Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0009313

Physical Location & Seq

Genomic Coordinates Forward (+)

5378787 .. 5383127

Gene Structure 4341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG075800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGCAGCAGCGAAGATGGGTTCGTTCAAGCGCAGCTTCCAAGAGAAAAAAGAGAGGCTTCTCTCCACCAACAAGCGCTATTCCGAGGTGAGTTTCTTCCCAATCGAGGAACTAGAGCCGTATGGCTCTTCTTCTTCTTCTTCTTCGCGTTGGTGTTGCAGTTTCCGGTCGGTTTCCGATAAGGTTGCGGGGTGGTGCCGGACTGTGCAAGGCGTTTCTCGGCGGGCTATTAAAATGGGCCAGTCTGATCCCAGAAAGATCGTCTTCTCCGCGAAGATGGGTCTGGCTCTGATGCTCATTTCTTTGCTGATTTTCCTCAAAGAGCCCTTCAAGCAGCTCAGTCGATACTCGGTTTGGGCCATTCTCACTGTTGTGGTCGTGTTTGAATTTAGCATAGGAGCTACTTTGAGCAAAGGATTTAACCGTGGCTTGGGGACATTGTCTGCTGGAGGCCTTGCATTGGGTATGGCAGAGTTATCGGGGTTAGCTGGAGAGTGGGAAGAAGCTGTTATTGTTGCCAGTATCTTTATCATAGGATTTATTGCAACTTACGCAAAACTATACCCGACGATGAAGCCTTATGAGTACGGATTTCGGGTGTTCTTGTTGACGTATTGTTTCATCATGGTATCTGGGTATAGGACGAGGGAATTTGTCCATACGGCTGTGTCACGATTCTTGCTCATTGCATTGGGTGCTGGTGTTGGTTTGGGAGTAAATATATTGATATATCCCATCTGGGCTGGTGAGGATCTACACAAGTTGGTGGCAAAAAATTTCATGGGCGTTGCAAAATCTTTGGAAGGTTGCGTCAGTACTTACCTCAACTGTATTGAATATGAGAGGATCCCTTCCAAAATTCTTACCTACCAAGCTTCTGATGACCCACTTTACAGTGGATACAGATCTGCTGTAGAATCTACAAGCCAAGAGGATGCTCTGATGGGATTTGCTATCTGGGAGCCACCTCATGGTCGTTACAAGATGCTTAGATATCCATGGAAGAACTATGTAAAAGTCAGTGGTGCACTAAGGCATTGTGCTTTTACGGTCATGGCATTGCATGGATGTGTACTTTCTGAGATACAGGCTCCGGCTGAGCGAAGACAAGTATTTAGTAGGGAGCTTCAAAGAGTAGGTTACGAAGGTGCTAAAGTGTTATGTGAACTTGGAAACAAACTGAAAAAGATGGAGAAAATAGGTCCAATAGATATACTCAATGAAGTGCATGAGGCTGCAGAAGAGTTGCAAAAGAAAATTGACCAGAAATCATATCTTCTTGTCAATTCAGAAAGCTGGGAGATAGGCAATCGGCCAAAGGAGCTGGCAGAAATTCAAGACCTCCTGGACTTGGATGATGAGGAGAATAAATTCCACGAATACAAATCCCTTAGTGAAGCGGTACTGGATCTCAGATCTTTTCCTGGGTCACAAAGTTGGGATGATCCTGTACCAGCGAAATCTGCCAGCTTGAACACCTCGCCTCCTGATAGCAACCCCTCCAACCTGCCAGTACCCCCAGGAAAAATGTTCATGAAACAGATCTCGTGGCCTGCAGGAATGACATTTAAGGCTCATGCAGAGCCACAAGTGGAAGAATCAAATACCTATCAAAATGCTAGTCAATTGTCATTGGCCACGTTCACATCCCTGCTGATAGAATTTGTTGCAAGGCTTCAAAATCTTGTCGACTCGTTTGAGGAATTGGGTGAGACAGCACTTTTCAAGGAACCTGTTGACTTGCCGGAACCATTAGAGTCACACGGCGGGTTTTGGACCAGATTGCTCGACTGTCTTAAGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005253 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0015075 GO:0015103 GO:0015140 GO:0015267 GO:0015318 GO:0015556 GO:0015698 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

