Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0011923

Physical Location & Seq

Genomic Coordinates Reverse (-)

17575379 .. 17577364

Gene Structure 1986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g23480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGCAGTTCAAGCAACTATTTCGCAGGACAAACCTGATCAACATCCTCACCAAGCAACAAACCTGCCACTATGCTCACGATCCATTTCCCAACAAGGTCTCCCACTACCTCCACCGCGCCAAACTCATCGATTCCATTCGTCTCCGGCTCCGGTCCAACGCCCCAAACTCTCTCGCTCCGCTCGCAAACGACCGGCTTCTTGACTCCTTTGTTGTCACTCAAGCCCTCCGCTCCGCGCCCTCCGCCGATTCCGCCCTCTCCCTCGTTGAGTTTCTCGAATCAAACCCTCGTTTCGATCATACCCAGAACACGGTTCATGCCTTGGCCACAGTGCTTGCCAAGTCTCGCCGAGCTGCGGAGCTTAATTCCCTCATTGAAGCAGTTCATGCTGGGAAGTTTCGAAATGTTCGCGTCAGCTTCATGAATGTTATGCAGTGGCAGGCTGCGGTTGGAGATGTCGAGGCAGTTGTTAAAACATGGGATGAGTATAGAGTCAGCTCGGAGAAACGTGTGTGCGTGGAGTCTTATAACATTGTGATGCGCATTTTTGCGCAAATGGGAAAAGATTCAGAGGCGGTGAGGGTTTTTAGTATGATGATTGAAGAAGGGGCAATCCCGAATAGTCGGACTTATACGGTGATGATTGAGCACCTTGTGAGTTCTGGGAAGTGGAAATCTGCAATGGAGGTGTTTAATGTGCTGCCTTTGATGAGGGTGAAGCGAACTTTGAACCAGTTTTCAGTTTTGGTAGATGCATGTGTTGGTGTTGAACAGTTTGACGAGGTTGAGAATTTACTTAAAGAAATGCGGGTTGATGGGATATTGCCCGGGCGAGCTATGCGTTTGTCTTTGCAACGGATTCAAGAGGCGGGGTTTGTTCATGAGACTGATGAATTTCTAAGAGAAATGTTGCCGAATGAGGGAATCAAGAGCATAAAGTATTGTGTTGATAGCGGTGATGGTGATGACGATGACGATGAGGATAGTGGTGAGGATGCTGGTGATGATGTTGGTGGAGTCGGTGGAGTTGGTGATGTTAATGGGGTTCAGTTAAAGCCATGGTTAGACCCAAGATTATTAGCAAATGCCTTGCAAAAGTGGAACTCTGATGAGGTATCAGCATTGGAGGAGGCAAAATTTGTGTGGACTACTCGTTTAGTATGCAAGATTCTTAGGAATTTTAAATCAGCAGAAACAGCTTGGAGTTTTTTCTGTTGGGTCGCTTGTCAGCCGGGTTTTACTCATGATATTTACACAGTACAAAGGATGATGACCCTTTTAGCACGCCATGGGCTTTCTGAATTGGTTGACCAACTATTAAACAAAATAAGGATTGAGCAAATGAGATTGCCCTTCTGCACTATCAGGTTGATCATTGATTTTTATGGTATCTCAAAGGAAGCTGACGCTGCTCTGAAGGTCTTTCACGATGATAGAAACCTGTGTGGCCCTATATCGAACTTTAATTTGATGCTTCTGTATTCCTCTCTTTTACGAACATTGACCAAGTGCGGGAGGGATTCTGATGCATTGGATGTGCTTGAAGAGATGATTATGTCTGGGATTGTTCCCGATATCCAGACGTTTTCAGGGTTGATGCATCATTTTGCACTAAATGCGGACATCAAAACTGTGCAGAAACTGTTTGCAATGGTTAGGCAGAGTGGAGTTCAGCCAGATGCTTATATGTTTAAAGTCCTGATCCAAGCATATTGCAAGTGTGGGAGAGCTGCTCTTGCATGGCGGGTTTTTGAAGACCTACGGAATTTAAAGTTGGTGCCTGACGCCGCCACAAAAGAGCTGCTTGTAAAGAGTCTTTGGAAGGAAGGAAAGCGGAGAGAGGCTGCCGCGGTGGAAGAGAGTTGTGAGGAAGTAAGTGACGCCCTTCCGCTCACATTGCGCGGCCACTTATGGACGGTAAGCTCTGCTGATCTTACAAAAGTTTTTTCTATTTACTCAAATGGTTTCTTATCAGCTGGCGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

662

Amino Acids

74.47

Weight (kDa)

6.15

Isoelectric Point (pI)

38.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	172 - 218	2.9e-09	PPR repeat family
PPR_2	PF13041	494 - 537	8.4e-06	PPR repeat family
PPR_2	PF13041	559 - 606	1.4e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66631
fragaria_vesca	FvH4_1g14280 FvH4_2g07140
malus_domestica	MD02G1156600.v1.1 MD15G1270900.v1.1
prunus_persica	Prupe.7G147200_v2.0.a1
pyrus_communis	pycom15g23480
rosa_chinensis	RchiOBHm_Chr2g0102871 RchiOBHm_Chr2g0102951
rosa_laevigata	RLG00000017190
rosa_multiflora	Rmu_sc0000388.1_g000043
rosa_roxburghii	Rroxscaffold_2G00140070 Rroxscaffold_2G00140200
rosa_rugosa	Rorug02G0110600
rosa_samantha	Rh2AG158900 Rh2BG165300 Rh2CG165500 Rh2DG164100
rosa_wichuraiana	Rw2G012420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	528
Acc16I	TGCGCA	2 cut(s)	542, 552
Acc36I	ACCTGC	1 cut(s)	71
AccB1I	GGYRCC	1 cut(s)	1777
AccBSI	CCGCTC	3 cut(s)	181, 231, 1891
AccII	CGCG	5 cut(s)	117, 236, 411, 1850, 1902
AclWI	GGATC	2 cut(s)	74, 1696
AcoI	YGGCCR	2 cut(s)	324, 1903
AcsI	RAATTY	5 cut(s)	790, 893, 1136, 1177, 1765
AcuI	CTGAAG	1 cut(s)	1436
AcyI	GRCGYC	2 cut(s)	1785, 1881
AdeI	CACNNNGTG	1 cut(s)	655
AfaI	GTAC	1 cut(s)	1260
AfiI	CCNNNNNNNGG	4 cut(s)	310, 355, 920, 1512
AflIII	ACRYGT	1 cut(s)	508
AgsI	TTSAA	8 cut(s)	10, 377, 602, 730, 770, 863, 1544, 1754
AjuI	GAANNNNNNNTTGG	2 cut(s)	1757, 1789
Alw21I	GWGCWC	1 cut(s)	651
Alw26I	GTCTC	4 cut(s)	103, 146, 348, 878
AlwI	GGATC	2 cut(s)	74, 1696
AlwNI	CAGNNNCTG	1 cut(s)	1642
Ama87I	CYCGRG	1 cut(s)	827
AoxI	GGCC	3 cut(s)	324, 1447, 1903
ApeKI	GCWGC	7 cut(s)	353, 443, 700, 1409, 1730, 1801, 1844
ApoI	RAATTY	5 cut(s)	790, 893, 1136, 1177, 1765
