Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0014025

Physical Location & Seq

Genomic Coordinates Reverse (-)

510352 .. 511470

Gene Structure 1119 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g00940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGGCTGAAACTCCATCCCAGACGCCGCCGACGCCGCGATCTGCGTCAGAGGCCGAGACGGAGACTATGGAGTACTGGTGCTACCACTGCAACAAACGCGTCTCCATTGAAACCGTGGCGAATCTCCCGGATATCGTCTGCCACGAGTGCAAGAACGGTTTCGTCGAATCCATCCCGGCCGCCTCGTATCCGCAGTGGGATCCTCCTTCCCGATCGTCCGATCAGGTCGACGACCCGACTCTAGGCTCTCCATTTCTCCAGGTGCTGCGGCTAATCGCTCAGGCGTCGCGTGAGGAGGATGCGCCCCCGTCGCTGCCTCAAAACCCCTTGCCTGATGACGATTTCTTCAGGATTGAGATGGACGGGTGGGACAACGACGAGGACGAGGACGAAGATGAGCACAGTGTCGAGTTTCGCAACCACGACGGCGAGGGTAACGAAGAAGCCGGACAGGAAGTAGAGGAGGAGGAGGAAGAGGAAGAAGATAGATCGGATAACGAGGATGGAGACGAAGAGAACCAGGAAGATTTGCAAGAGAGAGACGAAGAAGACATGCGACGACGTCGTCGCGACGTGCTTCGTCTCCGCATCCGAGACATTGCGACCCAAGCGAGCAGCGGGAGGAACCGGATTCTAGATTGGGCCGAGATCTTGATGGGGCTGGAGGACAAATCGATCGAATTCCGGCTCGAAATGCCCGAATCGGACCGGTACATCGGCAATCCTGAGGATTACGTGGATGCAGCCGGCTATGAGGCTTTGCTGCAGACCTTGGCTGAGAGCGATAATGCTGGAAGGAGAGGGGCTCCACCGGCGTCGAAGAATGCTGTTTCGGAGTTACCGTCGGCCAAGATTGCCTCAGAGGATGAGGCCGTGGTGTGCGCCATATGCAAGGATATGGTGAATGTTGGTGAAATGTCGAAGAAGCTGCCATGTGGGCATGGTTACCATGGCGATTGCATTGTTCCTTGGCTGAGTTCCAGGAATACTTGCCCGGTTTGCCGGTTTGAGCTGCCAACTGATGATCCAGAATACGAGGAGGAGAGGAAGAAGCGAGCTGTGACTGTTAGTGCCGCTGGAGCTTCCAGTTCTGGCGGAGATAATTCAATCTCTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_2 zf-RING_2 zinc_ribbon_9

Protein Analysis

373

Amino Acids

41.72

Weight (kDa)

4.28

Isoelectric Point (pI)

