Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0014737

Physical Location & Seq

Genomic Coordinates Reverse (-)

56275306 .. 56280036

Gene Structure 4731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00262220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGCGTGCAAGCAATGACGTTTATATGCCTTACACTCGCGCAAATGTTTGCCTAGCTTGGGTTCGCGAGCTTGTGACCCAAGAGGGGAAGGAGATGCAGAAGCTTCTGCAAGTGCCGGCGTATGACGCTGCGCAAGTAGCCAGGTGCCTGGACAAGAGGCACCAGCGACGGAGAAAGCCAACAGAAACCTCCAAGGCTTTGTCACCTAGCTCAGCCATGACTCCCAGCTCCGACCACCCTCTCGACTGGAAGTTCTCTCAGGTTTTCGGCGAACGAGCTCCCGGTGATGAACTTCAGGAAGTTGATGTGATATCTGCTATTGGATTCGACAACCGTGGTGATCACCTTGCCATTGGAGATCGAGGTGGCCGCTGCGTAATCTTCGAGAGGAAGGATGGGAAACACAATTTGGATGAGCACCGTTCTCGACTTGAACTGGAGCAGTTGGACGTTACGTCCACCCAGCATCCGGAATTCCAATTCAAGACCGAGTTTCAGAGTCATGAACCGGAGTTTGACTACTTGAAGAGTGTCGAAATTGAGGAGAAGATCAACAAAGTAAAGTGGTGCGCAACATCCAACGGATCCCAGTTTATTCTTTCAACAAATGACAAGACAATAAAACTGTGGAAGGTTAAGGAAGGTAAGGTGAAGAAAGTAAAAGAAATGAACCCTGGTCCACTTACGAGTTCAGATAATGTGCTTTTGTCTGAAAAGAGTTTCATCAGTAGAGAAGATAAACCTACTGTTGCTAATGGCTATCGTCAAGAATGGGCGGGGAAGATGGCTAATAACGTGTCCCAGTATCAAGACATACATGCCAAGGTTGACACCCGTGTTGCTGACACTGAAGACACTGCCCAAACAAGATGCCGAAAGGTGTATGCTCATGCTCATGATTATAATATTCACTCCATCTCAAATAATAGCGATGGTGAAACTTTTCTTTCTGCAGATGACCTTAGAATAAACTTGTGGAATCTTGAGATCAGCGATCAATGTTTTAATATTATAGACATGAAGCCACCGAACATGGACGATCTGACTGAGGTCATAACATCGGCAGAATTCCATCCCATTCATTGTAATCTGCTTGCATACAGCAGCTCAAGAGGTTTTATTCGCTTAGTTGACATGAGGCAGTCAGCTTTATGCGATAACAGTGCAAGAATATTACAGGACGGAGATTCAAATGCTTTAAAGTCATTTTTCACAGAAATTATTGCATCCATCTCTGACATCAAGTTTTCAAAGGATGGGCGGTACATCTTAAGTCGTGACTACATGAATCTTAAGCTCTGGGACGTGCATATGGATTCTTCACCAGTTGCAATATACAGGATTCATGAGCACCTGCGCCCTAAGTTATCTGAGTTGTATACTAATGATCGCATATTTGATAAATTTGGGTGCTGCTTCAGTGGAGATGGACTTCATTATGCAACTGGGTCTTATAGCAACCTAGTACGCATTTTTCCCCATGGTATTGGAGGTGAAGAAGGAACTACAATAGAAGCTAGCAAAACTCCTAACAGGAAGCCACTTCCGCAGGCTGCTCCAAGGGTTAGGAGGTCATCCTTGAGCAACCTGGCAAGAGGATTTTACCGGCATGGGCATGAAAATTCAAGCTCGGCCGGTAACGATATCAGCTATGACTTAAGCTCCAAGCTATTACAGGTGGCATGGCATCCAGAAGCAAACTTAATTGCTAGTGCAGCTGGGAATAGCTTGTTCATGTACTATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0000278 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0010921 GO:0016311 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0030234 GO:0031323 GO:0031399 GO:0032268 GO:0032502 GO:0032991 GO:0035303 GO:0035304 GO:0036211 GO:0043170 GO:0043412 GO:0043666 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0060255 GO:0065007 GO:0065009 GO:0070262 GO:0071704 GO:0080090 GO:0098772 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04151 ko04152 ko04261 ko04390 ko04391 ko04530 ko04728 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04151 map04152 map04261 map04390 map04391 map04530 map04728 map05142 map05160 map05165

