Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0011923

Physical Location & Seq

Genomic Coordinates Reverse (-)

14551825 .. 14554287

Gene Structure 2463 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG165300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGCATTTCAAGCACCTCTCCCGTGGCCTAAACCTCATCAAAACCCTCACCCATCACCAGACTCGCCCCTACGCTCGCCACCCATTTCCCAACAAGCTCTCCCACTACCTCTACCGCGCCAAACTCATCGATTCCATTCGTCTCAAGCTCCGCAGCAGTGCCCCAAACTCTCTTGCTCCTTTAGCAAATGACAGACTCCTGGATTCTTTTGTGGTCACTCAAGCCCTCCGCTCTGCTCCCTCAGCTGACTCTGCACTCTTGCTTAATGAAATGCTTGAGTCCAACCCCGACTTCATGCATACCCAGAACACGGTTCATGCGTTGGCTACTGTTCTGGCCAAGTCAGGAAGAGCCGGGGAGCTCAAGTACCTCATTGAAGCTGTCAATGCCGGGAGGTTTCGGAACGTTAGGCTGAGTTTTATGAACGTTATGCAGTGGCAAGCTGCTGCTGGGGACGTGGAGGCGGTTCTTCAAGTGTGGGAGGAGTATAGAGGGTCGGAGAAGCGTGTGTGCGCCGAGTCTTATAACATTGTCATGAGGGTTTATGCGCAAATGGGGAAGGACTGTCAGGCGGTGCGGGTTTTTTCTAGGATGATTGAAGAAGGGGCGCTTCCGAATTGTAGGACTTATACGGTGATGATTGAGCATATGGTGAATTCTGGGAAGTGGAGGTCTGCAATGGAGGTTTTTAAGGTGTTGCCTTTTATGAGGGTGAAGCGCACTTTGAGCCAGTATTTGCTTTTGGTGGAGGCGTGCGTTGGTGCGAAAAAGTTTGAGGAAGTTAAGGCTTTACTTGAGGAAATGCGGGTTGATGGACTGTTGCCTGGCCGAGCCATGCGTTTATCGTTGGAACAAATTCAAGAGGCGGGGTTTATTGAGGAGACTGAAGAGTTTCTGAGGGAAATGCTGCCTAATGAGGGAATCAAGAGTATAGGGGATTGTGATGATAGTAGTGATGATGAGGAGGATAGAGATGACGAGGATGCTGCTGCTGATGATGATGATCATGCTGGCGAAGGTAAAGAGGCTAGTGGGGTTCAGTTAAAACCGTGGTTAGACCCGAGATCACTGGCAAATGCGTTGCAAAGTTGGAGCCCTGATGAGGTATCAGCATTAGAGGAGGCAAAATTCGTGTGGACTACTCGGTTAGTATGCAAGATTCTTAGGAGTTTTAAGTCAGCAGAAACGGCTTGGAAATTCTTTTGTTGGGTTGCTTGTCAGCCAGGTTTTACCCATGATATTTACACAGTTCAAAGGATGATGACCCTTTTAGCATGCCATGGACATGCTGAATTGGTTGATAAACTTTTATCCAAAGTGAGGATGGAGCAAATGAGATTGCCCTTTTCAACAATCAGGCTGATCATTGACTTTTATGGTATCTCGAAGAATGCTGACGCTGCTCTGAAGGTCTTTCACAATGATAGAAACCTGTGTGGCCCTATATCAAATTTCAATCTGATGCTTCTGTATTCATCTCTATTACGGACATTGACCAAATGTGGGAGGGATTCTGATGCATTGGATGTACTTGAAGAGATGAGCTTGAGTGGGATTTGCCCTGATATCCAGACATTTTCTGGGTTGATGCATCATTTTGCACTAAATGGGGACATCAAAACTGTGCAAAAACTATTTGCAATGGTTAGGCAGAGTGGAGTCCAGCCAGATGCTTATATGTTTAAAGTACTGATTCAAGCATATTGTAAGTGTGAGAGAGCTGCTCTTGCATGGAGAGCTTTTGAAGACTTGAGGAATTTGAATTTGCTGCCGGATGCTGCCACAAAAGAGTTGCTTGTAAAGAGTCTTTGGAAGGAAGGCAAGCGGAGAGAGGCTGCCGCTGTAGAAGAGAGTTGCGAGGAAACAAGTGATGTTCTTCCACTCACATTGCGTGGTCACATATGGACAGTTAGCTCTGTTGATCTCTCAAAAGTTTTTTCTATTTACTCCAGTAGCTTTACATCAGCTGGTAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

658

Amino Acids

74.37

Weight (kDa)

6.32

Isoelectric Point (pI)

42.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	173 - 217	3.2e-08	PPR repeat family
PPR_3	PF13812	510 - 569	9.7e-08	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66631
fragaria_vesca	FvH4_1g14280 FvH4_2g07140
malus_domestica	MD02G1156600.v1.1 MD15G1270900.v1.1
prunus_persica	Prupe.7G147200_v2.0.a1
pyrus_communis	pycom15g23480
rosa_chinensis	RchiOBHm_Chr2g0102871 RchiOBHm_Chr2g0102951
rosa_laevigata	RLG00000017190
rosa_multiflora	Rmu_sc0000388.1_g000043
rosa_roxburghii	Rroxscaffold_2G00140070 Rroxscaffold_2G00140200
rosa_rugosa	Rorug02G0110600
rosa_samantha	Rh2AG158900 Rh2BG165300 Rh2CG165500 Rh2DG164100
rosa_wichuraiana	Rw2G012420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	525
Acc16I	TGCGCA	1 cut(s)	549
AccBSI	CCGCTC	1 cut(s)	231
AccII	CGCG	1 cut(s)	117
AclI	AACGTT	2 cut(s)	405, 426
AcoI	YGGCCR	2 cut(s)	336, 826
AcsI	RAATTY	7 cut(s)	655, 855, 1127, 1196, 1450, 1756, 1762
AcuI	CTGAAG	2 cut(s)	906, 1427
AfaI	GTAC	3 cut(s)	368, 1530, 1689
AfiI	CCNNNNNNNGG	5 cut(s)	310, 917, 1102, 1320, 1503
AjiI	CACGTC	1 cut(s)	457
AjnI	CCWGG	3 cut(s)	198, 823, 1222
AjuI	GAANNNNNNNTTGG	2 cut(s)	275, 307
Alw21I	GWGCWC	1 cut(s)	363
Alw26I	GTCTC	2 cut(s)	146, 875
Ama87I	CYCGRG	1 cut(s)	1060
AoxI	GGCC	4 cut(s)	25, 336, 826, 1438
ApoI	RAATTY	7 cut(s)	655, 855, 1127, 1196, 1450, 1756, 1762
Asp700I	GAANNNNTTC	2 cut(s)	855, 891
AspLEI	GCGC	5 cut(s)	119, 515, 550, 610, 720
AspS9I	GGNCC	1 cut(s)	1439
AsuC2I	CCSGG	2 cut(s)	355, 391
AsuHPI	GGTGA	5 cut(s)	40, 47, 646, 664, 724
AvaI	CYCGRG	1 cut(s)	1060
BaeGI	GKGCMC	1 cut(s)	163
BalI	TGGCCA	1 cut(s)	338
BanII	GRGCYC	2 cut(s)	363, 1097
