Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0009313

Physical Location & Seq

Genomic Coordinates Forward (+)

62054000 .. 62059550

Gene Structure 5551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00269120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGACGGACAAGTTCTGCTCCATGCTCATGAGGATCAATATCGATTGCAATGGTTGTTACAGAAAAGTAAAGAGAGCCCTTCTGGATATGCGAGAACTGGAGACACATTTGATAGAGAAAAAGGAGTGCAGGGTGAGCGTGTATGGTAGATTCATCCCACAAGACGTAGCAATCAAGATTAGGAAGAAGACTAATCGCCGAGTTGAGATACTCGACATACAAGAACTTCAGAATGGCAGCACCCAAGTTGGGTTCGTTCAAGCGCAGCTTCCAAGAGAAAAAGAGAGGCTTCTCTCCACCAACAAGCGCTATTCTGAGGTGAGTGTCTTCCCAATCGAGGAACAAGAGCCGTATGGCTCTTCTGGCTCTTCTTCGCGTTGGTGTTGCAGTTTCCGGTCGGTTTCCGATAAGGTTGTGGGGTGGTGCCGGACTGTGCAAGGCGTTTCTCGTCGGGCAATTAAAATGGGCCAGTCTGATCCCAGAAAGATCGTCTTCTCCGCGAAGATGGGTCTGGCTCTGATGCTCATTTCTTTGCTGATTTTCCTCAAAGAGCCCTTCAAGCAGCTCAGTCGATACTCGGTTTGGGCCATTCTCACTGTTGTGGTCGTGTTTGAATTTAGCATAGGAGCTACTTTGAGCAAAGGATTTAACCGTGGCTTGGGGACATTGTCTGCTGGAGGCCTTGCATTGGGTATGGCAGAGTTATCGGGGTTAGCTGGAGAGTGGGAAGAAGCTGTTATTGTCGCCAGTATCTTTATCATAGGATTTATTGCAACATATGCAAAACTATACCCGACGATGAAGCCTTATGAGTACGGATTTCGGGTGTTCTTGTTGACGTATTGTTTCATCATGGTATCTGGGTATAGGACGAGGGAATTTGTTCATACGGCTGTGTCACGATTCTTGCTCATTGCATTAGGTGCTGGTGTTGGTTTGGGAGTAAATATATTGATATATCCCATCTGGGCTGGTGAGGATCTACACAAGTTGGTGGCAAAAAATTTCATGGGCGTTGCAAAATCTTTGGAAGGTTGCGTCAGTAGTTACCTCAACTGTATTGAATATGAGAGGATCCCTTCCAAAATTCTTACCTACCAAGCTTCTGATGACCCACTTTACAGTGGATACAGATCTGCTGTAGAATCTACAAGCCAAGAGGATGCTCTGATGGGATTTGCTATCTGGGAGCCACCTCATGGTCGTTACAAGATGCTTAGATATCCATGGAAGAACTATGTAAAAGTCAGTGGTGCACTAAGGCATTGTGCTTTTACGGTCATGGCATTGCATGGATGTGTACTTTCTGAGATACAGGCTCCGGCTGAGCGAAGACAAGTATTTAGTAGGGAGCTTCAAAGAGTAGGTTACGAAGGTGCTAAAGTGTTATGTGAACTTGGAAACAAACTGAAAAAGATGGAGAAAATAGGTCCAATAGATATACTCAATGAAGTGCATGAGGCTGCAGAAGAGTTGCAAAAGAAAATTGACCAGAAATCATATCTTCTTGTCAATTCAGAAAGCTGGGAGATAGGCAATCGGCCAAAGGAGCTGGCAGAAATTCAAGACCTCCTGAACTTGGATGATGAGGAGAATAAATTCCATGAATACAAATCCCTTAGTGAAGCGGTACTGGATCTCAGATCTTTTCCTGGGTCACAAAGTTGGGATGATCCTGTACCAGCGAAATCTGCCAGCTTGAACACCTCGCCTCCTGATAGCAACCCCTCCAACCTGCCAGTACCCTCAGGAAAAATGTTCATGAAACAGATCTCGTGGCCTGCAGGAATGACATTTAAGGCTCATGCAGAGCCACAAGCGGAAGAATCAAATACCTATCAAAATGCTAGTCAATTGTCATTGGCCACGTTCACATCCCTGCTGATAGAATTTGTTGCAAGGCTTCAAAATCTTGTCGACTCGTTTGAGGAATTGGGTGAGACAGCACTTTTCAAGGAACCTGTTGACTTGCCGGAACCATTAGAGTCACACGGCGGGTTTTGGACCAGATTGCTCGACTGTCTGAAGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005253 