Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0014025

Physical Location & Seq

Genomic Coordinates Reverse (-)

607506 .. 608787

Gene Structure 1282 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1011000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1122 bp

ATGGCTGAAACTCCATCCCAGACGCCGCGATCTGCGTCAGAGGCCGAGACGGAGACTATGGAGTACTGGTGCTACCACTGCAACAAACGCGTCTCCATTGAAACCGTGGCGAATCTCCCGGATATCGTCTGCCACGAGTGCAAGAACGGTTTCGTCGAATCGATCCGGGCCGCGTCGTATCCGCAGTCGGATCCTCCTTCCCGATCGTCTGATCAGGTCGACGACCCGACTCTAGGCTCACCATTTCTCCAGGTGCTGCGGCTAATCGCTCAGGCGTCGCGTGAGGAGGATGCGCCCCTGTCGCTGCCTCAAAACCCCATGCCTGATGACGATTTCTTCAGGATTGAGATGGACGGGTGGGACAACGACGAGGACGATGACGAGGACGAGGACGACGATGAGCACAGTGTCGAGTTTCGCAACCACGACGGCGAGGGTAACGAAGAAGCCGGACAGGAAGTAGAGGAGGAGGAGGAAGAGGAAGATGATAGATCGGATAACGAGGATGAAGGCGAAGAGAACCAGGAAGATGAGCAAGAGAGAGATGAAGAAGACATGCGACGACGTCGTCGCGACGTGCTTCGTCTCCGCATCCGAGAGATTGCGACCCGAGCGAGCAGCGGGAGGAACCGGATTCTGGATTGGGCCGAGATCTTGATGGGGCTGGAGGACAACTCGATCGAATTCCGGCTCGAAATGCCCGAATCGGACCGGTACATCGGCAATCCCGAGGATTACGTAGATGCAGCCGGCTATGAGGCTTTGTTGCAGACCTTGGCTGAGAGCGATAATGCTGGAAGGAGAGGGTCTCCACCGGCGTCGAAGAATGCCGTCTCGGAGTTACCGTCGGTCAAGATTGCCTCAGAGGATGAGGCCGTGGTGTGCGCCATATGCAAGGATATGGTGAATGTTGGTGAAATGTCGAAGAAGCTGCCATGTGGGCATGGTTACCATGGCGATTGCATTGTTCCTTGGCTGAGTTCCAGGAATACTTGCCCGGTTTGCCGGTTTGAGCTGCCAACCGATGATCCAGAATACGAGGAGGAGAGGAAGAAGCGAGCTGTGACTGTTAGTGCCGCTGGAGCTTCCAGTTCTGGCGGAGATAATTCAATCTCTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2 zinc_ribbon_9

Protein Analysis

374

Amino Acids

41.96

Weight (kDa)

4.24

Isoelectric Point (pI)

