATGCCAAGGTTGCTGACGCTGAAGACACTGCCCAAACGAGATGCCGAAAGGTGTATGCTCATGCTCATGATTATAATATTCACTCCATCTCAAATAATAGCGATGGTGAAACTTTTCTTTCTGCAGATGACCTTAGAATAAACTTGTGGAATCTTGAGATCAGCGATCAATGTTTCAATATTATAGACATGAAGCCACCAAACATGGACGATCTGACTGAGGTCATAACATCGGCTGAATTCCATCCCGTTCATTGTAATCTGCTTGCATACAGCAGCTCAAGAGGTTTTATTCGCTTAGTTGACATGAGGCAGTCAGCTTTATGCGATAACAGTGCAAGAATATTACAAGATGGAGATTCAAATGCTTTAAAGTCATTTTTCACAGAAATTATTGCATCCATCTCTGACATCAAGTTTTCAAAGGATGGGCGGTACATCTTAAGTCGTGACTACATGAATCTAAAGCTCTGGGACGTGCATATGGATTCTTCACCAGTTGCAATATACAGGATTCATGAGCACCTGCGCCCTAAGTTATCTGAGTTGTATACTAATGATCGCATATTTGATAAATTTGGGTGCTGCTTCAGTGGAGATGGACTTCATTATGCAACTGGGTCTTATAGCAACCTAGTACGCATTTTCTCCCATGGTATTGGAGGTGAAGAAGGAACTACAATAGAAGCTAGCAAAACTCCTAACAGGAAGCCACTTCCGCGGGCTGCTCCAAGGGTTAGGAGGTCATCCTTGAGCAACCTGGCAAGAGGATTTTACCGGCATGGGCATGAAAATTCAAGCTCGGCCGGTAACGATATCAGTTATGACTTAAGCTCCAAGCTATTACAGGTGGCATGGCATCCAGAAGCAAACTTAATTGCTAGTGCAGCTGGGAATAGCTTGTTCATGTATTATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0000278 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0010921 GO:0016311 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0030234 GO:0031323 GO:0031399 GO:0032268 GO:0032502 GO:0032991 GO:0035303 GO:0035304 GO:0036211 GO:0043170 GO:0043412 GO:0043666 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0060255 GO:0065007 GO:0065009 GO:0070262 GO:0071704 GO:0080090 GO:0098772 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04151 ko04152 ko04261 ko04390 ko04391 ko04530 ko04728 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04151 map04152 map04261 map04390 map04391 map04530 map04728 map05142 map05160 map05165

Pfam Domains

Protein Families

WD40

Protein Analysis

507

Amino Acids

57.38

Weight (kDa)

6.03

Isoelectric Point (pI)

