Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0011923

Physical Location & Seq

Genomic Coordinates Reverse (-)

14798316 .. 14800728

Gene Structure 2413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG165500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGCATTTCAAGCACCTCTCCCGTGGCCTAAACCTCATCAAAACCCTCACCCATCACCAGACTCGCCCCTACGCTCGCCACCCATTTCCCAACAAGCTCTCCCACTACCTCTACCGCGCCAAACTCATCGATTCCATTCGTCTCAAGCTCCGCAGCAGTGCCCCAAACTCTCTTGCTCATTTAGCAAATGACAGACTCCTGGATTCTTTTGTGGTCACTCAGGCCCTCCGCTCTGCTCCCTCCGCTGACTCTGCACTCTTGCTTAATGAAACGCTTGAGTCCAACCCCGACTTCATGCATACCCAGAACACGGTTCATGCGTTGGCTACGGTTCTGGCCAAGTCCGGAAGAGCCGGGGAGCTCAAGTACCTCATTGAGGCTGTCAATGCCGGGAGGTTTCGGAACGTTAGGCTGAGTTTTATGAACCTTATGCAGTGGCAAGCTGCTGTTGGGGACGTGGAGGCGGTTCTTCAAGTGTGGGAGGAGTATAGAGGGTCGGAGAAGCGTGTGTGCGCTGAGTCTTATAACATTGTCATGAGGGTTTATGTGCAAATGGGGAAGGACTGTGAGGCGGTGCGGGTTTTTTCTAGGATGATTGAAGAAGGGGCGCTTCCGAATTGTAGGACTTATACGGTGATGATTGAGCATATGGTGAATTGTGGGAAGTGGAGGTCTGCAATGGAGGTTTTTAAGGTGTTGCCTTTTATGAGGGTGAAGCGCACTTTGAGCCAGTATTTGCTTTTGGTGGAGGCGTGCGTTGTTGCGAAAAAGTTTGAGGAAGTTAAGGCTTTACTTGAGGAAATGCGGGTTGATGGACTGTTGCCTGGCCGAGCCATGCGTTTATCGTTGGAACAAATTCAAGAGGCGGGGTTTATTGAGGAGACTGAAGAGTTTCTGAGGGAAATGCTGCCTAATGAGGGAATCAAGAGTATAGGGTATTGTGATGATAGTTGTGATGATGAGGAGGATAGAGATGACGAGGATGCTGCTGCTGATGATGATGATCATGCTGGCGAAGGTAAAGAGCCTAGTGGGGTTCAGTTAAAACCATGGTTAGACCCGAGATCACTGGCAAATGCGTTGCAAAGTTGGAGCCCTGATGAGGTATCAGCATTAGAGGAGGCAAAATTCGTGTGGACTACTCGGTTAGTATGCAAGATTCTTAGGAGTTTTAAATCAGCAGAAACGGCTTGGAAATTCTTTTGTTGGGTTGCTTGTCAGCCAGGTTTTACCCATGATATTTACACAGTTCAAAGGATGATGACCCTTTTAGCACGCCATGGACATGCTGAATTGGTTGATAAACTTTTATCCAAATTAAGGATGGAGCAAATGAGATTGCCCTTTTCAACAATCAGGCTGATCATTGACTTTTATGGTATCTCGAAGAATGCTGACGCTGCTCTGAAGGTCTTTCACAATGATAGAAACCTGTGTGGCCCTATATCAAATTTCAATCTGATGCTTCTGTATTCATCTCTATTACGGACATTGACCAAATGCGGGAGGGATTCTGATGCATTGGATGTACTTGAAGAGATGAGCTTGAGTGGGATTTGCCCTGATATCCAGACATTTTCTGGGTTGATGCATCATTTTGCACTAAATGGGGACATCAAAACTGTGCAAAAACTATTTGCAATGGTTAGGCAGAGTGGAGTCCAGCCAGATGCTTATATGTTTAAAGTACTGATTCAAGCATATTGTAAGTGTGAGAGAGCTGCTCTTGCATGGAGAGCTTTTGAAGACTTGAGGAATTTGAATTTGCTGCCGGACGCTGCCACAAAAGAGTTGCTTGTAAAGAGTCTTTGGAAGGAAGGAAAGCGGAGAGAGGCTGCCGCTGTAGAAGAGAGTTGCGAGGAAACAAGTGATGTTCTTCCACTCACATTGCGTGGTCACATATGGACGGTTAGCTCTGCTGATCTCTCAAAAGTTTTTTCTATTTACTCCAGTAGCTTTACATCAGCTGGTAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