Asp700I	GAANNNNTTC	2 cut(s)	381, 565
AspLEI	GCGC	5 cut(s)	119, 238, 543, 553, 1902
AspS9I	GGNCC	2 cut(s)	153, 1448
AsuC2I	CCSGG	3 cut(s)	828, 829, 1233
AsuHPI	GGTGA	9 cut(s)	40, 589, 649, 727, 968, 974, 1001, 1013, 1043
AsuII	TTCGAA	1 cut(s)	400
AvaI	CYCGRG	1 cut(s)	827
AvaII	GGWCC	1 cut(s)	153
BalI	TGGCCA	1 cut(s)	326
BanI	GGYRCC	1 cut(s)	1777
BbsI	GAAGAC	1 cut(s)	1761
Bbv12I	GWGCWC	1 cut(s)	651
BbvI	GCAGC	7 cut(s)	340, 430, 687, 1396, 1717, 1788, 1831
BccI	CCATC	2 cut(s)	809, 953
BcgI	CGANNNNNNTGC	1 cut(s)	36
BclI	TGATCA	2 cut(s)	36, 1371
BcnI	CCSGG	3 cut(s)	828, 829, 1233
BcoDI	GTCTC	4 cut(s)	103, 146, 348, 878
BfuAI	ACCTGC	1 cut(s)	71
Bme1390I	CCNGG	3 cut(s)	828, 829, 1233
Bme18I	GGWCC	1 cut(s)	153
BmeT110I	CYCGRG	1 cut(s)	827
BmgT120I	GGNCC	2 cut(s)	153, 1448
BmiI	GGNNCC	2 cut(s)	149, 1779
BmrFI	CCNGG	3 cut(s)	828, 829, 1233
BmsI	GCATC	8 cut(s)	528, 742, 985, 1461, 1516, 1587, 1609, 1669
BpiI	GAAGAC	1 cut(s)	1761
BplI	GAGNNNNNCTC	2 cut(s)	1717, 1749
Bpu14I	TTCGAA	1 cut(s)	400
BpuEI	CTTGAG	1 cut(s)	204
BpuMI	CCSGG	3 cut(s)	828, 829, 1233
Bsa29I	ATCGAT	1 cut(s)	129
BsaBI	GATNNNNATC	1 cut(s)	41
BsaHI	GRCGYC	2 cut(s)	1785, 1881
BsaI	GGTCTC	1 cut(s)	103
BsaJI	CCNNGG	5 cut(s)	321, 827, 1058, 1288, 1848
BsaWI	WCCGGW	1 cut(s)	150
BsaXI	ACNNNNNCTCC	2 cut(s)	83, 113
Bsc4I	CCNNNNNNNGG	4 cut(s)	310, 355, 920, 1512
Bse118I	RCCGGY	1 cut(s)	192
Bse1I	ACTGG	1 cut(s)	733
Bse3DI	GCAATG	3 cut(s)	687, 1656, 1895
Bse8I	GATNNNNATC	1 cut(s)	41
BseCI	ATCGAT	1 cut(s)	129
BseDI	CCNNGG	5 cut(s)	321, 827, 1058, 1288, 1848
BseGI	GGATG	5 cut(s)	42, 487, 1000, 1272, 1540
BseJI	GATNNNNATC	1 cut(s)	41
BseLI	CCNNNNNNNGG	4 cut(s)	310, 355, 920, 1512
BseMI	GCAATG	3 cut(s)	687, 1656, 1895
BseNI	ACTGG	1 cut(s)	733
BseRI	GAGGAG	1 cut(s)	1142
BseXI	GCAGC	7 cut(s)	340, 430, 687, 1396, 1717, 1788, 1831
BseYI	CCCAGC	1 cut(s)	389
BsgI	GTGCAG	2 cut(s)	1342, 1655
Bsh1236I	CGCG	5 cut(s)	117, 236, 411, 1850, 1902
Bsh1285I	CGRYCG	1 cut(s)	193
BshFI	GGCC	3 cut(s)	326, 1449, 1905
