Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0011923

Physical Location & Seq

Genomic Coordinates Reverse (-)

23503922 .. 23506197

Gene Structure 2276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1270900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGCAGTTCAAGCAGCTATTTCGCAGGACAAACCTGATCAACATCCTCACCCAGCAACAAACCCGCCACTATGCTCACGATCTATTTCCCAACAAGGTCTCCCACTACCTCCACCGCGCCAAACTCATCGATTCCATTCGTCTCCAGCTCCGGTCCAACGCCCCAAACTCTCTCGCTCCGCTCGCAAACGACCGGCTTCTTGACTCCTTTGTTGTCACTCAAGCCCTCCGTTCCGCCCCCTCCGCCGATTCCGCCCTCTCCCTCGTTGAGTTTCTCGAATCAAACCGGCGTTTTGATCATACCCAGAACACGGTTCATGCCTTGGCCACCGTGCTTGCCAAGTCTCGCCGAGCTGCGGAGCTTAATTCCCTCATTGAAGCAGTTCATGCTGGGAAGTTTCGAAATGTTCGCGTCAGCTTCATGAATGTTATGCAGTGGAAGGCTGCAGTTGGAGATGTCGAGGCAGTTGTTAAAACATGGGATGAGTATAGGGTCAGCTCGGAGAAACGTGTGTGCGTGGAGTCTTATAACATTGTGATGCGCATTTTTGCGCAAATGGGGAAAGACTCGGAGGCGGTGAGGGTTTTTAGTATGATGATTGAAGAAGGGGCAATCCCGAATAGTCGGACTTATACAGTGATGATTGAGCACCTTGTGAGTTCTGGGAAGTGGAAATCTGCAATGGAGGTGTTTAATGTGCTGCCTTTGATGAGGGTAAAGCGAACTTTGAACCAGTTTTCAGTTTTGGTAGATGCATGTGTTGGTGTTGAACAGTTTGACGAGGTTGAGAATTTACTTAATGAAATGCGGGTTGATGGGATATTGCCCGGGCGAGCTATGCGTTTGTCTTTGCAACGGATTCAAGAGGCGGGGTTTGTTCATGAGACTGATGAATTTCTAAGAGAAATGTTGCCGAATGGGGGAATCAAGAGCATAAAGCATTGTGTTGATAGCGGTGATGGTGATGATGATGACGATGAGGATAGTGGTGAGGATGCTGGTGATGTTGGTGGAGTTGATGATGTTAATGGGGTTCAGTTAAAGCCGTGGTTAGACCCAAGATCATTAGCAAATGCCTTGCAAAAATGGAACTCTGATGAGGTATCAGCATTGGAGGAGGCAAAATTTGTGTGGACAACTCGTTTAGTATGCAAGATTCTTAGGAATTTTAAATCAGCAGAAACAGCTTGGAGTTTTTTCTGTTGGGTCACTTGTCAGCCGGGTTTTACTCATGATATTTACACAGTACAAAGGATGATGACCCTTTTAGCACGCCACGGGCTTTCTGAATTGGTTGACCAACTATTAAACAAAATAAGGATTGAGCAAATGAGATTGCCCTTCTGCACTATCAGGTTGATCATTGATTTTTATGGTATCTCAAAGGAAGCTGACGCTGCTCTGAAGGTCTTTCACGATGATAGAAACCTGTGTGGCCCTATATCGAACTTTAATTTGATGCTTCTGTATTCCTCTCTTTTACGAACATTGACCAAGTGCGGGAGGGATTCTGATGCATTGGATGTGCTTGAAGAGATGATTATGTCTGGGATTGTTCCCGATATCCAGACGTTTTCAGGGTTGATGCATCATTTTGCACTAAATGCGGACATCAAAACTGTGCAGAAACTCTTTGCAATGGTTAGGCAGAGTGGAGTTCAGCCAGATGCTTATATGTTTAAAGTCCTGATCCAAGCATATTGCAAGTGTGGGAGAGCTGCTCTTGCGTGGCGGGTTTTTGAAGACCTACGGAATTTAAAGTTGGTGCCTGACGCCGCCACAAAAGAGCTGCTTGTAAAGAGTCTTTGGAAGGAAGAAAAGCGGAGAGAGGCTGCCGCGGTGGAAGAGAGTTGTGAGGAAGTAAGTGACGCCCTTCCGCTCACATTGCGCGGCCACTTATGGACGCGGAATACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