72.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_19	PF14369	22 - 55	4.5e-10	zinc-ribbon
zf-RING_2	PF13639	295 - 336	2.1e-12	Ring finger domain
zf-C3HC4_2	PF13923	295 - 335	1.8e-10	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	295 - 322	1.1e-07	RING-like zinc finger
zf-C3HC4	PF00097	295 - 335	1.3e-07	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	311 - 336	4.4e-07	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64920
fragaria_vesca	FvH4_2g38280
malus_domestica	MD08G1011000.v1.1 MD15G1011000.v1.1
prunus_persica	Prupe.1G363700_v2.0.a1
pyrus_communis	pycom15g00940
rosa_chinensis	RchiOBHm_Chr6g0303101
rosa_laevigata	RLG00000011108
rosa_multiflora	Rmu_sc0003721.1_g000001 Rmu_sc0008911.1_g000004
rosa_roxburghii	Rroxscaffold_7G00165020
rosa_rugosa	Rorug06G0319200
rosa_samantha	Rh6AG433000 Rh6BG469700 Rh6CG445300 Rh6DG432100
rosa_wichuraiana	Rw6G037530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	567
AatII	GACGTC	1 cut(s)	568
AccI	GTMKAC	1 cut(s)	219
AccII	CGCG	5 cut(s)	28, 90, 173, 280, 573
AciI	CCGC	8 cut(s)	26, 171, 182, 259, 589, 621, 1077, 1098
AclWI	GGATC	4 cut(s)	157, 185, 198, 1022
AcsI	RAATTY	1 cut(s)	683
AcuI	CTGAAG	1 cut(s)	322
AcyI	GRCGYC	4 cut(s)	23, 275, 565, 818
AfaI	GTAC	2 cut(s)	65, 716
AfiI	CCNNNNNNNGG	2 cut(s)	233, 637
AflIII	ACRYGT	1 cut(s)	88
AgeI	ACCGGT	1 cut(s)	711
AgsI	TTSAA	2 cut(s)	101, 1110
AjiI	CACGTC	1 cut(s)	577
AjnI	CCWGG	3 cut(s)	249, 522, 983
AluBI	AGCT	4 cut(s)	931, 1015, 1061, 1085
AluI	AGCT	4 cut(s)	931, 1015, 1061, 1085
Alw21I	GWGCWC	1 cut(s)	405
Alw26I	GTCTC	6 cut(s)	41, 47, 97, 590, 813, 838
AlwI	GGATC	4 cut(s)	157, 185, 198, 1022
AlwNI	CAGNNNCTG	1 cut(s)	256
Ama87I	CYCGRG	2 cut(s)	609, 728
AoxI	GGCC	4 cut(s)	42, 168, 645, 873
ApeKI	GCWGC	6 cut(s)	256, 304, 618, 746, 931, 1015
ApoI	RAATTY	1 cut(s)	683
AsiGI	ACCGGT	1 cut(s)	711
Asp700I	GAANNNNTTC	1 cut(s)	149
AspLEI	GCGC	2 cut(s)	295, 887
AspS9I	GGNCC	3 cut(s)	168, 645, 709
AsuC2I	CCSGG	3 cut(s)	119, 167, 998
AsuHPI	GGTGA	3 cut(s)	231, 916, 926
AvaI	CYCGRG	2 cut(s)	609, 728
AvaII	GGWCC	1 cut(s)	709
BamHI	GGATCC	1 cut(s)	190
BauI	CACGAG	1 cut(s)	134
BbsI	GAAGAC	1 cut(s)	558
Bbv12I	GWGCWC	1 cut(s)	405
BbvI	GCAGC	6 cut(s)	243, 291, 630, 758, 918, 1002
BccI	CCATC	3 cut(s)	22, 343, 652
BceAI	ACGGC	3 cut(s)	445, 815, 860
BcgI	CGANNNNNNTGC	2 cut(s)	913, 947
BciT130I	CCWGG	3 cut(s)	251, 524, 985
BciVI	GTATCC	1 cut(s)	189
BclI	TGATCA	1 cut(s)	211
BcnI	CCSGG	3 cut(s)	119, 167, 998
BcoDI	GTCTC	6 cut(s)	41, 47, 97, 590, 813, 838
