Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0015059

Physical Location & Seq

Genomic Coordinates Forward (+)

19637827 .. 19640293

Gene Structure 2467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1238200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGAACGACACTCTCTCTCCTCCGCCGTCGCCCGGCGACGGCGCCGATACCTACGAGGCCTGGTACGGGAACATACAGTACCTTCTCAACATCTCCGCCATCGGCTCCTTCTTCTGTGTCTTCTTCTTCATCTTCGTCAAGCTCCGCAGCGACCACCGCCGCATGCCCGGCCCGTCCGCACTCGTCGCCAAGCTCCTCGCTGTGTGGCACGCTACCTGTCGAGAGATTGCGCGCCACTGCGGCGCTGACGCCGCCCAATTTCTCTTGATCGAGGGTGGAAGCTGCGGGTTGCTGTTGTCGATGGCGGTTTTGGCTGTGCTTGTGATGCTTCCGCTGAATCTCTACGCCGGGAGTGCTGTGCTCGGGGATCAGTTTTCAAAGACGACCATCATTCACATCGAGAGAGGTTCGGCTTTGCTTTGGGTGCATTTCGTTTTCGTGGTTGTTGTTGTTGTTTTGGTGCATTTTAGTATTTCTGCCATTGAAGGGAGATTGAGAATCACTAGGATTAGGGATGGAAATGGCAATTTGAGTGACCCAACCGTGAATTCCACGGCTATTTTTACTATAATGGTGCAGGGGATACCGAAAACTATAGGTAATGATAGGACTGTGTTGCATGAGTATTTTCAACATAGGTATCCAGGCAAGGTCTATAGGGTTATAATGCCGATGGATTTGTGTGCGTTGGATGAATTAGCCTCGGAATTAGTGAGGGTTAGGCATGAAATTTCTTGGTTGGTTGCACGAATTGACTCCCGGCTCTTGCCGTTTGAAAGTGAAGAGGATGGATATGTAAGGACTTCTTCAGAGGGGGTATGGGGCTGTGCTTGTAATTTATGGCATAAGGTGGAAGATTTCTGGTATAATACTCTGGCTAGGTTGGGATACACTGATGAAAGGAAGTTAGGAGAGTTGCAGGGATTGAGAGCTGAATTGGAGACTGAACTAGCTGCTTACAAAGAAGGTCATGCACTGGGTGCTGGAGTTGCGTTTGTGGTGTTTAAGGATGTATACACTGCAAATAAAGCTGTTCAGGACTTTCAACATGAGAAGAAGAAGCGGATAGGGAAGTTTTTTTCTCTTGTGGAATTGCGTTTACAGAGAAACCAATGGAAAGTAGAGCAGGCACCCTTGGCCACAGATATTTATTGGAATCATTTGGGGTCTTCAAAGCTCTCACTGAAATTACGAAGAGTGTTGGTGAACACGTGCTTGCTGTTGATTCTTCTGTTCTTTAGCTCTCCTCTGGCAATTATCAGTGCTCTAAAAAATGCCTGGCGGATTATAAATGCAGAAGCTATGGATAATGCCCAGTTGTGGTTTGCTTGGGTGCAGAGCTCAAGCTGGCTCGGGAGTCTTATCTTTCAGTTTCTACCCAATGTGTTTATTTTTGTCAGCATGTATATAGTTATTCCATCAGCACTTTCATATCTCTCCAAGTTCGAGCGACACCTTACAGTGTCAGGGGAGCAAAGAGCTGCTCTTCTTAAGATGGTTTGTTTCTTCCTGGTGAATCTTATACTTCTTAAGGGACTGGTTGAATCATCTTTAGAGAGTGCCATCTTAAAAATGGGAAGGTGCTATTTGGATGGAGAAGATTGCAAGAGAATTGAGCAGTACATGAGTGCCTCGTTTTTGTCAAGATCATGTCTTTCCTCTCTTGCATTCTTGATAACGAGTACATTCCTGGGTATATCTTATGATCTATTGGCTCCAATCCCTTGGATAAAAAGGAAGATTCAGAAGTTTCGAAAGAATGACATGCTACAGCTGGTCCCGGAACAAAGTGAAGAATATGCATTGGAAACTCAGGAAACCGATAGTCTAGAAAGGCCCTTGATTGTGGACACCACTAACGATTCTCCCAGATCGTATGGAATTTATCTGCAGGGAAATGATCTTTCTGATTACCCAATCAACAGAACATCAACAGCCCCAAAACAGACATTCGATTTTGCCCAATATTATGCCTTTAATTTGACGATATTCGCCCTAACCTTTATATATTCTTCCTTCTCTCCGCTTGTGGTTCCCGTCGGTGCTATTTATTTTGGGTATAGGTACGTGGTCGATAAGTACAACTTCCTCTTTGTCTATAGGGTCCGTGGCTTTCCTGCTGGGAATGATGGGAAGTTGATGGATACAGTATTGTGCATCATGCGTTTTTGTGTCGATCTGTTCCTTCTTGCAATGCTGCTGTTCTTTTCGGTCCATGGAGACTCAACGAAGCTGCAAGCTATATTTACACTTGGGGTACTAGTAATGTATAAATTGCTGCCTTCCCAGAATGATAGTCTTCATCCAGCTCTCTTGGAAGGCATACAAACTGTAGACACTGTTGTTGATGGGCCTATTGACTATGAGGTGTATTCACAGCCCAGATTTGACTGGGATACATATTATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0015031 GO:0015833 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

804

Amino Acids

90.96

Weight (kDa)

6.49

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RSN1_TM	PF13967	51 - 158	1.5e-10	Late exocytosis, associated with Golgi transport
PHM7_cyt	PF14703	188 - 387	2.7e-11	Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM	PF02714	398 - 583	7.9e-11	Calcium-dependent channel, 7TM region, putative phosphate
RSN1_7TM	PF02714	648 - 736	3.9e-12	Calcium-dependent channel, 7TM region, putative phosphate

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015059)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35870
fragaria_vesca	FvH4_1g11170
malus_domestica	MD02G1124200.v1.1 MD15G1238200.v1.1
prunus_persica	Prupe.7G174200_v2.0.a1
pyrus_communis	pycom02g09710 pycom05g15420 pycom15g21190
rosa_chinensis	RchiOBHm_Chr2g0098461
rosa_laevigata	RLG00000016800
rosa_multiflora	Rmu_sc0010938.1_g000006
rosa_roxburghii	Rroxscaffold_2G00143940
rosa_rugosa	Rorug02G0073400
rosa_samantha	Rh2AG120700 Rh2DG125700
rosa_wichuraiana	Rw2G009460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	665, 1289
AccB1I	GGYRCC	2 cut(s)	41, 1129
AccI	GTMKAC	2 cut(s)	1014, 2334
AccII	CGCG	1 cut(s)	232
AclWI	GGATC	1 cut(s)	375
AcoI	YGGCCR	1 cut(s)	1137
AcsI	RAATTY	3 cut(s)	547, 729, 1881
AcuI	CTGAAG	1 cut(s)	792
AcvI	CACGTG	1 cut(s)	1212