639

Amino Acids

72.43

Weight (kDa)

6.28

Isoelectric Point (pI)

40.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	172 - 218	2.8e-09	PPR repeat family
PPR_2	PF13041	490 - 533	8e-06	PPR repeat family
PPR_2	PF13041	555 - 602	1.3e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66631
fragaria_vesca	FvH4_1g14280 FvH4_2g07140
malus_domestica	MD02G1156600.v1.1 MD15G1270900.v1.1
prunus_persica	Prupe.7G147200_v2.0.a1
pyrus_communis	pycom15g23480
rosa_chinensis	RchiOBHm_Chr2g0102871 RchiOBHm_Chr2g0102951
rosa_laevigata	RLG00000017190
rosa_multiflora	Rmu_sc0000388.1_g000043
rosa_roxburghii	Rroxscaffold_2G00140070 Rroxscaffold_2G00140200
rosa_rugosa	Rorug02G0110600
rosa_samantha	Rh2AG158900 Rh2BG165300 Rh2CG165500 Rh2DG164100
rosa_wichuraiana	Rw2G012420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	528
Acc16I	TGCGCA	2 cut(s)	542, 552
AccB1I	GGYRCC	1 cut(s)	1765
AccBSI	CCGCTC	2 cut(s)	181, 1879
AccII	CGCG	5 cut(s)	117, 411, 1838, 1890, 1906
AclWI	GGATC	1 cut(s)	1684
AcoI	YGGCCR	2 cut(s)	324, 1891
AcsI	RAATTY	5 cut(s)	790, 893, 1124, 1165, 1753
AcuI	CTGAAG	1 cut(s)	1424
AcyI	GRCGYC	2 cut(s)	1773, 1869
AdeI	CACNNNGTG	1 cut(s)	655
AfaI	GTAC	1 cut(s)	1248
AfiI	CCNNNNNNNGG	4 cut(s)	310, 355, 920, 1500
AflIII	ACRYGT	1 cut(s)	508
AgsI	TTSAA	8 cut(s)	10, 377, 602, 730, 770, 863, 1532, 1742
AjuI	GAANNNNNNNTTGG	2 cut(s)	1745, 1777
Alw21I	GWGCWC	1 cut(s)	651
Alw26I	GTCTC	4 cut(s)	103, 146, 348, 878
AlwI	GGATC	1 cut(s)	1684
Ama87I	CYCGRG	1 cut(s)	827
AoxI	GGCC	3 cut(s)	324, 1435, 1891
ApeKI	GCWGC	8 cut(s)	13, 353, 443, 700, 1397, 1718, 1789, 1832
ApoI	RAATTY	5 cut(s)	790, 893, 1124, 1165, 1753
Asp700I	GAANNNNTTC	1 cut(s)	381
AspLEI	GCGC	4 cut(s)	119, 543, 553, 1890
AspS9I	GGNCC	2 cut(s)	153, 1436