BfaI	CTAG	1 cut(s)	233
BfuI	GTATCC	1 cut(s)	189
BglI	GCCNNNNNGGC	1 cut(s)	940
BglII	AGATCT	1 cut(s)	651
BmcAI	AGTACT	1 cut(s)	65
Bme1390I	CCNGG	6 cut(s)	119, 167, 251, 524, 985, 998
Bme18I	GGWCC	1 cut(s)	709
BmeT110I	CYCGRG	2 cut(s)	609, 728
BmgBI	CACGTC	1 cut(s)	577
BmgT120I	GGNCC	3 cut(s)	168, 645, 709
BmiI	GGNNCC	2 cut(s)	192, 629
BmrFI	CCNGG	6 cut(s)	119, 167, 251, 524, 985, 998
BmsI	GCATC	3 cut(s)	280, 600, 733
BpiI	GAAGAC	1 cut(s)	558
BplI	GAGNNNNNCTC	4 cut(s)	659, 691, 793, 825
BpmI	CTGGAG	3 cut(s)	233, 686, 1101
Bpu10I	CCTNAGC	1 cut(s)	270
BpuMI	CCSGG	3 cut(s)	119, 167, 998
Bsa29I	ATCGAT	1 cut(s)	161
BsaAI	YACGTR	1 cut(s)	739
BsaHI	GRCGYC	4 cut(s)	23, 275, 565, 818
BsaI	GGTCTC	1 cut(s)	813
BsaJI	CCNNGG	6 cut(s)	105, 729, 774, 876, 952, 971
BsaWI	WCCGGW	2 cut(s)	630, 711
BsaXI	ACNNNNNCTCC	6 cut(s)	53, 83, 231, 261, 830, 860
Bsc4I	CCNNNNNNNGG	2 cut(s)	233, 637
Bse118I	RCCGGY	4 cut(s)	711, 749, 814, 1005
Bse1I	ACTGG	2 cut(s)	71, 1089
BseBI	CCWGG	3 cut(s)	251, 524, 985
BseCI	ATCGAT	1 cut(s)	161
BseDI	CCNNGG	6 cut(s)	105, 729, 774, 876, 952, 971
BseGI	GGATG	5 cut(s)	14, 295, 511, 591, 874
BseLI	CCNNNNNNNGG	2 cut(s)	233, 637
BseMII	CTCAG	4 cut(s)	284, 771, 876, 968
BseNI	ACTGG	2 cut(s)	71, 1089
BseRI	GAGGAG	6 cut(s)	299, 479, 482, 485, 1055, 1058
BseXI	GCAGC	6 cut(s)	243, 291, 630, 758, 918, 1002
Bsh1236I	CGCG	5 cut(s)	28, 90, 173, 280, 573
Bsh1285I	CGRYCG	2 cut(s)	206, 681
BshFI	GGCC	4 cut(s)	44, 170, 647, 875
BshTI	ACCGGT	1 cut(s)	711
BshVI	ATCGAT	1 cut(s)	161
BsiEI	CGRYCG	2 cut(s)	206, 681
BsiHKAI	GWGCWC	1 cut(s)	405
BsiHKCI	CYCGRG	2 cut(s)	609, 728
BslFI	GGGAC	1 cut(s)	374
BslI	CCNNNNNNNGG	2 cut(s)	233, 637
BsmAI	GTCTC	6 cut(s)	41, 47, 97, 590, 813, 838
BsmBI	CGTCTC	4 cut(s)	41, 97, 590, 838
BsmFI	GGGAC	1 cut(s)	374
BsmI	GAATGC	1 cut(s)	832
BsnI	GGCC	4 cut(s)	44, 170, 647, 875
Bso31I	GGTCTC	1 cut(s)	813
BsoBI	CYCGRG	2 cut(s)	609, 728
Bsp1286I	GDGCHC	1 cut(s)	405
Bsp143I	GATC	9 cut(s)	29, 162, 190, 203, 211, 491, 651, 678, 1027
Bsp19I	CCATGG	1 cut(s)	952
Bsp68I	TCGCGA	1 cut(s)	573
BspACI	CCGC	8 cut(s)	26, 171, 182, 259, 589, 621, 1077, 1098
BspANI	GGCC	4 cut(s)	44, 170, 647, 875
BspCNI	CTCAG	4 cut(s)	283, 772, 875, 969
BspDI	ATCGAT	1 cut(s)	161
BspFNI	CGCG	5 cut(s)	28, 90, 173, 280, 573
BspLI	GGNNCC	2 cut(s)	192, 629
BspPI	GGATC	4 cut(s)	157, 185, 198, 1022
BspTNI	GGTCTC	1 cut(s)	813
BsrFI	RCCGGY	4 cut(s)	711, 749, 814, 1005
BsrI	ACTGG	2 cut(s)	71, 1089
BssAI	RCCGGY	4 cut(s)	711, 749, 814, 1005
BssECI	CCNNGG	6 cut(s)	105, 729, 774, 876, 952, 971