AcyI	GRCGYC	2 cut(s)	42, 249
AdeI	CACNNNGTG	1 cut(s)	980
AfaI	GTAC	7 cut(s)	65, 80, 1622, 1684, 2066, 2081, 2259
AfiI	CCNNNNNNNGG	5 cut(s)	32, 38, 66, 486, 1320
AflII	CTTAAG	2 cut(s)	1490, 1529
AflIII	ACRYGT	1 cut(s)	1209
AgsI	TTSAA	7 cut(s)	378, 485, 632, 776, 1046, 1173, 1544
AhlI	ACTAGT	1 cut(s)	2260
AjnI	CCWGG	5 cut(s)	59, 643, 1277, 1509, 1689
AjuI	GAANNNNNNNTTGG	2 cut(s)	532, 564
Alw21I	GWGCWC	3 cut(s)	363, 1267, 1343
Alw26I	GTCTC	2 cut(s)	935, 2214
AlwI	GGATC	1 cut(s)	375
Ama87I	CYCGRG	2 cut(s)	362, 1352
AoxI	GGCC	5 cut(s)	57, 169, 1137, 1835, 2351
ApeKI	GCWGC	7 cut(s)	147, 282, 953, 1481, 2197, 2233, 2278
ApoI	RAATTY	3 cut(s)	547, 729, 1881
AspLEI	GCGC	4 cut(s)	44, 232, 234, 245
AspS9I	GGNCC	6 cut(s)	170, 1777, 1836, 2104, 2212, 2351
AsuC2I	CCSGG	5 cut(s)	33, 168, 349, 760, 1781
AsuHPI	GGTGA	2 cut(s)	1216, 1525
AsuII	TTCGAA	1 cut(s)	1753
AvaI	CYCGRG	2 cut(s)	362, 1352
AvaII	GGWCC	3 cut(s)	1777, 2104, 2212
BaeI	ACNNNNGTAYC	2 cut(s)	623, 656
BalI	TGGCCA	1 cut(s)	1139
BanI	GGYRCC	2 cut(s)	41, 1129
BanII	GRGCYC	1 cut(s)	1343
BbrPI	CACGTG	1 cut(s)	1212
BbsI	GAAGAC	3 cut(s)	112, 1161, 2291
Bbv12I	GWGCWC	3 cut(s)	363, 1267, 1343
BbvI	GCAGC	7 cut(s)	159, 269, 940, 1468, 2184, 2220, 2265
BceAI	ACGGC	4 cut(s)	10, 55, 570, 754
BciT130I	CCWGG	5 cut(s)	61, 645, 1279, 1511, 1691
BciVI	GTATCC	5 cut(s)	576, 651, 881, 2137, 2389
BcnI	CCSGG	5 cut(s)	33, 168, 349, 760, 1781
BcoDI	GTCTC	2 cut(s)	935, 2214
BcuI	ACTAGT	1 cut(s)	2260
BfaI	CTAG	5 cut(s)	504, 879, 950, 1829, 2261
BfmI	CTRYAG	6 cut(s)	594, 655, 1769, 1889, 2098, 2331
BfoI	RGCGCY	2 cut(s)	45, 246
BfrI	CTTAAG	2 cut(s)	1490, 1529
BfuI	GTATCC	5 cut(s)	576, 651, 881, 2137, 2389
BglI	GCCNNNNNGGC	1 cut(s)	240
Bme18I	GGWCC	3 cut(s)	1777, 2104, 2212
BmeT110I	CYCGRG	2 cut(s)	362, 1352
BmgT120I	GGNCC	6 cut(s)	170, 1777, 1836, 2104, 2212, 2351
BmiI	GGNNCC	7 cut(s)	43, 106, 1131, 1716, 1779, 2034, 2105
BmrI	ACTGGG	3 cut(s)	986, 1309, 2401
BmsI	GCATC	2 cut(s)	315, 2166
BmuI	ACTGGG	3 cut(s)	986, 1309, 2401
BpiI	GAAGAC	3 cut(s)	112, 1161, 2291
BpmI	CTGGAG	1 cut(s)	1005
Bpu14I	TTCGAA	1 cut(s)	1753