39.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	187 - 361	1.8e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014737)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g05510
malus_domestica	MD14G1177400.v1.1
prunus_persica	Prupe.5G171300_v2.0.a1 Prupe.5G171300_v2.0.a1
pyrus_communis	pycom14g14830
rosa_chinensis	RchiOBHm_Chr7g0193311
rosa_laevigata	RLG00000004280 RLG00000014378
rosa_multiflora	Rmu_ssc0000092.1_g000013
rosa_roxburghii	Rroxscaffold_3G00262220 Rroxscaffold_4G00314280
rosa_rugosa	Rorug07G0008800
rosa_samantha	Rh7AG134400 Rh7BG135400 Rh7CG138500 Rh7DG136500
rosa_wichuraiana	Rw7G011500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	678
AarI	CACCTGC	1 cut(s)	1137
Acc16I	TGCGCA	1 cut(s)	358
Acc36I	ACCTGC	1 cut(s)	1137
AccBSI	CCGCTC	1 cut(s)	210
AccI	GTMKAC	1 cut(s)	1154
AccII	CGCG	1 cut(s)	1324
AccIII	TCCGGA	1 cut(s)	256
AciI	CCGC	6 cut(s)	157, 208, 563, 1036, 1322, 1324
AclWI	GGATC	2 cut(s)	366, 379
AcoI	YGGCCR	2 cut(s)	154, 1407
AcsI	RAATTY	4 cut(s)	260, 842, 1178, 1396
AcuI	CTGAAG	3 cut(s)	65, 645, 1177
AfaI	GTAC	2 cut(s)	1040, 1242
AfiI	CCNNNNNNNGG	1 cut(s)	256
AflII	CTTAAG	2 cut(s)	1045, 1432
AgsI	TTSAA	8 cut(s)	221, 271, 313, 390, 781, 966, 1026, 1401
AhdI	GACNNNNNGTC	1 cut(s)	241
AjiI	CACGTC	1 cut(s)	1081
AjnI	CCWGG	2 cut(s)	460, 1362
Alw21I	GWGCWC	3 cut(s)	64, 207, 1128
AlwI	GGATC	2 cut(s)	366, 379
Aor13HI	TCCGGA	1 cut(s)	256
AoxI	GGCC	2 cut(s)	154, 1407
ApeKI	GCWGC	5 cut(s)	159, 879, 1188, 1328, 1490
ApoI	RAATTY	4 cut(s)	260, 842, 1178, 1396
Asp700I	GAANNNNTTC	2 cut(s)	78, 717
AspLEI	GCGC	2 cut(s)	359, 1134
AspS9I	GGNCC	1 cut(s)	464
AsuC2I	CCSGG	1 cut(s)	66
AsuHPI	GGTGA	7 cut(s)	80, 122, 137, 448, 722, 1089, 1280
AsuNHI	GCTAGC	1 cut(s)	1292
AvaII	GGWCC	1 cut(s)	464
BamHI	GGATCC	1 cut(s)	371
BanII	GRGCYC	1 cut(s)	64
BbsI	GAAGAC	1 cut(s)	633
Bbv12I	GWGCWC	3 cut(s)	64, 207, 1128
BbvI	GCAGC	5 cut(s)	146, 891, 1175, 1315, 1502
BccI	CCATC	8 cut(s)	565, 698, 701, 855, 950, 1013, 1025, 1196
BcgI	CGANNNNNNTGC	4 cut(s)	194, 228, 920, 954
BciT130I	CCWGG	2 cut(s)	462, 1364
BclI	TGATCA	1 cut(s)	127
BcnI	CCSGG	1 cut(s)	66
BfaI	CTAG	3 cut(s)	1238, 1293, 1485
BfmI	CTRYAG	1 cut(s)	726
BfrI	CTTAAG	2 cut(s)	1045, 1432
BfuAI	ACCTGC	1 cut(s)	1137
BisI	GCNGC	6 cut(s)	157, 160, 880, 1189, 1329, 1491
BlsI	GCNGC	6 cut(s)	158, 161, 881, 1190, 1330, 1492
Bme1390I	CCNGG	3 cut(s)	66, 462, 1364
Bme18I	GGWCC	1 cut(s)	464
BmeRI	GACNNNNNGTC	1 cut(s)	241
BmgBI	CACGTC	1 cut(s)	1081
BmgT120I	GGNCC	1 cut(s)	464
BmiI	GGNNCC	1 cut(s)	373