72.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_19	PF14369	25 - 58	4.5e-10	zinc-ribbon
zf-RING_2	PF13639	294 - 335	2.1e-12	Ring finger domain
zf-C3HC4_2	PF13923	294 - 334	1.8e-10	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	294 - 321	1.1e-07	RING-like zinc finger
zf-C3HC4	PF00097	294 - 334	1.3e-07	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	308 - 335	3.9e-07	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64920
fragaria_vesca	FvH4_2g38280
malus_domestica	MD08G1011000.v1.1 MD15G1011000.v1.1
prunus_persica	Prupe.1G363700_v2.0.a1
pyrus_communis	pycom15g00940
rosa_chinensis	RchiOBHm_Chr6g0303101
rosa_laevigata	RLG00000011108
rosa_multiflora	Rmu_sc0003721.1_g000001 Rmu_sc0008911.1_g000004
rosa_roxburghii	Rroxscaffold_7G00165020
rosa_rugosa	Rorug06G0319200
rosa_samantha	Rh6AG433000 Rh6BG469700 Rh6CG445300 Rh6DG432100
rosa_wichuraiana	Rw6G037530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	564
AatII	GACGTC	1 cut(s)	565
AccI	GTMKAC	1 cut(s)	228
AccII	CGCG	4 cut(s)	37, 99, 289, 570
AciI	CCGC	9 cut(s)	26, 35, 180, 191, 268, 586, 618, 1074, 1095
AclWI	GGATC	3 cut(s)	194, 207, 1019
AcoI	YGGCCR	2 cut(s)	177, 846
AcsI	RAATTY	1 cut(s)	680
AcuI	CTGAAG	1 cut(s)	331
AcyI	GRCGYC	5 cut(s)	23, 32, 284, 562, 815
AfaI	GTAC	2 cut(s)	74, 713
AfiI	CCNNNNNNNGG	1 cut(s)	242
AflIII	ACRYGT	1 cut(s)	97
AgeI	ACCGGT	1 cut(s)	708
AgsI	TTSAA	2 cut(s)	110, 1107
AjiI	CACGTC	1 cut(s)	574
AjnI	CCWGG	3 cut(s)	258, 519, 980
AluBI	AGCT	4 cut(s)	928, 1012, 1058, 1082
AluI	AGCT	4 cut(s)	928, 1012, 1058, 1082
Alw21I	GWGCWC	1 cut(s)	402
Alw26I	GTCTC	7 cut(s)	50, 56, 106, 501, 534, 587, 588
AlwI	GGATC	3 cut(s)	194, 207, 1019
AlwNI	CAGNNNCTG	1 cut(s)	265
AoxI	GGCC	5 cut(s)	51, 177, 642, 846, 870
ApeKI	GCWGC	7 cut(s)	265, 313, 615, 743, 763, 928, 1012
ApoI	RAATTY	1 cut(s)	680
AsiGI	ACCGGT	1 cut(s)	708
Asp700I	GAANNNNTTC	1 cut(s)	158
AspLEI	GCGC	2 cut(s)	304, 884
AspS9I	GGNCC	2 cut(s)	642, 706
AsuC2I	CCSGG	3 cut(s)	128, 176, 995
AsuHPI	GGTGA	2 cut(s)	913, 923
AvaII	GGWCC	1 cut(s)	706
AxyI	CCTNAGG	1 cut(s)	726
BamHI	GGATCC	1 cut(s)	199
BanII	GRGCYC	1 cut(s)	808
BauI	CACGAG	1 cut(s)	143
