Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0009313

Physical Location & Seq

Genomic Coordinates Reverse (-)

30649679 .. 30653579

Gene Structure 3901 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1225700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGCAGCCAAATTGGGTTCCTTCAAGTACAATTTCCAGGAGAAGAGAGAGCGCTTGCTCTCCGTCCAGAAGGGCTACTCCGAGCTCGGTTTCGTCCACATCGAGGAGCAAGAGCCGTCGGGGTCTGCCCGCTGCTGCACTTTCCGATCAGTCTCCGACCGAATCGTCGGCTGGTGCCGAACCGTGCAACATGTCTCGAGCCGGGCGGTTCAGATGGGTCAATCCGATCCGAGAAAGATCGTCTTCGCGGGGAAGATGGGTCTGGCGCTGATGATCGTCTCGCTGCTCATCTTCCTCAAAGAGCCGTTCAAGCAGCTCAGCCGCTACTCCGTCTGGGCAATTCTTACCGTTGTGGTGGTGTTCGAGTTCAGCATAGGAGCGACTCTGAGCAAAGGATTTAACCGCGGGTTGGGGACGTTATCGGCTGGAGGCCTGGCTTTGGCTGTGGCAAACTTATGTGGGCTGGCTGGAGAGTGGGAAGAAGCTGTTATTTTCGCTAGCATCTTTATCGTAGGATTTCTTGCAACTTACGCGAAGCTATACCCGACAATGAAGCCTTATGAATATGGGTTTCGGGTGTTCTTGTTGACATTTTGTTTCATCATGGTGTCTGGGTATCGGACAAGGGAATTTCTTCATACGGCTGTATCTCGATTCTTGCTTATTGCACTGGGTGCTGGTGTTGGTTTGGGAGTAAATATATGCATTTTCCCCATCTGGGCTGGTGAGGATCTGCACAACTTGGTGGTAAAAAATTTCCTGGGTGTTGCAAAATCATTGGAAGGTGTGGTTAACAATTACCTTAATTGCGTTGAATATGAGAGGGTCCCTTCCAAGATTCTTACATATCAAGCTTCTGATGATCCACTCTATAGTGGCTACAGATCTGCTGTGGAATCTACAAGCCAAGAGGACGCTCTGATGGGATTCGCTATCTGGGAGCCACCGCATGGTCGATACAGAATGCTTAGATATCCATGGAAGAACTATGTAAAAGTGGGTGGTGCACTGAGGCATTGTGCTTTTATGGTCATGGCATTGCATGGATGTATACTTTCTGAAATACAGGCTCCTGCTGAGCGAAGAGAAGTATTTCGTAGGGAGCTTCAAAGGGTGGGATGCGAAGGCGCTAAAGTGTTACGTGAACTTGGAAACAAACTGAAAACGATGGAGAAAATAGGTCCCATAGATATACTCAATGAAGTGCATGAGGCTGCAGAAGACTTACAAAAGAAAGTTGACCAGAAGTCATACCTGCTTGTTAATTCAGAAAGCTGGGAGATTGGAAGCCGGCCAAAGGAGCTGGGAGAACCTCAAGACTTGTTGAATGCGGATGATGACGAAAATTATTTCCGGGAATACAAGTCCCTTAGTGAAGCTGTACTTGATCTCAGATCTTTTCCTGTGCCACAAAGTTGGGATAGCCAGATGCCCCCGAAGTCAAATGGCACGGGCTCAGTAACAACTGATGTCAACCACTCGAATTTGCCTGCAGGTGTTTCCTCAGGAAGCATGTTCATGAAACAGATTTCATGGCCTGCAGGACTTAAATTCAAGGGTGATGAACCGCCAGCAGCGGAGGAATCCAACACCTATGAAAATGCTAGTCAATTGTCGTTAGCCACATTTACATCCCTGTTGATAGAGTTTGTTGCAAGGCTTCAAAATCTTGTTGACGCGTTTCAAGAATTAAGTGAGAAAGCACATTTCAAGGAATCTATCGAACCACCAGAAGTATTACAGCCACCTCGCGGAAGGTTTTGGACCAGATTGTTCAATCGTCTGAAATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005253 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0015075 GO:0015103 GO:0015140 GO:0015267 GO:0015318 GO:0015556 GO:0015698 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