BmrFI	CCNGG	3 cut(s)	66, 462, 1364
BmrI	ACTGGG	3 cut(s)	370, 583, 1230
BmsI	GCATC	4 cut(s)	262, 635, 1010, 1471
BmtI	GCTAGC	1 cut(s)	1296
BmuI	ACTGGG	3 cut(s)	370, 583, 1230
BoxI	GACNNNNGTC	1 cut(s)	824
BpiI	GAAGAC	1 cut(s)	633
BplI	GAGNNNNNCTC	2 cut(s)	194, 226
BpmI	CTGGAG	1 cut(s)	245
BpuEI	CTTGAG	3 cut(s)	779, 868, 1375
BpuMI	CCSGG	1 cut(s)	66
BsaJI	CCNNGG	5 cut(s)	460, 609, 1255, 1322, 1334
BsaWI	WCCGGW	2 cut(s)	256, 295
BsaXI	ACNNNNNCTCC	2 cut(s)	1421, 1451
Bsc4I	CCNNNNNNNGG	1 cut(s)	256
Bse118I	RCCGGY	2 cut(s)	1380, 1409
Bse1I	ACTGG	6 cut(s)	35, 228, 376, 589, 1100, 1225
BseAI	TCCGGA	1 cut(s)	256
BseBI	CCWGG	2 cut(s)	462, 1364
BseDI	CCNNGG	5 cut(s)	460, 609, 1255, 1322, 1334
BseGI	GGATG	8 cut(s)	205, 253, 362, 847, 1001, 1036, 1349, 1462
BseLI	CCNNNNNNNGG	1 cut(s)	256
BseMII	CTCAG	3 cut(s)	56, 813, 1137
BseNI	ACTGG	6 cut(s)	35, 228, 376, 589, 1100, 1225
BseRI	GAGGAG	1 cut(s)	344
BseX3I	CGGCCG	1 cut(s)	1407
BseXI	GCAGC	5 cut(s)	146, 891, 1175, 1315, 1502
BseYI	CCCAGC	3 cut(s)	8, 249, 1493
BsgI	GTGCAG	1 cut(s)	1509
Bsh1236I	CGCG	1 cut(s)	1324
Bsh1285I	CGRYCG	1 cut(s)	1410
BshFI	GGCC	2 cut(s)	156, 1409
BsiEI	CGRYCG	1 cut(s)	1410
BsiHKAI	GWGCWC	3 cut(s)	64, 207, 1128
BsiSI	CCGG	5 cut(s)	66, 257, 296, 1381, 1410
BslFI	GGGAC	2 cut(s)	571, 1091
BslI	CCNNNNNNNGG	1 cut(s)	256
BsmFI	GGGAC	2 cut(s)	571, 1091
BsnI	GGCC	2 cut(s)	156, 1409
Bsp1286I	GDGCHC	3 cut(s)	64, 207, 1128
Bsp13I	TCCGGA	1 cut(s)	256
Bsp143I	GATC	8 cut(s)	127, 145, 336, 371, 762, 769, 814, 1162
Bsp19I	CCATGG	1 cut(s)	1255
BspACI	CCGC	6 cut(s)	157, 208, 563, 1036, 1322, 1324
BspANI	GGCC	2 cut(s)	156, 1409
BspCNI	CTCAG	3 cut(s)	55, 814, 1138
BspEI	TCCGGA	1 cut(s)	256
BspFNI	CGCG	1 cut(s)	1324
BspHI	TCATGA	2 cut(s)	670, 1120
BspLI	GGNNCC	1 cut(s)	373
BspMAI	CTGCAG	1 cut(s)	730
BspMI	ACCTGC	1 cut(s)	1137
BspOI	GCTAGC	1 cut(s)	1296
BspPI	GGATC	2 cut(s)	366, 379
BspTI	CTTAAG	2 cut(s)	1045, 1432
BsrBI	CCGCTC	1 cut(s)	210
BsrFI	RCCGGY	2 cut(s)	1380, 1409
BsrI	ACTGG	6 cut(s)	35, 228, 376, 589, 1100, 1225
BssAI	RCCGGY	2 cut(s)	1380, 1409
BssECI	CCNNGG	5 cut(s)	460, 609, 1255, 1322, 1334
BssMI	GATC	8 cut(s)	127, 145, 336, 371, 762, 769, 814, 1162
BssNAI	GTATAC	1 cut(s)	1155
BssT1I	CCWWGG	3 cut(s)	609, 1255, 1334
Bst1107I	GTATAC	1 cut(s)	1155
Bst2UI	CCWGG	2 cut(s)	462, 1364
Bst4CI	ACNGT	3 cut(s)	414, 535, 938
BstAFI	CTTAAG	2 cut(s)	1045, 1432
BstC8I	GCNNGC	3 cut(s)	870, 1294, 1326
BstDEI	CTNAG	6 cut(s)	42, 737, 822, 901, 1137, 1146
BstDSI	CCRYGG	2 cut(s)	1255, 1322