BbsI	GAAGAC	1 cut(s)	1752
Bbv12I	GWGCWC	1 cut(s)	363
BbvCI	CCTCAGC	1 cut(s)	241
BccI	CCATC	3 cut(s)	60, 806, 1318
BceAI	ACGGC	1 cut(s)	1203
BcgI	CGANNNNNNTGC	2 cut(s)	968, 1002
BciT130I	CCWGG	3 cut(s)	200, 825, 1224
BclI	TGATCA	2 cut(s)	1003, 1362
BcnI	CCSGG	2 cut(s)	355, 391
BcoDI	GTCTC	2 cut(s)	146, 875
BfaI	CTAG	2 cut(s)	588, 1029
BfmI	CTRYAG	1 cut(s)	1842
BfoI	RGCGCY	1 cut(s)	611
BmcAI	AGTACT	1 cut(s)	1689
Bme1390I	CCNGG	5 cut(s)	200, 355, 391, 825, 1224
BmeT110I	CYCGRG	1 cut(s)	1060
BmgBI	CACGTC	1 cut(s)	457
BmgT120I	GGNCC	1 cut(s)	1439
BmiI	GGNNCC	1 cut(s)	1094
BmrFI	CCNGG	5 cut(s)	200, 355, 391, 825, 1224
BmsI	GCATC	7 cut(s)	973, 1452, 1507, 1578, 1600, 1660, 1765
BpiI	GAAGAC	1 cut(s)	1752
BplI	GAGNNNNNCTC	2 cut(s)	1708, 1740
BpmI	CTGGAG	1 cut(s)	1933
Bpu10I	CCTNAGC	1 cut(s)	241
BpuEI	CTTGAG	7 cut(s)	128, 204, 296, 347, 815, 1567, 1771
BpuMI	CCSGG	2 cut(s)	355, 391
Bsa29I	ATCGAT	1 cut(s)	129
BsaBI	GATNNNNATC	1 cut(s)	1002
BsaJI	CCNNGG	4 cut(s)	22, 354, 1049, 1279
BsaXI	ACNNNNNCTCC	4 cut(s)	83, 113, 350, 380
Bsc4I	CCNNNNNNNGG	5 cut(s)	310, 917, 1102, 1320, 1503
Bse1I	ACTGG	3 cut(s)	730, 1074, 1950
Bse3DI	GCAATG	3 cut(s)	684, 1647, 1886
Bse8I	GATNNNNATC	1 cut(s)	1002
BseBI	CCWGG	3 cut(s)	200, 825, 1224
BseCI	ATCGAT	1 cut(s)	129
BseDI	CCNNGG	4 cut(s)	22, 354, 1049, 1279
BseGI	GGATG	6 cut(s)	597, 988, 1263, 1329, 1531, 1780
BseJI	GATNNNNATC	1 cut(s)	1002
BseLI	CCNNNNNNNGG	5 cut(s)	310, 917, 1102, 1320, 1503
BseMI	GCAATG	3 cut(s)	684, 1647, 1886
BseMII	CTCAG	3 cut(s)	255, 404, 887
BseNI	ACTGG	3 cut(s)	730, 1074, 1950
BseRI	GAGGAG	4 cut(s)	497, 893, 977, 1133
BseSI	GKGCMC	1 cut(s)	163
BseYI	CCCAGC	1 cut(s)	449
BsgI	GTGCAG	1 cut(s)	237
Bsh1236I	CGCG	1 cut(s)	117
BshFI	GGCC	4 cut(s)	27, 338, 828, 1440
BshVI	ATCGAT	1 cut(s)	129
BsiHKAI	GWGCWC	1 cut(s)	363
BsiHKCI	CYCGRG	1 cut(s)	1060
BsiSI	CCGG	3 cut(s)	354, 390, 1772
BslFI	GGGAC	2 cut(s)	467, 1625
BslI	CCNNNNNNNGG	5 cut(s)	310, 917, 1102, 1320, 1503
BsmAI	GTCTC	2 cut(s)	146, 875
BsmBI	CGTCTC	1 cut(s)	146
BsmFI	GGGAC	2 cut(s)	467, 1625