BshNI	GGYRCC	1 cut(s)	1777
BshVI	ATCGAT	1 cut(s)	129
BsiEI	CGRYCG	1 cut(s)	193
BsiHKAI	GWGCWC	1 cut(s)	651
BsiHKCI	CYCGRG	1 cut(s)	827
BsiSI	CCGG	5 cut(s)	145, 151, 193, 828, 1232
BslI	CCNNNNNNNGG	4 cut(s)	310, 355, 920, 1512
BsmAI	GTCTC	4 cut(s)	103, 146, 348, 878
BsmBI	CGTCTC	1 cut(s)	146
BsnI	GGCC	3 cut(s)	326, 1449, 1905
Bso31I	GGTCTC	1 cut(s)	103
BsoBI	CYCGRG	1 cut(s)	827
Bsp119I	TTCGAA	1 cut(s)	400
Bsp1286I	GDGCHC	1 cut(s)	651
Bsp143I	GATC	6 cut(s)	36, 79, 295, 1371, 1701, 1930
Bsp19I	CCATGG	2 cut(s)	1058, 1288
BspANI	GGCC	3 cut(s)	326, 1449, 1905
BspDI	ATCGAT	1 cut(s)	129
BspFNI	CGCG	5 cut(s)	117, 236, 411, 1850, 1902
BspHI	TCATGA	3 cut(s)	420, 880, 1243
BspLI	GGNNCC	2 cut(s)	149, 1779
BspMI	ACCTGC	1 cut(s)	71
BspPI	GGATC	2 cut(s)	74, 1696
BspT104I	TTCGAA	1 cut(s)	400
BspT107I	GGYRCC	1 cut(s)	1777
BspTNI	GGTCTC	1 cut(s)	103
BsrBI	CCGCTC	3 cut(s)	181, 231, 1891
BsrDI	GCAATG	3 cut(s)	687, 1656, 1895
BsrFI	RCCGGY	1 cut(s)	192
BsrI	ACTGG	1 cut(s)	733
BssAI	RCCGGY	1 cut(s)	192
BssECI	CCNNGG	5 cut(s)	321, 827, 1058, 1288, 1848
BssMI	GATC	6 cut(s)	36, 79, 295, 1371, 1701, 1930
BssNI	GRCGYC	2 cut(s)	1785, 1881
BssT1I	CCWWGG	3 cut(s)	321, 1058, 1288
Bst4CI	ACNGT	8 cut(s)	313, 331, 637, 774, 1258, 1633, 1644, 1918
Bst6I	CTCTTC	2 cut(s)	1539, 1851
BstACI	GRCGYC	2 cut(s)	1785, 1881
BstAPI	GCANNNNNTGC	2 cut(s)	386, 1616
BstBI	TTCGAA	1 cut(s)	400
BstC8I	GCNNGC	6 cut(s)	183, 336, 441, 834, 1285, 1978
BstDEI	CTNAG	2 cut(s)	899, 1172
BstDSI	CCRYGG	3 cut(s)	1058, 1288, 1848
BstF5I	GGATG	5 cut(s)	42, 487, 1000, 1272, 1540
BstFNI	CGCG	5 cut(s)	117, 236, 411, 1850, 1902
BstHHI	GCGC	5 cut(s)	119, 238, 543, 553, 1902
BstKTI	GATC	6 cut(s)	39, 82, 298, 1374, 1704, 1933
BstMAI	GTCTC	4 cut(s)	103, 146, 348, 878
BstMBI	GATC	6 cut(s)	36, 79, 295, 1371, 1701, 1930
BstMCI	CGRYCG	1 cut(s)	193
BstNSI	RCATGY	1 cut(s)	759
BstSCI	CCNGG	3 cut(s)	826, 827, 1231
BstUI	CGCG	5 cut(s)	117, 236, 411, 1850, 1902
BstV1I	GCAGC	7 cut(s)	340, 430, 687, 1396, 1717, 1788, 1831