BbsI	GAAGAC	1 cut(s)	555
Bbv12I	GWGCWC	1 cut(s)	402
BbvI	GCAGC	7 cut(s)	252, 300, 627, 750, 755, 915, 999
BccI	CCATC	5 cut(s)	22, 179, 352, 497, 649
BceAI	ACGGC	2 cut(s)	442, 857
BcgI	CGANNNNNNTGC	2 cut(s)	910, 944
BciT130I	CCWGG	3 cut(s)	260, 521, 982
BciVI	GTATCC	1 cut(s)	198
BcnI	CCSGG	3 cut(s)	128, 176, 995
BcoDI	GTCTC	7 cut(s)	50, 56, 106, 501, 534, 587, 588
BfaI	CTAG	2 cut(s)	242, 635
BfmI	CTRYAG	1 cut(s)	764
BfuI	GTATCC	1 cut(s)	198
BglI	GCCNNNNNGGC	1 cut(s)	937
BglII	AGATCT	1 cut(s)	648
BmcAI	AGTACT	1 cut(s)	74
Bme1390I	CCNGG	6 cut(s)	128, 176, 260, 521, 982, 995
Bme18I	GGWCC	1 cut(s)	706
BmgBI	CACGTC	1 cut(s)	574
BmgT120I	GGNCC	2 cut(s)	642, 706
BmiI	GGNNCC	3 cut(s)	201, 626, 807
BmrFI	CCNGG	6 cut(s)	128, 176, 260, 521, 982, 995
BmsI	GCATC	3 cut(s)	289, 597, 730
BpiI	GAAGAC	1 cut(s)	555
BplI	GAGNNNNNCTC	2 cut(s)	790, 822
BpmI	CTGGAG	3 cut(s)	242, 683, 1098
Bpu10I	CCTNAGC	1 cut(s)	279
BpuMI	CCSGG	3 cut(s)	128, 176, 995
Bsa29I	ATCGAT	1 cut(s)	674
BsaAI	YACGTR	1 cut(s)	736
BsaHI	GRCGYC	5 cut(s)	23, 32, 284, 562, 815
BsaJI	CCNNGG	5 cut(s)	114, 771, 873, 949, 968
BsaWI	WCCGGW	2 cut(s)	627, 708
BsaXI	ACNNNNNCTCC	4 cut(s)	62, 92, 827, 857
Bsc4I	CCNNNNNNNGG	1 cut(s)	242
Bse118I	RCCGGY	4 cut(s)	708, 746, 811, 1002
Bse1I	ACTGG	2 cut(s)	80, 1086
Bse21I	CCTNAGG	1 cut(s)	726
Bse3DI	GCAATG	1 cut(s)	597
BseBI	CCWGG	3 cut(s)	260, 521, 982
BseCI	ATCGAT	1 cut(s)	674
BseDI	CCNNGG	5 cut(s)	114, 771, 873, 949, 968
BseGI	GGATG	7 cut(s)	14, 171, 304, 508, 588, 745, 871
BseLI	CCNNNNNNNGG	1 cut(s)	242
BseMI	GCAATG	1 cut(s)	597
BseMII	CTCAG	5 cut(s)	293, 717, 768, 873, 965
BseNI	ACTGG	2 cut(s)	80, 1086
BseRI	GAGGAG	6 cut(s)	308, 476, 479, 482, 1052, 1055
BseX3I	CGGCCG	1 cut(s)	177
BseXI	GCAGC	7 cut(s)	252, 300, 627, 750, 755, 915, 999
Bsh1236I	CGCG	4 cut(s)	37, 99, 289, 570
Bsh1285I	CGRYCG	3 cut(s)	180, 215, 678
BshFI	GGCC	5 cut(s)	53, 179, 644, 848, 872
BshTI	ACCGGT	1 cut(s)	708
BshVI	ATCGAT	1 cut(s)	674
BsiEI	CGRYCG	3 cut(s)	180, 215, 678
BsiHKAI	GWGCWC	1 cut(s)	402
BslFI	GGGAC	1 cut(s)	383
BslI	CCNNNNNNNGG	1 cut(s)	242
BsmAI	GTCTC	7 cut(s)	50, 56, 106, 501, 534, 587, 588