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0015075 GO:0015103 GO:0015140 GO:0015267 GO:0015318 GO:0015556 GO:0015698 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

677

Amino Acids

76.17

Weight (kDa)

7.82

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	154 - 646	2.8e-190	Aluminium activated malate transporter
FUSC_2	PF13515	192 - 313	8e-11	Fusaric acid resistance protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18440
fragaria_vesca	FvH4_5g12330 FvH4_5g12330 FvH4_5g12330 FvH4_5g12330 FvH4_5g12330
malus_domestica	MD06G1214800.v1.1 MD14G1225700.v1.1
prunus_persica	Prupe.5G220200_v2.0.a1
pyrus_communis	pycom06g19140 pycom14g18690
rosa_chinensis	RchiOBHm_Chr7g0185231
rosa_laevigata	RLG00000004929
rosa_multiflora	Rmu_sc0000213.1_g000005 Rmu_sc0008496.1_g000019
rosa_roxburghii	Rroxscaffold_3G00269120
rosa_rugosa	Rorug06G0467100
rosa_samantha	Rh7AG075800 Rh7BG071600 Rh7CG072800 Rh7DG072200
rosa_wichuraiana	Rw7G006000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1743
AccB1I	GGYRCC	1 cut(s)	423
AccB7I	CCANNNNNTGG	1 cut(s)	1199
AccI	GTMKAC	1 cut(s)	1917
AccII	CGCG	2 cut(s)	376, 500
AciI	CCGC	4 cut(s)	498, 1628, 1820, 1995
AclWI	GGATC	7 cut(s)	41, 470, 987, 1069, 1082, 1644, 1667
AcoI	YGGCCR	2 cut(s)	1541, 1863
AcsI	RAATTY	7 cut(s)	614, 878, 1003, 1086, 1560, 1598, 1889
AcuI	CTGAAG	1 cut(s)	212
AfaI	GTAC	5 cut(s)	815, 1302, 1632, 1680, 1743
AfeI	AGCGCT	1 cut(s)	308
AfiI	CCNNNNNNNGG	6 cut(s)	249, 337, 658, 688, 1199, 1579
AgsI	TTSAA	9 cut(s)	260, 559, 614, 1064, 1358, 1565, 1702, 1907, 1954
AjnI	CCWGG	1 cut(s)	1651
AleI	CACNNNNGTG	1 cut(s)	599
Alw21I	GWGCWC	1 cut(s)	1258
Alw26I	GTCTC	2 cut(s)	95, 1934
Alw44I	GTGCAC	1 cut(s)	1254
AlwI	GGATC	7 cut(s)	41, 470, 987, 1069, 1082, 1644, 1667
Aor51HI	AGCGCT	1 cut(s)	308
AoxI	GGCC	6 cut(s)	466, 585, 679, 1541, 1778, 1863
ApaLI	GTGCAC	1 cut(s)	1254