BstV2I	GAAGAC	1 cut(s)	1761
Bsu15I	ATCGAT	1 cut(s)	129
BsuRI	GGCC	3 cut(s)	326, 1449, 1905
BsuTUI	ATCGAT	1 cut(s)	129
BtgI	CCRYGG	3 cut(s)	1058, 1288, 1848
BtsCI	GGATG	5 cut(s)	42, 487, 1000, 1272, 1540
BtsI	GCAGTG	1 cut(s)	440
BtsIMutI	CAGTG	2 cut(s)	336, 440
BveI	ACCTGC	1 cut(s)	71
Cac8I	GCNNGC	6 cut(s)	183, 336, 441, 834, 1285, 1978
CaiI	CAGNNNCTG	1 cut(s)	1642
CciI	TCATGA	3 cut(s)	420, 880, 1243
CfoI	GCGC	5 cut(s)	119, 238, 543, 553, 1902
Cfr10I	RCCGGY	1 cut(s)	192
Cfr13I	GGNCC	2 cut(s)	153, 1448
Cfr42I	CCGCGG	1 cut(s)	1851
Cfr9I	CCCGGG	1 cut(s)	827
ClaI	ATCGAT	1 cut(s)	129
CseI	GACGC	4 cut(s)	400, 1415, 1793, 1889
Csp6I	GTAC	1 cut(s)	1259
CspCI	CAANNNNNGTGG	2 cut(s)	316, 351
CviQI	GTAC	1 cut(s)	1259
DdeI	CTNAG	2 cut(s)	899, 1172
DpnI	GATC	6 cut(s)	38, 81, 297, 1373, 1703, 1932
DpnII	GATC	6 cut(s)	36, 79, 295, 1371, 1701, 1930
DraI	TTTAAA	3 cut(s)	1183, 1693, 1770
DraIII	CACNNNGTG	1 cut(s)	655
EaeI	YGGCCR	2 cut(s)	324, 1903
Eam1104I	CTCTTC	2 cut(s)	1539, 1851
EarI	CTCTTC	2 cut(s)	1539, 1851
EciI	GGCGGA	2 cut(s)	232, 241
Eco130I	CCWWGG	3 cut(s)	321, 1058, 1288
Eco31I	GGTCTC	1 cut(s)	103
Eco32I	GATATC	1 cut(s)	1576
Eco47I	GGWCC	1 cut(s)	153
Eco57I	CTGAAG	1 cut(s)	1436
Eco88I	CYCGRG	1 cut(s)	827
EcoRV	GATATC	1 cut(s)	1576
EcoT14I	CCWWGG	3 cut(s)	321, 1058, 1288
EcoT22I	ATGCAT	3 cut(s)	757, 1531, 1602
ErhI	CCWWGG	3 cut(s)	321, 1058, 1288
Esp3I	CGTCTC	1 cut(s)	146
FalI	AAGNNNNNCTT	2 cut(s)	1788, 1820
FauI	CCCGC	5 cut(s)	801, 862, 1505, 1737, 1973
FbaI	TGATCA	2 cut(s)	36, 1371
FokI	GGATG	5 cut(s)	29, 494, 1007, 1279, 1547
FspAI	RTGCGCAY	1 cut(s)	542
FspI	TGCGCA	2 cut(s)	542, 552
GlaI	GCGC	5 cut(s)	118, 237, 542, 552, 1901
GsaI	CCCAGC	1 cut(s)	393
HaeIII	GGCC	3 cut(s)	326, 1449, 1905
HapII	CCGG	5 cut(s)	145, 151, 193, 828, 1232
HgaI	GACGC	4 cut(s)	400, 1415, 1793, 1889
HhaI	GCGC	5 cut(s)	119, 238, 543, 553, 1902
Hin1I	GRCGYC	2 cut(s)	1785, 1881
Hin6I	GCGC	5 cut(s)	117, 236, 541, 551, 1900
HinP1I	GCGC	5 cut(s)	117, 236, 541, 551, 1900
HincII	GTYRAC	1 cut(s)	1309