BsmBI	CGTCTC	5 cut(s)	50, 106, 501, 534, 587
BsmFI	GGGAC	1 cut(s)	383
BsmI	GAATGC	1 cut(s)	829
BsnI	GGCC	5 cut(s)	53, 179, 644, 848, 872
Bsp1286I	GDGCHC	2 cut(s)	402, 808
Bsp143I	GATC	8 cut(s)	38, 199, 212, 220, 488, 648, 675, 1024
Bsp19I	CCATGG	1 cut(s)	949
Bsp68I	TCGCGA	1 cut(s)	570
BspACI	CCGC	9 cut(s)	26, 35, 180, 191, 268, 586, 618, 1074, 1095
BspANI	GGCC	5 cut(s)	53, 179, 644, 848, 872
BspCNI	CTCAG	5 cut(s)	292, 718, 769, 872, 966
BspDI	ATCGAT	1 cut(s)	674
BspFNI	CGCG	4 cut(s)	37, 99, 289, 570
BspLI	GGNNCC	3 cut(s)	201, 626, 807
BspMAI	CTGCAG	1 cut(s)	768
BspPI	GGATC	3 cut(s)	194, 207, 1019
BsrDI	GCAATG	1 cut(s)	597
BsrFI	RCCGGY	4 cut(s)	708, 746, 811, 1002
BsrI	ACTGG	2 cut(s)	80, 1086
BssAI	RCCGGY	4 cut(s)	708, 746, 811, 1002
BssECI	CCNNGG	5 cut(s)	114, 771, 873, 949, 968
BssMI	GATC	8 cut(s)	38, 199, 212, 220, 488, 648, 675, 1024
BssNI	GRCGYC	5 cut(s)	23, 32, 284, 562, 815
BssSI	CACGAG	1 cut(s)	143
BssT1I	CCWWGG	3 cut(s)	771, 949, 968
Bst2BI	CACGAG	1 cut(s)	143
Bst2UI	CCWGG	3 cut(s)	260, 521, 982
Bst4CI	ACNGT	5 cut(s)	115, 158, 404, 843, 1066
Bst6I	CTCTTC	2 cut(s)	468, 507
BstACI	GRCGYC	5 cut(s)	23, 32, 284, 562, 815
BstBAI	YACGTR	1 cut(s)	736
BstC8I	GCNNGC	3 cut(s)	613, 748, 1056
BstDEI	CTNAG	5 cut(s)	279, 726, 777, 859, 974
BstDSI	CCRYGG	3 cut(s)	114, 873, 949
BstEII	GGTNACC	1 cut(s)	944
BstF5I	GGATG	7 cut(s)	14, 171, 304, 508, 588, 745, 871
BstFNI	CGCG	4 cut(s)	37, 99, 289, 570
BstHHI	GCGC	2 cut(s)	304, 884
BstKTI	GATC	8 cut(s)	41, 202, 215, 223, 491, 651, 678, 1027
BstMAI	GTCTC	7 cut(s)	50, 56, 106, 501, 534, 587, 588
BstMBI	GATC	8 cut(s)	38, 199, 212, 220, 488, 648, 675, 1024
BstMCI	CGRYCG	3 cut(s)	180, 215, 678
BstNI	CCWGG	3 cut(s)	260, 521, 982
BstNSI	RCATGY	1 cut(s)	556
BstPI	GGTNACC	1 cut(s)	944
BstSCI	CCNGG	6 cut(s)	126, 174, 258, 519, 980, 993
BstSFI	CTRYAG	1 cut(s)	764
BstUI	CGCG	4 cut(s)	37, 99, 289, 570
BstV1I	GCAGC	7 cut(s)	252, 300, 627, 750, 755, 915, 999
BstV2I	GAAGAC	1 cut(s)	555
BstX2I	RGATCY	2 cut(s)	199, 648
BstYI	RGATCY	2 cut(s)	199, 648
BstZI	CGGCCG	1 cut(s)	177
Bsu15I	ATCGAT	1 cut(s)	674
Bsu36I	CCTNAGG	1 cut(s)	726
BsuI	GTATCC	1 cut(s)	198
