Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002174

Physical Location & Seq

Genomic Coordinates Reverse (-)

2958929 .. 2963697

Gene Structure 4769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1042400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGTTTGCCAAACTGCGGCAGCGAATAGTGATCGGTCAAGGACGTATTGGACTCCAACGATGGAACGATACTTTATTGATCTTATGTTGGAGCAATTGCATAGAGGAGCTCGTGTTGGCCATACTTTCAACAAGCAGGCCTGGACCGAAATGCTCAGCGTGTTTAATGCACAATTTGGCTCTCATTATGACAAAGATGTCTTGAAAAGCCGGTATACGACTTTGTGGAAGCAGTTCAATGATGTGAAAAATATTCTTGGTCAGAATGGGTTTTCTTGGGACGAAAGTCGTCAGATGGTGGTAGCTGATGATTACATATGGGATGCTTACATCAAGGTTCACCCGGATGCACGGCCTTACAGAACTAAACCAGTGTTGAATTTCAATGAATTATGCCTCATTTATGGCTATACAACTGCTGATGGAAGATACAGTCGATCAAGCCATGACGTAGATTTGGATGATGAAGGTCAAGGAGTAACCACAGGTGACGGAATGGGCAGCCTTGCTCCTTCAAGTAGCGAGCGCCCAAGGACAGAATGGTCACTAGAAATGGACCAGTATTTCATTGACATTATGCTGGAACAAGTATCAATTGGCAATAAGCCTGATAATGCATTCAACAAACAAGCCTGGACGGTAATGCTTGCCAAATTTAATGAAGAATTTGGACCTCAACATAGCTTACGGGTTTTAAGGCATCGATACAAGAAACTGTTGAAGTATTATAGTGATGCAACAATTTTGCTAAGACAAAAGGACTTTTCCTGGGATGAAACGCAACATATGATTGTAGCTGATGATGAGGTTTGGGATGCATATACAAAGGTACGCCCTCATGCACGGACATATAAAACAAAAGCCTTGCCAAATTTATTTAGCATGTCCCTGTTATTTACAACTGAATGTGATCTTGGCACCGACAATCATTTGCATCTACAGAAAAACCTTGATGATACTTCACACGTCAAAGCTGGGGAAGGAAAGGGGAGCCAGACTCCAAATGTCAGTGAGCGTTCAAGGACATATTGGACACCAATAATGGATCGTTACCTCCTTGAGTTGTTACAAGACCAGGTGCACAGAGGAAATAAACTAGGACAAACTTTCATAACTCAGGCTTGGAATGACATGGTTGTATCTTTCAATGTGCGATTCAAATCTCACCATGATAAAGATGTTTTGAAGAATCGTTTCAAACATTGGCGAAAGCAGTACAATGACATCAAGATTCTTCTTAAGCACGGTGGATTTTCATGGGATGAATCACGAGAAATGGTAACAGCTGAGGATAGTGTTTGGGATGGTTATATTAAGAACCATCCTGATGCTCGATCATATAGAGTTAAAACTATACCAGGCTACAACAAATTGCGTGTTATTTTTGAAGAAGAAACATATGATGGAAGATACAGTCGTTTGGCGTTCAATTCAGATCCATCTGGTGAATTAGCAGATTTGATGACTGGTGCGGAGAAGAATGACACGCCCTACATTCCCGTTCTTCCTTTGCCAATAGATTGGACACCAACAATGGACCGTTATTTTATTGATCTTATGATAGATCAGCTGCATAGTGGGAATAAGATTAATCACACATTCAATGAGCAAGCATGGGCTCAAATGCTTGAATCATTTAATATGAAATTTGGAATTCAGTGTGATAAACACGCTCTAGAAGATCGATATGCATGCTTGGTGAAGCAGCATGACTGCATCAGCAGTATTCTCACTCATGCTGGATTTATGTGGGATGAAACTCAGCAAATGATAACCGCTGAAGATGACATTTGGGAAGCTTACATTAAGGAACACCCAGATGCTATCTCCTATAGAAATGCATTCTTAGGTGGTTATAGCGATTTGAGCAAGATTTGTGTAAATAGAGAATTAGACGGAAAATTCAGTGGGCAGGGTGTAGGTATGCAAGCTGGCCCTATTGTGTTTGAAATAGAGATGAATGGAGCATCTGGAGATCTGCAATTGTTAGCCGAGGACGTTGAAATATCTGATCAACAGAGAAAGCGACCAACTTTGACGCCACCAAACCCAGGACGCTCCAAGAAGGCACAGAAAACAGGCAAGGATACGCAAAAGGCTCCAACTGAGATGGTAGGTGGGGTTACAAAACTCGCAGACAATAAGGAGAAAAATAACTGCACATCAATAGAAAAAGCAATCGATGCACTTCAAGCTTTACCAGGTATGGATGATGAGCTTATGTTGGATGCTTGTGATCTATTAGAAGATGAGAGAAAGGCAAAGACATTCCTGGCCTTGGATGGGGCGCTGCGCAAGAAGTGGTTACTGAGGAAGCTCCGTCCGCGGTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_3

Protein Analysis

778

Amino Acids

89.6

Weight (kDa)

5.98

Isoelectric Point (pI)

30.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_3	PF12776	16 - 110	1.5e-34	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_3	PF12776	180 - 274	8e-28	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_3	PF12776	343 - 437	2.1e-29	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_3	PF12776	508 - 601	3.8e-28	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24960 AT2G24960
malus_domestica	MD04G1207700.v1.1 MD12G1043800.v1.1 MD14G1042600.v1.1 MD15G1042400.v1.1
prunus_persica	Prupe.1G395600_v2.0.a1 Prupe.1G395600_v2.0.a1 Prupe.1G395600_v2.0.a1 Prupe.1G395600_v2.0.a1 Prupe.1G395600_v2.0.a1 Prupe.1G395600_v2.0.a1 Prupe.1G395600_v2.0.a1 Prupe.4G276100_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.6G328700_v2.0.a1 Prupe.7G091300_v2.0.a1 Prupe.7G091300_v2.0.a1 Prupe.7G091300_v2.0.a1 Prupe.7G091300_v2.0.a1 Prupe.7G091300_v2.0.a1 Prupe.7G091300_v2.0.a1 Prupe.7G091300_v2.0.a1
pyrus_communis	pycom04g18390 pycom12g03760 pycom14g03630 pycom15g03950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	197, 541
Acc16I	TGCGCA	1 cut(s)	2294
AccB1I	GGYRCC	1 cut(s)	917
AccI	GTMKAC	1 cut(s)	215
AccII	CGCG	1 cut(s)	2326
AciI	CCGC	5 cut(s)	17, 1472, 1776, 2324, 2326
AclWI	GGATC	2 cut(s)	1053, 1430
AcoI	YGGCCR	1 cut(s)	118
AcsI	RAATTY	7 cut(s)	379, 653, 665, 871, 1646, 1653, 1901