601

Amino Acids

67.23

Weight (kDa)

6.56

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	78 - 570	1.3e-189	Aluminium activated malate transporter
FUSC_2	PF13515	116 - 237	6.6e-11	Fusaric acid resistance protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18440
fragaria_vesca	FvH4_5g12330 FvH4_5g12330 FvH4_5g12330 FvH4_5g12330 FvH4_5g12330
malus_domestica	MD06G1214800.v1.1 MD14G1225700.v1.1
prunus_persica	Prupe.5G220200_v2.0.a1
pyrus_communis	pycom06g19140 pycom14g18690
rosa_chinensis	RchiOBHm_Chr7g0185231
rosa_laevigata	RLG00000004929
rosa_multiflora	Rmu_sc0000213.1_g000005 Rmu_sc0008496.1_g000019
rosa_roxburghii	Rroxscaffold_3G00269120
rosa_rugosa	Rorug06G0467100
rosa_samantha	Rh7AG075800 Rh7BG071600 Rh7CG072800 Rh7DG072200
rosa_wichuraiana	Rw7G006000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1515
AccB1I	GGYRCC	1 cut(s)	195
AccB7I	CCANNNNNTGG	1 cut(s)	971
AccI	GTMKAC	1 cut(s)	1689
AccII	CGCG	2 cut(s)	148, 272
AciI	CCGC	5 cut(s)	188, 223, 270, 1400, 1767
AclWI	GGATC	6 cut(s)	242, 759, 841, 854, 1416, 1439
AcoI	YGGCCR	2 cut(s)	1313, 1635
AcsI	RAATTY	7 cut(s)	386, 650, 775, 858, 1332, 1370, 1661
AfaI	GTAC	6 cut(s)	587, 817, 1074, 1404, 1452, 1515
AfeI	AGCGCT	1 cut(s)	77
AfiI	CCNNNNNNNGG	5 cut(s)	106, 430, 460, 971, 1351
AflII	CTTAAG	1 cut(s)	1796
AgsI	TTSAA	9 cut(s)	28, 331, 386, 836, 1130, 1337, 1474, 1679, 1726
AjnI	CCWGG	3 cut(s)	1344, 1423, 1519
AleI	CACNNNNGTG	1 cut(s)	371
Alw21I	GWGCWC	1 cut(s)	1030
Alw26I	GTCTC	1 cut(s)	1706
Alw44I	GTGCAC	1 cut(s)	1026
AlwI	GGATC	6 cut(s)	242, 759, 841, 854, 1416, 1439
Aor51HI	AGCGCT	1 cut(s)	77
AoxI	GGCC	6 cut(s)	238, 357, 451, 1313, 1550, 1635
ApaLI	GTGCAC	1 cut(s)	1026
ApeKI	GCWGC	5 cut(s)	5, 8, 33, 334, 1235
ApoI	RAATTY	7 cut(s)	386, 650, 775, 858, 1332, 1370, 1661
ArsI	GACNNNNNNTTYG	2 cut(s)	1606, 1638
Asp700I	GAANNNNTTC	1 cut(s)	1370
AspLEI	GCGC	2 cut(s)	33, 78
AspS9I	GGNCC	4 cut(s)	238, 357, 1202, 1776
AsuHPI	GGTGA	3 cut(s)	100, 758, 1721
AvaII	GGWCC	2 cut(s)	1202, 1776
BaeGI	GKGCMC	1 cut(s)	1030
BalI	TGGCCA	1 cut(s)	1637
BamHI	GGATCC	1 cut(s)	846
BanI	GGYRCC	1 cut(s)	195
BanII	GRGCYC	1 cut(s)	327
