Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0011923

Physical Location & Seq

Genomic Coordinates Forward (+)

78446147 .. 78448111

Gene Structure 1965 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00140200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGCATTTCAAGCACCTCTCCCGTGGCCCAAACCTCATCAAAACCCTCACCCATCACCAGACTCGCCACCCATTTCCCAACAAGCTCTCCCACTACCTCTACCGCGCCAAACTCATCGATTCCATTCGTCTCAAGCTCCGCAGCAATGCCTCAAACTCTCTTGCTCCTTTAGCAAATGACAGACTCCTGGATTCTTTTGTGGTCACTCAAGCCCTCCGCTCTGCTCCCTCAGCTGACTCTGCACTCTTGCTTAATGAAACGCTTGAGTCCAACCCCGACTTCATGCATACCCAGAACACGGTTCATGCGTTGGCTACGGTTCTGGCCAAGTCCGGAAGAGCCGGGGAGCTCAAGTACCTCATTGAGGCTGTCAATGCCGGGAGGTTTCGGAACGTTAGGCTGAGTTTTATGAACGTTATGCAGTGGCAAGCTGCTGTTGGGGACGTGGAGGCGGTTCTTCAAGTGTGGGAGGAGTATAGAGGGTCGGAGAAGCGTGTTTGCGCCGAGTCTTATAACATTGTCATGAGGGTTTATGCGCAAATGGGGAAGGACTGTGAGGCGGTGCGGGTTTTTTCTAGGATGATTGAAGAAGGGGTGCTTCCGAATTGTAGGACTTATACGGTGATGATTGAGCATATGGTGAATTGTGGGAAGTGGAGGTCTGCAATGGAGGTTTTTAAGGTGTTGCCTTTTATGAGGGTGAAGCGCACTTTGAGCCAGTATTTGCTTTTGGTGGAGGCGTGCGTTGGTGTGAAAAAGTTTGAGGAAGTTAAGGCTTTACTTGAGGAAATGCAGGTTGATGGACTGTTGCCTGGCCGAGCCATGCGTTCATCGTTGGAACAAATTCAAGAGGCGGGGTTTATTGAGGAGACTGAAGAGTTTCTGAGGGAAATGCTGCCTAATGAGGGAATCAAGAGTATAGGGTATTGTGATGATAGTACTGATGATAATGAGGATAGAGATGACGAGGATGCTGCTGCTGATGATGATGATCATGCTGGCAAAGGTAAAGAGGCTAGTGGGGTTCAGTTAAAACCGTGGTTAGACCCGAGATCACTGGCAAATGCGTTGCAAAGTTGGAGCCCTGATGAGGTATCAGCATTAGAGGAGGCAAAATTCGTGTGGACTACTCGGTTAGTATGCAAGATTCTTAGGAGTTTTAAATCAGCAGAAACGGCTTGGAAATTCTTTTGTTGGGTTGCTTGTCAGCGAGGTTTCACCCATGATATTTACACAGTTCAAAGGATGATGACCCTTTTAGCACGCCATGGACATGCTGAATTGGTTGATAAACTTTTATCCAAAGTAAGGATGGAGCAAATGAGATTGCCCTTTTCAACAATCAGGCTGATCATTGACTTTTATGGTATCTCGAAGAATGCTGACGCTGCTCTGAAGGTCTTTCACAATGATAGAAACCTGTGTGGCCCTATATCAAATTTCAATCTGATGCTTCTGTATTCATCTCTATTACGGACATTGACCAAATGTGGGAGGGATTCTGATGCATTGGATGTACTTGAAGAGATGAGCTTGAGTGGGATTTGCCCTGATATCCAGACATTTTCTGGGTTGATGCATCATTTTGCACTAAATGGGGACATCAAAACTGTGCAAAAACTATTTGCAATGGTTAGGCAGGGTGGAGTCCAGCCAGATGCTTATATGTTTAAAGTACTGATTCAAGCATATTGTAAGTGTGAGAGAGCTGCTCTTGCATGGAGAGCTTTTGAAGACTTGAGGAATTTGAATTTGCTGCCAGACGCTGCCACAAAAGAGTTGCTTGTAAAGAGTCTTTGGAAGGAAGGCAAGCGGAGAGAGGCTGCCGCTGTAGAAGAGAGTTGCGAGGAAACAAGTGATGTTCTTCCACTCACATTGCGTGGTCACATATGGACGGTTAGCTCTGCTGATCTCTCAAAAGTTTTTTCTATTTACTCCAGTAGCTTTACATCAGCTGGTAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