HindII	GTYRAC	1 cut(s)	1309
HpaII	CCGG	5 cut(s)	145, 151, 193, 828, 1232
HphI	GGTGA	9 cut(s)	40, 589, 649, 727, 968, 974, 1001, 1013, 1043
Hpy166II	GTNNAC	2 cut(s)	1146, 1309
Hpy188I	TCNGA	7 cut(s)	502, 571, 627, 1108, 1300, 1416, 1525
Hpy8I	GTNNAC	2 cut(s)	1146, 1309
HpyAV	CCTTC	6 cut(s)	599, 1363, 1411, 1816, 1820, 1895
HpyCH4III	ACNGT	8 cut(s)	313, 331, 637, 774, 1258, 1633, 1644, 1918
HpyCH4IV	ACGT	2 cut(s)	508, 1583
HpyF3I	CTNAG	2 cut(s)	899, 1172
HpySE526I	ACGT	2 cut(s)	508, 1583
Hsp92I	GRCGYC	2 cut(s)	1785, 1881
HspAI	GCGC	5 cut(s)	117, 236, 541, 551, 1900
Ksp22I	TGATCA	2 cut(s)	36, 1371
KspI	CCGCGG	1 cut(s)	1851
Kzo9I	GATC	6 cut(s)	36, 79, 295, 1371, 1701, 1930
LmnI	GCTCC	4 cut(s)	153, 181, 236, 358
Lsp1109I	GCAGC	7 cut(s)	340, 430, 687, 1396, 1717, 1788, 1831
LweI	GCATC	8 cut(s)	528, 742, 985, 1461, 1516, 1587, 1609, 1669
MaeII	ACGT	2 cut(s)	508, 1583
MaeIII	GTNAC	2 cut(s)	214, 1877
MalI	GATC	6 cut(s)	38, 81, 297, 1373, 1703, 1932
MbiI	CCGCTC	3 cut(s)	181, 231, 1891
MboI	GATC	6 cut(s)	36, 79, 295, 1371, 1701, 1930
MboII	GAAGA	4 cut(s)	614, 1556, 1766, 1868
MhlI	GDGCHC	1 cut(s)	651
MlsI	TGGCCA	1 cut(s)	326
MluCI	AATT	8 cut(s)	364, 790, 893, 1136, 1177, 1301, 1465, 1765
MluNI	TGGCCA	1 cut(s)	326
MlyI	GAGTC	5 cut(s)	197, 501, 530, 1026, 1822
MmeI	TCCRAC	3 cut(s)	180, 430, 605
Mox20I	TGGCCA	1 cut(s)	326
Mph1103I	ATGCAT	3 cut(s)	757, 1531, 1602
MroXI	GAANNNNTTC	2 cut(s)	381, 565
MscI	TGGCCA	1 cut(s)	326
MslI	CAYNNNNRTG	1 cut(s)	536
Msp20I	TGGCCA	1 cut(s)	326
MspA1I	CMGCKG	2 cut(s)	1850, 1976
MspI	CCGG	5 cut(s)	145, 151, 193, 828, 1232
MspR9I	CCNGG	3 cut(s)	828, 829, 1233
MvnI	CGCG	5 cut(s)	117, 236, 411, 1850, 1902
NciI	CCSGG	3 cut(s)	828, 829, 1233
NcoI	CCATGG	2 cut(s)	1058, 1288
NdeII	GATC	6 cut(s)	36, 79, 295, 1371, 1701, 1930
NlaIV	GGNNCC	2 cut(s)	149, 1779
NmeAIII	GCCGAG	1 cut(s)	374
NmuCI	GTSAC	2 cut(s)	214, 1877
NsbI	TGCGCA	2 cut(s)	542, 552
NsiI	ATGCAT	3 cut(s)	757, 1531, 1602
NspI	RCATGY	1 cut(s)	759
NspV	TTCGAA	1 cut(s)	400
