MD15G1216700.v1.1

GDP-fucose protein O-fucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0015446
Physical Location & Seq
Reverse (-)
17476690 .. 17480589
3900 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1216700.v1.1.491

Sequence Viewer

Length: 1824 bp
ATGGCGTCTCGCAACAGCCCGAGATTCTCCGGTGCAATGACACGGCGAGCTCACTCGTTCAAGCGCAACCCCAACGCCAGCGCCGCCGTCGCCAACACCGGCAGCTCACACAGCAACAACGGAAGTGGCAGCGGCACCAACGGCGGCAATGGCGTGTTCGGCGGCGCCGGCGAGTACGAGATTGATCTCCAGCTGAACTCGCCCAGATCTGAAATCGGCGGGAACTCGGTTCCGGGTGATGGGTTTGACTCGGTTTTGGAAAGGAAGCAGACCCACAACCATGTGAGCCAGAGAGTAGCGTGGGGGTTTCTGAGAAGGCCAATTGGATCTGCAGTGGTGGACTCGCGGTTGAGGGAGAAGAGGAAACTTGGCCATTGGATGTTCTTTGCTTTTTGTGGGGTTTGTTTGTTTCTTGGGATTCTGAAGATTTGTGCAACTGGTTGGTTTGGATCTGTTATTGAAACTGCTACGTCCAATAAGGATGGTTCTGACTCCATGAATATTTTAAAACGGATGGATCAAAGCTCTCATGAATATGGATATCAGGATGGAGGAGGTCATGTTGAACAAACTATAATGATGGCGTCTGGTGTGAACCGTGTGGTTGTTGAAGAGATAAGCGCTGAATACACAGGTATCTGGTTCCGACCAAACAGTGAGAATTACAGTCAGTGCATTGAGTTGTCAAAAATTCACAAAAAGCTGGACGTGAAGACCAATGGTTACATTCTTATAAATGCCAATGGCGGCTTGAATCAGATGAGATTTGGGATTTGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAATGCTTGTCCTACCTTCACTTGATCACACTTCCTACTGGGCTGATGAGAGTGGTTTTAAAGATCTGTTTGATTGGCAACACTTCATTGAGACTCTAACGGATGATATCCACATAGTTGAAACATTACCCTCAGCCTATGCTGGAATTGAGCCATTCAACAAGGCACTAATATCTTGGTCAAAGGCTAGTTATTATAAGTCAGAGGTTCTCCCACTGTTGAAGCAGCACAAAGTAATCTATTTCACTCATACGGATTCTCGGATTGCCAATAATGACCTCCCAAGTTCCATCCAAAGGCTGAGGTGCCGTGTGAATTACAGGGCATTGAAGAATTCAGCTCCAATAGAAGAACTTGGAAAAACCTTGGTTTCTAGAATGCGGCAAAATGGAGGCCCTTATCTTGCTCTTCATTTGAGGTATGAGAAGGATATGCTTGCGTTTACAGGCTGCAAATGCGATATGAAGTCAGCCACAGAAATTAATGGGACAGAGAGAAGGTTGCTTGGGGGCTGCCCACTGACGCCAAGGGAGACTTCACTTTTGCTCAGAGGGCTTGGTTTTCAATCCAGTACCAGGATTTACTTGTTAGCTGGTGAAGCTTATGGGAACGGAAGTATGCAACATCTTGAGGATGAATTCCCCAACATATTTTCCCATTCCACTCTCGCTGAAGAGGAAAAGCTGAGTCCATTCAAGAATCATCAGAACATGTTGGCTGGTATAGACTATGCTGTTGCCTTACAGAGTGATGTTTTTCTTTATACATATGACGGAAACATGGCAAAAGCAGTGCAAGGTCATAGGCGCTTTGAGAACTTTAAGAAGACCATCAATCCAGAGTTTGACACTGGAAAAATCTCTTGGAACAAATTCTGTTCCAAGGTGAAAAAGCTTCACATAGACAGAGTTGGAGCTCCATATCCGAGAGAGCCTGGTGAGTTTTCGAAACCGGAGGAAAGCTTTTACGCGAATCCATATCCAGGCTGTATACGTGAAACAAGATGGAAAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0009507 GO:0009536 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