654

Amino Acids

74.0

Weight (kDa)

6.65

Isoelectric Point (pI)

39.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	169 - 213	2.9e-09	PPR repeat family
PPR_3	PF13812	506 - 565	2.1e-07	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66631
fragaria_vesca	FvH4_1g14280 FvH4_2g07140
malus_domestica	MD02G1156600.v1.1 MD15G1270900.v1.1
prunus_persica	Prupe.7G147200_v2.0.a1
pyrus_communis	pycom15g23480
rosa_chinensis	RchiOBHm_Chr2g0102871 RchiOBHm_Chr2g0102951
rosa_laevigata	RLG00000017190
rosa_multiflora	Rmu_sc0000388.1_g000043
rosa_roxburghii	Rroxscaffold_2G00140070 Rroxscaffold_2G00140200
rosa_rugosa	Rorug02G0110600
rosa_samantha	Rh2AG158900 Rh2BG165300 Rh2CG165500 Rh2DG164100
rosa_wichuraiana	Rw2G012420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	513
Acc16I	TGCGCA	1 cut(s)	537
Acc36I	ACCTGC	1 cut(s)	784
AccBSI	CCGCTC	1 cut(s)	219
AccII	CGCG	1 cut(s)	105
AccIII	TCCGGA	1 cut(s)	332
AciI	CCGC	9 cut(s)	103, 139, 217, 452, 560, 565, 854, 1813, 1827
AclI	AACGTT	2 cut(s)	393, 414
AcoI	YGGCCR	2 cut(s)	324, 814
AcsI	RAATTY	6 cut(s)	843, 1115, 1184, 1438, 1744, 1750
AcuI	CTGAAG	2 cut(s)	894, 1415
AfaI	GTAC	4 cut(s)	356, 940, 1518, 1677
AfiI	CCNNNNNNNGG	6 cut(s)	298, 364, 905, 1090, 1308, 1491
AjiI	CACGTC	1 cut(s)	445
AjnI	CCWGG	2 cut(s)	186, 811
AjuI	GAANNNNNNNTTGG	2 cut(s)	263, 295
Alw21I	GWGCWC	1 cut(s)	351
Alw26I	GTCTC	2 cut(s)	134, 863
AlwNI	CAGNNNCTG	1 cut(s)	1766
Ama87I	CYCGRG	1 cut(s)	1048
Aor13HI	TCCGGA	1 cut(s)	332
AoxI	GGCC	4 cut(s)	25, 324, 814, 1426
ApoI	RAATTY	6 cut(s)	843, 1115, 1184, 1438, 1744, 1750
Asp700I	GAANNNNTTC	2 cut(s)	843, 879
AspLEI	GCGC	4 cut(s)	107, 503, 538, 708
AspS9I	GGNCC	2 cut(s)	26, 1427
AsuC2I	CCSGG	2 cut(s)	343, 379
AsuHPI	GGTGA	6 cut(s)	40, 47, 634, 652, 712, 1210
AvaI	CYCGRG	1 cut(s)	1048
BalI	TGGCCA	1 cut(s)	326
BanII	GRGCYC	2 cut(s)	351, 1085
BbsI	GAAGAC	1 cut(s)	1740
Bbv12I	GWGCWC	1 cut(s)	351