BssMI	GATC	9 cut(s)	29, 162, 190, 203, 211, 491, 651, 678, 1027
BssNI	GRCGYC	4 cut(s)	23, 275, 565, 818
BssSI	CACGAG	1 cut(s)	134
BssT1I	CCWWGG	3 cut(s)	774, 952, 971
Bst2BI	CACGAG	1 cut(s)	134
Bst2UI	CCWGG	3 cut(s)	251, 524, 985
Bst4CI	ACNGT	5 cut(s)	106, 149, 407, 846, 1069
Bst6I	CTCTTC	2 cut(s)	471, 510
BstACI	GRCGYC	4 cut(s)	23, 275, 565, 818
BstBAI	YACGTR	1 cut(s)	739
BstC8I	GCNNGC	3 cut(s)	616, 751, 1059
BstDEI	CTNAG	4 cut(s)	270, 780, 862, 977
BstDSI	CCRYGG	3 cut(s)	105, 876, 952
BstEII	GGTNACC	1 cut(s)	947
BstF5I	GGATG	5 cut(s)	14, 295, 511, 591, 874
BstFNI	CGCG	5 cut(s)	28, 90, 173, 280, 573
BstHHI	GCGC	2 cut(s)	295, 887
BstKTI	GATC	9 cut(s)	32, 165, 193, 206, 214, 494, 654, 681, 1030
BstMAI	GTCTC	6 cut(s)	41, 47, 97, 590, 813, 838
BstMBI	GATC	9 cut(s)	29, 162, 190, 203, 211, 491, 651, 678, 1027
BstMCI	CGRYCG	2 cut(s)	206, 681
BstNI	CCWGG	3 cut(s)	251, 524, 985
BstNSI	RCATGY	1 cut(s)	559
BstPI	GGTNACC	1 cut(s)	947
BstSCI	CCNGG	6 cut(s)	117, 165, 249, 522, 983, 996
BstSNI	TACGTA	1 cut(s)	739
BstUI	CGCG	5 cut(s)	28, 90, 173, 280, 573
BstV1I	GCAGC	6 cut(s)	243, 291, 630, 758, 918, 1002
BstV2I	GAAGAC	1 cut(s)	558
BstX2I	RGATCY	2 cut(s)	190, 651
BstYI	RGATCY	2 cut(s)	190, 651
Bsu15I	ATCGAT	1 cut(s)	161
BsuI	GTATCC	1 cut(s)	189
BsuRI	GGCC	4 cut(s)	44, 170, 647, 875
BsuTUI	ATCGAT	1 cut(s)	161
BtgI	CCRYGG	3 cut(s)	105, 876, 952
BtrI	CACGTC	1 cut(s)	577
BtsCI	GGATG	5 cut(s)	14, 295, 511, 591, 874
BtsI	GCAGTG	1 cut(s)	76
BtsIMutI	CAGTG	2 cut(s)	76, 412
BtuMI	TCGCGA	1 cut(s)	573
Cac8I	GCNNGC	3 cut(s)	616, 751, 1059
CaiI	CAGNNNCTG	1 cut(s)	256
CfoI	GCGC	2 cut(s)	295, 887
Cfr10I	RCCGGY	4 cut(s)	711, 749, 814, 1005
Cfr13I	GGNCC	3 cut(s)	168, 645, 709
ClaI	ATCGAT	1 cut(s)	161
CpoI	CGGWCCG	1 cut(s)	709
CseI	GACGC	6 cut(s)	24, 31, 79, 162, 264, 807
Csp6I	GTAC	2 cut(s)	64, 715
CspAI	ACCGGT	1 cut(s)	711
CspI	CGGWCCG	1 cut(s)	709
CviAII	CATG	5 cut(s)	319, 556, 936, 944, 953
CviQI	GTAC	2 cut(s)	64, 715
DdeI	CTNAG	4 cut(s)	270, 780, 862, 977
DpnI	GATC	9 cut(s)	31, 164, 192, 205, 213, 493, 653, 680, 1029
DpnII	GATC	9 cut(s)	29, 162, 190, 203, 211, 491, 651, 678, 1027
DrdI	GACNNNNNNGTC	1 cut(s)	567
DseDI	GACNNNNNNGTC	1 cut(s)	567
Eam1104I	CTCTTC	2 cut(s)	471, 510
EarI	CTCTTC	2 cut(s)	471, 510
EciI	GGCGGA	1 cut(s)	1113
Eco105I	TACGTA	1 cut(s)	739
Eco130I	CCWWGG	3 cut(s)	774, 952, 971
Eco31I	GGTCTC	1 cut(s)	813
Eco32I	GATATC	1 cut(s)	124
Eco47I	GGWCC	1 cut(s)	709
Eco57I	CTGAAG	1 cut(s)	322
Eco88I	CYCGRG	2 cut(s)	609, 728
Eco91I	GGTNACC	1 cut(s)	947