ApeKI	GCWGC	4 cut(s)	237, 265, 562, 1463
ApoI	RAATTY	7 cut(s)	614, 878, 1003, 1086, 1560, 1598, 1889
ArsI	GACNNNNNNTTYG	2 cut(s)	1834, 1866
Asp700I	GAANNNNTTC	2 cut(s)	882, 1598
AspLEI	GCGC	2 cut(s)	265, 309
AspS9I	GGNCC	4 cut(s)	466, 585, 1430, 2004
AsuHPI	GGTGA	4 cut(s)	145, 331, 986, 1949
AvaII	GGWCC	2 cut(s)	1430, 2004
AxyI	CCTNAGG	1 cut(s)	1747
BaeGI	GKGCMC	1 cut(s)	1258
BalI	TGGCCA	1 cut(s)	1865
BamHI	GGATCC	1 cut(s)	1074
BanI	GGYRCC	1 cut(s)	423
BanII	GRGCYC	2 cut(s)	79, 555
BauI	CACGAG	1 cut(s)	1774
BbsI	GAAGAC	4 cut(s)	194, 319, 484, 1339
Bbv12I	GWGCWC	1 cut(s)	1258
BbvI	GCAGC	4 cut(s)	249, 277, 574, 1450
BccI	CCATC	4 cut(s)	499, 971, 1165, 1411
BceAI	ACGGC	3 cut(s)	334, 906, 2008
BcgI	CGANNNNNNTGC	4 cut(s)	551, 585, 687, 721
BciT130I	CCWGG	1 cut(s)	1653
BciVI	GTATCC	1 cut(s)	1121
BcoDI	GTCTC	2 cut(s)	95, 1934
BfaI	CTAG	1 cut(s)	1848
BfmI	CTRYAG	3 cut(s)	1140, 1464, 1782
BfoI	RGCGCY	1 cut(s)	310
BfuAI	ACCTGC	1 cut(s)	1743
BfuI	GTATCC	1 cut(s)	1121
BglII	AGATCT	3 cut(s)	1133, 1643, 1770
BisI	GCNGC	4 cut(s)	238, 266, 563, 1464
BlpI	GCTNAGC	1 cut(s)	1326
BlsI	GCNGC	4 cut(s)	239, 267, 564, 1465
Bme1390I	CCNGG	1 cut(s)	1653
Bme18I	GGWCC	2 cut(s)	1430, 2004
BmgT120I	GGNCC	4 cut(s)	466, 585, 1430, 2004
BmiI	GGNNCC	6 cut(s)	425, 1076, 1191, 1320, 1959, 1977
BmrFI	CCNGG	1 cut(s)	1653
BmsI	GCATC	3 cut(s)	510, 1153, 1203
BpiI	GAAGAC	4 cut(s)	194, 319, 484, 1339
BpmI	CTGGAG	3 cut(s)	119, 696, 738
Bpu1102I	GCTNAGC	1 cut(s)	1326
Bsa29I	ATCGAT	1 cut(s)	42
BsaBI	GATNNNNATC	2 cut(s)	38, 1132
BsaJI	CCNNGG	3 cut(s)	652, 1226, 1652
BsaWI	WCCGGW	1 cut(s)	393
BsaXI	ACNNNNNCTCC	2 cut(s)	1696, 1726
Bsc4I	CCNNNNNNNGG	6 cut(s)	249, 337, 658, 688, 1199, 1579
Bse1I	ACTGG	5 cut(s)	102, 469, 747, 1638, 1739
Bse21I	CCTNAGG	1 cut(s)	1747
Bse3DI	GCAATG	3 cut(s)	55, 912, 1286
Bse8I	GATNNNNATC	2 cut(s)	38, 1132
BseBI	CCWGG	1 cut(s)	1653
BseCI	ATCGAT	1 cut(s)	42
BseDI	CCNNGG	3 cut(s)	652, 1226, 1652
BseGI	GGATG	6 cut(s)	153, 1168, 1301, 1588, 1675, 1874
BseJI	GATNNNNATC	2 cut(s)	38, 1132
BseLI	CCNNNNNNNGG	6 cut(s)	249, 337, 658, 688, 1199, 1579
BseMI	GCAATG	3 cut(s)	55, 912, 1286