598

Amino Acids

66.86

Weight (kDa)

7.55

Isoelectric Point (pI)

38.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	71 - 565	1.8e-189	Aluminium activated malate transporter
FUSC_2	PF13515	108 - 230	9.9e-11	Fusaric acid resistance protein-like
FUSC	PF04632	111 - 264	2.4e-06	Fusaric acid resistance protein family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18440
fragaria_vesca	FvH4_5g12330 FvH4_5g12330 FvH4_5g12330 FvH4_5g12330 FvH4_5g12330
malus_domestica	MD06G1214800.v1.1 MD14G1225700.v1.1
prunus_persica	Prupe.5G220200_v2.0.a1
pyrus_communis	pycom06g19140 pycom14g18690
rosa_chinensis	RchiOBHm_Chr7g0185231
rosa_laevigata	RLG00000004929
rosa_multiflora	Rmu_sc0000213.1_g000005 Rmu_sc0008496.1_g000019
rosa_roxburghii	Rroxscaffold_3G00269120
rosa_rugosa	Rorug06G0467100
rosa_samantha	Rh7AG075800 Rh7BG071600 Rh7CG072800 Rh7DG072200
rosa_wichuraiana	Rw7G006000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1484
AasI	GACNNNNNNGTC	1 cut(s)	164
Acc36I	ACCTGC	2 cut(s)	1263, 1484
AccB1I	GGYRCC	1 cut(s)	174
AccB7I	CCANNNNNTGG	1 cut(s)	950
AccI	GTMKAC	1 cut(s)	1051
AccII	CGCG	5 cut(s)	248, 405, 533, 1679, 1752
AclWI	GGATC	3 cut(s)	221, 738, 857
AcoI	YGGCCR	1 cut(s)	1292
AcsI	RAATTY	4 cut(s)	629, 754, 1483, 1550
AdeI	CACNNNGTG	1 cut(s)	674
AfaI	GTAC	2 cut(s)	29, 1383
AfeI	AGCGCT	1 cut(s)	53
AfiI	CCNNNNNNNGG	7 cut(s)	103, 409, 439, 718, 950, 1297, 1751
AflIII	ACRYGT	2 cut(s)	190, 1677
AhdI	GACNNNNNGTC	1 cut(s)	1246
AjnI	CCWGG	3 cut(s)	36, 432, 759
AluBI	AGCT	9 cut(s)	85, 316, 485, 538, 854, 1105, 1275, 1303, 1379
AluI	AGCT	9 cut(s)	85, 316, 485, 538, 854, 1105, 1275, 1303, 1379
Alw21I	GWGCWC	2 cut(s)	87, 1009
Alw26I	GTCTC	3 cut(s)	157, 199, 283
Alw44I	GTGCAC	1 cut(s)	1005
AlwI	GGATC	3 cut(s)	221, 738, 857
Ama87I	CYCGRG	1 cut(s)	196
Aor51HI	AGCGCT	1 cut(s)	53
AoxI	GGCC	3 cut(s)	430, 1292, 1535
ApaLI	GTGCAC	1 cut(s)	1005
ApeKI	GCWGC	7 cut(s)	5, 132, 135, 283, 313, 1214, 1574
