MD15G1285900.v1.1

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0009363
Physical Location & Seq
Reverse (-)
26076132 .. 26083928
7797 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1285900.v1.1.491

Sequence Viewer

Length: 2793 bp
ATGGCGTCGAAGGCTTCGCCTTCCGCTTCTGCCAATAGATCGGAGCTTCACGACGACCCGCCGATGACGAGATCACAAGAAAACATGGATGTAACCCGGAAGGAGATTTCATTGCTCATAGAAAATCTAAAGACGCAAGTTGTTTTTAACCGGGCTACTTCTATAAAGAAAAGAATGGAGGAAAACAGGCAGAAGTTGGCTGGTGTCACCAACAACATGTATAAACTGTCAACGGAAAGAGCAAGTAGTAGGTTAACTGATGCTGGTAGAAGTTTAGATCTATTGACAAAGAGGCAAAAAGATGCATTTGCCTTGCAAAATGGAATTGAATTGAGCAATGGGAGCAACGATAGCTCTCAAGAAGATGGTCATGGGTCCACAGCAGTTCTACTTGAATCTAATGTAGCAGTCAAGAGTTCTGTTCGTCCTATCAAGCTTCTGGAAGTTAAAAGACTACCTCCTTATACTACATGGATATTTTTGGACAGAAACCAAAGAATGACAGAAGATCAGTCAGTGGTAGGTCGAAGAAGAATTTATTATGATCAAAATGGAGGTGAAGCTCTTATATGTAGTGATAGTGAGGAGGAAGCAGTTGATGAAGAAGAGGAAAAAAGGGATTTTGTTGAATCTGAAGACTTTATACTTCGCTCGGCTATAAAAGAAGTTGGCTTCCCTGATCCAGTGCTGGAGTCATTAGCACAGTGTTTCTCTAGAAGTCCATCTGAAGTCAAGGCAAGATATGATACTCTCGTAAAGGAAGAGGAGGCTTCGGGGGGTTGTAAGAGCAGGGATACTGAAGACATTTCACAAATTGGGAATTCTTTTATTGATAAAGATCTGGATGCAGCTCTGGATTCATTTGACAACCTATTTTGTCGTCGCTGCCTAGTATTTGATTGCAGATTACATGGATGTTCACAGGATCTTGTCTTTCCTGTTGAGAAACAACCTCCATGGAGTCCCCCGGATGACGAAAAAGTATCATGCGGTCCGAATTGCTATAGATCAGTACTGAAGTCTGAAAGAATTGCTAGAGTGAGCTCTGGTGATCTTGAAGAAAAAAAGGTCACATCATTCGATGGTGCTAGTGCTCAAATATCAACCAGAAAGAAATCTTCTAGAAAGAAGGCAAAGTCCGGGCAAAGTGAAAGTGCTTCATCTAATGCTAAAAACATCTCAGAAAGCAGTGCTTCAGAGAATGGATCCAGGCAGGATACTGATAACCATCATCAATCACCCACAAAGACTAAGCTAGCAGGAAAAAGTGGAATTCGTAAGAGGAATAGCAAGAGAGTTGCAGAGCGTGTTCTAATTTGCATGCAGAAGAGGCAGAAGAAAATGGTGGTTTCTGATTCCGATTCCATTGTTAATGCTGGTCTCTGTTCAAGTGATATGAAGCTTAGATCTAATTCATGCAAAGATAATGAAGACACTAGTTCTTCTTCACAAAAGAATCTGAAATCTTCTACCAGTGGAGGGTTTAGGAGGAGGGAATCACCTGCTAAGGGCAGCAACAAAGTTGTTCAGGGTGAATCTCCTGATGGTGCACTGGATGAGATGATCGCTGATCCACCTGCTACAAGTAGTGATGACAATTTGAGGAGAGAAGAATGTGTTGATGAAAACATATATAAACAAGAATTAAGTGATGATAAAACATGGAAAACTATTGAGAAGGGCCTTTTTGAGAAAGGCATAGAGATATTTGGCAGCAACAGCTGCTTAATAGCAAGGAACCTTTTAAATGGAATGAAAACGTGTTGGGAGGTTTTTCAGTATATGAATTACTCAGAGAGTAAGATATCCTGCCAAGCAGGTGATGCTGCAAACTCCCTTGTTGAAGGGTATTCCAAGGGCAATAATGAAGCAAGAAGGAGATCAAAATTTTTACGTAGAAGGGGTAGAGTTCGTCGTTTGAAGTATACTTGGAAATCTGCGGCTTACCACTCAATCAGGAAACGAATTACTGAGAGAAAAGATCAGCCTTGCAGGCAGTATAATCCATGTACTTGCCAAACAGCTTGTGGAAAGCAGTGTTCTTGTCTACAAAACGGGACTTGTTGCGAGAAGTACTGTGGGTGTCCAAAGACTTGCAAGAATAGATTTAGAGGTTGTCATTGTGCTAAAAGTCAATGCCGAAGCCGTCAGTGTCCTTGTTTTGCTGCAGACAGGGAATGTGATCCGGATGTTTGTCGGAATTGCTGGGTTAGGTTTGGACTACGTTTAAGGGGCTGTCAAATTTCATTTTGCAGTTGTGGAGATGGTACCCTTGGGGTTCCAAGCCAAAGAGGTGACAATTATGAGTGTAGAAATATGAAGCTTCTTCTGAAACAACAACAAAGGGTCTTACTTGGAAGGTCTGACGTATCTGGCTGGGGTGCTTTCTTAAAGAATAGTGTCGCCAAACATGAATACCTTGGTGAGTATACTGGGGAGTTGATCTCACACCGCGAAGCAGATAAGCGTGGAAAAATATATGACCGTGAAAATTCATCATTTCTCTTCAATCTGAACGATCAGTTTGTCCTTGATGCTTATCGGAAGGGTGACAAACTGAAGTTTGCCAACCACTCTCCAGATCCAAATTGCTATGCGAAGGTCATTATGGTCGCCGGAGATCACAGGGTGGGCATATTTGCCAAGGAACGAATTGCTGCAGGAGAGGAACTTTTCTATGATTATCGCTATGAGCCGGACAGAGCTCCCGCTTGGGCCCGGAAGCCCGAGGCATCCGGGTCAAAAAAGGACGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0003727 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006139 GO:0006325 GO:0006342 GO:0006349 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009292 GO:0009294 GO:0009653 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009965 GO:0009987 GO:0010016 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016278 GO:0016279 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0017053 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0040030 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045814 GO:0045857 GO:0045892 GO:0045934 GO:0046483 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048586 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0070013 GO:0070734 GO:0071514 GO:0071704 GO:0071840 GO:0080090 GO:0090568 GO:0097159 GO:0099402 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00310 ko05206 map00310 map05206
Pfam Domains
Protein Families
SET