AsuC2I	CCSGG	3 cut(s)	828, 829, 1221
AsuHPI	GGTGA	6 cut(s)	40, 589, 968, 974, 1001, 1013
AsuII	TTCGAA	1 cut(s)	400
AvaI	CYCGRG	1 cut(s)	827
AvaII	GGWCC	1 cut(s)	153
BalI	TGGCCA	1 cut(s)	326
BanI	GGYRCC	1 cut(s)	1765
BbsI	GAAGAC	1 cut(s)	1749
Bbv12I	GWGCWC	1 cut(s)	651
BbvI	GCAGC	8 cut(s)	25, 340, 430, 687, 1384, 1705, 1776, 1819
BccI	CCATC	2 cut(s)	809, 953
BceAI	ACGGC	1 cut(s)	1030
BcgI	CGANNNNNNTGC	1 cut(s)	36
BclI	TGATCA	3 cut(s)	36, 295, 1359
BcnI	CCSGG	3 cut(s)	828, 829, 1221
BcoDI	GTCTC	4 cut(s)	103, 146, 348, 878
BfmI	CTRYAG	1 cut(s)	444
Bme1390I	CCNGG	3 cut(s)	828, 829, 1221
Bme18I	GGWCC	1 cut(s)	153
BmeT110I	CYCGRG	1 cut(s)	827
BmgT120I	GGNCC	2 cut(s)	153, 1436
BmiI	GGNNCC	1 cut(s)	1767
BmrFI	CCNGG	3 cut(s)	828, 829, 1221
BmsI	GCATC	8 cut(s)	528, 742, 985, 1449, 1504, 1575, 1597, 1657
BpiI	GAAGAC	1 cut(s)	1749
BplI	GAGNNNNNCTC	2 cut(s)	1705, 1737
BpmI	CTGGAG	1 cut(s)	128
Bpu14I	TTCGAA	1 cut(s)	400
BpuEI	CTTGAG	1 cut(s)	204
BpuMI	CCSGG	3 cut(s)	828, 829, 1221
Bsa29I	ATCGAT	1 cut(s)	129
BsaBI	GATNNNNATC	1 cut(s)	41
BsaHI	GRCGYC	2 cut(s)	1773, 1869
BsaI	GGTCTC	1 cut(s)	103
BsaJI	CCNNGG	5 cut(s)	321, 827, 1046, 1276, 1836
BsaWI	WCCGGW	1 cut(s)	150
BsaXI	ACNNNNNCTCC	2 cut(s)	83, 113
Bsc4I	CCNNNNNNNGG	4 cut(s)	310, 355, 920, 1500
Bse118I	RCCGGY	2 cut(s)	192, 285
Bse1I	ACTGG	1 cut(s)	733
Bse3DI	GCAATG	3 cut(s)	687, 1644, 1883
Bse8I	GATNNNNATC	1 cut(s)	41
BseCI	ATCGAT	1 cut(s)	129
BseDI	CCNNGG	5 cut(s)	321, 827, 1046, 1276, 1836
BseGI	GGATG	5 cut(s)	42, 487, 1000, 1260, 1528
BseJI	GATNNNNATC	1 cut(s)	41
BseLI	CCNNNNNNNGG	4 cut(s)	310, 355, 920, 1500
BseMI	GCAATG	3 cut(s)	687, 1644, 1883
BseNI	ACTGG	1 cut(s)	733
BseRI	GAGGAG	1 cut(s)	1130
BseXI	GCAGC	8 cut(s)	25, 340, 430, 687, 1384, 1705, 1776, 1819
BseYI	CCCAGC	2 cut(s)	51, 389
BsgI	GTGCAG	2 cut(s)	1330, 1643
Bsh1236I	CGCG	5 cut(s)	117, 411, 1838, 1890, 1906
Bsh1285I	CGRYCG	1 cut(s)	193
BshFI	GGCC	3 cut(s)	326, 1437, 1893
BshNI	GGYRCC	1 cut(s)	1765
BshVI	ATCGAT	1 cut(s)	129
BsiEI	CGRYCG	1 cut(s)	193