608

Amino Acids

67.88

Weight (kDa)

8.89

Isoelectric Point (pI)

46.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 242 - 540 3.1e-94 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015446)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G35570
fragaria_vesca FvH4_1g08590
malus_domestica MD02G1090100.v1.1 MD15G1216700.v1.1
prunus_persica Prupe.7G199900_v2.0.a1
pyrus_communis pycom02g07200
rosa_chinensis RchiOBHm_Chr2g0094811
rosa_laevigata RLG00000016523
rosa_multiflora Rmu_sc0006422.1_g000026 Rmu_sc0011074.1_g000001
rosa_roxburghii Rroxscaffold_2G00146850
rosa_rugosa Rorug02G0047100
rosa_samantha Rh2AG094600 Rh2BG095200 Rh2CG097000 Rh2DG094000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 734, 1005
AccB1I GGYRCC 3 cut(s) 134, 164, 1113
AccI GTMKAC 1 cut(s) 1798
AccII CGCG 2 cut(s) 346, 1778
AciI CCGC 8 cut(s) 84, 132, 144, 162, 219, 346, 747, 1189
AclWI GGATC 3 cut(s) 334, 457, 525
AcoI YGGCCR 1 cut(s) 370
AcsI RAATTY 4 cut(s) 690, 1141, 1445, 1679
AcuI CTGAAG 2 cut(s) 443, 1500
AcyI GRCGYC 4 cut(s) 5, 165, 584, 1331
AfaI GTAC 2 cut(s) 176, 1381
AfeI AGCGCT 1 cut(s) 622
AfiI CCNNNNNNNGG 4 cut(s) 239, 1104, 1383, 1790
AflIII ACRYGT 1 cut(s) 1518
AjiI CACGTC 1 cut(s) 709
AjnI CCWGG 3 cut(s) 1382, 1741, 1789
AjuI GAANNNNNNNTTGG 4 cut(s) 1327, 1359, 1654, 1686
Alw21I GWGCWC 2 cut(s) 52, 1726
Alw26I GTCTC 3 cut(s) 12, 893, 1334
AlwI GGATC 3 cut(s) 334, 457, 525
Ama87I CYCGRG 1 cut(s) 19
Aor51HI AGCGCT 1 cut(s) 622
AoxI GGCC 3 cut(s) 317, 370, 1201
ApeKI GCWGC 5 cut(s) 102, 129, 1033, 1257, 1320
ApoI RAATTY 4 cut(s) 690, 1141, 1445, 1679
ArsI GACNNNNNNTTYG 2 cut(s) 1333, 1365
AseI ATTAAT 1 cut(s) 1290
Asp700I GAANNNNTTC 1 cut(s) 1679
AspLEI GCGC 5 cut(s) 66, 83, 167, 623, 1617
AspS9I GGNCC 1 cut(s) 1202
AsuC2I CCSGG 1 cut(s) 234
AsuHPI GGTGA 4 cut(s) 248, 1415, 1705, 1757
AsuII TTCGAA 1 cut(s) 1754
AvaI CYCGRG 1 cut(s) 19
BaeI ACNNNNGTAYC 2 cut(s) 619, 652
BalI TGGCCA 1 cut(s) 372
BanI GGYRCC 3 cut(s) 134, 164, 1113
BanII GRGCYC 2 cut(s) 52, 1726
BbsI GAAGAC 2 cut(s) 719, 1640
Bbv12I GWGCWC 2 cut(s) 52, 1726
BbvCI CCTCAGC 2 cut(s) 940, 1109
BbvI GCAGC 5 cut(s) 114, 141, 1045, 1244, 1307