BauI	CACGAG	1 cut(s)	1546
BbsI	GAAGAC	2 cut(s)	256, 1111
Bbv12I	GWGCWC	1 cut(s)	1030
BbvI	GCAGC	5 cut(s)	17, 20, 45, 346, 1222
BccI	CCATC	5 cut(s)	10, 271, 743, 937, 1183
BceAI	ACGGC	3 cut(s)	103, 678, 1780
BcgI	CGANNNNNNTGC	6 cut(s)	167, 201, 323, 357, 459, 493
BciT130I	CCWGG	3 cut(s)	1346, 1425, 1521
BciVI	GTATCC	1 cut(s)	893
BcoDI	GTCTC	1 cut(s)	1706
BfaI	CTAG	2 cut(s)	113, 1620
BfmI	CTRYAG	3 cut(s)	912, 1236, 1554
BfoI	RGCGCY	1 cut(s)	79
BfrI	CTTAAG	1 cut(s)	1796
BfuAI	ACCTGC	1 cut(s)	1515
BfuI	GTATCC	1 cut(s)	893
BglII	AGATCT	3 cut(s)	905, 1415, 1542
BisI	GCNGC	5 cut(s)	6, 9, 34, 335, 1236
BlpI	GCTNAGC	1 cut(s)	1098
BlsI	GCNGC	5 cut(s)	7, 10, 35, 336, 1237
BmcAI	AGTACT	1 cut(s)	817
Bme1390I	CCNGG	3 cut(s)	1346, 1425, 1521
Bme18I	GGWCC	2 cut(s)	1202, 1776
BmgT120I	GGNCC	4 cut(s)	238, 357, 1202, 1776
BmiI	GGNNCC	6 cut(s)	197, 848, 963, 1092, 1731, 1749
BmrFI	CCNGG	3 cut(s)	1346, 1425, 1521
BmsI	GCATC	3 cut(s)	282, 925, 975
BpiI	GAAGAC	2 cut(s)	256, 1111
BpmI	CTGGAG	2 cut(s)	468, 510
Bpu1102I	GCTNAGC	1 cut(s)	1098
BsaBI	GATNNNNATC	1 cut(s)	904
BsaJI	CCNNGG	5 cut(s)	84, 424, 998, 1424, 1519
BsaWI	WCCGGW	1 cut(s)	165
BsaXI	ACNNNNNCTCC	2 cut(s)	1468, 1498
Bsc4I	CCNNNNNNNGG	5 cut(s)	106, 430, 460, 971, 1351
Bse1I	ACTGG	4 cut(s)	241, 519, 1410, 1511
Bse3DI	GCAATG	2 cut(s)	684, 1058
Bse8I	GATNNNNATC	1 cut(s)	904
BseBI	CCWGG	3 cut(s)	1346, 1425, 1521
BseDI	CCNNGG	5 cut(s)	84, 424, 998, 1424, 1519
BseGI	GGATG	5 cut(s)	940, 1073, 1360, 1447, 1646
BseJI	GATNNNNATC	1 cut(s)	904
BseLI	CCNNNNNNNGG	5 cut(s)	106, 430, 460, 971, 1351
BseMI	GCAATG	2 cut(s)	684, 1058
BseMII	CTCAG	4 cut(s)	352, 1071, 1089, 1426
BseNI	ACTGG	4 cut(s)	241, 519, 1410, 1511
BseRI	GAGGAG	1 cut(s)	1376
BseSI	GKGCMC	1 cut(s)	1030
BseXI	GCAGC	5 cut(s)	17, 20, 45, 346, 1222
BseYI	CCCAGC	1 cut(s)	1296
Bsh1236I	CGCG	2 cut(s)	148, 272
Bsh1285I	CGRYCG	1 cut(s)	170
BshFI	GGCC	6 cut(s)	240, 359, 453, 1315, 1552, 1637
BshNI	GGYRCC	1 cut(s)	195
BsiEI	CGRYCG	1 cut(s)	170
BsiHKAI	GWGCWC	1 cut(s)	1030
BsiSI	CCGG	4 cut(s)	166, 199, 1094, 1745
BslFI	GGGAC	1 cut(s)	448
BslI	CCNNNNNNNGG	5 cut(s)	106, 430, 460, 971, 1351
BsmAI	GTCTC	1 cut(s)	1706
BsmFI	GGGAC	1 cut(s)	448
BsnI	GGCC	6 cut(s)	240, 359, 453, 1315, 1552, 1637