BpuEI	CTTGAG	1 cut(s)	1327
BpuMI	CCSGG	5 cut(s)	33, 168, 349, 760, 1781
BsaAI	YACGTR	2 cut(s)	1212, 2068
BsaHI	GRCGYC	2 cut(s)	42, 249
BsaJI	CCNNGG	7 cut(s)	552, 702, 1134, 1690, 1724, 2107, 2215
BsaXI	ACNNNNNCTCC	1 cut(s)	31
Bsc4I	CCNNNNNNNGG	5 cut(s)	32, 38, 66, 486, 1320
Bse1I	ACTGG	4 cut(s)	981, 1315, 1542, 2396
Bse3DI	GCAATG	1 cut(s)	2199
BseBI	CCWGG	5 cut(s)	61, 645, 1279, 1511, 1691
BseDI	CCNNGG	7 cut(s)	552, 702, 1134, 1690, 1724, 2107, 2215
BseGI	GGATG	6 cut(s)	520, 697, 793, 1015, 1597, 2302
BseLI	CCNNNNNNNGG	5 cut(s)	32, 38, 66, 486, 1320
BseMI	GCAATG	1 cut(s)	2199
BseMII	CTCAG	1 cut(s)	1826
BseNI	ACTGG	4 cut(s)	981, 1315, 1542, 2396
BsePI	GCGCGC	1 cut(s)	230
BseRI	GAGGAG	3 cut(s)	9, 185, 1236
BseXI	GCAGC	7 cut(s)	159, 269, 940, 1468, 2184, 2220, 2265
BseYI	CCCAGC	1 cut(s)	2120
BsgI	GTGCAG	2 cut(s)	596, 1355
Bsh1236I	CGCG	1 cut(s)	232
BshFI	GGCC	5 cut(s)	59, 171, 1139, 1837, 2353
BshNI	GGYRCC	2 cut(s)	41, 1129
BsiHKAI	GWGCWC	3 cut(s)	363, 1267, 1343
BsiHKCI	CYCGRG	2 cut(s)	362, 1352
BsiSI	CCGG	5 cut(s)	33, 168, 348, 760, 1781
BslFI	GGGAC	2 cut(s)	1548, 1763
BslI	CCNNNNNNNGG	5 cut(s)	32, 38, 66, 486, 1320
BsmAI	GTCTC	2 cut(s)	935, 2214
BsmFI	GGGAC	2 cut(s)	1548, 1763
BsmI	GAATGC	1 cut(s)	1667
BsnI	GGCC	5 cut(s)	59, 171, 1139, 1837, 2353
BsoBI	CYCGRG	2 cut(s)	362, 1352
Bsp119I	TTCGAA	1 cut(s)	1753
Bsp1286I	GDGCHC	3 cut(s)	363, 1267, 1343
Bsp143I	GATC	7 cut(s)	267, 367, 1646, 1705, 1871, 1900, 2176
Bsp19I	CCATGG	1 cut(s)	2215
BspANI	GGCC	5 cut(s)	59, 171, 1139, 1837, 2353
BspCNI	CTCAG	1 cut(s)	1825
BspFNI	CGCG	1 cut(s)	232
BspHI	TCATGA	1 cut(s)	2408
BspLI	GGNNCC	7 cut(s)	43, 106, 1131, 1716, 1779, 2034, 2105
BspMAI	CTGCAG	1 cut(s)	1893
BspPI	GGATC	1 cut(s)	375
BspQI	GCTCTTC	1 cut(s)	1491
BspT104I	TTCGAA	1 cut(s)	1753
BspT107I	GGYRCC	2 cut(s)	41, 1129
BspTI	CTTAAG	2 cut(s)	1490, 1529
BsrDI	GCAATG	1 cut(s)	2199
BsrI	ACTGG	4 cut(s)	981, 1315, 1542, 2396
BssECI	CCNNGG	7 cut(s)	552, 702, 1134, 1690, 1724, 2107, 2215
BssHII	GCGCGC	1 cut(s)	230
BssMI	GATC	7 cut(s)	267, 367, 1646, 1705, 1871, 1900, 2176