AcuI	CTGAAG	1 cut(s)	1800
AcyI	GRCGYC	1 cut(s)	2039
AfaI	GTAC	2 cut(s)	831, 1217
AfiI	CCNNNNNNNGG	4 cut(s)	16, 2051, 2278, 2283
AflII	CTTAAG	1 cut(s)	1238
AflIII	ACRYGT	1 cut(s)	964
AjiI	CACGTC	1 cut(s)	967
AjnI	CCWGG	8 cut(s)	140, 632, 767, 1074, 1357, 2050, 2200, 2271
AjuI	GAANNNNNNNTTGG	2 cut(s)	897, 929
Alw21I	GWGCWC	2 cut(s)	112, 1083
Alw44I	GTGCAC	1 cut(s)	1079
AlwI	GGATC	2 cut(s)	1053, 1430
AoxI	GGCC	5 cut(s)	118, 138, 353, 1933, 2274
ApaLI	GTGCAC	1 cut(s)	1079
ApeKI	GCWGC	5 cut(s)	20, 501, 1570, 1705, 2290
ApoI	RAATTY	7 cut(s)	379, 653, 665, 871, 1646, 1653, 1901
AseI	ATTAAT	1 cut(s)	1590
Asp700I	GAANNNNTTC	2 cut(s)	233, 1193
AspLEI	GCGC	3 cut(s)	528, 2290, 2295
AspS9I	GGNCC	5 cut(s)	144, 556, 671, 1537, 1934
AsuC2I	CCSGG	1 cut(s)	344
AsuHPI	GGTGA	5 cut(s)	332, 500, 1157, 1457, 1711
AvaII	GGWCC	4 cut(s)	144, 556, 671, 1537
BaeGI	GKGCMC	1 cut(s)	1083
BaeI	ACNNNNGTAYC	2 cut(s)	1402, 1435
BalI	TGGCCA	1 cut(s)	120
BanI	GGYRCC	1 cut(s)	917
BanII	GRGCYC	2 cut(s)	112, 1621
BauI	CACGAG	2 cut(s)	111, 1269
Bbv12I	GWGCWC	2 cut(s)	112, 1083
BbvCI	CCTCAGC	1 cut(s)	1287
BbvI	GCAGC	5 cut(s)	32, 513, 1557, 1717, 2277
BccI	CCATC	9 cut(s)	55, 289, 416, 1298, 1329, 1397, 1447, 2104, 2276
BceAI	ACGGC	1 cut(s)	368
BcgI	CGANNNNNNTGC	2 cut(s)	1674, 1708
BciT130I	CCWGG	8 cut(s)	142, 634, 769, 1076, 1359, 2052, 2202, 2273
BciVI	GTATCC	1 cut(s)	2080
BclI	TGATCA	1 cut(s)	2011
BcnI	CCSGG	1 cut(s)	344
BfaI	CTAG	3 cut(s)	548, 1097, 1676
BfmI	CTRYAG	2 cut(s)	938, 1831
BfoI	RGCGCY	2 cut(s)	529, 2291
BfrI	CTTAAG	1 cut(s)	1238
BfuI	GTATCC	1 cut(s)	2080
BglII	AGATCT	1 cut(s)	1975
BisI	GCNGC	6 cut(s)	18, 21, 502, 1571, 1706, 2291
BlpI	GCTNAGC	1 cut(s)	155
BlsI	GCNGC	6 cut(s)	19, 22, 503, 1572, 1707, 2292
Bme1390I	CCNGG	9 cut(s)	142, 344, 634, 769, 1076, 1359, 2052, 2202, 2273
Bme18I	GGWCC	4 cut(s)	144, 556, 671, 1537
BmgBI	CACGTC	1 cut(s)	967
BmgT120I	GGNCC	5 cut(s)	144, 556, 671, 1537, 1934
BmiI	GGNNCC	3 cut(s)	919, 992, 2100
BmrFI	CCNGG	9 cut(s)	142, 344, 634, 769, 1076, 1359, 2052, 2202, 2273
BoxI	GACNNNNGTC	1 cut(s)	285