Pfam Domains

Protein Families

WD40

Protein Analysis

582

Amino Acids

65.96

Weight (kDa)

6.41

Isoelectric Point (pI)

42.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014737)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g05510
malus_domestica	MD14G1177400.v1.1
prunus_persica	Prupe.5G171300_v2.0.a1 Prupe.5G171300_v2.0.a1
pyrus_communis	pycom14g14830
rosa_chinensis	RchiOBHm_Chr7g0193311
rosa_laevigata	RLG00000004280 RLG00000014378
rosa_multiflora	Rmu_ssc0000092.1_g000013
rosa_roxburghii	Rroxscaffold_3G00262220 Rroxscaffold_4G00314280
rosa_rugosa	Rorug07G0008800
rosa_samantha	Rh7AG134400 Rh7BG135400 Rh7CG138500 Rh7DG136500
rosa_wichuraiana	Rw7G011500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	903
AarI	CACCTGC	1 cut(s)	1362
Acc16I	TGCGCA	2 cut(s)	132, 571
Acc36I	ACCTGC	1 cut(s)	1362
AccB1I	GGYRCC	2 cut(s)	144, 159
AccI	GTMKAC	1 cut(s)	1379
AccII	CGCG	2 cut(s)	39, 66
AccIII	TCCGGA	1 cut(s)	469
AciI	CCGC	4 cut(s)	370, 776, 1261, 1547
AclWI	GGATC	2 cut(s)	579, 592
AcoI	YGGCCR	2 cut(s)	367, 1632
AcsI	RAATTY	4 cut(s)	473, 1067, 1403, 1621
AcuI	CTGAAG	3 cut(s)	278, 870, 1402
AfaI	GTAC	3 cut(s)	1265, 1467, 1739
AfiI	CCNNNNNNNGG	3 cut(s)	58, 84, 469
AflII	CTTAAG	3 cut(s)	1270, 1292, 1657
AflIII	ACRYGT	1 cut(s)	795
AgsI	TTSAA	7 cut(s)	434, 484, 526, 603, 1191, 1251, 1626
AhdI	GACNNNNNGTC	1 cut(s)	454
AjiI	CACGTC	1 cut(s)	1306
AjnI	CCWGG	4 cut(s)	140, 147, 673, 1587
AjuI	GAANNNNNNNTTGG	2 cut(s)	392, 424
Alw21I	GWGCWC	3 cut(s)	280, 420, 1353
AlwI	GGATC	2 cut(s)	579, 592
Aor13HI	TCCGGA	1 cut(s)	469
AoxI	GGCC	2 cut(s)	367, 1632
ApeKI	GCWGC	6 cut(s)	128, 372, 1104, 1413, 1553, 1715
ApoI	RAATTY	4 cut(s)	473, 1067, 1403, 1621
Asp700I	GAANNNNTTC	1 cut(s)	942
AspLEI	GCGC	4 cut(s)	41, 133, 572, 1359
AspS9I	GGNCC	1 cut(s)	677
AsuC2I	CCSGG	1 cut(s)	282
AsuHPI	GGTGA	8 cut(s)	195, 296, 335, 350, 661, 947, 1314, 1505
AsuNHI	GCTAGC	1 cut(s)	1517
AvaII	GGWCC	1 cut(s)	677
BamHI	GGATCC	1 cut(s)	584
BanI	GGYRCC	2 cut(s)	144, 159
BanII	GRGCYC	1 cut(s)	280