658

Amino Acids

74.64

Weight (kDa)

6.44

Isoelectric Point (pI)

42.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	173 - 217	1.4e-08	PPR repeat family
PPR_3	PF13812	510 - 569	9.7e-08	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66631
fragaria_vesca	FvH4_1g14280 FvH4_2g07140
malus_domestica	MD02G1156600.v1.1 MD15G1270900.v1.1
prunus_persica	Prupe.7G147200_v2.0.a1
pyrus_communis	pycom15g23480
rosa_chinensis	RchiOBHm_Chr2g0102871 RchiOBHm_Chr2g0102951
rosa_laevigata	RLG00000017190
rosa_multiflora	Rmu_sc0000388.1_g000043
rosa_roxburghii	Rroxscaffold_2G00140070 Rroxscaffold_2G00140200
rosa_rugosa	Rorug02G0110600
rosa_samantha	Rh2AG158900 Rh2BG165300 Rh2CG165500 Rh2DG164100
rosa_wichuraiana	Rw2G012420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	525
AccBSI	CCGCTC	1 cut(s)	231
AccII	CGCG	1 cut(s)	117
AccIII	TCCGGA	1 cut(s)	344
AclI	AACGTT	1 cut(s)	405
AcoI	YGGCCR	2 cut(s)	336, 826
AcsI	RAATTY	6 cut(s)	855, 1127, 1196, 1450, 1756, 1762
AcuI	CTGAAG	2 cut(s)	906, 1427
AfaI	GTAC	3 cut(s)	368, 1530, 1689
AfiI	CCNNNNNNNGG	6 cut(s)	310, 376, 917, 1102, 1320, 1503
AjiI	CACGTC	1 cut(s)	457
AjnI	CCWGG	3 cut(s)	198, 823, 1222
AjuI	GAANNNNNNNTTGG	2 cut(s)	275, 307
Alw21I	GWGCWC	1 cut(s)	363
Alw26I	GTCTC	2 cut(s)	146, 875
Ama87I	CYCGRG	1 cut(s)	1060
Aor13HI	TCCGGA	1 cut(s)	344
AoxI	GGCC	5 cut(s)	25, 222, 336, 826, 1438
ApoI	RAATTY	6 cut(s)	855, 1127, 1196, 1450, 1756, 1762
Asp700I	GAANNNNTTC	2 cut(s)	855, 891
AspLEI	GCGC	4 cut(s)	119, 515, 610, 720
AspS9I	GGNCC	2 cut(s)	223, 1439
AsuC2I	CCSGG	2 cut(s)	355, 391
AsuHPI	GGTGA	5 cut(s)	40, 47, 646, 664, 724
AvaI	CYCGRG	1 cut(s)	1060
BaeGI	GKGCMC	1 cut(s)	163
BalI	TGGCCA	1 cut(s)	338
BanII	GRGCYC	2 cut(s)	363, 1097
BbsI	GAAGAC	1 cut(s)	1752
Bbv12I	GWGCWC	1 cut(s)	363
BccI	CCATC	3 cut(s)	60, 806, 1318
BceAI	ACGGC	1 cut(s)	1203
BcgI	CGANNNNNNTGC	2 cut(s)	968, 1002
BciT130I	CCWGG	3 cut(s)	200, 825, 1224
BclI	TGATCA	2 cut(s)	1003, 1362
BcnI	CCSGG	2 cut(s)	355, 391
BcoDI	GTCTC	2 cut(s)	146, 875
BfaI	CTAG	2 cut(s)	588, 1029
BfmI	CTRYAG	1 cut(s)	1842
BfoI	RGCGCY	1 cut(s)	611
BmcAI	AGTACT	1 cut(s)	1689
Bme1390I	CCNGG	5 cut(s)	200, 355, 391, 825, 1224
BmeT110I	CYCGRG	1 cut(s)	1060
BmgBI	CACGTC	1 cut(s)	457
BmgT120I	GGNCC	2 cut(s)	223, 1439
BmiI	GGNNCC	1 cut(s)	1094
BmrFI	CCNGG	5 cut(s)	200, 355, 391, 825, 1224