ApoI	RAATTY	4 cut(s)	629, 754, 1483, 1550
Asp700I	GAANNNNTTC	2 cut(s)	633, 1092
AspLEI	GCGC	3 cut(s)	54, 268, 1130
AspS9I	GGNCC	3 cut(s)	826, 1181, 1764
AsuC2I	CCSGG	2 cut(s)	203, 1355
AsuHPI	GGTGA	2 cut(s)	737, 1571
AsuNHI	GCTAGC	1 cut(s)	497
AvaI	CYCGRG	1 cut(s)	196
AvaII	GGWCC	3 cut(s)	826, 1181, 1764
AxyI	CCTNAGG	1 cut(s)	1504
BaeGI	GKGCMC	1 cut(s)	1009
BaeI	ACNNNNGTAYC	2 cut(s)	630, 663
BanI	GGYRCC	1 cut(s)	174
BanII	GRGCYC	2 cut(s)	87, 1457
BbsI	GAAGAC	2 cut(s)	235, 1227
Bbv12I	GWGCWC	2 cut(s)	87, 1009
BbvI	GCAGC	7 cut(s)	17, 119, 122, 270, 325, 1201, 1586
BccI	CCATC	5 cut(s)	208, 250, 722, 916, 1162
BceAI	ACGGC	3 cut(s)	100, 289, 657
BcgI	CGANNNNNNTGC	2 cut(s)	490, 524
BciT130I	CCWGG	3 cut(s)	38, 434, 761
BcnI	CCSGG	2 cut(s)	203, 1355
BcoDI	GTCTC	3 cut(s)	157, 199, 283
BfaI	CTAG	2 cut(s)	498, 1605
BfmI	CTRYAG	5 cut(s)	871, 880, 1215, 1491, 1539
BfoI	RGCGCY	3 cut(s)	55, 269, 1131
BfuAI	ACCTGC	2 cut(s)	1263, 1484
BglII	AGATCT	2 cut(s)	884, 1394
BisI	GCNGC	8 cut(s)	6, 133, 136, 284, 314, 322, 1215, 1575
BlpI	GCTNAGC	2 cut(s)	317, 1077
BlsI	GCNGC	8 cut(s)	7, 134, 137, 285, 315, 323, 1216, 1576
Bme1390I	CCNGG	5 cut(s)	38, 203, 434, 761, 1355
Bme18I	GGWCC	3 cut(s)	826, 1181, 1764
BmeRI	GACNNNNNGTC	1 cut(s)	1246
BmeT110I	CYCGRG	1 cut(s)	196
BmgT120I	GGNCC	3 cut(s)	826, 1181, 1764
BmiI	GGNNCC	7 cut(s)	19, 176, 827, 828, 942, 1071, 1183
BmrFI	CCNGG	5 cut(s)	38, 203, 434, 761, 1355
BmrI	ACTGGG	1 cut(s)	680
BmsI	GCATC	3 cut(s)	510, 1109, 1419
BmtI	GCTAGC	1 cut(s)	501
BmuI	ACTGGG	1 cut(s)	680
BpiI	GAAGAC	2 cut(s)	235, 1227
BpmI	CTGGAG	2 cut(s)	447, 489
Bpu1102I	GCTNAGC	2 cut(s)	317, 1077
BpuEI	CTTGAG	1 cut(s)	1299
BpuMI	CCSGG	2 cut(s)	203, 1355
BsaAI	YACGTR	1 cut(s)	1142
BsaJI	CCNNGG	3 cut(s)	403, 760, 977
Bsc4I	CCNNNNNNNGG	7 cut(s)	103, 409, 439, 718, 950, 1297, 1751
Bse118I	RCCGGY	1 cut(s)	1290
Bse1I	ACTGG	1 cut(s)	675
Bse21I	CCTNAGG	1 cut(s)	1504
Bse3DI	GCAATG	1 cut(s)	1037
BseBI	CCWGG	3 cut(s)	38, 434, 761
BseDI	CCNNGG	3 cut(s)	403, 760, 977
BseGI	GGATG	4 cut(s)	1052, 1124, 1339, 1631
BseLI	CCNNNNNNNGG	7 cut(s)	103, 409, 439, 718, 950, 1297, 1751