BsuRI	GGCC	5 cut(s)	53, 179, 644, 848, 872
BsuTUI	ATCGAT	1 cut(s)	674
BtgI	CCRYGG	3 cut(s)	114, 873, 949
BtrI	CACGTC	1 cut(s)	574
BtsCI	GGATG	7 cut(s)	14, 171, 304, 508, 588, 745, 871
BtsI	GCAGTG	2 cut(s)	85, 200
BtsIMutI	CAGTG	3 cut(s)	85, 200, 409
BtuMI	TCGCGA	1 cut(s)	570
Cac8I	GCNNGC	3 cut(s)	613, 748, 1056
CaiI	CAGNNNCTG	1 cut(s)	265
CfoI	GCGC	2 cut(s)	304, 884
Cfr10I	RCCGGY	4 cut(s)	708, 746, 811, 1002
Cfr13I	GGNCC	2 cut(s)	642, 706
ClaI	ATCGAT	1 cut(s)	674
CpoI	CGGWCCG	1 cut(s)	706
CseI	GACGC	6 cut(s)	31, 33, 40, 88, 273, 804
Csp6I	GTAC	2 cut(s)	73, 712
CspAI	ACCGGT	1 cut(s)	708
CspI	CGGWCCG	1 cut(s)	706
CviAII	CATG	4 cut(s)	553, 933, 941, 950
CviQI	GTAC	2 cut(s)	73, 712
DdeI	CTNAG	5 cut(s)	279, 726, 777, 859, 974
DpnI	GATC	8 cut(s)	40, 201, 214, 222, 490, 650, 677, 1026
DpnII	GATC	8 cut(s)	38, 199, 212, 220, 488, 648, 675, 1024
DrdI	GACNNNNNNGTC	1 cut(s)	564
DseDI	GACNNNNNNGTC	1 cut(s)	564
EaeI	YGGCCR	2 cut(s)	177, 846
EagI	CGGCCG	1 cut(s)	177
Eam1104I	CTCTTC	2 cut(s)	468, 507
EarI	CTCTTC	2 cut(s)	468, 507
EciI	GGCGGA	1 cut(s)	1110
EclXI	CGGCCG	1 cut(s)	177
Eco130I	CCWWGG	3 cut(s)	771, 949, 968
Eco24I	GRGCYC	1 cut(s)	808
Eco32I	GATATC	1 cut(s)	133
Eco47I	GGWCC	1 cut(s)	706
Eco52I	CGGCCG	1 cut(s)	177
Eco57I	CTGAAG	1 cut(s)	331
Eco81I	CCTNAGG	1 cut(s)	726
Eco91I	GGTNACC	1 cut(s)	944
EcoO65I	GGTNACC	1 cut(s)	944
EcoRI	GAATTC	1 cut(s)	680
EcoRII	CCWGG	3 cut(s)	258, 519, 980
EcoRV	GATATC	1 cut(s)	133
EcoT14I	CCWWGG	3 cut(s)	771, 949, 968
EcoT38I	GRGCYC	1 cut(s)	808
ErhI	CCWWGG	3 cut(s)	771, 949, 968
Esp3I	CGTCTC	5 cut(s)	50, 106, 501, 534, 587
FaeI	CATG	4 cut(s)	556, 936, 944, 953
FaiI	YATR	9 cut(s)	68, 554, 753, 887, 889, 899, 934, 942, 951
FaqI	GGGAC	1 cut(s)	383
FatI	CATG	4 cut(s)	552, 932, 940, 949
FauI	CCCGC	1 cut(s)	611
FauNDI	CATATG	1 cut(s)	887
FblI	GTMKAC	1 cut(s)	228
FokI	GGATG	6 cut(s)	158, 311, 515, 575, 752, 878
FriOI	GRGCYC	1 cut(s)	808
FspBI	CTAG	2 cut(s)	242, 635
GlaI	GCGC	2 cut(s)	303, 883
GsuI	CTGGAG	3 cut(s)	242, 683, 1098
HaeIII	GGCC	5 cut(s)	53, 179, 644, 848, 872
HgaI	GACGC	6 cut(s)	31, 33, 40, 88, 273, 804
HhaI	GCGC	2 cut(s)	304, 884