BmsI	GCATC	6 cut(s)	973, 1452, 1507, 1578, 1600, 1660
BpiI	GAAGAC	1 cut(s)	1752
BplI	GAGNNNNNCTC	2 cut(s)	1708, 1740
BpmI	CTGGAG	1 cut(s)	1933
BpuEI	CTTGAG	6 cut(s)	128, 296, 347, 815, 1567, 1771
BpuMI	CCSGG	2 cut(s)	355, 391
Bsa29I	ATCGAT	1 cut(s)	129
BsaBI	GATNNNNATC	1 cut(s)	1002
BsaJI	CCNNGG	4 cut(s)	22, 354, 1049, 1279
BsaWI	WCCGGW	1 cut(s)	344
BsaXI	ACNNNNNCTCC	4 cut(s)	83, 113, 350, 380
Bsc4I	CCNNNNNNNGG	6 cut(s)	310, 376, 917, 1102, 1320, 1503
Bse1I	ACTGG	3 cut(s)	730, 1074, 1950
Bse3DI	GCAATG	3 cut(s)	684, 1647, 1886
Bse8I	GATNNNNATC	1 cut(s)	1002
BseAI	TCCGGA	1 cut(s)	344
BseBI	CCWGG	3 cut(s)	200, 825, 1224
BseCI	ATCGAT	1 cut(s)	129
BseDI	CCNNGG	4 cut(s)	22, 354, 1049, 1279
BseGI	GGATG	5 cut(s)	597, 988, 1263, 1329, 1531
BseJI	GATNNNNATC	1 cut(s)	1002
BseLI	CCNNNNNNNGG	6 cut(s)	310, 376, 917, 1102, 1320, 1503
BseMI	GCAATG	3 cut(s)	684, 1647, 1886
BseMII	CTCAG	4 cut(s)	233, 404, 507, 887
BseNI	ACTGG	3 cut(s)	730, 1074, 1950
BseRI	GAGGAG	4 cut(s)	497, 893, 977, 1133
BseSI	GKGCMC	1 cut(s)	163
BsgI	GTGCAG	1 cut(s)	237
Bsh1236I	CGCG	1 cut(s)	117
BshFI	GGCC	5 cut(s)	27, 224, 338, 828, 1440
BshVI	ATCGAT	1 cut(s)	129
BsiHKAI	GWGCWC	1 cut(s)	363
BsiHKCI	CYCGRG	1 cut(s)	1060
BsiSI	CCGG	4 cut(s)	345, 354, 390, 1772
BslFI	GGGAC	2 cut(s)	467, 1625
BslI	CCNNNNNNNGG	6 cut(s)	310, 376, 917, 1102, 1320, 1503
BsmAI	GTCTC	2 cut(s)	146, 875
BsmBI	CGTCTC	1 cut(s)	146
BsmFI	GGGAC	2 cut(s)	467, 1625
BsmI	GAATGC	1 cut(s)	1396
BsnI	GGCC	5 cut(s)	27, 224, 338, 828, 1440
BsoBI	CYCGRG	1 cut(s)	1060
Bsp1286I	GDGCHC	3 cut(s)	163, 363, 1097
Bsp13I	TCCGGA	1 cut(s)	344
Bsp143I	GATC	4 cut(s)	1003, 1064, 1362, 1921
Bsp19I	CCATGG	2 cut(s)	1049, 1279
BspANI	GGCC	5 cut(s)	27, 224, 338, 828, 1440
BspCNI	CTCAG	4 cut(s)	232, 405, 508, 888
BspDI	ATCGAT	1 cut(s)	129
BspEI	TCCGGA	1 cut(s)	344
BspFNI	CGCG	1 cut(s)	117
BspHI	TCATGA	1 cut(s)	534
BspLI	GGNNCC	1 cut(s)	1094
BspQI	GCTCTTC	1 cut(s)	343
BsrBI	CCGCTC	1 cut(s)	231
BsrDI	GCAATG	3 cut(s)	684, 1647, 1886
BsrI	ACTGG	3 cut(s)	730, 1074, 1950
BssECI	CCNNGG	4 cut(s)	22, 354, 1049, 1279
BssMI	GATC	4 cut(s)	1003, 1064, 1362, 1921
BssT1I	CCWWGG	2 cut(s)	1049, 1279
Bst2UI	CCWGG	3 cut(s)	200, 825, 1224
Bst4CI	ACNGT	8 cut(s)	313, 331, 566, 634, 819, 1249, 1624, 1909
Bst6I	CTCTTC	4 cut(s)	343, 882, 1530, 1842
BstC8I	GCNNGC	5 cut(s)	76, 441, 754, 1012, 1276