BbvCI	CCTCAGC	1 cut(s)	229
BccI	CCATC	3 cut(s)	60, 794, 1306
BceAI	ACGGC	1 cut(s)	1191
BcgI	CGANNNNNNTGC	2 cut(s)	956, 990
BciT130I	CCWGG	2 cut(s)	188, 813
BclI	TGATCA	2 cut(s)	991, 1350
BcnI	CCSGG	2 cut(s)	343, 379
BcoDI	GTCTC	2 cut(s)	134, 863
BfaI	CTAG	2 cut(s)	576, 1017
BfmI	CTRYAG	1 cut(s)	1830
BfuAI	ACCTGC	1 cut(s)	784
BmcAI	AGTACT	2 cut(s)	940, 1677
Bme1390I	CCNGG	4 cut(s)	188, 343, 379, 813
BmeT110I	CYCGRG	1 cut(s)	1048
BmgBI	CACGTC	1 cut(s)	445
BmgT120I	GGNCC	2 cut(s)	26, 1427
BmiI	GGNNCC	1 cut(s)	1082
BmrFI	CCNGG	4 cut(s)	188, 343, 379, 813
BmsI	GCATC	6 cut(s)	961, 1440, 1495, 1566, 1588, 1648
BpiI	GAAGAC	1 cut(s)	1740
BplI	GAGNNNNNCTC	2 cut(s)	1696, 1728
BpmI	CTGGAG	1 cut(s)	1921
Bpu10I	CCTNAGC	1 cut(s)	229
BpuEI	CTTGAG	7 cut(s)	116, 192, 284, 335, 803, 1555, 1759
BpuMI	CCSGG	2 cut(s)	343, 379
Bsa29I	ATCGAT	1 cut(s)	117
BsaBI	GATNNNNATC	1 cut(s)	990
BsaJI	CCNNGG	4 cut(s)	22, 342, 1037, 1267
BsaWI	WCCGGW	1 cut(s)	332
BsaXI	ACNNNNNCTCC	4 cut(s)	71, 101, 338, 368
Bsc4I	CCNNNNNNNGG	6 cut(s)	298, 364, 905, 1090, 1308, 1491
Bse1I	ACTGG	3 cut(s)	718, 1062, 1938
Bse3DI	GCAATG	4 cut(s)	151, 672, 1635, 1874
Bse8I	GATNNNNATC	1 cut(s)	990
BseAI	TCCGGA	1 cut(s)	332
BseBI	CCWGG	2 cut(s)	188, 813
BseCI	ATCGAT	1 cut(s)	117
BseDI	CCNNGG	4 cut(s)	22, 342, 1037, 1267
BseGI	GGATG	5 cut(s)	585, 976, 1251, 1317, 1519
BseJI	GATNNNNATC	1 cut(s)	990
BseLI	CCNNNNNNNGG	6 cut(s)	298, 364, 905, 1090, 1308, 1491
BseMI	GCAATG	4 cut(s)	151, 672, 1635, 1874
BseMII	CTCAG	3 cut(s)	243, 392, 875
BseNI	ACTGG	3 cut(s)	718, 1062, 1938
BseRI	GAGGAG	3 cut(s)	485, 881, 1121
BsgI	GTGCAG	1 cut(s)	225
Bsh1236I	CGCG	1 cut(s)	105
BshFI	GGCC	4 cut(s)	27, 326, 816, 1428
BshVI	ATCGAT	1 cut(s)	117
BsiHKAI	GWGCWC	1 cut(s)	351
BsiHKCI	CYCGRG	1 cut(s)	1048
BsiSI	CCGG	3 cut(s)	333, 342, 378
BslFI	GGGAC	2 cut(s)	455, 1613
BslI	CCNNNNNNNGG	6 cut(s)	298, 364, 905, 1090, 1308, 1491
BsmAI	GTCTC	2 cut(s)	134, 863
BsmBI	CGTCTC	1 cut(s)	134
BsmFI	GGGAC	2 cut(s)	455, 1613
BsmI	GAATGC	1 cut(s)	1384
BsnI	GGCC	4 cut(s)	27, 326, 816, 1428
BsoBI	CYCGRG	1 cut(s)	1048
Bsp1286I	GDGCHC	2 cut(s)	351, 1085