BstF5I	GGATG	8 cut(s)	205, 253, 362, 847, 1001, 1036, 1349, 1462
BstFNI	CGCG	1 cut(s)	1324
BstHHI	GCGC	2 cut(s)	359, 1134
BstKTI	GATC	8 cut(s)	130, 148, 339, 374, 765, 772, 817, 1165
BstMBI	GATC	8 cut(s)	127, 145, 336, 371, 762, 769, 814, 1162
BstMCI	CGRYCG	1 cut(s)	1410
BstMWI	GCNNNNNNNGC	3 cut(s)	614, 1321, 1490
BstNI	CCWGG	2 cut(s)	462, 1364
BstNSI	RCATGY	1 cut(s)	608
BstPAI	GACNNNNGTC	1 cut(s)	824
BstSCI	CCNGG	3 cut(s)	64, 460, 1362
BstSFI	CTRYAG	1 cut(s)	726
BstUI	CGCG	1 cut(s)	1324
BstV1I	GCAGC	5 cut(s)	146, 891, 1175, 1315, 1502
BstV2I	GAAGAC	1 cut(s)	633
BstX2I	RGATCY	1 cut(s)	371
BstXI	CCANNNNNNTGG	1 cut(s)	1262
BstYI	RGATCY	1 cut(s)	371
BstZ17I	GTATAC	1 cut(s)	1155
BstZI	CGGCCG	1 cut(s)	1407
BsuRI	GGCC	2 cut(s)	156, 1409
BtgI	CCRYGG	2 cut(s)	1255, 1322
BtgZI	GCGATG	1 cut(s)	720
BtrI	CACGTC	1 cut(s)	1081
BtsCI	GGATG	8 cut(s)	205, 253, 362, 847, 1001, 1036, 1349, 1462
BtsI	GCAGTG	1 cut(s)	630
BtsIMutI	CAGTG	3 cut(s)	630, 943, 1201
BveI	ACCTGC	1 cut(s)	1137
Cac8I	GCNNGC	3 cut(s)	870, 1294, 1326
CciI	TCATGA	2 cut(s)	670, 1120
CfoI	GCGC	2 cut(s)	359, 1134
Cfr10I	RCCGGY	2 cut(s)	1380, 1409
Cfr13I	GGNCC	1 cut(s)	464
Cfr42I	CCGCGG	1 cut(s)	1325
CseI	GACGC	1 cut(s)	629
Csp6I	GTAC	2 cut(s)	1039, 1241
CviQI	GTAC	2 cut(s)	1039, 1241
DdeI	CTNAG	6 cut(s)	42, 737, 822, 901, 1137, 1146
DpnI	GATC	8 cut(s)	129, 147, 338, 373, 764, 771, 816, 1164
DpnII	GATC	8 cut(s)	127, 145, 336, 371, 762, 769, 814, 1162
DraI	TTTAAA	1 cut(s)	975
DriI	GACNNNNNGTC	1 cut(s)	241
EaeI	YGGCCR	2 cut(s)	154, 1407
EagI	CGGCCG	1 cut(s)	1407
Eam1105I	GACNNNNNGTC	1 cut(s)	241
EciI	GGCGGA	1 cut(s)	578
Ecl136II	GAGCTC	1 cut(s)	62
EclXI	CGGCCG	1 cut(s)	1407
Eco130I	CCWWGG	3 cut(s)	609, 1255, 1334
Eco24I	GRGCYC	1 cut(s)	64
Eco32I	GATATC	2 cut(s)	99, 1420
Eco47I	GGWCC	1 cut(s)	464
Eco52I	CGGCCG	1 cut(s)	1407
Eco53kI	GAGCTC	1 cut(s)	62
Eco57I	CTGAAG	3 cut(s)	65, 645, 1177
EcoICRI	GAGCTC	1 cut(s)	62
EcoRI	GAATTC	2 cut(s)	260, 842
EcoRII	CCWGG	2 cut(s)	460, 1362
EcoRV	GATATC	2 cut(s)	99, 1420
EcoT14I	CCWWGG	3 cut(s)	609, 1255, 1334
EcoT22I	ATGCAT	1 cut(s)	1522
EcoT38I	GRGCYC	1 cut(s)	64
ErhI	CCWWGG	3 cut(s)	609, 1255, 1334
FaqI	GGGAC	2 cut(s)	571, 1091
FauI	CCCGC	1 cut(s)	1317
FauNDI	CATATG	1 cut(s)	1086
FbaI	TGATCA	1 cut(s)	127
FblI	GTMKAC	1 cut(s)	1154
Fnu4HI	GCNGC	6 cut(s)	157, 160, 880, 1189, 1329, 1491
FokI	GGATG	8 cut(s)	212, 240, 349, 834, 988, 1043, 1336, 1449
FriOI	GRGCYC	1 cut(s)	64
Fsp4HI	GCNGC	6 cut(s)	157, 160, 880, 1189, 1329, 1491
FspBI	CTAG	3 cut(s)	1238, 1293, 1485
FspI	TGCGCA	1 cut(s)	358