BsmI	GAATGC	1 cut(s)	1396
BsnI	GGCC	4 cut(s)	27, 338, 828, 1440
BsoBI	CYCGRG	1 cut(s)	1060
Bsp1286I	GDGCHC	3 cut(s)	163, 363, 1097
Bsp143I	GATC	4 cut(s)	1003, 1064, 1362, 1921
Bsp19I	CCATGG	1 cut(s)	1279
BspANI	GGCC	4 cut(s)	27, 338, 828, 1440
BspCNI	CTCAG	3 cut(s)	254, 405, 888
BspDI	ATCGAT	1 cut(s)	129
BspFNI	CGCG	1 cut(s)	117
BspHI	TCATGA	1 cut(s)	534
BspLI	GGNNCC	1 cut(s)	1094
BspQI	GCTCTTC	1 cut(s)	343
BsrBI	CCGCTC	1 cut(s)	231
BsrDI	GCAATG	3 cut(s)	684, 1647, 1886
BsrI	ACTGG	3 cut(s)	730, 1074, 1950
BssECI	CCNNGG	4 cut(s)	22, 354, 1049, 1279
BssMI	GATC	4 cut(s)	1003, 1064, 1362, 1921
BssT1I	CCWWGG	1 cut(s)	1279
Bst2UI	CCWGG	3 cut(s)	200, 825, 1224
Bst4CI	ACNGT	9 cut(s)	313, 331, 566, 634, 819, 1050, 1249, 1624, 1909
Bst6I	CTCTTC	4 cut(s)	343, 882, 1530, 1842
BstC8I	GCNNGC	6 cut(s)	76, 441, 754, 1012, 1276, 1823
BstDEI	CTNAG	4 cut(s)	241, 413, 896, 1163
BstDSI	CCRYGG	3 cut(s)	22, 1049, 1279
BstF5I	GGATG	6 cut(s)	597, 988, 1263, 1329, 1531, 1780
BstFNI	CGCG	1 cut(s)	117
BstH2I	RGCGCY	1 cut(s)	611
BstHHI	GCGC	5 cut(s)	119, 515, 550, 610, 720
BstKTI	GATC	4 cut(s)	1006, 1067, 1365, 1924
BstMAI	GTCTC	2 cut(s)	146, 875
BstMBI	GATC	4 cut(s)	1003, 1064, 1362, 1921
BstNI	CCWGG	3 cut(s)	200, 825, 1224
BstNSI	RCATGY	2 cut(s)	1278, 1289
BstSCI	CCNGG	5 cut(s)	198, 353, 389, 823, 1222
BstSFI	CTRYAG	1 cut(s)	1842
BstSLI	GKGCMC	1 cut(s)	163
BstUI	CGCG	1 cut(s)	117
BstV2I	GAAGAC	1 cut(s)	1752
Bsu15I	ATCGAT	1 cut(s)	129
BsuRI	GGCC	4 cut(s)	27, 338, 828, 1440
BsuTUI	ATCGAT	1 cut(s)	129
BtgI	CCRYGG	3 cut(s)	22, 1049, 1279
BtrI	CACGTC	1 cut(s)	457
BtsCI	GGATG	6 cut(s)	597, 988, 1263, 1329, 1531, 1780
BtsI	GCAGTG	2 cut(s)	163, 440
BtsIMutI	CAGTG	3 cut(s)	163, 440, 1067
Cac8I	GCNNGC	6 cut(s)	76, 441, 754, 1012, 1276, 1823
CciI	TCATGA	1 cut(s)	534
CfoI	GCGC	5 cut(s)	119, 515, 550, 610, 720
Cfr13I	GGNCC	1 cut(s)	1439
ClaI	ATCGAT	1 cut(s)	129
CseI	GACGC	1 cut(s)	1406
Csp6I	GTAC	3 cut(s)	367, 1529, 1688
CspCI	CAANNNNNGTGG	2 cut(s)	1869, 1904
CviQI	GTAC	3 cut(s)	367, 1529, 1688