BbsI	GAAGAC	1 cut(s)	858
Bbv12I	GWGCWC	3 cut(s)	280, 420, 1353
BbvI	GCAGC	6 cut(s)	115, 359, 1116, 1400, 1540, 1727
BccI	CCATC	8 cut(s)	389, 778, 923, 926, 1080, 1238, 1250, 1421
BcgI	CGANNNNNNTGC	4 cut(s)	407, 441, 1145, 1179
BciT130I	CCWGG	4 cut(s)	142, 149, 675, 1589
BclI	TGATCA	1 cut(s)	340
BcnI	CCSGG	1 cut(s)	282
BfaI	CTAG	5 cut(s)	53, 207, 1463, 1518, 1710
BfmI	CTRYAG	1 cut(s)	951
BfrI	CTTAAG	3 cut(s)	1270, 1292, 1657
BfuAI	ACCTGC	1 cut(s)	1362
BisI	GCNGC	7 cut(s)	129, 370, 373, 1105, 1414, 1554, 1716
BlpI	GCTNAGC	1 cut(s)	211
BlsI	GCNGC	7 cut(s)	130, 371, 374, 1106, 1415, 1555, 1717
Bme1390I	CCNGG	5 cut(s)	142, 149, 282, 675, 1589
Bme18I	GGWCC	1 cut(s)	677
BmeRI	GACNNNNNGTC	1 cut(s)	454
BmgBI	CACGTC	1 cut(s)	1306
BmgT120I	GGNCC	1 cut(s)	677
BmiI	GGNNCC	3 cut(s)	146, 161, 586
BmrFI	CCNGG	5 cut(s)	142, 149, 282, 675, 1589
BmrI	ACTGGG	3 cut(s)	583, 796, 1455
BmsI	GCATC	5 cut(s)	84, 475, 860, 1235, 1696
BmtI	GCTAGC	1 cut(s)	1521
BmuI	ACTGGG	3 cut(s)	583, 796, 1455
BoxI	GACNNNNGTC	1 cut(s)	1049
BpiI	GAAGAC	1 cut(s)	858
BpmI	CTGGAG	1 cut(s)	458
Bpu1102I	GCTNAGC	1 cut(s)	211
BpuEI	CTTGAG	3 cut(s)	1004, 1093, 1600
BpuMI	CCSGG	1 cut(s)	282
BsaJI	CCNNGG	6 cut(s)	192, 334, 673, 822, 1480, 1559
BsaWI	WCCGGW	2 cut(s)	469, 508
BsaXI	ACNNNNNCTCC	2 cut(s)	1646, 1676
Bsc4I	CCNNNNNNNGG	3 cut(s)	58, 84, 469
Bse118I	RCCGGY	3 cut(s)	115, 1605, 1634
Bse1I	ACTGG	6 cut(s)	251, 441, 589, 802, 1325, 1450
Bse3DI	GCAATG	1 cut(s)	19
BseAI	TCCGGA	1 cut(s)	469
BseBI	CCWGG	4 cut(s)	142, 149, 675, 1589
BseDI	CCNNGG	6 cut(s)	192, 334, 673, 822, 1480, 1559
BseGI	GGATG	9 cut(s)	400, 418, 466, 575, 1072, 1226, 1261, 1574, 1687
BseLI	CCNNNNNNNGG	3 cut(s)	58, 84, 469
BseMI	GCAATG	1 cut(s)	19
BseMII	CTCAG	4 cut(s)	225, 272, 1038, 1362
BseNI	ACTGG	6 cut(s)	251, 441, 589, 802, 1325, 1450
BseRI	GAGGAG	1 cut(s)	557
BseX3I	CGGCCG	1 cut(s)	1632
BseXI	GCAGC	6 cut(s)	115, 359, 1116, 1400, 1540, 1727
BseYI	CCCAGC	3 cut(s)	224, 462, 1718
BsgI	GTGCAG	1 cut(s)	1734
Bsh1236I	CGCG	2 cut(s)	39, 66