BplI	GAGNNNNNCTC	2 cut(s)	982, 1014
BpmI	CTGGAG	1 cut(s)	1992
Bpu10I	CCTNAGC	1 cut(s)	1287
Bpu1102I	GCTNAGC	1 cut(s)	155
BpuEI	CTTGAG	1 cut(s)	1079
BpuMI	CCSGG	1 cut(s)	344
Bsa29I	ATCGAT	3 cut(s)	703, 1684, 2181
BsaBI	GATNNNNATC	1 cut(s)	1159
BsaHI	GRCGYC	1 cut(s)	2039
BsaJI	CCNNGG	6 cut(s)	530, 768, 1992, 2050, 2277, 2324
BsaXI	ACNNNNNCTCC	2 cut(s)	99, 129
Bsc4I	CCNNNNNNNGG	4 cut(s)	16, 2051, 2278, 2283
Bse118I	RCCGGY	1 cut(s)	210
Bse1I	ACTGG	3 cut(s)	371, 559, 1471
Bse8I	GATNNNNATC	1 cut(s)	1159
BseBI	CCWGG	8 cut(s)	142, 634, 769, 1076, 1359, 2052, 2202, 2273
BseCI	ATCGAT	3 cut(s)	703, 1684, 2181
BseDI	CCNNGG	6 cut(s)	530, 768, 1992, 2050, 2277, 2324
BseJI	GATNNNNATC	1 cut(s)	1159
BseLI	CCNNNNNNNGG	4 cut(s)	16, 2051, 2278, 2283
BseMII	CTCAG	6 cut(s)	169, 1130, 1278, 1775, 2097, 2300
BseNI	ACTGG	3 cut(s)	371, 559, 1471
BseRI	GAGGAG	1 cut(s)	120
BseSI	GKGCMC	1 cut(s)	1083
BseXI	GCAGC	5 cut(s)	32, 513, 1557, 1717, 2277
BseYI	CCCAGC	1 cut(s)	974
BsgI	GTGCAG	1 cut(s)	2143
Bsh1236I	CGCG	1 cut(s)	2326
BshFI	GGCC	5 cut(s)	120, 140, 355, 1935, 2276
BshNI	GGYRCC	1 cut(s)	917
BshVI	ATCGAT	3 cut(s)	703, 1684, 2181
BsiHKAI	GWGCWC	2 cut(s)	112, 1083
BsiSI	CCGG	2 cut(s)	211, 344
BslFI	GGGAC	2 cut(s)	293, 871
BslI	CCNNNNNNNGG	4 cut(s)	16, 2051, 2278, 2283
BsmFI	GGGAC	2 cut(s)	293, 871
BsmI	GAATGC	2 cut(s)	617, 1841
BsnI	GGCC	5 cut(s)	120, 140, 355, 1935, 2276
Bsp1286I	GDGCHC	3 cut(s)	112, 1083, 1621
Bsp1720I	GCTNAGC	1 cut(s)	155
BspACI	CCGC	5 cut(s)	17, 1472, 1776, 2324, 2326
BspANI	GGCC	5 cut(s)	120, 140, 355, 1935, 2276
BspCNI	CTCAG	6 cut(s)	168, 1129, 1279, 1774, 2098, 2301
BspDI	ATCGAT	3 cut(s)	703, 1684, 2181
BspFNI	CGCG	1 cut(s)	2326
BspLI	GGNNCC	3 cut(s)	919, 992, 2100
BspPI	GGATC	2 cut(s)	1053, 1430
BspT107I	GGYRCC	1 cut(s)	917
BspTI	CTTAAG	1 cut(s)	1238
BsrFI	RCCGGY	1 cut(s)	210
BsrI	ACTGG	3 cut(s)	371, 559, 1471
BssAI	RCCGGY	1 cut(s)	210
BssECI	CCNNGG	6 cut(s)	530, 768, 1992, 2050, 2277, 2324
BssNAI	GTATAC	1 cut(s)	216
BssNI	GRCGYC	1 cut(s)	2039
BssSI	CACGAG	2 cut(s)	111, 1269