BssNAI	GTATAC	1 cut(s)	1015
BssNI	GRCGYC	2 cut(s)	42, 249
BssT1I	CCWWGG	3 cut(s)	1134, 1724, 2215
Bst1107I	GTATAC	1 cut(s)	1015
Bst2UI	CCWGG	5 cut(s)	61, 645, 1279, 1511, 1691
Bst4CI	ACNGT	7 cut(s)	78, 544, 613, 1462, 2149, 2332, 2341
Bst6I	CTCTTC	3 cut(s)	777, 1189, 1491
BstACI	GRCGYC	2 cut(s)	42, 249
BstAFI	CTTAAG	2 cut(s)	1490, 1529
BstAPI	GCANNNNNTGC	1 cut(s)	980
BstBAI	YACGTR	2 cut(s)	1212, 2068
BstBI	TTCGAA	1 cut(s)	1753
BstC8I	GCNNGC	7 cut(s)	164, 210, 232, 1128, 1217, 1349, 2238
BstDEI	CTNAG	1 cut(s)	1812
BstDSI	CCRYGG	3 cut(s)	552, 2107, 2215
BstF5I	GGATG	6 cut(s)	520, 697, 793, 1015, 1597, 2302
BstFNI	CGCG	1 cut(s)	232
BstH2I	RGCGCY	2 cut(s)	45, 246
BstHHI	GCGC	4 cut(s)	44, 232, 234, 245
BstKTI	GATC	7 cut(s)	270, 370, 1649, 1708, 1874, 1903, 2179
BstMAI	GTCTC	2 cut(s)	935, 2214
BstMBI	GATC	7 cut(s)	267, 367, 1646, 1705, 1871, 1900, 2176
BstNI	CCWGG	5 cut(s)	61, 645, 1279, 1511, 1691
BstNSI	RCATGY	3 cut(s)	166, 1405, 1768
BstSFI	CTRYAG	6 cut(s)	594, 655, 1769, 1889, 2098, 2331
BstUI	CGCG	1 cut(s)	232
BstV1I	GCAGC	7 cut(s)	159, 269, 940, 1468, 2184, 2220, 2265
BstV2I	GAAGAC	3 cut(s)	112, 1161, 2291
BstXI	CCANNNNNNTGG	1 cut(s)	1725
BstZ17I	GTATAC	1 cut(s)	1015
BsuI	GTATCC	5 cut(s)	576, 651, 881, 2137, 2389
BsuRI	GGCC	5 cut(s)	59, 171, 1139, 1837, 2353
BtgI	CCRYGG	3 cut(s)	552, 2107, 2215
BtsCI	GGATG	6 cut(s)	520, 697, 793, 1015, 1597, 2302
BtsI	GCAGTG	2 cut(s)	235, 1017
BtsIMutI	CAGTG	8 cut(s)	235, 891, 974, 1017, 1181, 1267, 1467, 2337
Cac8I	GCNNGC	7 cut(s)	164, 210, 232, 1128, 1217, 1349, 2238
CciI	TCATGA	1 cut(s)	2408
CfoI	GCGC	4 cut(s)	44, 232, 234, 245
Cfr13I	GGNCC	6 cut(s)	170, 1777, 1836, 2104, 2212, 2351
CseI	GACGC	1 cut(s)	257
Csp6I	GTAC	7 cut(s)	64, 79, 1621, 1683, 2065, 2080, 2258
CviQI	GTAC	7 cut(s)	64, 79, 1621, 1683, 2065, 2080, 2258
DdeI	CTNAG	1 cut(s)	1812
DinI	GGCGCC	1 cut(s)	43
DpnI	GATC	7 cut(s)	269, 369, 1648, 1707, 1873, 1902, 2178
DpnII	GATC	7 cut(s)	267, 367, 1646, 1705, 1871, 1900, 2176
DraIII	CACNNNGTG	1 cut(s)	980
EaeI	YGGCCR	1 cut(s)	1137
Eam1104I	CTCTTC	3 cut(s)	777, 1189, 1491