BseMI	GCAATG	1 cut(s)	1037
BseMII	CTCAG	7 cut(s)	331, 377, 1001, 1068, 1405, 1470, 1518
BseNI	ACTGG	1 cut(s)	675
BseRI	GAGGAG	1 cut(s)	119
BseSI	GKGCMC	1 cut(s)	1009
BseXI	GCAGC	7 cut(s)	17, 119, 122, 270, 325, 1201, 1586
BseYI	CCCAGC	2 cut(s)	1275, 1303
BsgI	GTGCAG	2 cut(s)	121, 719
Bsh1236I	CGCG	5 cut(s)	248, 405, 533, 1679, 1752
Bsh1285I	CGRYCG	1 cut(s)	160
BshFI	GGCC	3 cut(s)	432, 1294, 1537
BshNI	GGYRCC	1 cut(s)	174
BsiEI	CGRYCG	1 cut(s)	160
BsiHKAI	GWGCWC	2 cut(s)	87, 1009
BsiHKCI	CYCGRG	1 cut(s)	196
BsiSI	CCGG	3 cut(s)	202, 1291, 1354
BslFI	GGGAC	4 cut(s)	427, 812, 1167, 1351
BslI	CCNNNNNNNGG	7 cut(s)	103, 409, 439, 718, 950, 1297, 1751
BsmAI	GTCTC	3 cut(s)	157, 199, 283
BsmBI	CGTCTC	1 cut(s)	283
BsmFI	GGGAC	4 cut(s)	427, 812, 1167, 1351
BsmI	GAATGC	2 cut(s)	969, 1333
BsnI	GGCC	3 cut(s)	432, 1294, 1537
BsoBI	CYCGRG	1 cut(s)	196
Bsp1286I	GDGCHC	3 cut(s)	87, 1009, 1457
Bsp143I	GATC	9 cut(s)	146, 226, 237, 273, 730, 862, 884, 1387, 1394
Bsp1720I	GCTNAGC	2 cut(s)	317, 1077
Bsp19I	CCATGG	1 cut(s)	977
BspANI	GGCC	3 cut(s)	432, 1294, 1537
BspCNI	CTCAG	7 cut(s)	330, 378, 1002, 1069, 1404, 1469, 1517
BspFNI	CGCG	5 cut(s)	248, 405, 533, 1679, 1752
BspHI	TCATGA	1 cut(s)	1518
BspLI	GGNNCC	7 cut(s)	19, 176, 827, 828, 942, 1071, 1183
BspMAI	CTGCAG	3 cut(s)	1219, 1495, 1543
BspMI	ACCTGC	2 cut(s)	1263, 1484
BspOI	GCTAGC	1 cut(s)	501
BspPI	GGATC	3 cut(s)	221, 738, 857
BspT107I	GGYRCC	1 cut(s)	174
BsrDI	GCAATG	1 cut(s)	1037
BsrFI	RCCGGY	1 cut(s)	1290
BsrI	ACTGG	1 cut(s)	675
BssAI	RCCGGY	1 cut(s)	1290
BssECI	CCNNGG	3 cut(s)	403, 760, 977
BssMI	GATC	9 cut(s)	146, 226, 237, 273, 730, 862, 884, 1387, 1394
BssNAI	GTATAC	1 cut(s)	1052
BssT1I	CCWWGG	1 cut(s)	977
Bst1107I	GTATAC	1 cut(s)	1052
Bst2UI	CCWGG	3 cut(s)	38, 434, 761
Bst4CI	ACNGT	2 cut(s)	184, 349
Bst6I	CTCTTC	2 cut(s)	38, 1078
BstAPI	GCANNNNNTGC	1 cut(s)	674
BstBAI	YACGTR	1 cut(s)	1142
BstC8I	GCNNGC	8 cut(s)	56, 130, 465, 499, 1292, 1491, 1539, 1572
BstDEI	CTNAG	9 cut(s)	317, 386, 968, 1010, 1077, 1370, 1391, 1456, 1504
BstDSI	CCRYGG	2 cut(s)	403, 977
BstF5I	GGATG	4 cut(s)	1052, 1124, 1339, 1631
BstFNI	CGCG	5 cut(s)	248, 405, 533, 1679, 1752