BstDEI	CTNAG	5 cut(s)	219, 413, 516, 896, 1163
BstDSI	CCRYGG	3 cut(s)	22, 1049, 1279
BstENI	CCTNNNNNAGG	1 cut(s)	374
BstF5I	GGATG	5 cut(s)	597, 988, 1263, 1329, 1531
BstFNI	CGCG	1 cut(s)	117
BstH2I	RGCGCY	1 cut(s)	611
BstHHI	GCGC	4 cut(s)	119, 515, 610, 720
BstKTI	GATC	4 cut(s)	1006, 1067, 1365, 1924
BstMAI	GTCTC	2 cut(s)	146, 875
BstMBI	GATC	4 cut(s)	1003, 1064, 1362, 1921
BstNI	CCWGG	3 cut(s)	200, 825, 1224
BstNSI	RCATGY	1 cut(s)	1289
BstSCI	CCNGG	5 cut(s)	198, 353, 389, 823, 1222
BstSFI	CTRYAG	1 cut(s)	1842
BstSLI	GKGCMC	1 cut(s)	163
BstUI	CGCG	1 cut(s)	117
BstV2I	GAAGAC	1 cut(s)	1752
Bsu15I	ATCGAT	1 cut(s)	129
BsuRI	GGCC	5 cut(s)	27, 224, 338, 828, 1440
BsuTUI	ATCGAT	1 cut(s)	129
BtgI	CCRYGG	3 cut(s)	22, 1049, 1279
BtrI	CACGTC	1 cut(s)	457
BtsCI	GGATG	5 cut(s)	597, 988, 1263, 1329, 1531
BtsI	GCAGTG	2 cut(s)	163, 440
BtsIMutI	CAGTG	3 cut(s)	163, 440, 1067
Cac8I	GCNNGC	5 cut(s)	76, 441, 754, 1012, 1276
CciI	TCATGA	1 cut(s)	534
CfoI	GCGC	4 cut(s)	119, 515, 610, 720
Cfr13I	GGNCC	2 cut(s)	223, 1439
ClaI	ATCGAT	1 cut(s)	129
CseI	GACGC	2 cut(s)	1406, 1784
Csp6I	GTAC	3 cut(s)	367, 1529, 1688
CspCI	CAANNNNNGTGG	2 cut(s)	1869, 1904
CviQI	GTAC	3 cut(s)	367, 1529, 1688
DdeI	CTNAG	5 cut(s)	219, 413, 516, 896, 1163
DpnI	GATC	4 cut(s)	1005, 1066, 1364, 1923
DpnII	GATC	4 cut(s)	1003, 1064, 1362, 1921
DraI	TTTAAA	2 cut(s)	1174, 1684
EaeI	YGGCCR	2 cut(s)	336, 826
Eam1104I	CTCTTC	4 cut(s)	343, 882, 1530, 1842
EarI	CTCTTC	4 cut(s)	343, 882, 1530, 1842
Ecl136II	GAGCTC	1 cut(s)	361
Eco130I	CCWWGG	2 cut(s)	1049, 1279
Eco24I	GRGCYC	2 cut(s)	363, 1097
Eco32I	GATATC	1 cut(s)	1567
Eco53kI	GAGCTC	1 cut(s)	361
Eco57I	CTGAAG	2 cut(s)	906, 1427
Eco88I	CYCGRG	1 cut(s)	1060
EcoICRI	GAGCTC	1 cut(s)	361
EcoNI	CCTNNNNNAGG	1 cut(s)	374
EcoO109I	RGGNCCY	1 cut(s)	223
EcoRII	CCWGG	3 cut(s)	198, 823, 1222
EcoRV	GATATC	1 cut(s)	1567
EcoT14I	CCWWGG	2 cut(s)	1049, 1279
EcoT22I	ATGCAT	4 cut(s)	6, 300, 1522, 1593
EcoT38I	GRGCYC	2 cut(s)	363, 1097
ErhI	CCWWGG	2 cut(s)	1049, 1279
Esp3I	CGTCTC	1 cut(s)	146
FalI	AAGNNNNNCTT	4 cut(s)	594, 626, 1779, 1811
FaqI	GGGAC	2 cut(s)	467, 1625
FauI	CCCGC	4 cut(s)	570, 798, 859, 1496
FauNDI	CATATG	2 cut(s)	648, 1901
FbaI	TGATCA	2 cut(s)	1003, 1362
FokI	GGATG	5 cut(s)	604, 995, 1270, 1336, 1538
FriOI	GRGCYC	2 cut(s)	363, 1097
FspBI	CTAG	2 cut(s)	588, 1029