EcoO65I	GGTNACC	1 cut(s)	947
EcoRI	GAATTC	1 cut(s)	683
EcoRII	CCWGG	3 cut(s)	249, 522, 983
EcoRV	GATATC	1 cut(s)	124
EcoT14I	CCWWGG	3 cut(s)	774, 952, 971
ErhI	CCWWGG	3 cut(s)	774, 952, 971
Esp3I	CGTCTC	4 cut(s)	41, 97, 590, 838
FaeI	CATG	5 cut(s)	322, 559, 939, 947, 956
FaqI	GGGAC	1 cut(s)	374
FatI	CATG	5 cut(s)	318, 555, 935, 943, 952
FauI	CCCGC	1 cut(s)	614
FauNDI	CATATG	1 cut(s)	890
FbaI	TGATCA	1 cut(s)	211
FblI	GTMKAC	1 cut(s)	219
FokI	GGATG	4 cut(s)	302, 518, 578, 881
FspBI	CTAG	1 cut(s)	233
GlaI	GCGC	2 cut(s)	294, 886
GsuI	CTGGAG	3 cut(s)	233, 686, 1101
HaeIII	GGCC	4 cut(s)	44, 170, 647, 875
HgaI	GACGC	6 cut(s)	24, 31, 79, 162, 264, 807
HhaI	GCGC	2 cut(s)	295, 887
Hin1I	GRCGYC	4 cut(s)	23, 275, 565, 818
Hin1II	CATG	5 cut(s)	322, 559, 939, 947, 956
Hin6I	GCGC	2 cut(s)	293, 885
HinP1I	GCGC	2 cut(s)	293, 885
HincII	GTYRAC	1 cut(s)	220
HindII	GTYRAC	1 cut(s)	220
HinfI	GANTC	5 cut(s)	112, 158, 229, 634, 704
HphI	GGTGA	3 cut(s)	231, 916, 926
Hpy166II	GTNNAC	1 cut(s)	220
Hpy188I	TCNGA	8 cut(s)	40, 190, 211, 496, 596, 709, 838, 865
Hpy188III	TCNNGA	8 cut(s)	201, 340, 572, 638, 655, 728, 853, 1031
Hpy8I	GTNNAC	1 cut(s)	220
HpyAV	CCTTC	3 cut(s)	207, 503, 792
HpyCH4III	ACNGT	5 cut(s)	106, 149, 407, 846, 1069
HpyCH4IV	ACGT	3 cut(s)	565, 576, 738
HpyCH4V	TGCA	6 cut(s)	81, 141, 746, 769, 894, 963
HpyF3I	CTNAG	4 cut(s)	270, 780, 862, 977
HpySE526I	ACGT	3 cut(s)	565, 576, 738
Hsp92I	GRCGYC	4 cut(s)	23, 275, 565, 818
Hsp92II	CATG	5 cut(s)	322, 559, 939, 947, 956
HspAI	GCGC	2 cut(s)	293, 885
KroI	GCCGGC	1 cut(s)	749
KroNI	GCCGGC	1 cut(s)	751
Ksp22I	TGATCA	1 cut(s)	211
Kzo9I	GATC	9 cut(s)	29, 162, 190, 203, 211, 491, 651, 678, 1027
LmnI	GCTCC	1 cut(s)	1082
Lsp1109I	GCAGC	6 cut(s)	243, 291, 630, 758, 918, 1002
LweI	GCATC	3 cut(s)	280, 600, 733
MaeI	CTAG	1 cut(s)	233
MaeII	ACGT	3 cut(s)	565, 576, 738
MaeIII	GTNAC	4 cut(s)	437, 840, 947, 1063
MalI	GATC	9 cut(s)	31, 164, 192, 205, 213, 493, 653, 680, 1029
MboI	GATC	9 cut(s)	29, 162, 190, 203, 211, 491, 651, 678, 1027
MflI	RGATCY	2 cut(s)	190, 651
MhlI	GDGCHC	1 cut(s)	405
MluCI	AATT	2 cut(s)	683, 1105
MluI	ACGCGT	1 cut(s)	88
MlyI	GAGTC	1 cut(s)	223
MmeI	TCCRAC	1 cut(s)	168
MroNI	GCCGGC	1 cut(s)	749
MroXI	GAANNNNTTC	1 cut(s)	149
MspA1I	CMGCKG	2 cut(s)	621, 1079
MspR9I	CCNGG	6 cut(s)	119, 167, 251, 524, 985, 998
Mva1269I	GAATGC	1 cut(s)	832
MvaI	CCWGG	3 cut(s)	251, 524, 985
MvnI	CGCG	5 cut(s)	28, 90, 173, 280, 573
NaeI	GCCGGC	1 cut(s)	751
NciI	CCSGG	3 cut(s)	119, 167, 998
NcoI	CCATGG	1 cut(s)	952
NdeI	CATATG	1 cut(s)	890