Bsh1285I	CGRYCG	1 cut(s)	1635
BshFI	GGCC	2 cut(s)	369, 1634
BshNI	GGYRCC	2 cut(s)	144, 159
BsiEI	CGRYCG	1 cut(s)	1635
BsiHKAI	GWGCWC	3 cut(s)	280, 420, 1353
BsiSI	CCGG	6 cut(s)	116, 282, 470, 509, 1606, 1635
BslFI	GGGAC	2 cut(s)	784, 1316
BslI	CCNNNNNNNGG	3 cut(s)	58, 84, 469
BsmFI	GGGAC	2 cut(s)	784, 1316
BsnI	GGCC	2 cut(s)	369, 1634
Bsp1286I	GDGCHC	3 cut(s)	280, 420, 1353
Bsp13I	TCCGGA	1 cut(s)	469
Bsp143I	GATC	8 cut(s)	340, 358, 549, 584, 987, 994, 1039, 1387
Bsp1720I	GCTNAGC	1 cut(s)	211
Bsp19I	CCATGG	1 cut(s)	1480
Bsp68I	TCGCGA	1 cut(s)	66
BspACI	CCGC	4 cut(s)	370, 776, 1261, 1547
BspANI	GGCC	2 cut(s)	369, 1634
BspCNI	CTCAG	4 cut(s)	224, 271, 1039, 1363
BspEI	TCCGGA	1 cut(s)	469
BspFNI	CGCG	2 cut(s)	39, 66
BspHI	TCATGA	3 cut(s)	502, 895, 1345
BspLI	GGNNCC	3 cut(s)	146, 161, 586
BspMAI	CTGCAG	1 cut(s)	955
BspMI	ACCTGC	1 cut(s)	1362
BspOI	GCTAGC	1 cut(s)	1521
BspPI	GGATC	2 cut(s)	579, 592
BspT107I	GGYRCC	2 cut(s)	144, 159
BspTI	CTTAAG	3 cut(s)	1270, 1292, 1657
BsrDI	GCAATG	1 cut(s)	19
BsrFI	RCCGGY	3 cut(s)	115, 1605, 1634
BsrI	ACTGG	6 cut(s)	251, 441, 589, 802, 1325, 1450
BssAI	RCCGGY	3 cut(s)	115, 1605, 1634
BssECI	CCNNGG	6 cut(s)	192, 334, 673, 822, 1480, 1559
BssMI	GATC	8 cut(s)	340, 358, 549, 584, 987, 994, 1039, 1387
BssNAI	GTATAC	1 cut(s)	1380
BssT1I	CCWWGG	4 cut(s)	192, 822, 1480, 1559
Bst1107I	GTATAC	1 cut(s)	1380
Bst2UI	CCWGG	4 cut(s)	142, 149, 675, 1589
Bst4CI	ACNGT	5 cut(s)	335, 422, 627, 748, 1163
Bst6I	CTCTTC	1 cut(s)	521
BstAFI	CTTAAG	3 cut(s)	1270, 1292, 1657
BstC8I	GCNNGC	7 cut(s)	6, 10, 68, 117, 1095, 1519, 1551
BstDEI	CTNAG	7 cut(s)	211, 258, 962, 1047, 1126, 1362, 1371
BstDSI	CCRYGG	2 cut(s)	334, 1480
BstF5I	GGATG	9 cut(s)	400, 418, 466, 575, 1072, 1226, 1261, 1574, 1687
BstFNI	CGCG	2 cut(s)	39, 66
BstHHI	GCGC	4 cut(s)	41, 133, 572, 1359
BstKTI	GATC	8 cut(s)	343, 361, 552, 587, 990, 997, 1042, 1390
BstMBI	GATC	8 cut(s)	340, 358, 549, 584, 987, 994, 1039, 1387
BstMCI	CGRYCG	1 cut(s)	1635
BstMWI	GCNNNNNNNGC	4 cut(s)	125, 137, 1546, 1715