DdeI	CTNAG	4 cut(s)	241, 413, 896, 1163
DpnI	GATC	4 cut(s)	1005, 1066, 1364, 1923
DpnII	GATC	4 cut(s)	1003, 1064, 1362, 1921
DraI	TTTAAA	1 cut(s)	1684
EaeI	YGGCCR	2 cut(s)	336, 826
Eam1104I	CTCTTC	4 cut(s)	343, 882, 1530, 1842
EarI	CTCTTC	4 cut(s)	343, 882, 1530, 1842
Ecl136II	GAGCTC	1 cut(s)	361
Eco130I	CCWWGG	1 cut(s)	1279
Eco24I	GRGCYC	2 cut(s)	363, 1097
Eco32I	GATATC	1 cut(s)	1567
Eco53kI	GAGCTC	1 cut(s)	361
Eco57I	CTGAAG	2 cut(s)	906, 1427
Eco88I	CYCGRG	1 cut(s)	1060
EcoICRI	GAGCTC	1 cut(s)	361
EcoRI	GAATTC	1 cut(s)	655
EcoRII	CCWGG	3 cut(s)	198, 823, 1222
EcoRV	GATATC	1 cut(s)	1567
EcoT14I	CCWWGG	1 cut(s)	1279
EcoT22I	ATGCAT	4 cut(s)	6, 300, 1522, 1593
EcoT38I	GRGCYC	2 cut(s)	363, 1097
ErhI	CCWWGG	1 cut(s)	1279
Esp3I	CGTCTC	1 cut(s)	146
FalI	AAGNNNNNCTT	4 cut(s)	594, 626, 1779, 1811
FaqI	GGGAC	2 cut(s)	467, 1625
FauI	CCCGC	3 cut(s)	570, 798, 859
FauNDI	CATATG	2 cut(s)	648, 1901
FbaI	TGATCA	2 cut(s)	1003, 1362
FokI	GGATG	6 cut(s)	604, 995, 1270, 1336, 1538, 1787
FriOI	GRGCYC	2 cut(s)	363, 1097
FspBI	CTAG	2 cut(s)	588, 1029
FspI	TGCGCA	1 cut(s)	549
GlaI	GCGC	5 cut(s)	118, 514, 549, 609, 719
GsaI	CCCAGC	1 cut(s)	453
GsuI	CTGGAG	1 cut(s)	1933
HaeII	RGCGCY	1 cut(s)	611
HaeIII	GGCC	4 cut(s)	27, 338, 828, 1440
HapII	CCGG	3 cut(s)	354, 390, 1772
HgaI	GACGC	1 cut(s)	1406
HhaI	GCGC	5 cut(s)	119, 515, 550, 610, 720
Hin6I	GCGC	5 cut(s)	117, 513, 548, 608, 718
HinP1I	GCGC	5 cut(s)	117, 513, 548, 608, 718
HpaII	CCGG	3 cut(s)	354, 390, 1772
HphI	GGTGA	5 cut(s)	40, 47, 646, 664, 724
Hpy166II	GTNNAC	1 cut(s)	1137
Hpy188I	TCNGA	7 cut(s)	402, 499, 615, 897, 1407, 1461, 1516
Hpy188III	TCNNGA	6 cut(s)	345, 535, 860, 925, 1384, 1570
Hpy8I	GTNNAC	1 cut(s)	1137
HpyAV	CCTTC	6 cut(s)	553, 596, 1010, 1402, 1807, 1811
HpyCH4III	ACNGT	9 cut(s)	313, 331, 566, 634, 819, 1050, 1249, 1624, 1909
HpyCH4IV	ACGT	3 cut(s)	405, 426, 456
HpyF3I	CTNAG	4 cut(s)	241, 413, 896, 1163
HpySE526I	ACGT	3 cut(s)	405, 426, 456
HspAI	GCGC	5 cut(s)	117, 513, 548, 608, 718
Ksp22I	TGATCA	2 cut(s)	1003, 1362