BssT1I	CCWWGG	2 cut(s)	530, 2277
Bst1107I	GTATAC	1 cut(s)	216
Bst2BI	CACGAG	2 cut(s)	111, 1269
Bst2UI	CCWGG	8 cut(s)	142, 634, 769, 1076, 1359, 2052, 2202, 2273
Bst4CI	ACNGT	6 cut(s)	434, 640, 717, 1247, 1415, 1541
BstACI	GRCGYC	1 cut(s)	2039
BstAFI	CTTAAG	1 cut(s)	1238
BstAPI	GCANNNNNTGC	1 cut(s)	2183
BstC8I	GCNNGC	7 cut(s)	138, 524, 648, 1611, 1693, 1929, 1933
BstDEI	CTNAG	8 cut(s)	155, 749, 1116, 1287, 1761, 1846, 2106, 2309
BstDSI	CCRYGG	1 cut(s)	2324
BstFNI	CGCG	1 cut(s)	2326
BstH2I	RGCGCY	2 cut(s)	529, 2291
BstHHI	GCGC	3 cut(s)	528, 2290, 2295
BstMWI	GCNNNNNNNGC	4 cut(s)	1866, 2183, 2192, 2323
BstNI	CCWGG	8 cut(s)	142, 634, 769, 1076, 1359, 2052, 2202, 2273
BstNSI	RCATGY	2 cut(s)	886, 1695
BstPAI	GACNNNNGTC	1 cut(s)	285
BstSCI	CCNGG	9 cut(s)	140, 342, 632, 767, 1074, 1357, 2050, 2200, 2271
BstSFI	CTRYAG	2 cut(s)	938, 1831
BstSLI	GKGCMC	1 cut(s)	1083
BstUI	CGCG	1 cut(s)	2326
BstV1I	GCAGC	5 cut(s)	32, 513, 1557, 1717, 2277
BstX2I	RGATCY	2 cut(s)	1435, 1975
BstXI	CCANNNNNNTGG	1 cut(s)	1521
BstYI	RGATCY	2 cut(s)	1435, 1975
BstZ17I	GTATAC	1 cut(s)	216
Bsu15I	ATCGAT	3 cut(s)	703, 1684, 2181
BsuI	GTATCC	1 cut(s)	2080
BsuRI	GGCC	5 cut(s)	120, 140, 355, 1935, 2276
BsuTUI	ATCGAT	3 cut(s)	703, 1684, 2181
BtgI	CCRYGG	1 cut(s)	2324
BtrI	CACGTC	1 cut(s)	967
BtsIMutI	CAGTG	4 cut(s)	378, 1015, 1664, 1912
Cac8I	GCNNGC	7 cut(s)	138, 524, 648, 1611, 1693, 1929, 1933
CfoI	GCGC	3 cut(s)	528, 2290, 2295
Cfr10I	RCCGGY	1 cut(s)	210
Cfr13I	GGNCC	5 cut(s)	144, 556, 671, 1537, 1934
Cfr42I	CCGCGG	1 cut(s)	2327
ClaI	ATCGAT	3 cut(s)	703, 1684, 2181
CseI	GACGC	2 cut(s)	2047, 2064
CsiI	ACCWGGT	2 cut(s)	1074, 2200
Csp6I	GTAC	2 cut(s)	830, 1216
CviQI	GTAC	2 cut(s)	830, 1216
DdeI	CTNAG	8 cut(s)	155, 749, 1116, 1287, 1761, 1846, 2106, 2309
DrdI	GACNNNNNNGTC	2 cut(s)	197, 541
DseDI	GACNNNNNNGTC	2 cut(s)	197, 541
EaeI	YGGCCR	1 cut(s)	118
Ecl136II	GAGCTC	1 cut(s)	110
Eco130I	CCWWGG	2 cut(s)	530, 2277
Eco147I	AGGCCT	1 cut(s)	140
Eco24I	GRGCYC	2 cut(s)	112, 1621
Eco47I	GGWCC	4 cut(s)	144, 556, 671, 1537
Eco53kI	GAGCTC	1 cut(s)	110