BstNI	CCWGG	4 cut(s)	142, 149, 675, 1589
BstNSI	RCATGY	1 cut(s)	821
BstPAI	GACNNNNGTC	1 cut(s)	1049
BstSCI	CCNGG	5 cut(s)	140, 147, 280, 673, 1587
BstSFI	CTRYAG	1 cut(s)	951
BstUI	CGCG	2 cut(s)	39, 66
BstV1I	GCAGC	6 cut(s)	115, 359, 1116, 1400, 1540, 1727
BstV2I	GAAGAC	1 cut(s)	858
BstX2I	RGATCY	1 cut(s)	584
BstXI	CCANNNNNNTGG	2 cut(s)	148, 1487
BstYI	RGATCY	1 cut(s)	584
BstZ17I	GTATAC	1 cut(s)	1380
BstZI	CGGCCG	1 cut(s)	1632
BsuRI	GGCC	2 cut(s)	369, 1634
BtgI	CCRYGG	2 cut(s)	334, 1480
BtgZI	GCGATG	1 cut(s)	945
BtrI	CACGTC	1 cut(s)	1306
BtsCI	GGATG	9 cut(s)	400, 418, 466, 575, 1072, 1226, 1261, 1574, 1687
BtsI	GCAGTG	1 cut(s)	855
BtsIMutI	CAGTG	4 cut(s)	846, 855, 1168, 1426
BtuMI	TCGCGA	1 cut(s)	66
BveI	ACCTGC	1 cut(s)	1362
Cac8I	GCNNGC	7 cut(s)	6, 10, 68, 117, 1095, 1519, 1551
CciI	TCATGA	3 cut(s)	502, 895, 1345
CfoI	GCGC	4 cut(s)	41, 133, 572, 1359
Cfr10I	RCCGGY	3 cut(s)	115, 1605, 1634
Cfr13I	GGNCC	1 cut(s)	677
CseI	GACGC	1 cut(s)	134
Csp6I	GTAC	3 cut(s)	1264, 1466, 1738
CviQI	GTAC	3 cut(s)	1264, 1466, 1738
DdeI	CTNAG	7 cut(s)	211, 258, 962, 1047, 1126, 1362, 1371
DpnI	GATC	8 cut(s)	342, 360, 551, 586, 989, 996, 1041, 1389
DpnII	GATC	8 cut(s)	340, 358, 549, 584, 987, 994, 1039, 1387
DraI	TTTAAA	1 cut(s)	1200
DriI	GACNNNNNGTC	1 cut(s)	454
EaeI	YGGCCR	2 cut(s)	367, 1632
EagI	CGGCCG	1 cut(s)	1632
Eam1104I	CTCTTC	1 cut(s)	521
Eam1105I	GACNNNNNGTC	1 cut(s)	454
EarI	CTCTTC	1 cut(s)	521
Ecl136II	GAGCTC	1 cut(s)	278
EclXI	CGGCCG	1 cut(s)	1632
Eco130I	CCWWGG	4 cut(s)	192, 822, 1480, 1559
Eco24I	GRGCYC	1 cut(s)	280
Eco32I	GATATC	2 cut(s)	312, 1645
Eco47I	GGWCC	1 cut(s)	677
Eco52I	CGGCCG	1 cut(s)	1632
Eco53kI	GAGCTC	1 cut(s)	278
Eco57I	CTGAAG	3 cut(s)	278, 870, 1402
EcoICRI	GAGCTC	1 cut(s)	278
EcoRI	GAATTC	2 cut(s)	473, 1067
EcoRII	CCWGG	4 cut(s)	140, 147, 673, 1587
EcoRV	GATATC	2 cut(s)	312, 1645
EcoT14I	CCWWGG	4 cut(s)	192, 822, 1480, 1559
EcoT22I	ATGCAT	1 cut(s)	1747
EcoT38I	GRGCYC	1 cut(s)	280
ErhI	CCWWGG	4 cut(s)	192, 822, 1480, 1559
FaqI	GGGAC	2 cut(s)	784, 1316