BseMII	CTCAG	6 cut(s)	306, 580, 1299, 1317, 1654, 1761
BseNI	ACTGG	5 cut(s)	102, 469, 747, 1638, 1739
BseRI	GAGGAG	1 cut(s)	1604
BseSI	GKGCMC	1 cut(s)	1258
BseXI	GCAGC	4 cut(s)	249, 277, 574, 1450
BseYI	CCCAGC	1 cut(s)	1524
BsgI	GTGCAG	1 cut(s)	148
Bsh1236I	CGCG	2 cut(s)	376, 500
Bsh1285I	CGRYCG	1 cut(s)	398
BshFI	GGCC	6 cut(s)	468, 587, 681, 1543, 1780, 1865
BshNI	GGYRCC	1 cut(s)	423
BshVI	ATCGAT	1 cut(s)	42
BsiEI	CGRYCG	1 cut(s)	398
BsiHKAI	GWGCWC	1 cut(s)	1258
BsiSI	CCGG	4 cut(s)	394, 427, 1322, 1973
BslFI	GGGAC	1 cut(s)	676
BslI	CCNNNNNNNGG	6 cut(s)	249, 337, 658, 688, 1199, 1579
BsmAI	GTCTC	2 cut(s)	95, 1934
BsmFI	GGGAC	1 cut(s)	676
BsnI	GGCC	6 cut(s)	468, 587, 681, 1543, 1780, 1865
Bsp1286I	GDGCHC	3 cut(s)	79, 555, 1258
Bsp1720I	GCTNAGC	1 cut(s)	1326
Bsp19I	CCATGG	1 cut(s)	1226
BspACI	CCGC	4 cut(s)	498, 1628, 1820, 1995
BspANI	GGCC	6 cut(s)	468, 587, 681, 1543, 1780, 1865
BspCNI	CTCAG	6 cut(s)	307, 579, 1300, 1318, 1653, 1760
BspDI	ATCGAT	1 cut(s)	42
BspFNI	CGCG	2 cut(s)	376, 500
BspHI	TCATGA	3 cut(s)	27, 1761, 2030
BspLI	GGNNCC	6 cut(s)	425, 1076, 1191, 1320, 1959, 1977
BspMAI	CTGCAG	2 cut(s)	1468, 1786
BspMI	ACCTGC	1 cut(s)	1743
BspPI	GGATC	7 cut(s)	41, 470, 987, 1069, 1082, 1644, 1667
BspQI	GCTCTTC	2 cut(s)	364, 373
BspT107I	GGYRCC	1 cut(s)	423
BsrDI	GCAATG	3 cut(s)	55, 912, 1286
BsrI	ACTGG	5 cut(s)	102, 469, 747, 1638, 1739
BssECI	CCNNGG	3 cut(s)	652, 1226, 1652
BssSI	CACGAG	1 cut(s)	1774
BssT1I	CCWWGG	1 cut(s)	1226
Bst2BI	CACGAG	1 cut(s)	1774
Bst2UI	CCWGG	1 cut(s)	1653
Bst4CI	ACNGT	7 cut(s)	433, 598, 653, 1058, 1124, 1279, 2021
Bst6I	CTCTTC	3 cut(s)	364, 373, 1464
BstAPI	GCANNNNNTGC	2 cut(s)	779, 923
BstC8I	GCNNGC	3 cut(s)	1554, 1696, 1782
BstDEI	CTNAG	9 cut(s)	315, 566, 1217, 1259, 1308, 1326, 1619, 1640, 1747
BstDSI	CCRYGG	2 cut(s)	652, 1226
BstF5I	GGATG	6 cut(s)	153, 1168, 1301, 1588, 1675, 1874
BstFNI	CGCG	2 cut(s)	376, 500
BstH2I	RGCGCY	1 cut(s)	310
BstHHI	GCGC	2 cut(s)	265, 309
BstMAI	GTCTC	2 cut(s)	95, 1934
BstMCI	CGRYCG	1 cut(s)	398
BstMWI	GCNNNNNNNGC	7 cut(s)	135, 363, 559, 779, 923, 1549, 1691
BstNI	CCWGG	1 cut(s)	1653
BstSCI	CCNGG	1 cut(s)	1651
BstSFI	CTRYAG	3 cut(s)	1140, 1464, 1782