BstH2I	RGCGCY	3 cut(s)	55, 269, 1131
BstHHI	GCGC	3 cut(s)	54, 268, 1130
BstKTI	GATC	9 cut(s)	149, 229, 240, 276, 733, 865, 887, 1390, 1397
BstMAI	GTCTC	3 cut(s)	157, 199, 283
BstMBI	GATC	9 cut(s)	146, 226, 237, 273, 730, 862, 884, 1387, 1394
BstMCI	CGRYCG	1 cut(s)	160
BstMWI	GCNNNNNNNGC	4 cut(s)	310, 530, 674, 1300
BstNI	CCWGG	3 cut(s)	38, 434, 761
BstNSI	RCATGY	2 cut(s)	194, 1516
BstSCI	CCNGG	5 cut(s)	36, 201, 432, 759, 1353
BstSFI	CTRYAG	5 cut(s)	871, 880, 1215, 1491, 1539
BstSLI	GKGCMC	1 cut(s)	1009
BstUI	CGCG	5 cut(s)	248, 405, 533, 1679, 1752
BstV1I	GCAGC	7 cut(s)	17, 119, 122, 270, 325, 1201, 1586
BstV2I	GAAGAC	2 cut(s)	235, 1227
BstX2I	RGATCY	3 cut(s)	730, 884, 1394
BstXI	CCANNNNNNTGG	1 cut(s)	1416
BstYI	RGATCY	3 cut(s)	730, 884, 1394
BstZ17I	GTATAC	1 cut(s)	1052
Bsu36I	CCTNAGG	1 cut(s)	1504
BsuRI	GGCC	3 cut(s)	432, 1294, 1537
BtgI	CCRYGG	2 cut(s)	403, 977
BtsCI	GGATG	4 cut(s)	1052, 1124, 1339, 1631
BtsIMutI	CAGTG	2 cut(s)	668, 1007
BveI	ACCTGC	2 cut(s)	1263, 1484
Cac8I	GCNNGC	8 cut(s)	56, 130, 465, 499, 1292, 1491, 1539, 1572
CciI	TCATGA	1 cut(s)	1518
CfoI	GCGC	3 cut(s)	54, 268, 1130
Cfr10I	RCCGGY	1 cut(s)	1290
Cfr13I	GGNCC	3 cut(s)	826, 1181, 1764
Cfr42I	CCGCGG	1 cut(s)	406
CseI	GACGC	2 cut(s)	923, 1685
Csp6I	GTAC	2 cut(s)	28, 1382
CviQI	GTAC	2 cut(s)	28, 1382
DdeI	CTNAG	9 cut(s)	317, 386, 968, 1010, 1077, 1370, 1391, 1456, 1504
DpnI	GATC	9 cut(s)	148, 228, 239, 275, 732, 864, 886, 1389, 1396
DpnII	GATC	9 cut(s)	146, 226, 237, 273, 730, 862, 884, 1387, 1394
DraIII	CACNNNGTG	1 cut(s)	674
DrdI	GACNNNNNNGTC	1 cut(s)	164
DriI	GACNNNNNGTC	1 cut(s)	1246
DseDI	GACNNNNNNGTC	1 cut(s)	164
EaeI	YGGCCR	1 cut(s)	1292
Eam1104I	CTCTTC	2 cut(s)	38, 1078
Eam1105I	GACNNNNNGTC	1 cut(s)	1246
EarI	CTCTTC	2 cut(s)	38, 1078
Ecl136II	GAGCTC	1 cut(s)	85
Eco130I	CCWWGG	1 cut(s)	977
Eco147I	AGGCCT	1 cut(s)	432
Eco24I	GRGCYC	2 cut(s)	87, 1457
Eco32I	GATATC	1 cut(s)	974
Eco47I	GGWCC	3 cut(s)	826, 1181, 1764
Eco47III	AGCGCT	1 cut(s)	53
Eco53kI	GAGCTC	1 cut(s)	85
Eco81I	CCTNAGG	1 cut(s)	1504
Eco88I	CYCGRG	1 cut(s)	196
EcoICRI	GAGCTC	1 cut(s)	85
EcoO109I	RGGNCCY	2 cut(s)	826, 1181