GlaI	GCGC	2 cut(s)	358, 1133
GluI	GCNGC	6 cut(s)	157, 160, 880, 1189, 1329, 1491
GsaI	CCCAGC	3 cut(s)	12, 253, 1497
GsuI	CTGGAG	1 cut(s)	245
HaeIII	GGCC	2 cut(s)	156, 1409
HapII	CCGG	5 cut(s)	66, 257, 296, 1381, 1410
HgaI	GACGC	1 cut(s)	629
HhaI	GCGC	2 cut(s)	359, 1134
Hin6I	GCGC	2 cut(s)	357, 1132
HinP1I	GCGC	2 cut(s)	357, 1132
HincII	GTYRAC	1 cut(s)	907
HindII	GTYRAC	1 cut(s)	907
HinfI	GANTC	8 cut(s)	4, 111, 286, 754, 962, 1063, 1091, 1117
HpaII	CCGG	5 cut(s)	66, 257, 296, 1381, 1410
HphI	GGTGA	7 cut(s)	80, 122, 137, 448, 722, 1089, 1280
Hpy166II	GTNNAC	4 cut(s)	246, 467, 907, 1155
Hpy188I	TCNGA	7 cut(s)	16, 285, 481, 499, 819, 1012, 1147
Hpy8I	GTNNAC	4 cut(s)	246, 467, 907, 1155
HpyAV	CCTTC	3 cut(s)	412, 422, 1268
HpyCH4III	ACNGT	3 cut(s)	414, 535, 938
HpyCH4IV	ACGT	3 cut(s)	237, 242, 1080
HpyCH4V	TGCA	9 cut(s)	728, 872, 941, 1001, 1084, 1106, 1217, 1490, 1520
HpyF10VI	GCNNNNNNNGC	3 cut(s)	614, 1321, 1490
HpyF3I	CTNAG	6 cut(s)	42, 737, 822, 901, 1137, 1146
HpySE526I	ACGT	3 cut(s)	237, 242, 1080
HspAI	GCGC	2 cut(s)	357, 1132
Kpn2I	TCCGGA	1 cut(s)	256
Ksp22I	TGATCA	1 cut(s)	127
KspI	CCGCGG	1 cut(s)	1325
Kzo9I	GATC	8 cut(s)	127, 145, 336, 371, 762, 769, 814, 1162
LmnI	GCTCC	5 cut(s)	17, 67, 226, 1336, 1442
Lsp1109I	GCAGC	5 cut(s)	146, 891, 1175, 1315, 1502
LweI	GCATC	4 cut(s)	262, 635, 1010, 1471
MaeI	CTAG	3 cut(s)	1238, 1293, 1485
MaeII	ACGT	3 cut(s)	237, 242, 1080
MaeIII	GTNAC	4 cut(s)	238, 287, 1052, 1412
MalI	GATC	8 cut(s)	129, 147, 338, 373, 764, 771, 816, 1164
MbiI	CCGCTC	1 cut(s)	210
MboI	GATC	8 cut(s)	127, 145, 336, 371, 762, 769, 814, 1162
MboII	GAAGA	9 cut(s)	71, 160, 346, 451, 533, 580, 638, 1086, 1283
MflI	RGATCY	1 cut(s)	371
MhlI	GDGCHC	3 cut(s)	64, 207, 1128
MluCI	AATT	8 cut(s)	260, 266, 324, 842, 993, 1178, 1396, 1479
MlyI	GAGTC	1 cut(s)	295
MmeI	TCCRAC	3 cut(s)	39, 213, 390
Mph1103I	ATGCAT	1 cut(s)	1522
MroI	TCCGGA	1 cut(s)	256
MroXI	GAANNNNTTC	2 cut(s)	78, 717
MseI	TTAA	5 cut(s)	423, 974, 1046, 1433, 1478
MslI	CAYNNNNRTG	2 cut(s)	669, 1389
MspA1I	CMGCKG	3 cut(s)	159, 1324, 1493
MspCI	CTTAAG	2 cut(s)	1045, 1432
MspI	CCGG	5 cut(s)	66, 257, 296, 1381, 1410
MspR9I	CCNGG	3 cut(s)	66, 462, 1364
MvaI	CCWGG	2 cut(s)	462, 1364
MvnI	CGCG	1 cut(s)	1324
MwoI	GCNNNNNNNGC	3 cut(s)	614, 1321, 1490
NciI	CCSGG	1 cut(s)	66
NcoI	CCATGG	1 cut(s)	1255
NdeI	CATATG	1 cut(s)	1086
NdeII	GATC	8 cut(s)	127, 145, 336, 371, 762, 769, 814, 1162
NheI	GCTAGC	1 cut(s)	1292
NlaIV	GGNNCC	1 cut(s)	373
NmeAIII	GCCGAG	1 cut(s)	1385
NmuCI	GTSAC	2 cut(s)	287, 1052