BccI CCATC 8 cut(s) 233, 476, 508, 542, 574, 1106, 1646, 1806
BceAI ACGGC 4 cut(s) 59, 71, 157, 1101
BciT130I CCWGG 3 cut(s) 1384, 1743, 1791
BclI TGATCA 1 cut(s) 832
BcnI CCSGG 1 cut(s) 234
BcoDI GTCTC 3 cut(s) 12, 893, 1334
BfaI CTAG 2 cut(s) 996, 1182
BfmI CTRYAG 1 cut(s) 330
BfoI RGCGCY 4 cut(s) 84, 168, 624, 1618
BglII AGATCT 2 cut(s) 206, 871
Bme1390I CCNGG 4 cut(s) 234, 1384, 1743, 1791
BmeT110I CYCGRG 1 cut(s) 19
BmgBI CACGTC 1 cut(s) 709
BmgT120I GGNCC 1 cut(s) 1202
BmiI GGNNCC 5 cut(s) 136, 166, 231, 644, 1115
BmrFI CCNGG 4 cut(s) 234, 1384, 1743, 1791
BmrI ACTGGG 1 cut(s) 856
BmuI ACTGGG 1 cut(s) 856
BpiI GAAGAC 2 cut(s) 719, 1640
BpmI CTGGAG 1 cut(s) 173
Bpu10I CCTNAGC 2 cut(s) 940, 1109
Bpu14I TTCGAA 1 cut(s) 1754
BpuEI CTTGAG 1 cut(s) 1457
BpuMI CCSGG 1 cut(s) 234
BsaAI YACGTR 1 cut(s) 1802
BsaHI GRCGYC 4 cut(s) 5, 165, 584, 1331
BsaJI CCNNGG 3 cut(s) 1173, 1334, 1689
BsaWI WCCGGW 2 cut(s) 29, 1759
BsaXI ACNNNNNCTCC 2 cut(s) 546, 576
Bsc4I CCNNNNNNNGG 4 cut(s) 239, 1104, 1383, 1790
Bse118I RCCGGY 2 cut(s) 98, 167
Bse1I ACTGG 4 cut(s) 442, 851, 1377, 1663
Bse3DI GCAATG 3 cut(s) 42, 154, 816
BseBI CCWGG 3 cut(s) 1384, 1743, 1791
BseDI CCNNGG 3 cut(s) 1173, 1334, 1689
BseGI GGATG 7 cut(s) 384, 487, 519, 553, 916, 1098, 1447
BseLI CCNNNNNNNGG 4 cut(s) 239, 1104, 1383, 1790
BseMI GCAATG 3 cut(s) 42, 154, 816
BseMII CTCAG 5 cut(s) 302, 954, 1100, 1369, 1484
BseNI ACTGG 4 cut(s) 442, 851, 1377, 1663
BseRI GAGGAG 1 cut(s) 567
BseXI GCAGC 5 cut(s) 114, 141, 1045, 1244, 1307
Bsh1236I CGCG 2 cut(s) 346, 1778
BshFI GGCC 3 cut(s) 319, 372, 1203
BshNI GGYRCC 3 cut(s) 134, 164, 1113
BsiHKAI GWGCWC 2 cut(s) 52, 1726
BsiHKCI CYCGRG 1 cut(s) 19
BsiSI CCGG 5 cut(s) 30, 99, 168, 233, 1760
BslFI GGGAC 1 cut(s) 1309
BslI CCNNNNNNNGG 4 cut(s) 239, 1104, 1383, 1790
BsmAI GTCTC 3 cut(s) 12, 893, 1334
BsmBI CGTCTC 1 cut(s) 12
BsmFI GGGAC 1 cut(s) 1309
BsmI GAATGC 1 cut(s) 1191
BsnI GGCC 3 cut(s) 319, 372, 1203
BsoBI CYCGRG 1 cut(s) 19
Bsp119I TTCGAA 1 cut(s) 1754
Bsp1286I GDGCHC 2 cut(s) 52, 1726
Bsp143I GATC 7 cut(s) 184, 206, 326, 449, 517, 832, 871
BspACI CCGC 8 cut(s) 84, 132, 144, 162, 219, 346, 747, 1189
BspANI GGCC 3 cut(s) 319, 372, 1203
BspCNI CTCAG 5 cut(s) 303, 953, 1101, 1368, 1485