Kzo9I	GATC	4 cut(s)	1003, 1064, 1362, 1921
LguI	GCTCTTC	1 cut(s)	343
LmnI	GCTCC	6 cut(s)	153, 181, 241, 358, 1092, 1327
LweI	GCATC	7 cut(s)	973, 1452, 1507, 1578, 1600, 1660, 1765
MaeI	CTAG	2 cut(s)	588, 1029
MaeII	ACGT	3 cut(s)	405, 426, 456
MaeIII	GTNAC	2 cut(s)	214, 1895
MalI	GATC	4 cut(s)	1005, 1066, 1364, 1923
MbiI	CCGCTC	1 cut(s)	231
MboI	GATC	4 cut(s)	1003, 1064, 1362, 1921
MboII	GAAGA	9 cut(s)	360, 461, 611, 899, 1399, 1547, 1757, 1859, 1868
MhlI	GDGCHC	3 cut(s)	163, 363, 1097
MlsI	TGGCCA	1 cut(s)	338
MluCI	AATT	9 cut(s)	616, 655, 855, 1127, 1196, 1292, 1450, 1756, 1762
MluNI	TGGCCA	1 cut(s)	338
MlyI	GAGTC	7 cut(s)	55, 189, 242, 287, 527, 1668, 1813
MmeI	TCCRAC	4 cut(s)	306, 477, 828, 1070
Mox20I	TGGCCA	1 cut(s)	338
Mph1103I	ATGCAT	4 cut(s)	6, 300, 1522, 1593
MroXI	GAANNNNTTC	2 cut(s)	855, 891
MscI	TGGCCA	1 cut(s)	338
MseI	TTAA	6 cut(s)	264, 690, 783, 1043, 1173, 1683
MslI	CAYNNNNRTG	2 cut(s)	533, 1284
Msp20I	TGGCCA	1 cut(s)	338
MspA1I	CMGCKG	3 cut(s)	245, 1841, 1967
MspI	CCGG	3 cut(s)	354, 390, 1772
MspR9I	CCNGG	5 cut(s)	200, 355, 391, 825, 1224
Mva1269I	GAATGC	1 cut(s)	1396
MvaI	CCWGG	3 cut(s)	200, 825, 1224
MvnI	CGCG	1 cut(s)	117
NciI	CCSGG	2 cut(s)	355, 391
NcoI	CCATGG	1 cut(s)	1279
NdeI	CATATG	2 cut(s)	648, 1901
NdeII	GATC	4 cut(s)	1003, 1064, 1362, 1921
NlaIV	GGNNCC	1 cut(s)	1094
NmeAIII	GCCGAG	2 cut(s)	541, 854
NmuCI	GTSAC	2 cut(s)	214, 1895
NsbI	TGCGCA	1 cut(s)	549
NsiI	ATGCAT	4 cut(s)	6, 300, 1522, 1593
NspI	RCATGY	2 cut(s)	1278, 1289
PaeI	GCATGC	1 cut(s)	1278
PagI	TCATGA	1 cut(s)	534
PciSI	GCTCTTC	1 cut(s)	343
PcsI	WCGNNNNNNNCGW	1 cut(s)	317
PctI	GAATGC	1 cut(s)	1396
PdmI	GAANNNNTTC	2 cut(s)	855, 891
PfeI	GAWTC	6 cut(s)	131, 203, 921, 1159, 1511, 1693
PfoI	TCCNGGA	1 cut(s)	198
PleI	GAGTC	7 cut(s)	55, 189, 242, 286, 526, 1667, 1812
PpsI	GAGTC	7 cut(s)	55, 189, 242, 286, 526, 1667, 1812
PsiI	TTATAA	1 cut(s)	525
Psp124BI	GAGCTC	1 cut(s)	363
Psp1406I	AACGTT	2 cut(s)	405, 426
Psp6I	CCWGG	3 cut(s)	198, 823, 1222
PspFI	CCCAGC	1 cut(s)	449