BstSLI	GKGCMC	1 cut(s)	1258
BstUI	CGCG	2 cut(s)	376, 500
BstV1I	GCAGC	4 cut(s)	249, 277, 574, 1450
BstV2I	GAAGAC	4 cut(s)	194, 319, 484, 1339
BstX2I	RGATCY	6 cut(s)	979, 1074, 1133, 1636, 1643, 1770
BstYI	RGATCY	6 cut(s)	979, 1074, 1133, 1636, 1643, 1770
Bsu15I	ATCGAT	1 cut(s)	42
Bsu36I	CCTNAGG	1 cut(s)	1747
BsuI	GTATCC	1 cut(s)	1121
BsuRI	GGCC	6 cut(s)	468, 587, 681, 1543, 1780, 1865
BsuTUI	ATCGAT	1 cut(s)	42
BtgI	CCRYGG	2 cut(s)	652, 1226
BtsCI	GGATG	6 cut(s)	153, 1168, 1301, 1588, 1675, 1874
BtsIMutI	CAGTG	3 cut(s)	594, 1129, 1255
BveI	ACCTGC	1 cut(s)	1743
Cac8I	GCNNGC	3 cut(s)	1554, 1696, 1782
CciI	TCATGA	3 cut(s)	27, 1761, 2030
CfoI	GCGC	2 cut(s)	265, 309
Cfr13I	GGNCC	4 cut(s)	466, 585, 1430, 2004
ClaI	ATCGAT	1 cut(s)	42
CseI	GACGC	1 cut(s)	1027
Csp6I	GTAC	5 cut(s)	814, 1301, 1631, 1679, 1742
CviQI	GTAC	5 cut(s)	814, 1301, 1631, 1679, 1742
DdeI	CTNAG	9 cut(s)	315, 566, 1217, 1259, 1308, 1326, 1619, 1640, 1747
EaeI	YGGCCR	2 cut(s)	1541, 1863
Eam1104I	CTCTTC	3 cut(s)	364, 373, 1464
EarI	CTCTTC	3 cut(s)	364, 373, 1464
Eco130I	CCWWGG	1 cut(s)	1226
Eco147I	AGGCCT	1 cut(s)	681
Eco24I	GRGCYC	2 cut(s)	79, 555
Eco32I	GATATC	1 cut(s)	1223
Eco47I	GGWCC	2 cut(s)	1430, 2004
Eco47III	AGCGCT	1 cut(s)	308
Eco57I	CTGAAG	1 cut(s)	212
Eco81I	CCTNAGG	1 cut(s)	1747
EcoRII	CCWGG	1 cut(s)	1651
EcoRV	GATATC	1 cut(s)	1223
EcoT14I	CCWWGG	1 cut(s)	1226
EcoT38I	GRGCYC	2 cut(s)	79, 555
ErhI	CCWWGG	1 cut(s)	1226
FalI	AAGNNNNNCTT	6 cut(s)	252, 284, 273, 305, 476, 508
FaqI	GGGAC	1 cut(s)	676
FauI	CCCGC	1 cut(s)	1988
FauNDI	CATATG	1 cut(s)	778
FblI	GTMKAC	1 cut(s)	1917
Fnu4HI	GCNGC	4 cut(s)	238, 266, 563, 1464
FokI	GGATG	6 cut(s)	140, 1175, 1308, 1595, 1682, 1861
FriOI	GRGCYC	2 cut(s)	79, 555
Fsp4HI	GCNGC	4 cut(s)	238, 266, 563, 1464
FspBI	CTAG	1 cut(s)	1848
GlaI	GCGC	2 cut(s)	264, 308
GluI	GCNGC	4 cut(s)	238, 266, 563, 1464
GsaI	CCCAGC	1 cut(s)	1528
GsuI	CTGGAG	3 cut(s)	119, 696, 738
HaeII	RGCGCY	1 cut(s)	310
HaeIII	GGCC	6 cut(s)	468, 587, 681, 1543, 1780, 1865
HapII	CCGG	4 cut(s)	394, 427, 1322, 1973
HgaI	GACGC	1 cut(s)	1027
HhaI	GCGC	2 cut(s)	265, 309
Hin6I	GCGC	2 cut(s)	263, 307