Bsp13I	TCCGGA	1 cut(s)	332
Bsp143I	GATC	4 cut(s)	991, 1052, 1350, 1909
Bsp19I	CCATGG	1 cut(s)	1267
BspACI	CCGC	9 cut(s)	103, 139, 217, 452, 560, 565, 854, 1813, 1827
BspANI	GGCC	4 cut(s)	27, 326, 816, 1428
BspCNI	CTCAG	3 cut(s)	242, 393, 876
BspDI	ATCGAT	1 cut(s)	117
BspEI	TCCGGA	1 cut(s)	332
BspFNI	CGCG	1 cut(s)	105
BspHI	TCATGA	1 cut(s)	522
BspLI	GGNNCC	1 cut(s)	1082
BspMI	ACCTGC	1 cut(s)	784
BspQI	GCTCTTC	1 cut(s)	331
BsrBI	CCGCTC	1 cut(s)	219
BsrDI	GCAATG	4 cut(s)	151, 672, 1635, 1874
BsrI	ACTGG	3 cut(s)	718, 1062, 1938
BssECI	CCNNGG	4 cut(s)	22, 342, 1037, 1267
BssMI	GATC	4 cut(s)	991, 1052, 1350, 1909
BssT1I	CCWWGG	1 cut(s)	1267
Bst2UI	CCWGG	2 cut(s)	188, 813
Bst4CI	ACNGT	9 cut(s)	301, 319, 554, 622, 807, 1038, 1237, 1612, 1897
Bst6I	CTCTTC	4 cut(s)	331, 870, 1518, 1830
BstC8I	GCNNGC	5 cut(s)	429, 742, 1000, 1264, 1811
BstDEI	CTNAG	4 cut(s)	229, 401, 884, 1151
BstDSI	CCRYGG	3 cut(s)	22, 1037, 1267
BstENI	CCTNNNNNAGG	1 cut(s)	362
BstF5I	GGATG	5 cut(s)	585, 976, 1251, 1317, 1519
BstFNI	CGCG	1 cut(s)	105
BstHHI	GCGC	4 cut(s)	107, 503, 538, 708
BstKTI	GATC	4 cut(s)	994, 1055, 1353, 1912
BstMAI	GTCTC	2 cut(s)	134, 863
BstMBI	GATC	4 cut(s)	991, 1052, 1350, 1909
BstNI	CCWGG	2 cut(s)	188, 813
BstNSI	RCATGY	1 cut(s)	1277
BstSCI	CCNGG	4 cut(s)	186, 341, 377, 811
BstSFI	CTRYAG	1 cut(s)	1830
BstUI	CGCG	1 cut(s)	105
BstV2I	GAAGAC	1 cut(s)	1740
Bsu15I	ATCGAT	1 cut(s)	117
BsuRI	GGCC	4 cut(s)	27, 326, 816, 1428
BsuTUI	ATCGAT	1 cut(s)	117
BtgI	CCRYGG	3 cut(s)	22, 1037, 1267
BtrI	CACGTC	1 cut(s)	445
BtsCI	GGATG	5 cut(s)	585, 976, 1251, 1317, 1519
BtsI	GCAGTG	1 cut(s)	428
BtsIMutI	CAGTG	2 cut(s)	428, 1055
BveI	ACCTGC	1 cut(s)	784
Cac8I	GCNNGC	5 cut(s)	429, 742, 1000, 1264, 1811
CaiI	CAGNNNCTG	1 cut(s)	1766
CciI	TCATGA	1 cut(s)	522
CfoI	GCGC	4 cut(s)	107, 503, 538, 708
Cfr13I	GGNCC	2 cut(s)	26, 1427
ClaI	ATCGAT	1 cut(s)	117
CseI	GACGC	2 cut(s)	1394, 1772
Csp6I	GTAC	4 cut(s)	355, 939, 1517, 1676
CspCI	CAANNNNNGTGG	2 cut(s)	1857, 1892
CviAII	CATG	9 cut(s)	283, 305, 523, 823, 995, 1223, 1268, 1274, 1719
CviQI	GTAC	4 cut(s)	355, 939, 1517, 1676
DdeI	CTNAG	4 cut(s)	229, 401, 884, 1151