GlaI	GCGC	4 cut(s)	118, 514, 609, 719
GsuI	CTGGAG	1 cut(s)	1933
HaeII	RGCGCY	1 cut(s)	611
HaeIII	GGCC	5 cut(s)	27, 224, 338, 828, 1440
HapII	CCGG	4 cut(s)	345, 354, 390, 1772
HgaI	GACGC	2 cut(s)	1406, 1784
HhaI	GCGC	4 cut(s)	119, 515, 610, 720
Hin6I	GCGC	4 cut(s)	117, 513, 608, 718
HinP1I	GCGC	4 cut(s)	117, 513, 608, 718
HpaII	CCGG	4 cut(s)	345, 354, 390, 1772
HphI	GGTGA	5 cut(s)	40, 47, 646, 664, 724
Hpy166II	GTNNAC	1 cut(s)	1137
Hpy188I	TCNGA	7 cut(s)	402, 499, 615, 897, 1407, 1461, 1516
Hpy188III	TCNNGA	6 cut(s)	345, 535, 860, 925, 1384, 1570
Hpy8I	GTNNAC	1 cut(s)	1137
HpyAV	CCTTC	6 cut(s)	553, 596, 1010, 1402, 1807, 1811
HpyCH4III	ACNGT	8 cut(s)	313, 331, 566, 634, 819, 1249, 1624, 1909
HpyCH4IV	ACGT	2 cut(s)	405, 456
HpyF3I	CTNAG	5 cut(s)	219, 413, 516, 896, 1163
HpySE526I	ACGT	2 cut(s)	405, 456
HspAI	GCGC	4 cut(s)	117, 513, 608, 718
Kpn2I	TCCGGA	1 cut(s)	344
Ksp22I	TGATCA	2 cut(s)	1003, 1362
Kzo9I	GATC	4 cut(s)	1003, 1064, 1362, 1921
LguI	GCTCTTC	1 cut(s)	343
LmnI	GCTCC	5 cut(s)	153, 241, 358, 1092, 1327
LweI	GCATC	6 cut(s)	973, 1452, 1507, 1578, 1600, 1660
MaeI	CTAG	2 cut(s)	588, 1029
MaeII	ACGT	2 cut(s)	405, 456
MaeIII	GTNAC	2 cut(s)	214, 1895
MalI	GATC	4 cut(s)	1005, 1066, 1364, 1923
MbiI	CCGCTC	1 cut(s)	231
MboI	GATC	4 cut(s)	1003, 1064, 1362, 1921
MboII	GAAGA	9 cut(s)	360, 461, 611, 899, 1399, 1547, 1757, 1859, 1868
MhlI	GDGCHC	3 cut(s)	163, 363, 1097
MlsI	TGGCCA	1 cut(s)	338
MluNI	TGGCCA	1 cut(s)	338
MlyI	GAGTC	7 cut(s)	55, 189, 242, 287, 527, 1668, 1813
MmeI	TCCRAC	4 cut(s)	306, 477, 828, 1070
Mox20I	TGGCCA	1 cut(s)	338
Mph1103I	ATGCAT	4 cut(s)	6, 300, 1522, 1593
MroI	TCCGGA	1 cut(s)	344
MroXI	GAANNNNTTC	2 cut(s)	855, 891
MscI	TGGCCA	1 cut(s)	338
MseI	TTAA	7 cut(s)	264, 690, 783, 1043, 1173, 1319, 1683
MslI	CAYNNNNRTG	2 cut(s)	533, 1284
Msp20I	TGGCCA	1 cut(s)	338
MspA1I	CMGCKG	3 cut(s)	245, 1841, 1967
MspI	CCGG	4 cut(s)	345, 354, 390, 1772
MspR9I	CCNGG	5 cut(s)	200, 355, 391, 825, 1224
Mva1269I	GAATGC	1 cut(s)	1396
MvaI	CCWGG	3 cut(s)	200, 825, 1224
MvnI	CGCG	1 cut(s)	117
NciI	CCSGG	2 cut(s)	355, 391
NcoI	CCATGG	2 cut(s)	1049, 1279
NdeI	CATATG	2 cut(s)	648, 1901
NdeII	GATC	4 cut(s)	1003, 1064, 1362, 1921
NlaIV	GGNNCC	1 cut(s)	1094
NmeAIII	GCCGAG	1 cut(s)	854
NmuCI	GTSAC	2 cut(s)	214, 1895
NsiI	ATGCAT	4 cut(s)	6, 300, 1522, 1593
NspI	RCATGY	1 cut(s)	1289