PspGI	CCWGG	3 cut(s)	198, 823, 1222
PspN4I	GGNNCC	1 cut(s)	1094
PspPI	GGNCC	1 cut(s)	1439
PvuII	CAGCTG	2 cut(s)	245, 1967
RsaI	GTAC	3 cut(s)	368, 1530, 1689
RsaNI	GTAC	3 cut(s)	367, 1529, 1688
RseI	CAYNNNNRTG	2 cut(s)	533, 1284
SacI	GAGCTC	1 cut(s)	363
SapI	GCTCTTC	1 cut(s)	343
SaqAI	TTAA	6 cut(s)	264, 690, 783, 1043, 1173, 1683
Sau3AI	GATC	4 cut(s)	1003, 1064, 1362, 1921
Sau96I	GGNCC	1 cut(s)	1439
ScaI	AGTACT	1 cut(s)	1689
SchI	GAGTC	7 cut(s)	55, 189, 242, 287, 527, 1668, 1813
ScrFI	CCNGG	5 cut(s)	200, 355, 391, 825, 1224
SduI	GDGCHC	3 cut(s)	163, 363, 1097
SfaNI	GCATC	7 cut(s)	973, 1452, 1507, 1578, 1600, 1660, 1765
SfcI	CTRYAG	1 cut(s)	1842
SmiMI	CAYNNNNRTG	2 cut(s)	533, 1284
SmlI	CTYRAG	7 cut(s)	143, 219, 275, 362, 794, 1546, 1750
SmoI	CTYRAG	7 cut(s)	143, 219, 275, 362, 794, 1546, 1750
SphI	GCATGC	1 cut(s)	1278
Sse9I	AATT	9 cut(s)	616, 655, 855, 1127, 1196, 1292, 1450, 1756, 1762
SspMI	CTAG	2 cut(s)	588, 1029
SstI	GAGCTC	1 cut(s)	363
StyD4I	CCNGG	5 cut(s)	198, 353, 389, 823, 1222
StyI	CCWWGG	1 cut(s)	1279
TaaI	ACNGT	9 cut(s)	313, 331, 566, 634, 819, 1050, 1249, 1624, 1909
TaiI	ACGT	3 cut(s)	408, 429, 459
TaqI	TCGA	2 cut(s)	129, 1385
TasI	AATT	9 cut(s)	616, 655, 855, 1127, 1196, 1292, 1450, 1756, 1762
TatI	WGTACW	2 cut(s)	1528, 1687
TauI	GCSGC	1 cut(s)	1841
TfiI	GAWTC	6 cut(s)	131, 203, 921, 1159, 1511, 1693
Tru1I	TTAA	6 cut(s)	264, 690, 783, 1043, 1173, 1683
Tru9I	TTAA	6 cut(s)	264, 690, 783, 1043, 1173, 1683
TscAI	CASTG	3 cut(s)	163, 440, 1074
TseFI	GTSAC	2 cut(s)	214, 1895
Tsp45I	GTSAC	2 cut(s)	214, 1895
TspDTI	ATGAA	5 cut(s)	282, 283, 305, 437, 1464
TspGWI	ACGGA	1 cut(s)	1501
TspRI	CASTG	3 cut(s)	163, 440, 1074
XapI	RAATTY	7 cut(s)	655, 855, 1127, 1196, 1450, 1756, 1762
XceI	RCATGY	2 cut(s)	1278, 1289
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1321, 1577
XmnI	GAANNNNTTC	2 cut(s)	855, 891
XspI	CTAG	2 cut(s)	588, 1029
ZrmI	AGTACT	1 cut(s)	1689
Zsp2I	ATGCAT	4 cut(s)	6, 300, 1522, 1593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.