DpnI	GATC	4 cut(s)	993, 1054, 1352, 1911
DpnII	GATC	4 cut(s)	991, 1052, 1350, 1909
DraI	TTTAAA	2 cut(s)	1162, 1672
EaeI	YGGCCR	2 cut(s)	324, 814
Eam1104I	CTCTTC	4 cut(s)	331, 870, 1518, 1830
EarI	CTCTTC	4 cut(s)	331, 870, 1518, 1830
Ecl136II	GAGCTC	1 cut(s)	349
Eco130I	CCWWGG	1 cut(s)	1267
Eco24I	GRGCYC	2 cut(s)	351, 1085
Eco32I	GATATC	1 cut(s)	1555
Eco53kI	GAGCTC	1 cut(s)	349
Eco57I	CTGAAG	2 cut(s)	894, 1415
Eco88I	CYCGRG	1 cut(s)	1048
EcoICRI	GAGCTC	1 cut(s)	349
EcoNI	CCTNNNNNAGG	1 cut(s)	362
EcoRII	CCWGG	2 cut(s)	186, 811
EcoRV	GATATC	1 cut(s)	1555
EcoT14I	CCWWGG	1 cut(s)	1267
EcoT22I	ATGCAT	4 cut(s)	6, 288, 1510, 1581
EcoT38I	GRGCYC	2 cut(s)	351, 1085
ErhI	CCWWGG	1 cut(s)	1267
Esp3I	CGTCTC	1 cut(s)	134
FaeI	CATG	9 cut(s)	286, 308, 526, 826, 998, 1226, 1271, 1277, 1722
FalI	AAGNNNNNCTT	4 cut(s)	582, 614, 1767, 1799
FaqI	GGGAC	2 cut(s)	455, 1613
FatI	CATG	9 cut(s)	282, 304, 522, 822, 994, 1222, 1267, 1273, 1718
FauI	CCCGC	2 cut(s)	558, 847
FauNDI	CATATG	2 cut(s)	636, 1889
FbaI	TGATCA	2 cut(s)	991, 1350
FokI	GGATG	5 cut(s)	592, 983, 1258, 1324, 1526
FriOI	GRGCYC	2 cut(s)	351, 1085
FspBI	CTAG	2 cut(s)	576, 1017
FspI	TGCGCA	1 cut(s)	537
GlaI	GCGC	4 cut(s)	106, 502, 537, 707
GsuI	CTGGAG	1 cut(s)	1921
HaeIII	GGCC	4 cut(s)	27, 326, 816, 1428
HapII	CCGG	3 cut(s)	333, 342, 378
HgaI	GACGC	2 cut(s)	1394, 1772
HhaI	GCGC	4 cut(s)	107, 503, 538, 708
Hin1II	CATG	9 cut(s)	286, 308, 526, 826, 998, 1226, 1271, 1277, 1722
Hin6I	GCGC	4 cut(s)	105, 501, 536, 706
HinP1I	GCGC	4 cut(s)	105, 501, 536, 706
HpaII	CCGG	3 cut(s)	333, 342, 378
HphI	GGTGA	6 cut(s)	40, 47, 634, 652, 712, 1210
Hpy166II	GTNNAC	1 cut(s)	1125
Hpy188I	TCNGA	7 cut(s)	390, 487, 603, 885, 1395, 1449, 1504
Hpy188III	TCNNGA	6 cut(s)	333, 523, 848, 913, 1372, 1558
Hpy8I	GTNNAC	1 cut(s)	1125
HpyAV	CCTTC	5 cut(s)	541, 584, 1390, 1795, 1799
HpyCH4III	ACNGT	9 cut(s)	301, 319, 554, 622, 807, 1038, 1237, 1612, 1897
HpyCH4IV	ACGT	3 cut(s)	393, 414, 444
HpyF3I	CTNAG	4 cut(s)	229, 401, 884, 1151
HpySE526I	ACGT	3 cut(s)	393, 414, 444
Hsp92II	CATG	9 cut(s)	286, 308, 526, 826, 998, 1226, 1271, 1277, 1722