Bsp1286I	GDGCHC	2 cut(s)	327, 1030
Bsp143I	GATC	9 cut(s)	247, 258, 751, 846, 905, 1408, 1415, 1444, 1542
Bsp1720I	GCTNAGC	1 cut(s)	1098
Bsp19I	CCATGG	1 cut(s)	998
BspACI	CCGC	5 cut(s)	188, 223, 270, 1400, 1767
BspANI	GGCC	6 cut(s)	240, 359, 453, 1315, 1552, 1637
BspCNI	CTCAG	4 cut(s)	351, 1072, 1090, 1425
BspFNI	CGCG	2 cut(s)	148, 272
BspHI	TCATGA	1 cut(s)	1533
BspLI	GGNNCC	6 cut(s)	197, 848, 963, 1092, 1731, 1749
BspMAI	CTGCAG	2 cut(s)	1240, 1558
BspMI	ACCTGC	1 cut(s)	1515
BspPI	GGATC	6 cut(s)	242, 759, 841, 854, 1416, 1439
BspQI	GCTCTTC	1 cut(s)	133
BspT107I	GGYRCC	1 cut(s)	195
BspTI	CTTAAG	1 cut(s)	1796
BsrDI	GCAATG	2 cut(s)	684, 1058
BsrI	ACTGG	4 cut(s)	241, 519, 1410, 1511
BssECI	CCNNGG	5 cut(s)	84, 424, 998, 1424, 1519
BssMI	GATC	9 cut(s)	247, 258, 751, 846, 905, 1408, 1415, 1444, 1542
BssSI	CACGAG	1 cut(s)	1546
BssT1I	CCWWGG	1 cut(s)	998
Bst2BI	CACGAG	1 cut(s)	1546
Bst2UI	CCWGG	3 cut(s)	1346, 1425, 1521
Bst4CI	ACNGT	7 cut(s)	205, 370, 425, 830, 896, 1051, 1793
Bst6I	CTCTTC	2 cut(s)	133, 1236
BstAFI	CTTAAG	1 cut(s)	1796
BstAPI	GCANNNNNTGC	1 cut(s)	695
BstC8I	GCNNGC	4 cut(s)	225, 1326, 1468, 1554
BstDEI	CTNAG	7 cut(s)	338, 989, 1031, 1080, 1098, 1391, 1412
BstDSI	CCRYGG	2 cut(s)	424, 998
BstF5I	GGATG	5 cut(s)	940, 1073, 1360, 1447, 1646
BstFNI	CGCG	2 cut(s)	148, 272
BstH2I	RGCGCY	1 cut(s)	79
BstHHI	GCGC	2 cut(s)	33, 78
BstKTI	GATC	9 cut(s)	250, 261, 754, 849, 908, 1411, 1418, 1447, 1545
BstMAI	GTCTC	1 cut(s)	1706
BstMBI	GATC	9 cut(s)	247, 258, 751, 846, 905, 1408, 1415, 1444, 1542
BstMCI	CGRYCG	1 cut(s)	170
BstMWI	GCNNNNNNNGC	5 cut(s)	331, 551, 695, 1321, 1463
BstNI	CCWGG	3 cut(s)	1346, 1425, 1521
BstSCI	CCNGG	3 cut(s)	1344, 1423, 1519
BstSFI	CTRYAG	3 cut(s)	912, 1236, 1554
BstSLI	GKGCMC	1 cut(s)	1030
BstUI	CGCG	2 cut(s)	148, 272
BstV1I	GCAGC	5 cut(s)	17, 20, 45, 346, 1222
BstV2I	GAAGAC	2 cut(s)	256, 1111
BstX2I	RGATCY	6 cut(s)	751, 846, 905, 1408, 1415, 1542
BstYI	RGATCY	6 cut(s)	751, 846, 905, 1408, 1415, 1542
BsuI	GTATCC	1 cut(s)	893
BsuRI	GGCC	6 cut(s)	240, 359, 453, 1315, 1552, 1637
BtgI	CCRYGG	2 cut(s)	424, 998
BtsCI	GGATG	5 cut(s)	940, 1073, 1360, 1447, 1646
BtsIMutI	CAGTG	3 cut(s)	366, 901, 1027
BveI	ACCTGC	1 cut(s)	1515
Cac8I	GCNNGC	4 cut(s)	225, 1326, 1468, 1554