BspFNI CGCG 2 cut(s) 346, 1778
BspHI TCATGA 1 cut(s) 529
BspLI GGNNCC 5 cut(s) 136, 166, 231, 644, 1115
BspMAI CTGCAG 1 cut(s) 334
BspPI GGATC 3 cut(s) 334, 457, 525
BspQI GCTCTTC 1 cut(s) 1221
BspT104I TTCGAA 1 cut(s) 1754
BspT107I GGYRCC 3 cut(s) 134, 164, 1113
BsrDI GCAATG 3 cut(s) 42, 154, 816
BsrFI RCCGGY 2 cut(s) 98, 167
BsrI ACTGG 4 cut(s) 442, 851, 1377, 1663
BssAI RCCGGY 2 cut(s) 98, 167
BssECI CCNNGG 3 cut(s) 1173, 1334, 1689
BssMI GATC 7 cut(s) 184, 206, 326, 449, 517, 832, 871
BssNAI GTATAC 1 cut(s) 1799
BssNI GRCGYC 4 cut(s) 5, 165, 584, 1331
BssT1I CCWWGG 3 cut(s) 1173, 1334, 1689
Bst1107I GTATAC 1 cut(s) 1799
Bst2UI CCWGG 3 cut(s) 1384, 1743, 1791
Bst4CI ACNGT 4 cut(s) 599, 656, 668, 1026
Bst6I CTCTTC 4 cut(s) 353, 606, 1221, 1476
BstACI GRCGYC 4 cut(s) 5, 165, 584, 1331
BstBAI YACGTR 1 cut(s) 1802
BstBI TTCGAA 1 cut(s) 1754
BstC8I GCNNGC 4 cut(s) 48, 79, 169, 1245
BstDEI CTNAG 6 cut(s) 311, 795, 940, 1109, 1355, 1493
BstF5I GGATG 7 cut(s) 384, 487, 519, 553, 916, 1098, 1447
BstFNI CGCG 2 cut(s) 346, 1778
BstH2I RGCGCY 4 cut(s) 84, 168, 624, 1618
BstHHI GCGC 5 cut(s) 66, 83, 167, 623, 1617
BstKTI GATC 7 cut(s) 187, 209, 329, 452, 520, 835, 874
BstMAI GTCTC 3 cut(s) 12, 893, 1334
BstMBI GATC 7 cut(s) 184, 206, 326, 449, 517, 832, 871
BstNI CCWGG 3 cut(s) 1384, 1743, 1791
BstNSI RCATGY 1 cut(s) 1522
BstSCI CCNGG 4 cut(s) 232, 1382, 1741, 1789
BstSFI CTRYAG 1 cut(s) 330
BstUI CGCG 2 cut(s) 346, 1778
BstV1I GCAGC 5 cut(s) 114, 141, 1045, 1244, 1307
BstV2I GAAGAC 2 cut(s) 719, 1640
BstX2I RGATCY 4 cut(s) 206, 326, 449, 871
BstYI RGATCY 4 cut(s) 206, 326, 449, 871
BstZ17I GTATAC 1 cut(s) 1799
BsuRI GGCC 3 cut(s) 319, 372, 1203
BtrI CACGTC 1 cut(s) 709
BtsCI GGATG 7 cut(s) 384, 487, 519, 553, 916, 1098, 1447
BtsI GCAGTG 2 cut(s) 339, 1605
BtsIMutI CAGTG 7 cut(s) 339, 661, 677, 1022, 1325, 1605, 1656
Cac8I GCNNGC 4 cut(s) 48, 79, 169, 1245
CciI TCATGA 1 cut(s) 529
CfoI GCGC 5 cut(s) 66, 83, 167, 623, 1617
Cfr10I RCCGGY 2 cut(s) 98, 167
Cfr13I GGNCC 1 cut(s) 1202
CseI GACGC 2 cut(s) 573, 1339
Csp6I GTAC 2 cut(s) 175, 1380
CspCI CAANNNNNGTGG 2 cut(s) 106, 141
CviAII CATG 6 cut(s) 281, 496, 530, 560, 1519, 1588
CviQI GTAC 2 cut(s) 175, 1380
DdeI CTNAG 6 cut(s) 311, 795, 940, 1109, 1355, 1493