HspAI	GCGC	4 cut(s)	105, 501, 536, 706
Kpn2I	TCCGGA	1 cut(s)	332
Ksp22I	TGATCA	2 cut(s)	991, 1350
Kzo9I	GATC	4 cut(s)	991, 1052, 1350, 1909
LguI	GCTCTTC	1 cut(s)	331
LmnI	GCTCC	6 cut(s)	141, 169, 229, 346, 1080, 1315
LweI	GCATC	6 cut(s)	961, 1440, 1495, 1566, 1588, 1648
MaeI	CTAG	2 cut(s)	576, 1017
MaeII	ACGT	3 cut(s)	393, 414, 444
MaeIII	GTNAC	2 cut(s)	202, 1883
MalI	GATC	4 cut(s)	993, 1054, 1352, 1911
MbiI	CCGCTC	1 cut(s)	219
MboI	GATC	4 cut(s)	991, 1052, 1350, 1909
MboII	GAAGA	9 cut(s)	348, 449, 599, 887, 1387, 1535, 1745, 1847, 1856
MhlI	GDGCHC	2 cut(s)	351, 1085
MlsI	TGGCCA	1 cut(s)	326
MluCI	AATT	9 cut(s)	604, 643, 843, 1115, 1184, 1280, 1438, 1744, 1750
MluNI	TGGCCA	1 cut(s)	326
MlyI	GAGTC	7 cut(s)	55, 177, 230, 275, 515, 1656, 1801
MmeI	TCCRAC	4 cut(s)	294, 465, 816, 1058
Mox20I	TGGCCA	1 cut(s)	326
Mph1103I	ATGCAT	4 cut(s)	6, 288, 1510, 1581
MroI	TCCGGA	1 cut(s)	332
MroXI	GAANNNNTTC	2 cut(s)	843, 879
MscI	TGGCCA	1 cut(s)	326
MseI	TTAA	6 cut(s)	252, 678, 771, 1031, 1161, 1671
MslI	CAYNNNNRTG	2 cut(s)	521, 1272
Msp20I	TGGCCA	1 cut(s)	326
MspA1I	CMGCKG	3 cut(s)	233, 1829, 1955
MspI	CCGG	3 cut(s)	333, 342, 378
MspR9I	CCNGG	4 cut(s)	188, 343, 379, 813
Mva1269I	GAATGC	1 cut(s)	1384
MvaI	CCWGG	2 cut(s)	188, 813
MvnI	CGCG	1 cut(s)	105
NciI	CCSGG	2 cut(s)	343, 379
NcoI	CCATGG	1 cut(s)	1267
NdeI	CATATG	2 cut(s)	636, 1889
NdeII	GATC	4 cut(s)	991, 1052, 1350, 1909
NlaIII	CATG	9 cut(s)	286, 308, 526, 826, 998, 1226, 1271, 1277, 1722
NlaIV	GGNNCC	1 cut(s)	1082
NmeAIII	GCCGAG	2 cut(s)	529, 842
NmuCI	GTSAC	2 cut(s)	202, 1883
NsbI	TGCGCA	1 cut(s)	537
NsiI	ATGCAT	4 cut(s)	6, 288, 1510, 1581
NspI	RCATGY	1 cut(s)	1277
PagI	TCATGA	1 cut(s)	522
PciSI	GCTCTTC	1 cut(s)	331
PcsI	WCGNNNNNNNCGW	1 cut(s)	305
PctI	GAATGC	1 cut(s)	1384
PdmI	GAANNNNTTC	2 cut(s)	843, 879
PfeI	GAWTC	6 cut(s)	119, 191, 909, 1147, 1499, 1681
PfoI	TCCNGGA	1 cut(s)	186
PleI	GAGTC	7 cut(s)	55, 177, 230, 274, 514, 1655, 1800
PpsI	GAGTC	7 cut(s)	55, 177, 230, 274, 514, 1655, 1800
PsiI	TTATAA	1 cut(s)	513
Psp124BI	GAGCTC	1 cut(s)	351
Psp1406I	AACGTT	2 cut(s)	393, 414
Psp6I	CCWGG	2 cut(s)	186, 811