Hin1I	GRCGYC	5 cut(s)	23, 32, 284, 562, 815
Hin1II	CATG	4 cut(s)	556, 936, 944, 953
Hin6I	GCGC	2 cut(s)	302, 882
HinP1I	GCGC	2 cut(s)	302, 882
HincII	GTYRAC	1 cut(s)	229
HindII	GTYRAC	1 cut(s)	229
HinfI	GANTC	5 cut(s)	121, 167, 238, 631, 701
HphI	GGTGA	2 cut(s)	913, 923
Hpy166II	GTNNAC	1 cut(s)	229
Hpy188I	TCNGA	7 cut(s)	49, 220, 493, 593, 706, 835, 862
Hpy188III	TCNNGA	7 cut(s)	210, 349, 569, 635, 652, 725, 1028
Hpy8I	GTNNAC	1 cut(s)	229
HpyAV	CCTTC	2 cut(s)	216, 789
HpyCH4III	ACNGT	5 cut(s)	115, 158, 404, 843, 1066
HpyCH4IV	ACGT	3 cut(s)	562, 573, 735
HpyCH4V	TGCA	7 cut(s)	90, 150, 532, 743, 766, 891, 960
HpyF3I	CTNAG	5 cut(s)	279, 726, 777, 859, 974
HpySE526I	ACGT	3 cut(s)	562, 573, 735
Hsp92I	GRCGYC	5 cut(s)	23, 32, 284, 562, 815
Hsp92II	CATG	4 cut(s)	556, 936, 944, 953
HspAI	GCGC	2 cut(s)	302, 882
KroI	GCCGGC	1 cut(s)	746
KroNI	GCCGGC	1 cut(s)	748
Kzo9I	GATC	8 cut(s)	38, 199, 212, 220, 488, 648, 675, 1024
LmnI	GCTCC	2 cut(s)	811, 1079
Lsp1109I	GCAGC	7 cut(s)	252, 300, 627, 750, 755, 915, 999
LweI	GCATC	3 cut(s)	289, 597, 730
MaeI	CTAG	2 cut(s)	242, 635
MaeII	ACGT	3 cut(s)	562, 573, 735
MaeIII	GTNAC	4 cut(s)	434, 837, 944, 1060
MalI	GATC	8 cut(s)	40, 201, 214, 222, 490, 650, 677, 1026
MboI	GATC	8 cut(s)	38, 199, 212, 220, 488, 648, 675, 1024
MflI	RGATCY	2 cut(s)	199, 648
MhlI	GDGCHC	2 cut(s)	402, 808
MluCI	AATT	2 cut(s)	680, 1102
MluI	ACGCGT	1 cut(s)	97
MlyI	GAGTC	1 cut(s)	232
MroNI	GCCGGC	1 cut(s)	746
MroXI	GAANNNNTTC	1 cut(s)	158
MspA1I	CMGCKG	2 cut(s)	618, 1076
MspR9I	CCNGG	6 cut(s)	128, 176, 260, 521, 982, 995
Mva1269I	GAATGC	1 cut(s)	829
MvaI	CCWGG	3 cut(s)	260, 521, 982
MvnI	CGCG	4 cut(s)	37, 99, 289, 570
NaeI	GCCGGC	1 cut(s)	748
NciI	CCSGG	3 cut(s)	128, 176, 995
NcoI	CCATGG	1 cut(s)	949
NdeI	CATATG	1 cut(s)	887
NdeII	GATC	8 cut(s)	38, 199, 212, 220, 488, 648, 675, 1024
NgoMIV	GCCGGC	1 cut(s)	746
NlaIII	CATG	4 cut(s)	556, 936, 944, 953
NlaIV	GGNNCC	3 cut(s)	201, 626, 807
NmeAIII	GCCGAG	2 cut(s)	79, 670
NmuCI	GTSAC	1 cut(s)	1060
NruI	TCGCGA	1 cut(s)	570
NspI	RCATGY	1 cut(s)	556
PcsI	WCGNNNNNNNCGW	5 cut(s)	141, 162, 381, 696, 839
PctI	GAATGC	1 cut(s)	829
PdiI	GCCGGC	1 cut(s)	748