DinI GGCGCC 1 cut(s) 166
DpnI GATC 7 cut(s) 186, 208, 328, 451, 519, 834, 873
DpnII GATC 7 cut(s) 184, 206, 326, 449, 517, 832, 871
DraI TTTAAA 2 cut(s) 507, 868
EaeI YGGCCR 1 cut(s) 370
Eam1104I CTCTTC 4 cut(s) 353, 606, 1221, 1476
EarI CTCTTC 4 cut(s) 353, 606, 1221, 1476
Ecl136II GAGCTC 2 cut(s) 50, 1724
Eco130I CCWWGG 3 cut(s) 1173, 1334, 1689
Eco24I GRGCYC 2 cut(s) 52, 1726
Eco32I GATATC 2 cut(s) 542, 916
Eco47III AGCGCT 1 cut(s) 622
Eco53kI GAGCTC 2 cut(s) 50, 1724
Eco57I CTGAAG 2 cut(s) 443, 1500
Eco88I CYCGRG 1 cut(s) 19
EcoICRI GAGCTC 2 cut(s) 50, 1724
EcoO109I RGGNCCY 1 cut(s) 1202
EcoRI GAATTC 2 cut(s) 1141, 1445
EcoRII CCWGG 3 cut(s) 1382, 1741, 1789
EcoRV GATATC 2 cut(s) 542, 916
EcoT14I CCWWGG 3 cut(s) 1173, 1334, 1689
EcoT38I GRGCYC 2 cut(s) 52, 1726
EgeI GGCGCC 1 cut(s) 166
EheI GGCGCC 1 cut(s) 166
ErhI CCWWGG 3 cut(s) 1173, 1334, 1689
Esp3I CGTCTC 1 cut(s) 12
FaeI CATG 6 cut(s) 284, 499, 533, 563, 1522, 1591
FalI AAGNNNNNCTT 2 cut(s) 1327, 1359
FaqI GGGAC 1 cut(s) 1309
FatI CATG 6 cut(s) 280, 495, 529, 559, 1518, 1587
FauI CCCGC 1 cut(s) 212
FauNDI CATATG 1 cut(s) 1576
FbaI TGATCA 1 cut(s) 832
FblI GTMKAC 1 cut(s) 1798
FokI GGATG 7 cut(s) 391, 494, 526, 560, 923, 1085, 1454
FriOI GRGCYC 2 cut(s) 52, 1726
FspBI CTAG 2 cut(s) 996, 1182
GlaI GCGC 5 cut(s) 65, 82, 166, 622, 1616
GsuI CTGGAG 1 cut(s) 173
HaeII RGCGCY 4 cut(s) 84, 168, 624, 1618
HaeIII GGCC 3 cut(s) 319, 372, 1203
HapII CCGG 5 cut(s) 30, 99, 168, 233, 1760
HgaI GACGC 2 cut(s) 573, 1339
HhaI GCGC 5 cut(s) 66, 83, 167, 623, 1617
Hin1I GRCGYC 4 cut(s) 5, 165, 584, 1331
Hin1II CATG 6 cut(s) 284, 499, 533, 563, 1522, 1591
Hin6I GCGC 5 cut(s) 64, 81, 165, 621, 1615
HinP1I GCGC 5 cut(s) 64, 81, 165, 621, 1615
HindIII AAGCTT 3 cut(s) 1407, 1700, 1768
HpaII CCGG 5 cut(s) 30, 99, 168, 233, 1760
HphI GGTGA 4 cut(s) 248, 1415, 1705, 1757
Hpy166II GTNNAC 4 cut(s) 340, 595, 1251, 1799
Hpy188III TCNNGA 6 cut(s) 530, 545, 1182, 1436, 1504, 1646
Hpy8I GTNNAC 4 cut(s) 340, 595, 1251, 1799
Hpy99I CGWCG 1 cut(s) 92
HpyAV CCTTC 5 cut(s) 309, 799, 834, 1228, 1299
HpyCH4III ACNGT 4 cut(s) 599, 656, 668, 1026
HpyCH4IV ACGT 3 cut(s) 470, 708, 1801
HpyCH4V TGCA 7 cut(s) 35, 332, 434, 675, 1260, 1429, 1603