NsbI	TGCGCA	1 cut(s)	358
NsiI	ATGCAT	1 cut(s)	1522
NspI	RCATGY	1 cut(s)	608
PagI	TCATGA	2 cut(s)	670, 1120
PaqCI	CACCTGC	1 cut(s)	1137
PdmI	GAANNNNTTC	2 cut(s)	78, 717
PfeI	GAWTC	6 cut(s)	111, 754, 962, 1063, 1091, 1117
PkrI	GCNGC	6 cut(s)	158, 161, 881, 1190, 1330, 1492
PleI	GAGTC	1 cut(s)	294
PpsI	GAGTC	1 cut(s)	294
PshAI	GACNNNNGTC	1 cut(s)	824
PsiI	TTATAA	1 cut(s)	678
Psp124BI	GAGCTC	1 cut(s)	64
Psp6I	CCWGG	2 cut(s)	460, 1362
PspFI	CCCAGC	3 cut(s)	8, 249, 1493
PspGI	CCWGG	2 cut(s)	460, 1362
PspN4I	GGNNCC	1 cut(s)	373
PspPI	GGNCC	1 cut(s)	464
PstI	CTGCAG	1 cut(s)	730
PsuI	RGATCY	1 cut(s)	371
PvuII	CAGCTG	1 cut(s)	1493
RsaI	GTAC	2 cut(s)	1040, 1242
RsaNI	GTAC	2 cut(s)	1039, 1241
RseI	CAYNNNNRTG	2 cut(s)	669, 1389
SacI	GAGCTC	1 cut(s)	64
SacII	CCGCGG	1 cut(s)	1325
SaqAI	TTAA	5 cut(s)	423, 974, 1046, 1433, 1478
SatI	GCNGC	6 cut(s)	157, 160, 880, 1189, 1329, 1491
Sau3AI	GATC	8 cut(s)	127, 145, 336, 371, 762, 769, 814, 1162
Sau96I	GGNCC	1 cut(s)	464
SchI	GAGTC	1 cut(s)	295
ScrFI	CCNGG	3 cut(s)	66, 462, 1364
SduI	GDGCHC	3 cut(s)	64, 207, 1128
SfaNI	GCATC	4 cut(s)	262, 635, 1010, 1471
SfcI	CTRYAG	1 cut(s)	726
Sfr303I	CCGCGG	1 cut(s)	1325
SgrBI	CCGCGG	1 cut(s)	1325
SinI	GGWCC	1 cut(s)	464
SmiMI	CAYNNNNRTG	2 cut(s)	669, 1389
SmlI	CTYRAG	5 cut(s)	758, 883, 1045, 1354, 1432
SmoI	CTYRAG	5 cut(s)	758, 883, 1045, 1354, 1432
Sse9I	AATT	8 cut(s)	260, 266, 324, 842, 993, 1178, 1396, 1479
SsiI	CCGC	6 cut(s)	157, 208, 563, 1036, 1322, 1324
SspI	AATATT	3 cut(s)	682, 784, 948
SspMI	CTAG	3 cut(s)	1238, 1293, 1485
SstI	GAGCTC	1 cut(s)	64
StyD4I	CCNGG	3 cut(s)	64, 460, 1362
StyI	CCWWGG	3 cut(s)	609, 1255, 1334
TaaI	ACNGT	3 cut(s)	414, 535, 938
TaiI	ACGT	3 cut(s)	240, 245, 1083
TaqI	TCGA	6 cut(s)	27, 114, 148, 171, 214, 321
TaqII	GACCGA	1 cut(s)	290
TasI	AATT	8 cut(s)	260, 266, 324, 842, 993, 1178, 1396, 1479
TauI	GCSGC	1 cut(s)	159
TfiI	GAWTC	6 cut(s)	111, 754, 962, 1063, 1091, 1117
Tru1I	TTAA	5 cut(s)	423, 974, 1046, 1433, 1478
Tru9I	TTAA	5 cut(s)	423, 974, 1046, 1433, 1478
TscAI	CASTG	3 cut(s)	637, 943, 1201
TseFI	GTSAC	2 cut(s)	287, 1052
TseI	GCWGC	5 cut(s)	159, 879, 1188, 1328, 1490
Tsp45I	GTSAC	2 cut(s)	287, 1052
TspGWI	ACGGA	1 cut(s)	384
TspRI	CASTG	3 cut(s)	637, 943, 1201
Vha464I	CTTAAG	2 cut(s)	1045, 1432
VpaK11BI	GGWCC	1 cut(s)	464
XapI	RAATTY	4 cut(s)	260, 842, 1178, 1396
XceI	RCATGY	1 cut(s)	608
XmiI	GTMKAC	1 cut(s)	1154
XmnI	GAANNNNTTC	2 cut(s)	78, 717
XspI	CTAG	3 cut(s)	1238, 1293, 1485
Zsp2I	ATGCAT	1 cut(s)	1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.