BsiHKAI	GWGCWC	1 cut(s)	651
BsiHKCI	CYCGRG	1 cut(s)	827
BsiSI	CCGG	5 cut(s)	151, 193, 286, 828, 1220
BslI	CCNNNNNNNGG	4 cut(s)	310, 355, 920, 1500
BsmAI	GTCTC	4 cut(s)	103, 146, 348, 878
BsmBI	CGTCTC	1 cut(s)	146
BsnI	GGCC	3 cut(s)	326, 1437, 1893
Bso31I	GGTCTC	1 cut(s)	103
BsoBI	CYCGRG	1 cut(s)	827
Bsp119I	TTCGAA	1 cut(s)	400
Bsp1286I	GDGCHC	1 cut(s)	651
Bsp143I	GATC	6 cut(s)	36, 79, 295, 1061, 1359, 1689
BspANI	GGCC	3 cut(s)	326, 1437, 1893
BspDI	ATCGAT	1 cut(s)	129
BspFNI	CGCG	5 cut(s)	117, 411, 1838, 1890, 1906
BspHI	TCATGA	3 cut(s)	420, 880, 1231
BspLI	GGNNCC	1 cut(s)	1767
BspMAI	CTGCAG	1 cut(s)	448
BspPI	GGATC	1 cut(s)	1684
BspT104I	TTCGAA	1 cut(s)	400
BspT107I	GGYRCC	1 cut(s)	1765
BspTNI	GGTCTC	1 cut(s)	103
BsrBI	CCGCTC	2 cut(s)	181, 1879
BsrDI	GCAATG	3 cut(s)	687, 1644, 1883
BsrFI	RCCGGY	2 cut(s)	192, 285
BsrI	ACTGG	1 cut(s)	733
BssAI	RCCGGY	2 cut(s)	192, 285
BssECI	CCNNGG	5 cut(s)	321, 827, 1046, 1276, 1836
BssMI	GATC	6 cut(s)	36, 79, 295, 1061, 1359, 1689
BssNI	GRCGYC	2 cut(s)	1773, 1869
BssT1I	CCWWGG	1 cut(s)	321
Bst4CI	ACNGT	6 cut(s)	313, 331, 637, 774, 1246, 1621
Bst6I	CTCTTC	2 cut(s)	1527, 1839
BstACI	GRCGYC	2 cut(s)	1773, 1869
BstAPI	GCANNNNNTGC	2 cut(s)	386, 1604
BstBI	TTCGAA	1 cut(s)	400
BstC8I	GCNNGC	4 cut(s)	183, 336, 834, 1273
BstDEI	CTNAG	2 cut(s)	899, 1160
BstDSI	CCRYGG	3 cut(s)	1046, 1276, 1836
BstF5I	GGATG	5 cut(s)	42, 487, 1000, 1260, 1528
BstFNI	CGCG	5 cut(s)	117, 411, 1838, 1890, 1906
BstHHI	GCGC	4 cut(s)	119, 543, 553, 1890
BstKTI	GATC	6 cut(s)	39, 82, 298, 1064, 1362, 1692
BstMAI	GTCTC	4 cut(s)	103, 146, 348, 878
BstMBI	GATC	6 cut(s)	36, 79, 295, 1061, 1359, 1689
BstMCI	CGRYCG	1 cut(s)	193
BstNSI	RCATGY	1 cut(s)	759
BstSCI	CCNGG	3 cut(s)	826, 827, 1219
BstSFI	CTRYAG	1 cut(s)	444
BstUI	CGCG	5 cut(s)	117, 411, 1838, 1890, 1906
BstV1I	GCAGC	8 cut(s)	25, 340, 430, 687, 1384, 1705, 1776, 1819
BstV2I	GAAGAC	1 cut(s)	1749
Bsu15I	ATCGAT	1 cut(s)	129
BsuRI	GGCC	3 cut(s)	326, 1437, 1893
BsuTUI	ATCGAT	1 cut(s)	129
BtgI	CCRYGG	3 cut(s)	1046, 1276, 1836