PspGI	CCWGG	2 cut(s)	186, 811
PspN4I	GGNNCC	1 cut(s)	1082
PspPI	GGNCC	2 cut(s)	26, 1427
PstNI	CAGNNNCTG	1 cut(s)	1766
PvuII	CAGCTG	2 cut(s)	233, 1955
RsaI	GTAC	4 cut(s)	356, 940, 1518, 1677
RsaNI	GTAC	4 cut(s)	355, 939, 1517, 1676
RseI	CAYNNNNRTG	2 cut(s)	521, 1272
SacI	GAGCTC	1 cut(s)	351
SapI	GCTCTTC	1 cut(s)	331
SaqAI	TTAA	6 cut(s)	252, 678, 771, 1031, 1161, 1671
Sau3AI	GATC	4 cut(s)	991, 1052, 1350, 1909
Sau96I	GGNCC	2 cut(s)	26, 1427
ScaI	AGTACT	2 cut(s)	940, 1677
SchI	GAGTC	7 cut(s)	55, 177, 230, 275, 515, 1656, 1801
ScrFI	CCNGG	4 cut(s)	188, 343, 379, 813
SduI	GDGCHC	2 cut(s)	351, 1085
SfaNI	GCATC	6 cut(s)	961, 1440, 1495, 1566, 1588, 1648
SfcI	CTRYAG	1 cut(s)	1830
SmiMI	CAYNNNNRTG	2 cut(s)	521, 1272
SmlI	CTYRAG	7 cut(s)	131, 207, 263, 350, 782, 1534, 1738
SmoI	CTYRAG	7 cut(s)	131, 207, 263, 350, 782, 1534, 1738
Sse9I	AATT	9 cut(s)	604, 643, 843, 1115, 1184, 1280, 1438, 1744, 1750
SsiI	CCGC	9 cut(s)	103, 139, 217, 452, 560, 565, 854, 1813, 1827
SspMI	CTAG	2 cut(s)	576, 1017
SstI	GAGCTC	1 cut(s)	351
StyD4I	CCNGG	4 cut(s)	186, 341, 377, 811
StyI	CCWWGG	1 cut(s)	1267
TaaI	ACNGT	9 cut(s)	301, 319, 554, 622, 807, 1038, 1237, 1612, 1897
TaiI	ACGT	3 cut(s)	396, 417, 447
TaqI	TCGA	2 cut(s)	117, 1373
TasI	AATT	9 cut(s)	604, 643, 843, 1115, 1184, 1280, 1438, 1744, 1750
TatI	WGTACW	3 cut(s)	938, 1516, 1675
TauI	GCSGC	1 cut(s)	1829
TfiI	GAWTC	6 cut(s)	119, 191, 909, 1147, 1499, 1681
Tru1I	TTAA	6 cut(s)	252, 678, 771, 1031, 1161, 1671
Tru9I	TTAA	6 cut(s)	252, 678, 771, 1031, 1161, 1671
TscAI	CASTG	2 cut(s)	428, 1062
TseFI	GTSAC	2 cut(s)	202, 1883
Tsp45I	GTSAC	2 cut(s)	202, 1883
TspDTI	ATGAA	6 cut(s)	270, 271, 293, 425, 819, 1452
TspGWI	ACGGA	1 cut(s)	1489
TspRI	CASTG	2 cut(s)	428, 1062
XagI	CCTNNNNNAGG	1 cut(s)	362
XapI	RAATTY	6 cut(s)	843, 1115, 1184, 1438, 1744, 1750
XceI	RCATGY	1 cut(s)	1277
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1309, 1565
XmnI	GAANNNNTTC	2 cut(s)	843, 879
XspI	CTAG	2 cut(s)	576, 1017
ZrmI	AGTACT	2 cut(s)	940, 1677
Zsp2I	ATGCAT	4 cut(s)	6, 288, 1510, 1581

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.