FauI	CCCGC	1 cut(s)	769
FauNDI	CATATG	1 cut(s)	1311
FbaI	TGATCA	1 cut(s)	340
FblI	GTMKAC	1 cut(s)	1379
Fnu4HI	GCNGC	7 cut(s)	129, 370, 373, 1105, 1414, 1554, 1716
FokI	GGATG	9 cut(s)	407, 425, 453, 562, 1059, 1213, 1268, 1561, 1674
FriOI	GRGCYC	1 cut(s)	280
Fsp4HI	GCNGC	7 cut(s)	129, 370, 373, 1105, 1414, 1554, 1716
FspBI	CTAG	5 cut(s)	53, 207, 1463, 1518, 1710
FspI	TGCGCA	2 cut(s)	132, 571
GlaI	GCGC	4 cut(s)	40, 132, 571, 1358
GluI	GCNGC	7 cut(s)	129, 370, 373, 1105, 1414, 1554, 1716
GsaI	CCCAGC	3 cut(s)	228, 466, 1722
GsuI	CTGGAG	1 cut(s)	458
HaeIII	GGCC	2 cut(s)	369, 1634
HapII	CCGG	6 cut(s)	116, 282, 470, 509, 1606, 1635
HgaI	GACGC	1 cut(s)	134
HhaI	GCGC	4 cut(s)	41, 133, 572, 1359
Hin6I	GCGC	4 cut(s)	39, 131, 570, 1357
HinP1I	GCGC	4 cut(s)	39, 131, 570, 1357
HincII	GTYRAC	2 cut(s)	829, 1132
HindII	GTYRAC	2 cut(s)	829, 1132
HindIII	AAGCTT	1 cut(s)	101
HinfI	GANTC	8 cut(s)	220, 324, 499, 979, 1187, 1288, 1316, 1342
HpaII	CCGG	6 cut(s)	116, 282, 470, 509, 1606, 1635
HphI	GGTGA	8 cut(s)	195, 296, 335, 350, 661, 947, 1314, 1505
Hpy166II	GTNNAC	5 cut(s)	459, 680, 829, 1132, 1380
Hpy188I	TCNGA	7 cut(s)	232, 498, 694, 712, 1044, 1237, 1372
Hpy8I	GTNNAC	5 cut(s)	459, 680, 829, 1132, 1380
Hpy99I	CGWCG	1 cut(s)	171
HpyAV	CCTTC	5 cut(s)	82, 385, 625, 635, 1493
HpyCH4III	ACNGT	5 cut(s)	335, 422, 627, 748, 1163
HpyCH4IV	ACGT	5 cut(s)	18, 450, 455, 795, 1305
HpyF10VI	GCNNNNNNNGC	4 cut(s)	125, 137, 1546, 1715
HpyF3I	CTNAG	7 cut(s)	211, 258, 962, 1047, 1126, 1362, 1371
HpySE526I	ACGT	5 cut(s)	18, 450, 455, 795, 1305
HspAI	GCGC	4 cut(s)	39, 131, 570, 1357
Kpn2I	TCCGGA	1 cut(s)	469
KroI	GCCGGC	1 cut(s)	115
KroNI	GCCGGC	1 cut(s)	117
Ksp22I	TGATCA	1 cut(s)	340
Kzo9I	GATC	8 cut(s)	340, 358, 549, 584, 987, 994, 1039, 1387
LmnI	GCTCC	5 cut(s)	233, 283, 439, 1561, 1667
Lsp1109I	GCAGC	6 cut(s)	115, 359, 1116, 1400, 1540, 1727
LweI	GCATC	5 cut(s)	84, 475, 860, 1235, 1696
MaeI	CTAG	5 cut(s)	53, 207, 1463, 1518, 1710
MaeII	ACGT	5 cut(s)	18, 450, 455, 795, 1305