BtsCI	GGATG	5 cut(s)	42, 487, 1000, 1260, 1528
BtsI	GCAGTG	1 cut(s)	440
BtsIMutI	CAGTG	2 cut(s)	440, 642
Cac8I	GCNNGC	4 cut(s)	183, 336, 834, 1273
CciI	TCATGA	3 cut(s)	420, 880, 1231
CfoI	GCGC	4 cut(s)	119, 543, 553, 1890
Cfr10I	RCCGGY	2 cut(s)	192, 285
Cfr13I	GGNCC	2 cut(s)	153, 1436
Cfr42I	CCGCGG	1 cut(s)	1839
Cfr9I	CCCGGG	1 cut(s)	827
ClaI	ATCGAT	1 cut(s)	129
CseI	GACGC	5 cut(s)	400, 1403, 1781, 1877, 1912
Csp6I	GTAC	1 cut(s)	1247
CspCI	CAANNNNNGTGG	2 cut(s)	316, 351
CviAII	CATG	7 cut(s)	317, 386, 421, 477, 756, 881, 1232
CviQI	GTAC	1 cut(s)	1247
DdeI	CTNAG	2 cut(s)	899, 1160
DpnI	GATC	6 cut(s)	38, 81, 297, 1063, 1361, 1691
DpnII	GATC	6 cut(s)	36, 79, 295, 1061, 1359, 1689
DraI	TTTAAA	3 cut(s)	1171, 1681, 1758
DraIII	CACNNNGTG	1 cut(s)	655
EaeI	YGGCCR	2 cut(s)	324, 1891
Eam1104I	CTCTTC	2 cut(s)	1527, 1839
EarI	CTCTTC	2 cut(s)	1527, 1839
EciI	GGCGGA	3 cut(s)	223, 232, 241
Eco130I	CCWWGG	1 cut(s)	321
Eco31I	GGTCTC	1 cut(s)	103
Eco32I	GATATC	1 cut(s)	1564
Eco47I	GGWCC	1 cut(s)	153
Eco57I	CTGAAG	1 cut(s)	1424
Eco88I	CYCGRG	1 cut(s)	827
EcoRV	GATATC	1 cut(s)	1564
EcoT14I	CCWWGG	1 cut(s)	321
EcoT22I	ATGCAT	3 cut(s)	757, 1519, 1590
ErhI	CCWWGG	1 cut(s)	321
Esp3I	CGTCTC	1 cut(s)	146
FaeI	CATG	7 cut(s)	320, 389, 424, 480, 759, 884, 1235
FalI	AAGNNNNNCTT	2 cut(s)	1776, 1808
FatI	CATG	7 cut(s)	316, 385, 420, 476, 755, 880, 1231
FauI	CCCGC	5 cut(s)	71, 801, 862, 1493, 1725
FbaI	TGATCA	3 cut(s)	36, 295, 1359
FokI	GGATG	5 cut(s)	29, 494, 1007, 1267, 1535
FspAI	RTGCGCAY	1 cut(s)	542
FspI	TGCGCA	2 cut(s)	542, 552
GlaI	GCGC	4 cut(s)	118, 542, 552, 1889
GsaI	CCCAGC	2 cut(s)	55, 393
GsuI	CTGGAG	1 cut(s)	128
HaeIII	GGCC	3 cut(s)	326, 1437, 1893
HapII	CCGG	5 cut(s)	151, 193, 286, 828, 1220
HgaI	GACGC	5 cut(s)	400, 1403, 1781, 1877, 1912
HhaI	GCGC	4 cut(s)	119, 543, 553, 1890
Hin1I	GRCGYC	2 cut(s)	1773, 1869
Hin1II	CATG	7 cut(s)	320, 389, 424, 480, 759, 884, 1235
Hin6I	GCGC	4 cut(s)	117, 541, 551, 1888
HinP1I	GCGC	4 cut(s)	117, 541, 551, 1888
HincII	GTYRAC	1 cut(s)	1297