EcoRII	CCWGG	3 cut(s)	36, 432, 759
EcoRV	GATATC	1 cut(s)	974
EcoT14I	CCWWGG	1 cut(s)	977
EcoT22I	ATGCAT	1 cut(s)	707
EcoT38I	GRGCYC	2 cut(s)	87, 1457
ErhI	CCWWGG	1 cut(s)	977
Esp3I	CGTCTC	1 cut(s)	283
FalI	AAGNNNNNCTT	4 cut(s)	227, 259, 1368, 1400
FaqI	GGGAC	4 cut(s)	427, 812, 1167, 1351
FauI	CCCGC	3 cut(s)	137, 241, 398
FblI	GTMKAC	1 cut(s)	1051
Fnu4HI	GCNGC	8 cut(s)	6, 133, 136, 284, 314, 322, 1215, 1575
FokI	GGATG	4 cut(s)	1059, 1131, 1346, 1618
FriOI	GRGCYC	2 cut(s)	87, 1457
Fsp4HI	GCNGC	8 cut(s)	6, 133, 136, 284, 314, 322, 1215, 1575
FspBI	CTAG	2 cut(s)	498, 1605
GlaI	GCGC	3 cut(s)	53, 267, 1129
GluI	GCNGC	8 cut(s)	6, 133, 136, 284, 314, 322, 1215, 1575
GsaI	CCCAGC	2 cut(s)	1279, 1307
GsuI	CTGGAG	2 cut(s)	447, 489
HaeII	RGCGCY	3 cut(s)	55, 269, 1131
HaeIII	GGCC	3 cut(s)	432, 1294, 1537
HapII	CCGG	3 cut(s)	202, 1291, 1354
HgaI	GACGC	2 cut(s)	923, 1685
HhaI	GCGC	3 cut(s)	54, 268, 1130
Hin6I	GCGC	3 cut(s)	52, 266, 1128
HinP1I	GCGC	3 cut(s)	52, 266, 1128
HincII	GTYRAC	5 cut(s)	588, 793, 1240, 1474, 1675
HindII	GTYRAC	5 cut(s)	588, 793, 1240, 1474, 1675
HindIII	AAGCTT	1 cut(s)	852
HinfI	GANTC	8 cut(s)	162, 382, 654, 838, 896, 927, 1583, 1715
HpaI	GTTAAC	1 cut(s)	793
HpaII	CCGG	3 cut(s)	202, 1291, 1354
HphI	GGTGA	2 cut(s)	737, 1571
Hpy166II	GTNNAC	9 cut(s)	97, 588, 793, 1007, 1052, 1145, 1240, 1474, 1675
Hpy188III	TCNNGA	8 cut(s)	67, 196, 651, 1316, 1506, 1519, 1685, 1791
Hpy8I	GTNNAC	9 cut(s)	97, 588, 793, 1007, 1052, 1145, 1240, 1474, 1675
Hpy99I	CGWCG	2 cut(s)	121, 170
HpyAV	CCTTC	6 cut(s)	31, 64, 776, 840, 1118, 1749
HpyCH4III	ACNGT	2 cut(s)	184, 349
HpyCH4IV	ACGT	2 cut(s)	416, 1141
HpyF10VI	GCNNNNNNNGC	4 cut(s)	310, 530, 674, 1300
HpyF3I	CTNAG	9 cut(s)	317, 386, 968, 1010, 1077, 1370, 1391, 1456, 1504
HpySE526I	ACGT	2 cut(s)	416, 1141
HspAI	GCGC	3 cut(s)	52, 266, 1128
KflI	GGGWCCC	1 cut(s)	826
KroI	GCCGGC	1 cut(s)	1290
KroNI	GCCGGC	1 cut(s)	1292
KspAI	GTTAAC	1 cut(s)	793
KspI	CCGCGG	1 cut(s)	406
Kzo9I	GATC	9 cut(s)	146, 226, 237, 273, 730, 862, 884, 1387, 1394
LmnI	GCTCC	6 cut(s)	106, 377, 940, 1075, 1102, 1300
Lsp1109I	GCAGC	7 cut(s)	17, 119, 122, 270, 325, 1201, 1586