MaeIII	GTNAC	5 cut(s)	73, 201, 451, 1277, 1637
MalI	GATC	8 cut(s)	342, 360, 551, 586, 989, 996, 1041, 1389
MboI	GATC	8 cut(s)	340, 358, 549, 584, 987, 994, 1039, 1387
MboII	GAAGA	9 cut(s)	373, 538, 559, 664, 746, 793, 863, 1311, 1508
MflI	RGATCY	1 cut(s)	584
MhlI	GDGCHC	3 cut(s)	280, 420, 1353
MluCI	AATT	9 cut(s)	406, 473, 479, 537, 1067, 1218, 1403, 1621, 1704
MlyI	GAGTC	2 cut(s)	214, 508
MmeI	TCCRAC	3 cut(s)	255, 426, 603
Mph1103I	ATGCAT	1 cut(s)	1747
MroI	TCCGGA	1 cut(s)	469
MroNI	GCCGGC	1 cut(s)	115
MroXI	GAANNNNTTC	1 cut(s)	942
MseI	TTAA	7 cut(s)	636, 1005, 1199, 1271, 1293, 1658, 1703
MslI	CAYNNNNRTG	2 cut(s)	894, 1614
MspA1I	CMGCKG	2 cut(s)	372, 1718
MspCI	CTTAAG	3 cut(s)	1270, 1292, 1657
MspI	CCGG	6 cut(s)	116, 282, 470, 509, 1606, 1635
MspR9I	CCNGG	5 cut(s)	142, 149, 282, 675, 1589
MvaI	CCWGG	4 cut(s)	142, 149, 675, 1589
MvnI	CGCG	2 cut(s)	39, 66
MwoI	GCNNNNNNNGC	4 cut(s)	125, 137, 1546, 1715
NaeI	GCCGGC	1 cut(s)	117
NciI	CCSGG	1 cut(s)	282
NcoI	CCATGG	1 cut(s)	1480
NdeI	CATATG	1 cut(s)	1311
NdeII	GATC	8 cut(s)	340, 358, 549, 584, 987, 994, 1039, 1387
NgoMIV	GCCGGC	1 cut(s)	115
NheI	GCTAGC	1 cut(s)	1517
NlaIV	GGNNCC	3 cut(s)	146, 161, 586
NmeAIII	GCCGAG	1 cut(s)	1610
NmuCI	GTSAC	3 cut(s)	73, 201, 1277
NruI	TCGCGA	1 cut(s)	66
NsbI	TGCGCA	2 cut(s)	132, 571
NsiI	ATGCAT	1 cut(s)	1747
NspI	RCATGY	1 cut(s)	821
PagI	TCATGA	3 cut(s)	502, 895, 1345
PaqCI	CACCTGC	1 cut(s)	1362
PdiI	GCCGGC	1 cut(s)	117
PdmI	GAANNNNTTC	1 cut(s)	942
PfeI	GAWTC	6 cut(s)	324, 979, 1187, 1288, 1316, 1342
PkrI	GCNGC	7 cut(s)	130, 371, 374, 1106, 1415, 1555, 1717
PleI	GAGTC	2 cut(s)	214, 507
PpsI	GAGTC	2 cut(s)	214, 507
PshAI	GACNNNNGTC	1 cut(s)	1049
PsiI	TTATAA	1 cut(s)	903
Psp124BI	GAGCTC	1 cut(s)	280
Psp6I	CCWGG	4 cut(s)	140, 147, 673, 1587
PspFI	CCCAGC	3 cut(s)	224, 462, 1718
PspGI	CCWGG	4 cut(s)	140, 147, 673, 1587
PspN4I	GGNNCC	3 cut(s)	146, 161, 586
PspPI	GGNCC	1 cut(s)	677
PstI	CTGCAG	1 cut(s)	955
PsuI	RGATCY	1 cut(s)	584
PvuII	CAGCTG	1 cut(s)	1718
RruI	TCGCGA	1 cut(s)	66
RsaI	GTAC	3 cut(s)	1265, 1467, 1739