HindII	GTYRAC	1 cut(s)	1297
HpaII	CCGG	5 cut(s)	151, 193, 286, 828, 1220
HphI	GGTGA	6 cut(s)	40, 589, 968, 974, 1001, 1013
Hpy166II	GTNNAC	2 cut(s)	1134, 1297
Hpy188I	TCNGA	7 cut(s)	502, 571, 627, 1096, 1288, 1404, 1513
Hpy8I	GTNNAC	2 cut(s)	1134, 1297
HpyAV	CCTTC	6 cut(s)	433, 599, 1351, 1399, 1804, 1883
HpyCH4III	ACNGT	6 cut(s)	313, 331, 637, 774, 1246, 1621
HpyCH4IV	ACGT	2 cut(s)	508, 1571
HpyF3I	CTNAG	2 cut(s)	899, 1160
HpySE526I	ACGT	2 cut(s)	508, 1571
Hsp92I	GRCGYC	2 cut(s)	1773, 1869
Hsp92II	CATG	7 cut(s)	320, 389, 424, 480, 759, 884, 1235
HspAI	GCGC	4 cut(s)	117, 541, 551, 1888
Ksp22I	TGATCA	3 cut(s)	36, 295, 1359
KspI	CCGCGG	1 cut(s)	1839
Kzo9I	GATC	6 cut(s)	36, 79, 295, 1061, 1359, 1689
LmnI	GCTCC	3 cut(s)	153, 181, 358
Lsp1109I	GCAGC	8 cut(s)	25, 340, 430, 687, 1384, 1705, 1776, 1819
LweI	GCATC	8 cut(s)	528, 742, 985, 1449, 1504, 1575, 1597, 1657
MaeII	ACGT	2 cut(s)	508, 1571
MaeIII	GTNAC	3 cut(s)	214, 1207, 1865
MalI	GATC	6 cut(s)	38, 81, 297, 1063, 1361, 1691
MbiI	CCGCTC	2 cut(s)	181, 1879
MboI	GATC	6 cut(s)	36, 79, 295, 1061, 1359, 1689
MboII	GAAGA	5 cut(s)	614, 1544, 1754, 1826, 1856
MhlI	GDGCHC	1 cut(s)	651
MlsI	TGGCCA	1 cut(s)	326
MluCI	AATT	8 cut(s)	364, 790, 893, 1124, 1165, 1289, 1453, 1753
MluNI	TGGCCA	1 cut(s)	326
MlyI	GAGTC	4 cut(s)	197, 530, 560, 1810
MmeI	TCCRAC	3 cut(s)	180, 430, 605
Mox20I	TGGCCA	1 cut(s)	326
Mph1103I	ATGCAT	3 cut(s)	757, 1519, 1590
MroXI	GAANNNNTTC	1 cut(s)	381
MscI	TGGCCA	1 cut(s)	326
MslI	CAYNNNNRTG	1 cut(s)	536
Msp20I	TGGCCA	1 cut(s)	326
MspA1I	CMGCKG	1 cut(s)	1838
MspI	CCGG	5 cut(s)	151, 193, 286, 828, 1220
MspR9I	CCNGG	3 cut(s)	828, 829, 1221
MvnI	CGCG	5 cut(s)	117, 411, 1838, 1890, 1906
NciI	CCSGG	3 cut(s)	828, 829, 1221
NdeII	GATC	6 cut(s)	36, 79, 295, 1061, 1359, 1689
NlaIII	CATG	7 cut(s)	320, 389, 424, 480, 759, 884, 1235
NlaIV	GGNNCC	1 cut(s)	1767
NmeAIII	GCCGAG	1 cut(s)	374
NmuCI	GTSAC	3 cut(s)	214, 1207, 1865
NsbI	TGCGCA	2 cut(s)	542, 552
NsiI	ATGCAT	3 cut(s)	757, 1519, 1590
NspI	RCATGY	1 cut(s)	759