HpyF3I CTNAG 6 cut(s) 311, 795, 940, 1109, 1355, 1493
HpySE526I ACGT 3 cut(s) 470, 708, 1801
Hsp92I GRCGYC 4 cut(s) 5, 165, 584, 1331
Hsp92II CATG 6 cut(s) 284, 499, 533, 563, 1522, 1591
HspAI GCGC 5 cut(s) 64, 81, 165, 621, 1615
KasI GGCGCC 1 cut(s) 164
KroI GCCGGC 1 cut(s) 167
KroNI GCCGGC 1 cut(s) 169
Ksp22I TGATCA 1 cut(s) 832
Kzo9I GATC 7 cut(s) 184, 206, 326, 449, 517, 832, 871
LguI GCTCTTC 1 cut(s) 1221
LmnI GCTCC 3 cut(s) 1153, 1721, 1729
Lsp1109I GCAGC 5 cut(s) 114, 141, 1045, 1244, 1307
MaeI CTAG 2 cut(s) 996, 1182
MaeII ACGT 3 cut(s) 470, 708, 1801
MaeIII GTNAC 1 cut(s) 722
MalI GATC 7 cut(s) 186, 208, 328, 451, 519, 834, 873
MboI GATC 7 cut(s) 184, 206, 326, 449, 517, 832, 871
MboII GAAGA 9 cut(s) 370, 436, 623, 724, 1150, 1169, 1208, 1493, 1645
MfeI CAATTG 1 cut(s) 321
MflI RGATCY 4 cut(s) 206, 326, 449, 871
MhlI GDGCHC 2 cut(s) 52, 1726
MlsI TGGCCA 1 cut(s) 372
MluCI AATT 9 cut(s) 321, 661, 690, 954, 1123, 1141, 1287, 1445, 1679
MluNI TGGCCA 1 cut(s) 372
Mly113I GGCGCC 1 cut(s) 165
MlyI GAGTC 5 cut(s) 242, 335, 485, 895, 1504
MmeI TCCRAC 2 cut(s) 670, 1699
Mox20I TGGCCA 1 cut(s) 372
MreI CGCCGGCG 1 cut(s) 167
MroNI GCCGGC 1 cut(s) 167
MroXI GAANNNNTTC 1 cut(s) 1679
MscI TGGCCA 1 cut(s) 372
MseI TTAA 4 cut(s) 506, 867, 1290, 1629
MslI CAYNNNNRTG 2 cut(s) 279, 534
Msp20I TGGCCA 1 cut(s) 372
MspA1I CMGCKG 2 cut(s) 132, 193
MspI CCGG 5 cut(s) 30, 99, 168, 233, 1760
MspR9I CCNGG 4 cut(s) 234, 1384, 1743, 1791
MunI CAATTG 1 cut(s) 321
Mva1269I GAATGC 1 cut(s) 1191
MvaI CCWGG 3 cut(s) 1384, 1743, 1791
MvnI CGCG 2 cut(s) 346, 1778
NaeI GCCGGC 1 cut(s) 169
NarI GGCGCC 1 cut(s) 165
NciI CCSGG 1 cut(s) 234
NdeI CATATG 1 cut(s) 1576
NdeII GATC 7 cut(s) 184, 206, 326, 449, 517, 832, 871
NgoMIV GCCGGC 1 cut(s) 167
NlaIII CATG 6 cut(s) 284, 499, 533, 563, 1522, 1591
NlaIV GGNNCC 5 cut(s) 136, 166, 231, 644, 1115
NspI RCATGY 1 cut(s) 1522
NspV TTCGAA 1 cut(s) 1754
PagI TCATGA 1 cut(s) 529
PciI ACATGT 1 cut(s) 1518
PciSI GCTCTTC 1 cut(s) 1221
PctI GAATGC 1 cut(s) 1191
PdiI GCCGGC 1 cut(s) 169
PdmI GAANNNNTTC 1 cut(s) 1679
PfeI GAWTC 6 cut(s) 24, 418, 754, 1064, 1507, 1780
PleI GAGTC 5 cut(s) 242, 335, 485, 895, 1503
PluTI GGCGCC 1 cut(s) 168