CciI	TCATGA	1 cut(s)	1533
CfoI	GCGC	2 cut(s)	33, 78
Cfr13I	GGNCC	4 cut(s)	238, 357, 1202, 1776
CseI	GACGC	1 cut(s)	799
Csp6I	GTAC	6 cut(s)	586, 816, 1073, 1403, 1451, 1514
CviAII	CATG	9 cut(s)	625, 781, 971, 999, 1054, 1064, 1229, 1534, 1577
CviQI	GTAC	6 cut(s)	586, 816, 1073, 1403, 1451, 1514
DdeI	CTNAG	7 cut(s)	338, 989, 1031, 1080, 1098, 1391, 1412
DpnI	GATC	9 cut(s)	249, 260, 753, 848, 907, 1410, 1417, 1446, 1544
DpnII	GATC	9 cut(s)	247, 258, 751, 846, 905, 1408, 1415, 1444, 1542
EaeI	YGGCCR	2 cut(s)	1313, 1635
Eam1104I	CTCTTC	2 cut(s)	133, 1236
EarI	CTCTTC	2 cut(s)	133, 1236
Eco130I	CCWWGG	1 cut(s)	998
Eco147I	AGGCCT	1 cut(s)	453
Eco24I	GRGCYC	1 cut(s)	327
Eco32I	GATATC	1 cut(s)	995
Eco47I	GGWCC	2 cut(s)	1202, 1776
Eco47III	AGCGCT	1 cut(s)	77
EcoRII	CCWGG	3 cut(s)	1344, 1423, 1519
EcoRV	GATATC	1 cut(s)	995
EcoT14I	CCWWGG	1 cut(s)	998
EcoT38I	GRGCYC	1 cut(s)	327
ErhI	CCWWGG	1 cut(s)	998
FaeI	CATG	9 cut(s)	628, 784, 974, 1002, 1057, 1067, 1232, 1537, 1580
FalI	AAGNNNNNCTT	6 cut(s)	20, 52, 42, 74, 248, 280
FaqI	GGGAC	1 cut(s)	448
FatI	CATG	9 cut(s)	624, 780, 970, 998, 1053, 1063, 1228, 1533, 1576
FauI	CCCGC	3 cut(s)	181, 216, 1760
FblI	GTMKAC	1 cut(s)	1689
Fnu4HI	GCNGC	5 cut(s)	6, 9, 34, 335, 1236
FokI	GGATG	5 cut(s)	947, 1080, 1367, 1454, 1633
FriOI	GRGCYC	1 cut(s)	327
Fsp4HI	GCNGC	5 cut(s)	6, 9, 34, 335, 1236
FspBI	CTAG	2 cut(s)	113, 1620
GlaI	GCGC	2 cut(s)	32, 77
GluI	GCNGC	5 cut(s)	6, 9, 34, 335, 1236
GsaI	CCCAGC	1 cut(s)	1300
GsuI	CTGGAG	2 cut(s)	468, 510
HaeII	RGCGCY	1 cut(s)	79
HaeIII	GGCC	6 cut(s)	240, 359, 453, 1315, 1552, 1637
HapII	CCGG	4 cut(s)	166, 199, 1094, 1745
HgaI	GACGC	1 cut(s)	799
HhaI	GCGC	2 cut(s)	33, 78
Hin1II	CATG	9 cut(s)	628, 784, 974, 1002, 1057, 1067, 1232, 1537, 1580
Hin6I	GCGC	2 cut(s)	31, 76
HinP1I	GCGC	2 cut(s)	31, 76
HincII	GTYRAC	3 cut(s)	609, 1690, 1738
HindII	GTYRAC	3 cut(s)	609, 1690, 1738
HindIII	AAGCTT	1 cut(s)	873
HinfI	GANTC	5 cut(s)	675, 917, 1598, 1691, 1757
HpaII	CCGG	4 cut(s)	166, 199, 1094, 1745
HphI	GGTGA	3 cut(s)	100, 758, 1721
Hpy166II	GTNNAC	7 cut(s)	609, 1028, 1073, 1166, 1644, 1690, 1738
Hpy188I	TCNGA	9 cut(s)	85, 178, 247, 291, 880, 942, 1081, 1291, 1415
Hpy188III	TCNNGA	4 cut(s)	672, 1337, 1487, 1534