Eco57I	CTGAAG	1 cut(s)	1800
EcoICRI	GAGCTC	1 cut(s)	110
EcoRI	GAATTC	1 cut(s)	1653
EcoRII	CCWGG	8 cut(s)	140, 632, 767, 1074, 1357, 2050, 2200, 2271
EcoT14I	CCWWGG	2 cut(s)	530, 2277
EcoT22I	ATGCAT	4 cut(s)	619, 820, 1693, 1843
EcoT38I	GRGCYC	2 cut(s)	112, 1621
ErhI	CCWWGG	2 cut(s)	530, 2277
FaqI	GGGAC	2 cut(s)	293, 871
FauNDI	CATATG	3 cut(s)	317, 786, 1399
FbaI	TGATCA	1 cut(s)	2011
FblI	GTMKAC	1 cut(s)	215
Fnu4HI	GCNGC	6 cut(s)	18, 21, 502, 1571, 1706, 2291
FriOI	GRGCYC	2 cut(s)	112, 1621
Fsp4HI	GCNGC	6 cut(s)	18, 21, 502, 1571, 1706, 2291
FspBI	CTAG	3 cut(s)	548, 1097, 1676
FspI	TGCGCA	1 cut(s)	2294
GlaI	GCGC	3 cut(s)	527, 2289, 2294
GluI	GCNGC	6 cut(s)	18, 21, 502, 1571, 1706, 2291
GsaI	CCCAGC	1 cut(s)	978
GsuI	CTGGAG	1 cut(s)	1992
HaeII	RGCGCY	2 cut(s)	529, 2291
HaeIII	GGCC	5 cut(s)	120, 140, 355, 1935, 2276
HapII	CCGG	2 cut(s)	211, 344
HgaI	GACGC	2 cut(s)	2047, 2064
HhaI	GCGC	3 cut(s)	528, 2290, 2295
Hin1I	GRCGYC	1 cut(s)	2039
Hin6I	GCGC	3 cut(s)	526, 2288, 2293
HinP1I	GCGC	3 cut(s)	526, 2288, 2293
HindIII	AAGCTT	2 cut(s)	1797, 2193
HinfI	GANTC	7 cut(s)	52, 997, 1155, 1189, 1231, 1265, 1631
HpaII	CCGG	2 cut(s)	211, 344
HphI	GGTGA	5 cut(s)	332, 500, 1157, 1457, 1711
Hpy166II	GTNNAC	3 cut(s)	216, 340, 1081
Hpy188I	TCNGA	4 cut(s)	264, 294, 1435, 2011
Hpy188III	TCNNGA	6 cut(s)	202, 1228, 1269, 1325, 1676, 1971
Hpy8I	GTNNAC	3 cut(s)	216, 340, 1081
HpyAV	CCTTC	4 cut(s)	461, 522, 974, 2059
HpyCH4III	ACNGT	6 cut(s)	434, 640, 717, 1247, 1415, 1541
HpyCH4IV	ACGT	4 cut(s)	44, 450, 966, 1998
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1866, 2183, 2192, 2323
HpyF3I	CTNAG	8 cut(s)	155, 749, 1116, 1287, 1761, 1846, 2106, 2309
HpySE526I	ACGT	4 cut(s)	44, 450, 966, 1998
Hsp92I	GRCGYC	1 cut(s)	2039
HspAI	GCGC	3 cut(s)	526, 2288, 2293
Ksp22I	TGATCA	1 cut(s)	2011
KspI	CCGCGG	1 cut(s)	2327
LmnI	GCTCC	8 cut(s)	91, 107, 514, 990, 1964, 2063, 2104, 2322
Lsp1109I	GCAGC	5 cut(s)	32, 513, 1557, 1717, 2277
MabI	ACCWGGT	2 cut(s)	1074, 2200
MaeI	CTAG	3 cut(s)	548, 1097, 1676
MaeII	ACGT	4 cut(s)	44, 450, 966, 1998