PpsI GAGTC 5 cut(s) 242, 335, 485, 895, 1503
Ppu21I YACGTR 1 cut(s) 1802
PscI ACATGT 1 cut(s) 1518
PshBI ATTAAT 1 cut(s) 1290
PsiI TTATAA 2 cut(s) 734, 1005
Psp124BI GAGCTC 2 cut(s) 52, 1726
Psp6I CCWGG 3 cut(s) 1382, 1741, 1789
PspGI CCWGG 3 cut(s) 1382, 1741, 1789
PspN4I GGNNCC 5 cut(s) 136, 166, 231, 644, 1115
PspPI GGNCC 1 cut(s) 1202
PstI CTGCAG 1 cut(s) 334
PsuI RGATCY 4 cut(s) 206, 326, 449, 871
PvuII CAGCTG 1 cut(s) 193
RsaI GTAC 2 cut(s) 176, 1381
RsaNI GTAC 2 cut(s) 175, 1380
RseI CAYNNNNRTG 2 cut(s) 279, 534
SacI GAGCTC 2 cut(s) 52, 1726
SapI GCTCTTC 1 cut(s) 1221
SaqAI TTAA 4 cut(s) 506, 867, 1290, 1629
Sau3AI GATC 7 cut(s) 184, 206, 326, 449, 517, 832, 871
Sau96I GGNCC 1 cut(s) 1202
SchI GAGTC 5 cut(s) 242, 335, 485, 895, 1504
ScrFI CCNGG 4 cut(s) 234, 1384, 1743, 1791
SduI GDGCHC 2 cut(s) 52, 1726
SfcI CTRYAG 1 cut(s) 330
SfoI GGCGCC 1 cut(s) 166
SfuI TTCGAA 1 cut(s) 1754
SgrAI CRCCGGYG 1 cut(s) 167
SmiMI CAYNNNNRTG 2 cut(s) 279, 534
SmlI CTYRAG 1 cut(s) 1436
SmoI CTYRAG 1 cut(s) 1436
Sse9I AATT 9 cut(s) 321, 661, 690, 954, 1123, 1141, 1287, 1445, 1679
SsiI CCGC 8 cut(s) 84, 132, 144, 162, 219, 346, 747, 1189
SspDI GGCGCC 1 cut(s) 164
SspI AATATT 1 cut(s) 502
SspMI CTAG 2 cut(s) 996, 1182
SstI GAGCTC 2 cut(s) 52, 1726
StyD4I CCNGG 4 cut(s) 232, 1382, 1741, 1789
StyI CCWWGG 3 cut(s) 1173, 1334, 1689
TaaI ACNGT 4 cut(s) 599, 656, 668, 1026
TaiI ACGT 3 cut(s) 473, 711, 1804
TaqI TCGA 1 cut(s) 1754
TasI AATT 9 cut(s) 321, 661, 690, 954, 1123, 1141, 1287, 1445, 1679
TauI GCSGC 6 cut(s) 86, 135, 147, 165, 750, 1192
TfiI GAWTC 6 cut(s) 24, 418, 754, 1064, 1507, 1780
Tru1I TTAA 4 cut(s) 506, 867, 1290, 1629
Tru9I TTAA 4 cut(s) 506, 867, 1290, 1629
TscAI CASTG 7 cut(s) 339, 661, 677, 1029, 1332, 1605, 1663
TseI GCWGC 5 cut(s) 102, 129, 1033, 1257, 1320
TspDTI ATGAA 7 cut(s) 512, 546, 818, 883, 1208, 1286, 1458
TspGWI ACGGA 6 cut(s) 135, 526, 923, 1076, 1434, 1596
TspRI CASTG 7 cut(s) 339, 661, 677, 1029, 1332, 1605, 1663
VspI ATTAAT 1 cut(s) 1290
XapI RAATTY 4 cut(s) 690, 1141, 1445, 1679
XbaI TCTAGA 1 cut(s) 1181
XceI RCATGY 1 cut(s) 1522
XmiI GTMKAC 1 cut(s) 1798
XmnI GAANNNNTTC 1 cut(s) 1679
XspI CTAG 2 cut(s) 996, 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.