Hpy8I	GTNNAC	7 cut(s)	609, 1028, 1073, 1166, 1644, 1690, 1738
Hpy99I	CGWCG	1 cut(s)	571
HpyAV	CCTTC	4 cut(s)	337, 797, 861, 1139
HpyCH4III	ACNGT	7 cut(s)	205, 370, 425, 830, 896, 1051, 1793
HpyCH4IV	ACGT	2 cut(s)	611, 1640
HpyF10VI	GCNNNNNNNGC	5 cut(s)	331, 551, 695, 1321, 1463
HpyF3I	CTNAG	7 cut(s)	338, 989, 1031, 1080, 1098, 1391, 1412
HpySE526I	ACGT	2 cut(s)	611, 1640
Hsp92II	CATG	9 cut(s)	628, 784, 974, 1002, 1057, 1067, 1232, 1537, 1580
HspAI	GCGC	2 cut(s)	31, 76
Kzo9I	GATC	9 cut(s)	247, 258, 751, 846, 905, 1408, 1415, 1444, 1542
LguI	GCTCTTC	1 cut(s)	133
LmnI	GCTCC	5 cut(s)	398, 961, 1096, 1123, 1321
Lsp1109I	GCAGC	5 cut(s)	17, 20, 45, 346, 1222
LweI	GCATC	3 cut(s)	282, 925, 975
MaeI	CTAG	2 cut(s)	113, 1620
MaeII	ACGT	2 cut(s)	611, 1640
MaeIII	GTNAC	5 cut(s)	669, 977, 1139, 1428, 1758
MalI	GATC	9 cut(s)	249, 260, 753, 848, 907, 1410, 1417, 1446, 1544
MboI	GATC	9 cut(s)	247, 258, 751, 846, 905, 1408, 1415, 1444, 1542
MfeI	CAATTG	1 cut(s)	1625
MflI	RGATCY	6 cut(s)	751, 846, 905, 1408, 1415, 1542
MhlI	GDGCHC	2 cut(s)	327, 1030
MlsI	TGGCCA	1 cut(s)	1637
MluNI	TGGCCA	1 cut(s)	1637
MlyI	GAGTC	2 cut(s)	1685, 1766
MmeI	TCCRAC	1 cut(s)	1527
Mox20I	TGGCCA	1 cut(s)	1637
MroXI	GAANNNNTTC	1 cut(s)	1370
MscI	TGGCCA	1 cut(s)	1637
MseI	TTAA	4 cut(s)	231, 420, 1569, 1797
MslI	CAYNNNNRTG	2 cut(s)	371, 1068
Msp20I	TGGCCA	1 cut(s)	1637
MspCI	CTTAAG	1 cut(s)	1796
MspI	CCGG	4 cut(s)	166, 199, 1094, 1745
MspR9I	CCNGG	3 cut(s)	1346, 1425, 1521
MunI	CAATTG	1 cut(s)	1625
MvaI	CCWGG	3 cut(s)	1346, 1425, 1521
MvnI	CGCG	2 cut(s)	148, 272
MwoI	GCNNNNNNNGC	5 cut(s)	331, 551, 695, 1321, 1463
NcoI	CCATGG	1 cut(s)	998
NdeII	GATC	9 cut(s)	247, 258, 751, 846, 905, 1408, 1415, 1444, 1542
NlaIII	CATG	9 cut(s)	628, 784, 974, 1002, 1057, 1067, 1232, 1537, 1580
NlaIV	GGNNCC	6 cut(s)	197, 848, 963, 1092, 1731, 1749
NmeAIII	GCCGAG	1 cut(s)	199
NmuCI	GTSAC	3 cut(s)	669, 1428, 1758
OliI	CACNNNNGTG	1 cut(s)	371
PagI	TCATGA	1 cut(s)	1533
PceI	AGGCCT	1 cut(s)	453
PciSI	GCTCTTC	1 cut(s)	133
PdmI	GAANNNNTTC	1 cut(s)	1370
PfeI	GAWTC	3 cut(s)	675, 917, 1598
PflFI	GACNNNGTC	1 cut(s)	439
PflMI	CCANNNNNTGG	1 cut(s)	971
PfoI	TCCNGGA	1 cut(s)	1344
PkrI	GCNGC	5 cut(s)	7, 10, 35, 336, 1237
PleI	GAGTC	2 cut(s)	1685, 1765
PpsI	GAGTC	2 cut(s)	1685, 1765