LweI	GCATC	3 cut(s)	510, 1109, 1419
MaeI	CTAG	2 cut(s)	498, 1605
MaeII	ACGT	2 cut(s)	416, 1141
MaeIII	GTNAC	2 cut(s)	1137, 1459
MalI	GATC	9 cut(s)	148, 228, 239, 275, 732, 864, 886, 1389, 1396
MboI	GATC	9 cut(s)	146, 226, 237, 273, 730, 862, 884, 1387, 1394
MboII	GAAGA	9 cut(s)	55, 235, 265, 283, 491, 626, 994, 1095, 1232
MfeI	CAATTG	1 cut(s)	1610
MflI	RGATCY	3 cut(s)	730, 884, 1394
MhlI	GDGCHC	3 cut(s)	87, 1009, 1457
MluI	ACGCGT	1 cut(s)	1677
MlyI	GAGTC	1 cut(s)	376
MmeI	TCCRAC	2 cut(s)	180, 1611
Mph1103I	ATGCAT	1 cut(s)	707
MroNI	GCCGGC	1 cut(s)	1290
MroXI	GAANNNNTTC	2 cut(s)	633, 1092
MseI	TTAA	6 cut(s)	399, 792, 804, 1263, 1548, 1691
MslI	CAYNNNNRTG	2 cut(s)	605, 1517
MspA1I	CMGCKG	3 cut(s)	132, 405, 1577
MspI	CCGG	3 cut(s)	202, 1291, 1354
MspR9I	CCNGG	5 cut(s)	38, 203, 434, 761, 1355
MunI	CAATTG	1 cut(s)	1610
Mva1269I	GAATGC	2 cut(s)	969, 1333
MvaI	CCWGG	3 cut(s)	38, 434, 761
MvnI	CGCG	5 cut(s)	248, 405, 533, 1679, 1752
MwoI	GCNNNNNNNGC	4 cut(s)	310, 530, 674, 1300
NaeI	GCCGGC	1 cut(s)	1292
NciI	CCSGG	2 cut(s)	203, 1355
NcoI	CCATGG	1 cut(s)	977
NdeII	GATC	9 cut(s)	146, 226, 237, 273, 730, 862, 884, 1387, 1394
NgoMIV	GCCGGC	1 cut(s)	1290
NheI	GCTAGC	1 cut(s)	497
NlaIV	GGNNCC	7 cut(s)	19, 176, 827, 828, 942, 1071, 1183
NsiI	ATGCAT	1 cut(s)	707
NspI	RCATGY	2 cut(s)	194, 1516
PaeR7I	CTCGAG	1 cut(s)	196
PagI	TCATGA	1 cut(s)	1518
PaqCI	CACCTGC	1 cut(s)	1484
PceI	AGGCCT	1 cut(s)	432
PciI	ACATGT	1 cut(s)	190
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PctI	GAATGC	2 cut(s)	969, 1333
PdiI	GCCGGC	1 cut(s)	1292
PdmI	GAANNNNTTC	2 cut(s)	633, 1092
PfeI	GAWTC	7 cut(s)	162, 654, 838, 896, 927, 1583, 1715
PflMI	CCANNNNNTGG	1 cut(s)	950
PfoI	TCCNGGA	2 cut(s)	36, 1353
PkrI	GCNGC	8 cut(s)	7, 134, 137, 285, 315, 323, 1216, 1576
PleI	GAGTC	1 cut(s)	376
PpsI	GAGTC	1 cut(s)	376
Ppu21I	YACGTR	1 cut(s)	1142
PpuMI	RGGWCCY	2 cut(s)	826, 1181
PscI	ACATGT	1 cut(s)	190
Psp124BI	GAGCTC	1 cut(s)	87
Psp5II	RGGWCCY	2 cut(s)	826, 1181
Psp6I	CCWGG	3 cut(s)	36, 432, 759
PspFI	CCCAGC	2 cut(s)	1275, 1303
PspGI	CCWGG	3 cut(s)	36, 432, 759
PspN4I	GGNNCC	7 cut(s)	19, 176, 827, 828, 942, 1071, 1183