PagI	TCATGA	1 cut(s)	534
PciSI	GCTCTTC	1 cut(s)	343
PcsI	WCGNNNNNNNCGW	1 cut(s)	317
PctI	GAATGC	1 cut(s)	1396
PdmI	GAANNNNTTC	2 cut(s)	855, 891
PfeI	GAWTC	6 cut(s)	131, 203, 921, 1159, 1511, 1693
PfoI	TCCNGGA	1 cut(s)	198
PleI	GAGTC	7 cut(s)	55, 189, 242, 286, 526, 1667, 1812
PpsI	GAGTC	7 cut(s)	55, 189, 242, 286, 526, 1667, 1812
PsiI	TTATAA	1 cut(s)	525
Psp124BI	GAGCTC	1 cut(s)	363
Psp1406I	AACGTT	1 cut(s)	405
Psp6I	CCWGG	3 cut(s)	198, 823, 1222
PspGI	CCWGG	3 cut(s)	198, 823, 1222
PspN4I	GGNNCC	1 cut(s)	1094
PspPI	GGNCC	2 cut(s)	223, 1439
PvuII	CAGCTG	1 cut(s)	1967
RsaI	GTAC	3 cut(s)	368, 1530, 1689
RsaNI	GTAC	3 cut(s)	367, 1529, 1688
RseI	CAYNNNNRTG	2 cut(s)	533, 1284
SacI	GAGCTC	1 cut(s)	363
SapI	GCTCTTC	1 cut(s)	343
SaqAI	TTAA	7 cut(s)	264, 690, 783, 1043, 1173, 1319, 1683
Sau3AI	GATC	4 cut(s)	1003, 1064, 1362, 1921
Sau96I	GGNCC	2 cut(s)	223, 1439
ScaI	AGTACT	1 cut(s)	1689
SchI	GAGTC	7 cut(s)	55, 189, 242, 287, 527, 1668, 1813
ScrFI	CCNGG	5 cut(s)	200, 355, 391, 825, 1224
SduI	GDGCHC	3 cut(s)	163, 363, 1097
SfaNI	GCATC	6 cut(s)	973, 1452, 1507, 1578, 1600, 1660
SfcI	CTRYAG	1 cut(s)	1842
SmiMI	CAYNNNNRTG	2 cut(s)	533, 1284
SmlI	CTYRAG	6 cut(s)	143, 275, 362, 794, 1546, 1750
SmoI	CTYRAG	6 cut(s)	143, 275, 362, 794, 1546, 1750
SspMI	CTAG	2 cut(s)	588, 1029
SstI	GAGCTC	1 cut(s)	363
StyD4I	CCNGG	5 cut(s)	198, 353, 389, 823, 1222
StyI	CCWWGG	2 cut(s)	1049, 1279
TaaI	ACNGT	8 cut(s)	313, 331, 566, 634, 819, 1249, 1624, 1909
TaiI	ACGT	2 cut(s)	408, 459
TaqI	TCGA	2 cut(s)	129, 1385
TatI	WGTACW	2 cut(s)	1528, 1687
TauI	GCSGC	1 cut(s)	1841
TfiI	GAWTC	6 cut(s)	131, 203, 921, 1159, 1511, 1693
Tru1I	TTAA	7 cut(s)	264, 690, 783, 1043, 1173, 1319, 1683
Tru9I	TTAA	7 cut(s)	264, 690, 783, 1043, 1173, 1319, 1683
TscAI	CASTG	3 cut(s)	163, 440, 1074
TseFI	GTSAC	2 cut(s)	214, 1895
Tsp45I	GTSAC	2 cut(s)	214, 1895
TspDTI	ATGAA	5 cut(s)	282, 283, 305, 437, 1464
TspGWI	ACGGA	1 cut(s)	1501
TspRI	CASTG	3 cut(s)	163, 440, 1074
XagI	CCTNNNNNAGG	1 cut(s)	374
XapI	RAATTY	6 cut(s)	855, 1127, 1196, 1450, 1756, 1762
XceI	RCATGY	1 cut(s)	1289
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1321, 1577
XmnI	GAANNNNTTC	2 cut(s)	855, 891
XspI	CTAG	2 cut(s)	588, 1029
ZrmI	AGTACT	1 cut(s)	1689
Zsp2I	ATGCAT	4 cut(s)	6, 300, 1522, 1593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.