Psp6I	CCWGG	3 cut(s)	1344, 1423, 1519
PspFI	CCCAGC	1 cut(s)	1296
PspGI	CCWGG	3 cut(s)	1344, 1423, 1519
PspN4I	GGNNCC	6 cut(s)	197, 848, 963, 1092, 1731, 1749
PspPI	GGNCC	4 cut(s)	238, 357, 1202, 1776
PstI	CTGCAG	2 cut(s)	1240, 1558
PsuI	RGATCY	6 cut(s)	751, 846, 905, 1408, 1415, 1542
PsyI	GACNNNGTC	1 cut(s)	439
RsaI	GTAC	6 cut(s)	587, 817, 1074, 1404, 1452, 1515
RsaNI	GTAC	6 cut(s)	586, 816, 1073, 1403, 1451, 1514
RseI	CAYNNNNRTG	2 cut(s)	371, 1068
SalI	GTCGAC	1 cut(s)	1688
SapI	GCTCTTC	1 cut(s)	133
SaqAI	TTAA	4 cut(s)	231, 420, 1569, 1797
SatI	GCNGC	5 cut(s)	6, 9, 34, 335, 1236
Sau3AI	GATC	9 cut(s)	247, 258, 751, 846, 905, 1408, 1415, 1444, 1542
Sau96I	GGNCC	4 cut(s)	238, 357, 1202, 1776
SbfI	CCTGCAGG	1 cut(s)	1558
ScaI	AGTACT	1 cut(s)	817
SchI	GAGTC	2 cut(s)	1685, 1766
ScrFI	CCNGG	3 cut(s)	1346, 1425, 1521
SdaI	CCTGCAGG	1 cut(s)	1558
SduI	GDGCHC	2 cut(s)	327, 1030
SfaNI	GCATC	3 cut(s)	282, 925, 975
SfcI	CTRYAG	3 cut(s)	912, 1236, 1554
SinI	GGWCC	2 cut(s)	1202, 1776
SmiMI	CAYNNNNRTG	2 cut(s)	371, 1068
SmlI	CTYRAG	1 cut(s)	1796
SmoI	CTYRAG	1 cut(s)	1796
Sse8387I	CCTGCAGG	1 cut(s)	1558
SseBI	AGGCCT	1 cut(s)	453
SsiI	CCGC	5 cut(s)	188, 223, 270, 1400, 1767
SspMI	CTAG	2 cut(s)	113, 1620
StuI	AGGCCT	1 cut(s)	453
StyD4I	CCNGG	3 cut(s)	1344, 1423, 1519
StyI	CCWWGG	1 cut(s)	998
TaaI	ACNGT	7 cut(s)	205, 370, 425, 830, 896, 1051, 1793
TaiI	ACGT	2 cut(s)	614, 1643
TaqI	TCGA	4 cut(s)	105, 343, 1689, 1788
TatI	WGTACW	2 cut(s)	815, 1072
TfiI	GAWTC	3 cut(s)	675, 917, 1598
Tru1I	TTAA	4 cut(s)	231, 420, 1569, 1797
Tru9I	TTAA	4 cut(s)	231, 420, 1569, 1797
TscAI	CASTG	3 cut(s)	373, 901, 1027
TseFI	GTSAC	3 cut(s)	669, 1428, 1758
TseI	GCWGC	5 cut(s)	5, 8, 33, 334, 1235
Tsp45I	GTSAC	3 cut(s)	669, 1428, 1758
TspDTI	ATGAA	6 cut(s)	587, 610, 769, 1236, 1522, 1550
TspGWI	ACGGA	1 cut(s)	603
TspRI	CASTG	3 cut(s)	373, 901, 1027
Tth111I	GACNNNGTC	1 cut(s)	439
Van91I	CCANNNNNTGG	1 cut(s)	971
Vha464I	CTTAAG	1 cut(s)	1796
VneI	GTGCAC	1 cut(s)	1026
VpaK11BI	GGWCC	2 cut(s)	1202, 1776
XapI	RAATTY	7 cut(s)	386, 650, 775, 858, 1332, 1370, 1661
XmiI	GTMKAC	1 cut(s)	1689
XmnI	GAANNNNTTC	1 cut(s)	1370
XspI	CTAG	2 cut(s)	113, 1620
ZrmI	AGTACT	1 cut(s)	817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.