NspV	TTCGAA	1 cut(s)	400
PagI	TCATGA	3 cut(s)	420, 880, 1231
PdmI	GAANNNNTTC	1 cut(s)	381
PfeI	GAWTC	7 cut(s)	131, 248, 278, 859, 924, 1156, 1508
PleI	GAGTC	4 cut(s)	197, 529, 560, 1809
PpsI	GAGTC	4 cut(s)	197, 529, 560, 1809
PsiI	TTATAA	1 cut(s)	528
PspFI	CCCAGC	2 cut(s)	51, 389
PspN4I	GGNNCC	1 cut(s)	1767
PspPI	GGNCC	2 cut(s)	153, 1436
PstI	CTGCAG	1 cut(s)	448
RsaI	GTAC	1 cut(s)	1248
RsaNI	GTAC	1 cut(s)	1247
RseI	CAYNNNNRTG	1 cut(s)	536
SacII	CCGCGG	1 cut(s)	1839
Sau3AI	GATC	6 cut(s)	36, 79, 295, 1061, 1359, 1689
Sau96I	GGNCC	2 cut(s)	153, 1436
SchI	GAGTC	4 cut(s)	197, 530, 560, 1810
ScrFI	CCNGG	3 cut(s)	828, 829, 1221
SduI	GDGCHC	1 cut(s)	651
SfaNI	GCATC	8 cut(s)	528, 742, 985, 1449, 1504, 1575, 1597, 1657
SfcI	CTRYAG	1 cut(s)	444
Sfr303I	CCGCGG	1 cut(s)	1839
SfuI	TTCGAA	1 cut(s)	400
SgrBI	CCGCGG	1 cut(s)	1839
SinI	GGWCC	1 cut(s)	153
SmaI	CCCGGG	1 cut(s)	829
SmiMI	CAYNNNNRTG	1 cut(s)	536
SmlI	CTYRAG	1 cut(s)	219
SmoI	CTYRAG	1 cut(s)	219
SrfI	GCCCGGGC	1 cut(s)	829
Sse9I	AATT	8 cut(s)	364, 790, 893, 1124, 1165, 1289, 1453, 1753
StyD4I	CCNGG	3 cut(s)	826, 827, 1219
StyI	CCWWGG	1 cut(s)	321
TaaI	ACNGT	6 cut(s)	313, 331, 637, 774, 1246, 1621
TaiI	ACGT	2 cut(s)	511, 1574
TaqI	TCGA	5 cut(s)	129, 276, 400, 459, 1445
TasI	AATT	8 cut(s)	364, 790, 893, 1124, 1165, 1289, 1453, 1753
TatI	WGTACW	1 cut(s)	1246
TauI	GCSGC	3 cut(s)	1778, 1838, 1893
TfiI	GAWTC	7 cut(s)	131, 248, 278, 859, 924, 1156, 1508
TscAI	CASTG	2 cut(s)	440, 642
TseFI	GTSAC	3 cut(s)	214, 1207, 1865
TseI	GCWGC	8 cut(s)	13, 353, 443, 700, 1397, 1718, 1789, 1832
Tsp45I	GTSAC	3 cut(s)	214, 1207, 1865
TspDTI	ATGAA	7 cut(s)	305, 374, 409, 437, 816, 869, 906
TspGWI	ACGGA	3 cut(s)	218, 871, 1765
TspMI	CCCGGG	1 cut(s)	827
TspRI	CASTG	2 cut(s)	440, 642
VpaK11BI	GGWCC	1 cut(s)	153
XapI	RAATTY	5 cut(s)	790, 893, 1124, 1165, 1753
XceI	RCATGY	1 cut(s)	759
XmaI	CCCGGG	1 cut(s)	827
XmnI	GAANNNNTTC	1 cut(s)	381
Zsp2I	ATGCAT	3 cut(s)	757, 1519, 1590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.