MaeIII	GTNAC	8 cut(s)	478, 488, 543, 1049, 1065, 1279, 2122, 2304
MfeI	CAATTG	3 cut(s)	95, 594, 1982
MflI	RGATCY	2 cut(s)	1435, 1975
MhlI	GDGCHC	3 cut(s)	112, 1083, 1621
MlsI	TGGCCA	1 cut(s)	120
MluNI	TGGCCA	1 cut(s)	120
MlyI	GAGTC	2 cut(s)	46, 991
MmeI	TCCRAC	4 cut(s)	69, 80, 2126, 2205
Mox20I	TGGCCA	1 cut(s)	120
Mph1103I	ATGCAT	4 cut(s)	619, 820, 1693, 1843
MroXI	GAANNNNTTC	2 cut(s)	233, 1193
MscI	TGGCCA	1 cut(s)	120
MseI	TTAA	9 cut(s)	165, 657, 695, 1239, 1314, 1347, 1590, 1638, 1806
MslI	CAYNNNNRTG	3 cut(s)	345, 1326, 1818
Msp20I	TGGCCA	1 cut(s)	120
MspA1I	CMGCKG	4 cut(s)	1286, 1570, 1778, 2326
MspCI	CTTAAG	1 cut(s)	1238
MspI	CCGG	2 cut(s)	211, 344
MspR9I	CCNGG	9 cut(s)	142, 344, 634, 769, 1076, 1359, 2052, 2202, 2273
MteI	GCGCNGCGC	1 cut(s)	2291
MunI	CAATTG	3 cut(s)	95, 594, 1982
Mva1269I	GAATGC	2 cut(s)	617, 1841
MvaI	CCWGG	8 cut(s)	142, 634, 769, 1076, 1359, 2052, 2202, 2273
MvnI	CGCG	1 cut(s)	2326
MwoI	GCNNNNNNNGC	4 cut(s)	1866, 2183, 2192, 2323
NciI	CCSGG	1 cut(s)	344
NdeI	CATATG	3 cut(s)	317, 786, 1399
NlaIV	GGNNCC	3 cut(s)	919, 992, 2100
NmeAIII	GCCGAG	1 cut(s)	2017
NmuCI	GTSAC	2 cut(s)	488, 543
NsbI	TGCGCA	1 cut(s)	2294
NsiI	ATGCAT	4 cut(s)	619, 820, 1693, 1843
NspI	RCATGY	2 cut(s)	886, 1695
PaeI	GCATGC	1 cut(s)	1695
PceI	AGGCCT	1 cut(s)	140
PctI	GAATGC	2 cut(s)	617, 1841
PdmI	GAANNNNTTC	2 cut(s)	233, 1193
PfeI	GAWTC	5 cut(s)	1155, 1189, 1231, 1265, 1631
PkrI	GCNGC	6 cut(s)	19, 22, 503, 1572, 1707, 2292
PleI	GAGTC	2 cut(s)	46, 991
PpsI	GAGTC	2 cut(s)	46, 991
PshAI	GACNNNNGTC	1 cut(s)	285
PshBI	ATTAAT	1 cut(s)	1590
Psp124BI	GAGCTC	1 cut(s)	112
Psp6I	CCWGG	8 cut(s)	140, 632, 767, 1074, 1357, 2050, 2200, 2271
PspFI	CCCAGC	1 cut(s)	974
PspGI	CCWGG	8 cut(s)	140, 632, 767, 1074, 1357, 2050, 2200, 2271
PspN4I	GGNNCC	3 cut(s)	919, 992, 2100
PspPI	GGNCC	5 cut(s)	144, 556, 671, 1537, 1934
PsuI	RGATCY	2 cut(s)	1435, 1975
PvuII	CAGCTG	2 cut(s)	1286, 1570
RsaI	GTAC	2 cut(s)	831, 1217
RsaNI	GTAC	2 cut(s)	830, 1216
RseI	CAYNNNNRTG	3 cut(s)	345, 1326, 1818
SacI	GAGCTC	1 cut(s)	112