RsaNI	GTAC	3 cut(s)	1264, 1466, 1738
RseI	CAYNNNNRTG	2 cut(s)	894, 1614
SacI	GAGCTC	1 cut(s)	280
SaqAI	TTAA	7 cut(s)	636, 1005, 1199, 1271, 1293, 1658, 1703
SatI	GCNGC	7 cut(s)	129, 370, 373, 1105, 1414, 1554, 1716
Sau3AI	GATC	8 cut(s)	340, 358, 549, 584, 987, 994, 1039, 1387
Sau96I	GGNCC	1 cut(s)	677
SchI	GAGTC	2 cut(s)	214, 508
ScrFI	CCNGG	5 cut(s)	142, 149, 282, 675, 1589
SduI	GDGCHC	3 cut(s)	280, 420, 1353
SfaNI	GCATC	5 cut(s)	84, 475, 860, 1235, 1696
SfcI	CTRYAG	1 cut(s)	951
SinI	GGWCC	1 cut(s)	677
SmiMI	CAYNNNNRTG	2 cut(s)	894, 1614
SmlI	CTYRAG	6 cut(s)	983, 1108, 1270, 1292, 1579, 1657
SmoI	CTYRAG	6 cut(s)	983, 1108, 1270, 1292, 1579, 1657
Sse9I	AATT	9 cut(s)	406, 473, 479, 537, 1067, 1218, 1403, 1621, 1704
SsiI	CCGC	4 cut(s)	370, 776, 1261, 1547
SspI	AATATT	3 cut(s)	907, 1009, 1173
SspMI	CTAG	5 cut(s)	53, 207, 1463, 1518, 1710
SstI	GAGCTC	1 cut(s)	280
StyD4I	CCNGG	5 cut(s)	140, 147, 280, 673, 1587
StyI	CCWWGG	4 cut(s)	192, 822, 1480, 1559
TaaI	ACNGT	5 cut(s)	335, 422, 627, 748, 1163
TaiI	ACGT	5 cut(s)	21, 453, 458, 798, 1308
TaqI	TCGA	6 cut(s)	243, 327, 361, 384, 427, 534
TaqII	GACCGA	1 cut(s)	503
TasI	AATT	9 cut(s)	406, 473, 479, 537, 1067, 1218, 1403, 1621, 1704
TatI	WGTACW	1 cut(s)	1737
TauI	GCSGC	1 cut(s)	372
TfiI	GAWTC	6 cut(s)	324, 979, 1187, 1288, 1316, 1342
Tru1I	TTAA	7 cut(s)	636, 1005, 1199, 1271, 1293, 1658, 1703
Tru9I	TTAA	7 cut(s)	636, 1005, 1199, 1271, 1293, 1658, 1703
TscAI	CASTG	4 cut(s)	853, 862, 1168, 1426
TseFI	GTSAC	3 cut(s)	73, 201, 1277
TseI	GCWGC	6 cut(s)	128, 372, 1104, 1413, 1553, 1715
Tsp45I	GTSAC	3 cut(s)	73, 201, 1277
TspGWI	ACGGA	3 cut(s)	184, 597, 1197
TspRI	CASTG	4 cut(s)	853, 862, 1168, 1426
Vha464I	CTTAAG	3 cut(s)	1270, 1292, 1657
VpaK11BI	GGWCC	1 cut(s)	677
XapI	RAATTY	4 cut(s)	473, 1067, 1403, 1621
XceI	RCATGY	1 cut(s)	821
XmiI	GTMKAC	1 cut(s)	1379
XmnI	GAANNNNTTC	1 cut(s)	942
XspI	CTAG	5 cut(s)	53, 207, 1463, 1518, 1710
Zsp2I	ATGCAT	1 cut(s)	1747

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.