HinP1I	GCGC	2 cut(s)	263, 307
HincII	GTYRAC	3 cut(s)	837, 1918, 1966
HindII	GTYRAC	3 cut(s)	837, 1918, 1966
HindIII	AAGCTT	1 cut(s)	1101
HinfI	GANTC	6 cut(s)	150, 903, 1145, 1826, 1919, 1985
HpaII	CCGG	4 cut(s)	394, 427, 1322, 1973
HphI	GGTGA	4 cut(s)	145, 331, 986, 1949
Hpy166II	GTNNAC	7 cut(s)	837, 1256, 1301, 1394, 1872, 1918, 1966
Hpy8I	GTNNAC	7 cut(s)	837, 1256, 1301, 1394, 1872, 1918, 1966
Hpy99I	CGWCG	2 cut(s)	453, 799
HpyAV	CCTTC	5 cut(s)	89, 565, 1025, 1089, 1367
HpyCH4III	ACNGT	7 cut(s)	433, 598, 653, 1058, 1124, 1279, 2021
HpyCH4IV	ACGT	3 cut(s)	165, 839, 1868
HpyF10VI	GCNNNNNNNGC	7 cut(s)	135, 363, 559, 779, 923, 1549, 1691
HpyF3I	CTNAG	9 cut(s)	315, 566, 1217, 1259, 1308, 1326, 1619, 1640, 1747
HpySE526I	ACGT	3 cut(s)	165, 839, 1868
HspAI	GCGC	2 cut(s)	263, 307
LguI	GCTCTTC	2 cut(s)	364, 373
LmnI	GCTCC	6 cut(s)	23, 626, 1189, 1324, 1351, 1549
Lsp1109I	GCAGC	4 cut(s)	249, 277, 574, 1450
LweI	GCATC	3 cut(s)	510, 1153, 1203
MaeI	CTAG	1 cut(s)	1848
MaeII	ACGT	3 cut(s)	165, 839, 1868
MaeIII	GTNAC	7 cut(s)	56, 897, 1046, 1205, 1367, 1656, 1986
MfeI	CAATTG	1 cut(s)	1853
MflI	RGATCY	6 cut(s)	979, 1074, 1133, 1636, 1643, 1770
MhlI	GDGCHC	3 cut(s)	79, 555, 1258
MlsI	TGGCCA	1 cut(s)	1865
MluNI	TGGCCA	1 cut(s)	1865
MlyI	GAGTC	2 cut(s)	1913, 1994
MmeI	TCCRAC	1 cut(s)	1755
Mox20I	TGGCCA	1 cut(s)	1865
MroXI	GAANNNNTTC	2 cut(s)	882, 1598
MscI	TGGCCA	1 cut(s)	1865
MseI	TTAA	3 cut(s)	459, 648, 1797
MslI	CAYNNNNRTG	3 cut(s)	26, 599, 1296
Msp20I	TGGCCA	1 cut(s)	1865
MspI	CCGG	4 cut(s)	394, 427, 1322, 1973
MspR9I	CCNGG	1 cut(s)	1653
MunI	CAATTG	1 cut(s)	1853
MvaI	CCWGG	1 cut(s)	1653
MvnI	CGCG	2 cut(s)	376, 500
MwoI	GCNNNNNNNGC	7 cut(s)	135, 363, 559, 779, 923, 1549, 1691
NcoI	CCATGG	1 cut(s)	1226
NdeI	CATATG	1 cut(s)	778
NlaIV	GGNNCC	6 cut(s)	425, 1076, 1191, 1320, 1959, 1977
NmeAIII	GCCGAG	1 cut(s)	224
NmuCI	GTSAC	3 cut(s)	897, 1656, 1986
OliI	CACNNNNGTG	1 cut(s)	599
PagI	TCATGA	3 cut(s)	27, 1761, 2030
PceI	AGGCCT	1 cut(s)	681
PciSI	GCTCTTC	2 cut(s)	364, 373
PdmI	GAANNNNTTC	2 cut(s)	882, 1598
PfeI	GAWTC	4 cut(s)	150, 903, 1145, 1826
PflFI	GACNNNGTC	1 cut(s)	667