SacII	CCGCGG	1 cut(s)	2327
SaqAI	TTAA	9 cut(s)	165, 657, 695, 1239, 1314, 1347, 1590, 1638, 1806
SatI	GCNGC	6 cut(s)	18, 21, 502, 1571, 1706, 2291
Sau96I	GGNCC	5 cut(s)	144, 556, 671, 1537, 1934
SchI	GAGTC	2 cut(s)	46, 991
ScrFI	CCNGG	9 cut(s)	142, 344, 634, 769, 1076, 1359, 2052, 2202, 2273
SduI	GDGCHC	3 cut(s)	112, 1083, 1621
SexAI	ACCWGGT	2 cut(s)	1074, 2200
SfcI	CTRYAG	2 cut(s)	938, 1831
Sfr303I	CCGCGG	1 cut(s)	2327
SgrBI	CCGCGG	1 cut(s)	2327
SinI	GGWCC	4 cut(s)	144, 556, 671, 1537
SmiMI	CAYNNNNRTG	3 cut(s)	345, 1326, 1818
SmlI	CTYRAG	2 cut(s)	1058, 1238
SmoI	CTYRAG	2 cut(s)	1058, 1238
SphI	GCATGC	1 cut(s)	1695
SseBI	AGGCCT	1 cut(s)	140
SsiI	CCGC	5 cut(s)	17, 1472, 1776, 2324, 2326
SspI	AATATT	1 cut(s)	253
SspMI	CTAG	3 cut(s)	548, 1097, 1676
SstI	GAGCTC	1 cut(s)	112
StuI	AGGCCT	1 cut(s)	140
StyD4I	CCNGG	9 cut(s)	140, 342, 632, 767, 1074, 1357, 2050, 2200, 2271
StyI	CCWWGG	2 cut(s)	530, 2277
TaaI	ACNGT	6 cut(s)	434, 640, 717, 1247, 1415, 1541
TaiI	ACGT	4 cut(s)	47, 453, 969, 2001
TaqI	TCGA	5 cut(s)	436, 703, 1333, 1684, 2181
TaqII	GACCGA	2 cut(s)	24, 161
TatI	WGTACW	1 cut(s)	1215
TauI	GCSGC	1 cut(s)	20
TfiI	GAWTC	5 cut(s)	1155, 1189, 1231, 1265, 1631
Tru1I	TTAA	9 cut(s)	165, 657, 695, 1239, 1314, 1347, 1590, 1638, 1806
Tru9I	TTAA	9 cut(s)	165, 657, 695, 1239, 1314, 1347, 1590, 1638, 1806
TscAI	CASTG	4 cut(s)	378, 1015, 1664, 1912
TseFI	GTSAC	2 cut(s)	488, 543
TseI	GCWGC	5 cut(s)	20, 501, 1570, 1705, 2290
Tsp45I	GTSAC	2 cut(s)	488, 543
TspGWI	ACGGA	4 cut(s)	507, 859, 1911, 2309
TspRI	CASTG	4 cut(s)	378, 1015, 1664, 1912
Vha464I	CTTAAG	1 cut(s)	1238
VneI	GTGCAC	1 cut(s)	1079
VpaK11BI	GGWCC	4 cut(s)	144, 556, 671, 1537
VspI	ATTAAT	1 cut(s)	1590
XapI	RAATTY	7 cut(s)	379, 653, 665, 871, 1646, 1653, 1901
XbaI	TCTAGA	1 cut(s)	1675
XceI	RCATGY	2 cut(s)	886, 1695
XcmI	CCANNNNNNNNNTGG	1 cut(s)	537
XmiI	GTMKAC	1 cut(s)	215
XmnI	GAANNNNTTC	2 cut(s)	233, 1193
XspI	CTAG	3 cut(s)	548, 1097, 1676
Zsp2I	ATGCAT	4 cut(s)	619, 820, 1693, 1843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.