PagI	TCATGA	3 cut(s)	420, 880, 1243
PdmI	GAANNNNTTC	2 cut(s)	381, 565
PfeI	GAWTC	8 cut(s)	131, 248, 278, 566, 859, 924, 1168, 1520
PleI	GAGTC	5 cut(s)	197, 500, 529, 1025, 1821
PpsI	GAGTC	5 cut(s)	197, 500, 529, 1025, 1821
PsiI	TTATAA	1 cut(s)	528
PspFI	CCCAGC	1 cut(s)	389
PspN4I	GGNNCC	2 cut(s)	149, 1779
PspPI	GGNCC	2 cut(s)	153, 1448
PstNI	CAGNNNCTG	1 cut(s)	1642
PvuII	CAGCTG	1 cut(s)	1976
RsaI	GTAC	1 cut(s)	1260
RsaNI	GTAC	1 cut(s)	1259
RseI	CAYNNNNRTG	1 cut(s)	536
SacII	CCGCGG	1 cut(s)	1851
Sau3AI	GATC	6 cut(s)	36, 79, 295, 1371, 1701, 1930
Sau96I	GGNCC	2 cut(s)	153, 1448
SchI	GAGTC	5 cut(s)	197, 501, 530, 1026, 1822
ScrFI	CCNGG	3 cut(s)	828, 829, 1233
SduI	GDGCHC	1 cut(s)	651
SfaNI	GCATC	8 cut(s)	528, 742, 985, 1461, 1516, 1587, 1609, 1669
Sfr303I	CCGCGG	1 cut(s)	1851
SfuI	TTCGAA	1 cut(s)	400
SgrBI	CCGCGG	1 cut(s)	1851
SinI	GGWCC	1 cut(s)	153
SmaI	CCCGGG	1 cut(s)	829
SmiMI	CAYNNNNRTG	1 cut(s)	536
SmlI	CTYRAG	1 cut(s)	219
SmoI	CTYRAG	1 cut(s)	219
SrfI	GCCCGGGC	1 cut(s)	829
Sse9I	AATT	8 cut(s)	364, 790, 893, 1136, 1177, 1301, 1465, 1765
StyD4I	CCNGG	3 cut(s)	826, 827, 1231
StyI	CCWWGG	3 cut(s)	321, 1058, 1288
TaaI	ACNGT	8 cut(s)	313, 331, 637, 774, 1258, 1633, 1644, 1918
TaiI	ACGT	2 cut(s)	511, 1586
TaqI	TCGA	6 cut(s)	129, 276, 294, 400, 459, 1457
TasI	AATT	8 cut(s)	364, 790, 893, 1136, 1177, 1301, 1465, 1765
TatI	WGTACW	1 cut(s)	1258
TauI	GCSGC	3 cut(s)	1790, 1850, 1905
TfiI	GAWTC	8 cut(s)	131, 248, 278, 566, 859, 924, 1168, 1520
TscAI	CASTG	2 cut(s)	336, 440
TseFI	GTSAC	2 cut(s)	214, 1877
TseI	GCWGC	7 cut(s)	353, 443, 700, 1409, 1730, 1801, 1844
Tsp45I	GTSAC	2 cut(s)	214, 1877
TspDTI	ATGAA	6 cut(s)	305, 374, 409, 437, 869, 906
TspGWI	ACGGA	2 cut(s)	871, 1777
TspMI	CCCGGG	1 cut(s)	827
TspRI	CASTG	2 cut(s)	336, 440
VpaK11BI	GGWCC	1 cut(s)	153
XapI	RAATTY	5 cut(s)	790, 893, 1136, 1177, 1765
XceI	RCATGY	1 cut(s)	759
XmaI	CCCGGG	1 cut(s)	827
XmnI	GAANNNNTTC	2 cut(s)	381, 565
Zsp2I	ATGCAT	3 cut(s)	757, 1531, 1602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.