EarI	CTCTTC	3 cut(s)	777, 1189, 1491
EciI	GGCGGA	3 cut(s)	12, 85, 1297
Ecl136II	GAGCTC	1 cut(s)	1341
Eco130I	CCWWGG	3 cut(s)	1134, 1724, 2215
Eco147I	AGGCCT	1 cut(s)	59
Eco24I	GRGCYC	1 cut(s)	1343
Eco47I	GGWCC	3 cut(s)	1777, 2104, 2212
Eco53kI	GAGCTC	1 cut(s)	1341
Eco57I	CTGAAG	1 cut(s)	792
Eco72I	CACGTG	1 cut(s)	1212
Eco88I	CYCGRG	2 cut(s)	362, 1352
EcoICRI	GAGCTC	1 cut(s)	1341
EcoO109I	RGGNCCY	1 cut(s)	1836
EcoRI	GAATTC	1 cut(s)	547
EcoRII	CCWGG	5 cut(s)	59, 643, 1277, 1509, 1689
EcoT14I	CCWWGG	3 cut(s)	1134, 1724, 2215
EcoT22I	ATGCAT	1 cut(s)	1804
EcoT38I	GRGCYC	1 cut(s)	1343
EgeI	GGCGCC	1 cut(s)	43
EheI	GGCGCC	1 cut(s)	43
ErhI	CCWWGG	3 cut(s)	1134, 1724, 2215
FalI	AAGNNNNNCTT	4 cut(s)	790, 822, 2069, 2101
FaqI	GGGAC	2 cut(s)	1548, 1763
FauI	CCCGC	1 cut(s)	278
FblI	GTMKAC	2 cut(s)	1014, 2334
FokI	GGATG	6 cut(s)	527, 704, 800, 1022, 1604, 2289
FriOI	GRGCYC	1 cut(s)	1343
FspBI	CTAG	5 cut(s)	504, 879, 950, 1829, 2261
GlaI	GCGC	4 cut(s)	43, 231, 233, 244
GsaI	CCCAGC	1 cut(s)	2124
GsuI	CTGGAG	1 cut(s)	1005
HaeII	RGCGCY	2 cut(s)	45, 246
HaeIII	GGCC	5 cut(s)	59, 171, 1139, 1837, 2353
HapII	CCGG	5 cut(s)	33, 168, 348, 760, 1781
HgaI	GACGC	1 cut(s)	257
HhaI	GCGC	4 cut(s)	44, 232, 234, 245
Hin1I	GRCGYC	2 cut(s)	42, 249
Hin6I	GCGC	4 cut(s)	42, 230, 232, 243
HinP1I	GCGC	4 cut(s)	42, 230, 232, 243
HpaII	CCGG	5 cut(s)	33, 168, 348, 760, 1781
HphI	GGTGA	2 cut(s)	1216, 1525
Hpy166II	GTNNAC	5 cut(s)	1015, 1100, 1207, 1849, 2335
Hpy188I	TCNGA	4 cut(s)	706, 811, 1746, 1909
Hpy8I	GTNNAC	5 cut(s)	1015, 1100, 1207, 1849, 2335
Hpy99I	CGWCG	4 cut(s)	31, 41, 188, 2042
HpyAV	CCTTC	9 cut(s)	92, 118, 479, 959, 1572, 2026, 2195, 2292, 2312
HpyCH4III	ACNGT	7 cut(s)	78, 544, 613, 1462, 2149, 2332, 2341
HpyCH4IV	ACGT	2 cut(s)	1211, 2067
HpyF3I	CTNAG	1 cut(s)	1812
HpySE526I	ACGT	2 cut(s)	1211, 2067
Hsp92I	GRCGYC	2 cut(s)	42, 249
HspAI	GCGC	4 cut(s)	42, 230, 232, 243
KasI	GGCGCC	1 cut(s)	41
Kzo9I	GATC	7 cut(s)	267, 367, 1646, 1705, 1871, 1900, 2176
LguI	GCTCTTC	1 cut(s)	1491
LmnI	GCTCC	5 cut(s)	110, 147, 198, 1471, 1720