PspPI	GGNCC	3 cut(s)	826, 1181, 1764
PspPPI	RGGWCCY	2 cut(s)	826, 1181
PstI	CTGCAG	3 cut(s)	1219, 1495, 1543
PsuI	RGATCY	3 cut(s)	730, 884, 1394
RsaI	GTAC	2 cut(s)	29, 1383
RsaNI	GTAC	2 cut(s)	28, 1382
RseI	CAYNNNNRTG	2 cut(s)	605, 1517
SacI	GAGCTC	1 cut(s)	87
SacII	CCGCGG	1 cut(s)	406
SaqAI	TTAA	6 cut(s)	399, 792, 804, 1263, 1548, 1691
SatI	GCNGC	8 cut(s)	6, 133, 136, 284, 314, 322, 1215, 1575
Sau3AI	GATC	9 cut(s)	146, 226, 237, 273, 730, 862, 884, 1387, 1394
Sau96I	GGNCC	3 cut(s)	826, 1181, 1764
SbfI	CCTGCAGG	2 cut(s)	1495, 1543
SchI	GAGTC	1 cut(s)	376
ScrFI	CCNGG	5 cut(s)	38, 203, 434, 761, 1355
SdaI	CCTGCAGG	2 cut(s)	1495, 1543
SduI	GDGCHC	3 cut(s)	87, 1009, 1457
SfaNI	GCATC	3 cut(s)	510, 1109, 1419
SfcI	CTRYAG	5 cut(s)	871, 880, 1215, 1491, 1539
Sfr274I	CTCGAG	1 cut(s)	196
Sfr303I	CCGCGG	1 cut(s)	406
SgrBI	CCGCGG	1 cut(s)	406
SinI	GGWCC	3 cut(s)	826, 1181, 1764
SlaI	CTCGAG	1 cut(s)	196
SmiMI	CAYNNNNRTG	2 cut(s)	605, 1517
SmlI	CTYRAG	2 cut(s)	196, 1314
SmoI	CTYRAG	2 cut(s)	196, 1314
Sse8387I	CCTGCAGG	2 cut(s)	1495, 1543
SseBI	AGGCCT	1 cut(s)	432
SspMI	CTAG	2 cut(s)	498, 1605
SstI	GAGCTC	1 cut(s)	87
StuI	AGGCCT	1 cut(s)	432
StyD4I	CCNGG	5 cut(s)	36, 201, 432, 759, 1353
StyI	CCWWGG	1 cut(s)	977
TaaI	ACNGT	2 cut(s)	184, 349
TaiI	ACGT	2 cut(s)	419, 1144
TaqI	TCGA	7 cut(s)	102, 197, 363, 652, 955, 1481, 1722
TaqII	GACCGA	1 cut(s)	174
TatI	WGTACW	2 cut(s)	27, 1381
TauI	GCSGC	1 cut(s)	324
TfiI	GAWTC	7 cut(s)	162, 654, 838, 896, 927, 1583, 1715
Tru1I	TTAA	6 cut(s)	399, 792, 804, 1263, 1548, 1691
Tru9I	TTAA	6 cut(s)	399, 792, 804, 1263, 1548, 1691
TscAI	CASTG	2 cut(s)	675, 1014
TseI	GCWGC	7 cut(s)	5, 132, 135, 283, 313, 1214, 1574
TspGWI	ACGGA	2 cut(s)	52, 319
TspRI	CASTG	2 cut(s)	675, 1014
Van91I	CCANNNNNTGG	1 cut(s)	950
VneI	GTGCAC	1 cut(s)	1005
VpaK11BI	GGWCC	3 cut(s)	826, 1181, 1764
XapI	RAATTY	4 cut(s)	629, 754, 1483, 1550
XceI	RCATGY	2 cut(s)	194, 1516
XhoI	CTCGAG	1 cut(s)	196
XmiI	GTMKAC	1 cut(s)	1051
XmnI	GAANNNNTTC	2 cut(s)	633, 1092
XspI	CTAG	2 cut(s)	498, 1605
Zsp2I	ATGCAT	1 cut(s)	707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.