PdmI	GAANNNNTTC	1 cut(s)	158
PfeI	GAWTC	4 cut(s)	121, 167, 631, 701
PflFI	GACNNNGTC	2 cut(s)	561, 564
PfoI	TCCNGGA	2 cut(s)	126, 980
PinAI	ACCGGT	1 cut(s)	708
Ple19I	CGATCG	2 cut(s)	215, 678
PleI	GAGTC	1 cut(s)	232
PpsI	GAGTC	1 cut(s)	232
Ppu21I	YACGTR	1 cut(s)	736
Psp6I	CCWGG	3 cut(s)	258, 519, 980
PspEI	GGTNACC	1 cut(s)	944
PspGI	CCWGG	3 cut(s)	258, 519, 980
PspN4I	GGNNCC	3 cut(s)	201, 626, 807
PspPI	GGNCC	2 cut(s)	642, 706
PstI	CTGCAG	1 cut(s)	768
PstNI	CAGNNNCTG	1 cut(s)	265
PsuI	RGATCY	2 cut(s)	199, 648
PsyI	GACNNNGTC	2 cut(s)	561, 564
PvuI	CGATCG	2 cut(s)	215, 678
RruI	TCGCGA	1 cut(s)	570
RsaI	GTAC	2 cut(s)	74, 713
RsaNI	GTAC	2 cut(s)	73, 712
Rsr2I	CGGWCCG	1 cut(s)	706
RsrII	CGGWCCG	1 cut(s)	706
SalI	GTCGAC	1 cut(s)	227
Sau3AI	GATC	8 cut(s)	38, 199, 212, 220, 488, 648, 675, 1024
Sau96I	GGNCC	2 cut(s)	642, 706
ScaI	AGTACT	1 cut(s)	74
SchI	GAGTC	1 cut(s)	232
ScrFI	CCNGG	6 cut(s)	128, 176, 260, 521, 982, 995
SduI	GDGCHC	2 cut(s)	402, 808
SfaNI	GCATC	3 cut(s)	289, 597, 730
SfcI	CTRYAG	1 cut(s)	764
SgrAI	CRCCGGYG	1 cut(s)	811
SinI	GGWCC	1 cut(s)	706
Sse9I	AATT	2 cut(s)	680, 1102
SsiI	CCGC	9 cut(s)	26, 35, 180, 191, 268, 586, 618, 1074, 1095
SspMI	CTAG	2 cut(s)	242, 635
StyD4I	CCNGG	6 cut(s)	126, 174, 258, 519, 980, 993
StyI	CCWWGG	3 cut(s)	771, 949, 968
TaaI	ACNGT	5 cut(s)	115, 158, 404, 843, 1066
TaiI	ACGT	3 cut(s)	565, 576, 738
TaqI	TCGA	8 cut(s)	165, 228, 408, 674, 678, 690, 818, 920
TasI	AATT	2 cut(s)	680, 1102
TatI	WGTACW	1 cut(s)	72
TauI	GCSGC	5 cut(s)	28, 37, 182, 271, 1076
TfiI	GAWTC	4 cut(s)	121, 167, 631, 701
TscAI	CASTG	3 cut(s)	92, 200, 409
TseFI	GTSAC	1 cut(s)	1060
TseI	GCWGC	7 cut(s)	265, 313, 615, 743, 763, 928, 1012
Tsp45I	GTSAC	1 cut(s)	1060
TspGWI	ACGGA	1 cut(s)	74
TspRI	CASTG	3 cut(s)	92, 200, 409
Tth111I	GACNNNGTC	2 cut(s)	561, 564
VpaK11BI	GGWCC	1 cut(s)	706
XapI	RAATTY	1 cut(s)	680
XbaI	TCTAGA	1 cut(s)	634
XceI	RCATGY	1 cut(s)	556
XcmI	CCANNNNNNNNNTGG	1 cut(s)	112
XmiI	GTMKAC	1 cut(s)	228
XmnI	GAANNNNTTC	1 cut(s)	158
XspI	CTAG	2 cut(s)	242, 635
ZraI	GACGTC	1 cut(s)	563
ZrmI	AGTACT	1 cut(s)	74

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.