Lsp1109I	GCAGC	7 cut(s)	159, 269, 940, 1468, 2184, 2220, 2265
LweI	GCATC	2 cut(s)	315, 2166
MaeI	CTAG	5 cut(s)	504, 879, 950, 1829, 2261
MaeII	ACGT	2 cut(s)	1211, 2067
MaeIII	GTNAC	1 cut(s)	533
MalI	GATC	7 cut(s)	269, 369, 1648, 1707, 1873, 1902, 2178
MboI	GATC	7 cut(s)	267, 367, 1646, 1705, 1871, 1900, 2176
MhlI	GDGCHC	3 cut(s)	363, 1267, 1343
MlsI	TGGCCA	1 cut(s)	1139
MluNI	TGGCCA	1 cut(s)	1139
Mly113I	GGCGCC	1 cut(s)	42
MlyI	GAGTC	3 cut(s)	749, 1366, 2216
MmeI	TCCRAC	1 cut(s)	669
Mox20I	TGGCCA	1 cut(s)	1139
Mph1103I	ATGCAT	1 cut(s)	1804
MscI	TGGCCA	1 cut(s)	1139
MseI	TTAA	5 cut(s)	1005, 1491, 1530, 1568, 1977
Msp20I	TGGCCA	1 cut(s)	1139
MspA1I	CMGCKG	2 cut(s)	334, 1774
MspCI	CTTAAG	2 cut(s)	1490, 1529
MspI	CCGG	5 cut(s)	33, 168, 348, 760, 1781
Mva1269I	GAATGC	1 cut(s)	1667
MvaI	CCWGG	5 cut(s)	61, 645, 1279, 1511, 1691
MvnI	CGCG	1 cut(s)	232
NarI	GGCGCC	1 cut(s)	42
NciI	CCSGG	5 cut(s)	33, 168, 349, 760, 1781
NcoI	CCATGG	1 cut(s)	2215
NdeII	GATC	7 cut(s)	267, 367, 1646, 1705, 1871, 1900, 2176
NlaIV	GGNNCC	7 cut(s)	43, 106, 1131, 1716, 1779, 2034, 2105
NmuCI	GTSAC	1 cut(s)	533
NsiI	ATGCAT	1 cut(s)	1804
NspI	RCATGY	3 cut(s)	166, 1405, 1768
NspV	TTCGAA	1 cut(s)	1753
PaeI	GCATGC	1 cut(s)	166
PagI	TCATGA	1 cut(s)	2408
PauI	GCGCGC	1 cut(s)	230
PceI	AGGCCT	1 cut(s)	59
PciSI	GCTCTTC	1 cut(s)	1491
PctI	GAATGC	1 cut(s)	1667
PfeI	GAWTC	8 cut(s)	337, 498, 1156, 1225, 1516, 1544, 1741, 1862
PfoI	TCCNGGA	1 cut(s)	1779
PleI	GAGTC	3 cut(s)	749, 1365, 2216
PluTI	GGCGCC	1 cut(s)	45
PmaCI	CACGTG	1 cut(s)	1212
PmlI	CACGTG	1 cut(s)	1212
PpsI	GAGTC	3 cut(s)	749, 1365, 2216
Ppu21I	YACGTR	2 cut(s)	1212, 2068
PsiI	TTATAA	2 cut(s)	665, 1289
Psp124BI	GAGCTC	1 cut(s)	1343
Psp6I	CCWGG	5 cut(s)	59, 643, 1277, 1509, 1689
PspCI	CACGTG	1 cut(s)	1212
PspFI	CCCAGC	1 cut(s)	2120
PspGI	CCWGG	5 cut(s)	59, 643, 1277, 1509, 1689
PspN4I	GGNNCC	7 cut(s)	43, 106, 1131, 1716, 1779, 2034, 2105
PspPI	GGNCC	6 cut(s)	170, 1777, 1836, 2104, 2212, 2351
PsrI	GAACNNNNNNTAC	2 cut(s)	62, 94
PstI	CTGCAG	1 cut(s)	1893
PteI	GCGCGC	1 cut(s)	230
PvuII	CAGCTG	1 cut(s)	1774