NdeII	GATC	9 cut(s)	29, 162, 190, 203, 211, 491, 651, 678, 1027
NgoMIV	GCCGGC	1 cut(s)	749
NlaIII	CATG	5 cut(s)	322, 559, 939, 947, 956
NlaIV	GGNNCC	2 cut(s)	192, 629
NmeAIII	GCCGAG	2 cut(s)	70, 673
NmuCI	GTSAC	1 cut(s)	1063
NruI	TCGCGA	1 cut(s)	573
NspI	RCATGY	1 cut(s)	559
PcsI	WCGNNNNNNNCGW	7 cut(s)	132, 153, 372, 393, 699, 726, 842
PctI	GAATGC	1 cut(s)	832
PdiI	GCCGGC	1 cut(s)	751
PdmI	GAANNNNTTC	1 cut(s)	149
PfeI	GAWTC	4 cut(s)	112, 158, 634, 704
PflFI	GACNNNGTC	2 cut(s)	564, 567
PfoI	TCCNGGA	2 cut(s)	117, 983
PinAI	ACCGGT	1 cut(s)	711
Ple19I	CGATCG	2 cut(s)	206, 681
PleI	GAGTC	1 cut(s)	223
PpsI	GAGTC	1 cut(s)	223
Ppu21I	YACGTR	1 cut(s)	739
Psp6I	CCWGG	3 cut(s)	249, 522, 983
PspEI	GGTNACC	1 cut(s)	947
PspGI	CCWGG	3 cut(s)	249, 522, 983
PspN4I	GGNNCC	2 cut(s)	192, 629
PspPI	GGNCC	3 cut(s)	168, 645, 709
PstNI	CAGNNNCTG	1 cut(s)	256
PsuI	RGATCY	2 cut(s)	190, 651
PsyI	GACNNNGTC	2 cut(s)	564, 567
PvuI	CGATCG	2 cut(s)	206, 681
RruI	TCGCGA	1 cut(s)	573
RsaI	GTAC	2 cut(s)	65, 716
RsaNI	GTAC	2 cut(s)	64, 715
Rsr2I	CGGWCCG	1 cut(s)	709
RsrII	CGGWCCG	1 cut(s)	709
SalI	GTCGAC	1 cut(s)	218
Sau3AI	GATC	9 cut(s)	29, 162, 190, 203, 211, 491, 651, 678, 1027
Sau96I	GGNCC	3 cut(s)	168, 645, 709
ScaI	AGTACT	1 cut(s)	65
SchI	GAGTC	1 cut(s)	223
ScrFI	CCNGG	6 cut(s)	119, 167, 251, 524, 985, 998
SduI	GDGCHC	1 cut(s)	405
SfaNI	GCATC	3 cut(s)	280, 600, 733
SgrAI	CRCCGGYG	1 cut(s)	814
SinI	GGWCC	1 cut(s)	709
SnaBI	TACGTA	1 cut(s)	739
Sse9I	AATT	2 cut(s)	683, 1105
SsiI	CCGC	8 cut(s)	26, 171, 182, 259, 589, 621, 1077, 1098
SspMI	CTAG	1 cut(s)	233
StyD4I	CCNGG	6 cut(s)	117, 165, 249, 522, 983, 996
StyI	CCWWGG	3 cut(s)	774, 952, 971
TaaI	ACNGT	5 cut(s)	106, 149, 407, 846, 1069
TaiI	ACGT	3 cut(s)	568, 579, 741
TaqI	TCGA	9 cut(s)	156, 161, 219, 411, 677, 681, 693, 821, 923
TaqII	GACCGA	1 cut(s)	838
TasI	AATT	2 cut(s)	683, 1105
TatI	WGTACW	1 cut(s)	63
TauI	GCSGC	4 cut(s)	28, 173, 262, 1079
TfiI	GAWTC	4 cut(s)	112, 158, 634, 704
TscAI	CASTG	2 cut(s)	83, 412
TseFI	GTSAC	1 cut(s)	1063
TseI	GCWGC	6 cut(s)	256, 304, 618, 746, 931, 1015
Tsp45I	GTSAC	1 cut(s)	1063
TspDTI	ATGAA	2 cut(s)	522, 561
TspGWI	ACGGA	1 cut(s)	65
TspRI	CASTG	2 cut(s)	83, 412
Tth111I	GACNNNGTC	2 cut(s)	564, 567
VpaK11BI	GGWCC	1 cut(s)	709
XapI	RAATTY	1 cut(s)	683
XceI	RCATGY	1 cut(s)	559
XcmI	CCANNNNNNNNNTGG	1 cut(s)	103
XmiI	GTMKAC	1 cut(s)	219
XmnI	GAANNNNTTC	1 cut(s)	149
XspI	CTAG	1 cut(s)	233
ZraI	GACGTC	1 cut(s)	566
ZrmI	AGTACT	1 cut(s)	65

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.