PflMI	CCANNNNNTGG	1 cut(s)	1199
PkrI	GCNGC	4 cut(s)	239, 267, 564, 1465
PleI	GAGTC	2 cut(s)	1913, 1993
PpsI	GAGTC	2 cut(s)	1913, 1993
Psp6I	CCWGG	1 cut(s)	1651
PspFI	CCCAGC	1 cut(s)	1524
PspGI	CCWGG	1 cut(s)	1651
PspN4I	GGNNCC	6 cut(s)	425, 1076, 1191, 1320, 1959, 1977
PspPI	GGNCC	4 cut(s)	466, 585, 1430, 2004
PstI	CTGCAG	2 cut(s)	1468, 1786
PsuI	RGATCY	6 cut(s)	979, 1074, 1133, 1636, 1643, 1770
PsyI	GACNNNGTC	1 cut(s)	667
RsaI	GTAC	5 cut(s)	815, 1302, 1632, 1680, 1743
RsaNI	GTAC	5 cut(s)	814, 1301, 1631, 1679, 1742
RseI	CAYNNNNRTG	3 cut(s)	26, 599, 1296
SalI	GTCGAC	1 cut(s)	1916
SapI	GCTCTTC	2 cut(s)	364, 373
SaqAI	TTAA	3 cut(s)	459, 648, 1797
SatI	GCNGC	4 cut(s)	238, 266, 563, 1464
Sau96I	GGNCC	4 cut(s)	466, 585, 1430, 2004
SbfI	CCTGCAGG	1 cut(s)	1786
SchI	GAGTC	2 cut(s)	1913, 1994
ScrFI	CCNGG	1 cut(s)	1653
SdaI	CCTGCAGG	1 cut(s)	1786
SduI	GDGCHC	3 cut(s)	79, 555, 1258
SfaNI	GCATC	3 cut(s)	510, 1153, 1203
SfcI	CTRYAG	3 cut(s)	1140, 1464, 1782
SinI	GGWCC	2 cut(s)	1430, 2004
SmiMI	CAYNNNNRTG	3 cut(s)	26, 599, 1296
Sse8387I	CCTGCAGG	1 cut(s)	1786
SseBI	AGGCCT	1 cut(s)	681
SsiI	CCGC	4 cut(s)	498, 1628, 1820, 1995
SspMI	CTAG	1 cut(s)	1848
StuI	AGGCCT	1 cut(s)	681
StyD4I	CCNGG	1 cut(s)	1651
StyI	CCWWGG	1 cut(s)	1226
TaaI	ACNGT	7 cut(s)	433, 598, 653, 1058, 1124, 1279, 2021
TaiI	ACGT	3 cut(s)	168, 842, 1871
TaqI	TCGA	6 cut(s)	42, 213, 336, 571, 1917, 2016
TatI	WGTACW	1 cut(s)	1300
TfiI	GAWTC	4 cut(s)	150, 903, 1145, 1826
Tru1I	TTAA	3 cut(s)	459, 648, 1797
Tru9I	TTAA	3 cut(s)	459, 648, 1797
TscAI	CASTG	3 cut(s)	601, 1129, 1255
TseFI	GTSAC	3 cut(s)	897, 1656, 1986
TseI	GCWGC	4 cut(s)	237, 265, 562, 1463
Tsp45I	GTSAC	3 cut(s)	897, 1656, 1986
TspDTI	ATGAA	9 cut(s)	142, 815, 838, 875, 997, 1464, 1620, 1750, 1778
TspGWI	ACGGA	2 cut(s)	20, 831
TspRI	CASTG	3 cut(s)	601, 1129, 1255
Tth111I	GACNNNGTC	1 cut(s)	667
Van91I	CCANNNNNTGG	1 cut(s)	1199
VneI	GTGCAC	1 cut(s)	1254
VpaK11BI	GGWCC	2 cut(s)	1430, 2004
XapI	RAATTY	7 cut(s)	614, 878, 1003, 1086, 1560, 1598, 1889
XmiI	GTMKAC	1 cut(s)	1917
XmnI	GAANNNNTTC	2 cut(s)	882, 1598
XspI	CTAG	1 cut(s)	1848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.