RsaI	GTAC	7 cut(s)	65, 80, 1622, 1684, 2066, 2081, 2259
RsaNI	GTAC	7 cut(s)	64, 79, 1621, 1683, 2065, 2080, 2258
SacI	GAGCTC	1 cut(s)	1343
SapI	GCTCTTC	1 cut(s)	1491
SaqAI	TTAA	5 cut(s)	1005, 1491, 1530, 1568, 1977
Sau3AI	GATC	7 cut(s)	267, 367, 1646, 1705, 1871, 1900, 2176
Sau96I	GGNCC	6 cut(s)	170, 1777, 1836, 2104, 2212, 2351
SchI	GAGTC	3 cut(s)	749, 1366, 2216
SduI	GDGCHC	3 cut(s)	363, 1267, 1343
SfaNI	GCATC	2 cut(s)	315, 2166
SfcI	CTRYAG	6 cut(s)	594, 655, 1769, 1889, 2098, 2331
SfoI	GGCGCC	1 cut(s)	43
SfuI	TTCGAA	1 cut(s)	1753
SinI	GGWCC	3 cut(s)	1777, 2104, 2212
SmlI	CTYRAG	3 cut(s)	1342, 1490, 1529
SmoI	CTYRAG	3 cut(s)	1342, 1490, 1529
SpeI	ACTAGT	1 cut(s)	2260
SphI	GCATGC	1 cut(s)	166
SseBI	AGGCCT	1 cut(s)	59
SspDI	GGCGCC	1 cut(s)	41
SspI	AATATT	1 cut(s)	1967
SspMI	CTAG	5 cut(s)	504, 879, 950, 1829, 2261
SstI	GAGCTC	1 cut(s)	1343
StuI	AGGCCT	1 cut(s)	59
StyI	CCWWGG	3 cut(s)	1134, 1724, 2215
TaaI	ACNGT	7 cut(s)	78, 544, 613, 1462, 2149, 2332, 2341
TaiI	ACGT	2 cut(s)	1214, 2070
TaqI	TCGA	9 cut(s)	220, 270, 299, 399, 1446, 1753, 1953, 2073, 2175
TaqII	GACCGA	1 cut(s)	2200
TatI	WGTACW	3 cut(s)	1620, 1682, 2079
TauI	GCSGC	3 cut(s)	162, 243, 254
TfiI	GAWTC	8 cut(s)	337, 498, 1156, 1225, 1516, 1544, 1741, 1862
Tru1I	TTAA	5 cut(s)	1005, 1491, 1530, 1568, 1977
Tru9I	TTAA	5 cut(s)	1005, 1491, 1530, 1568, 1977
TscAI	CASTG	8 cut(s)	242, 898, 981, 1024, 1188, 1267, 1467, 2344
TseFI	GTSAC	1 cut(s)	533
TseI	GCWGC	7 cut(s)	147, 282, 953, 1481, 2197, 2233, 2278
Tsp45I	GTSAC	1 cut(s)	533
TspDTI	ATGAA	8 cut(s)	17, 118, 708, 741, 912, 1419, 2291, 2397
TspGWI	ACGGA	1 cut(s)	2096
TspRI	CASTG	8 cut(s)	242, 898, 981, 1024, 1188, 1267, 1467, 2344
Vha464I	CTTAAG	2 cut(s)	1490, 1529
VpaK11BI	GGWCC	3 cut(s)	1777, 2104, 2212
XapI	RAATTY	3 cut(s)	547, 729, 1881
XbaI	TCTAGA	1 cut(s)	1828
XceI	RCATGY	3 cut(s)	166, 1405, 1768
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1570
XmiI	GTMKAC	2 cut(s)	1014, 2334
XspI	CTAG	5 cut(s)	504, 879, 950, 1829, 2261
Zsp2I	ATGCAT	1 cut(s)	1804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.