Protein Analysis

931

Amino Acids

104.27

Weight (kDa)

8.87

Isoelectric Point (pI)

57.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HTH_CLF_N PF25996 208 - 251 3.2e-19 Histone-lysine N-methyltransferase CLF, N-terminal HTH domain
preSET_CXC PF18264 705 - 736 8.9e-08 CXC domain
SET PF00856 792 - 895 1.1e-19 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 1510, 1585, 1808
Acc36I ACCTGC 3 cut(s) 1510, 1585, 1808
Acc65I GGTACC 1 cut(s) 2267
AccB1I GGYRCC 1 cut(s) 2267
AccI GTMKAC 3 cut(s) 1925, 2047, 2429
AccII CGCG 1 cut(s) 2454
AccIII TCCGGA 1 cut(s) 2185
AciI CCGC 6 cut(s) 24, 59, 990, 1940, 2452, 2709
AclWI GGATC 7 cut(s) 674, 933, 1200, 1213, 1565, 2177, 2576
AcsI RAATTY 6 cut(s) 534, 820, 1272, 1886, 2241, 2491
AcuI CTGAAG 6 cut(s) 654, 747, 819, 1037, 1179, 2579
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 2629
AfaI GTAC 4 cut(s) 1014, 2011, 2075, 2269
AfiI CCNNNNNNNGG 3 cut(s) 1479, 1508, 2768
AflIII ACRYGT 2 cut(s) 216, 1760
AgsI TTSAA 9 cut(s) 329, 395, 629, 1058, 1389, 1844, 1921, 2509, 2766
AhlI ACTAGT 1 cut(s) 1436
AjnI CCWGG 1 cut(s) 1208
Alw21I GWGCWC 5 cut(s) 1046, 1096, 1552, 2707, 2761
Alw26I GTCTC 1 cut(s) 1385
Alw44I GTGCAC 1 cut(s) 1548
AlwI GGATC 7 cut(s) 674, 933, 1200, 1213, 1565, 2177, 2576
Ama87I CYCGRG 1 cut(s) 2726
Aor13HI TCCGGA 1 cut(s) 2185
AoxI GGCC 2 cut(s) 1681, 2715
ApaI GGGCCC 1 cut(s) 2719
ApaLI GTGCAC 1 cut(s) 1548
ApeKI GCWGC 8 cut(s) 848, 885, 1512, 1713, 1722, 1826, 2165, 2657
ApoI RAATTY 6 cut(s) 534, 820, 1272, 1886, 2241, 2491
Asp718I GGTACC 1 cut(s) 2267
AspS9I GGNCC 5 cut(s) 375, 992, 1681, 2715, 2716
AsuC2I CCSGG 6 cut(s) 97, 152, 968, 1141, 2719, 2737
AsuNHI GCTAGC 1 cut(s) 1255
AvaI CYCGRG 1 cut(s) 2726
AvaII GGWCC 2 cut(s) 375, 992
BaeGI GKGCMC 2 cut(s) 1552, 2719
BaeI ACNNNNGTAYC 2 cut(s) 738, 771
BamHI GGATCC 1 cut(s) 1205
BanI GGYRCC 1 cut(s) 2267
BanII GRGCYC 3 cut(s) 1046, 2707, 2719
BarI GAAGNNNNNNTAC 2 cut(s) 627, 659
BbsI GAAGAC 3 cut(s) 642, 807, 1437
Bbv12I GWGCWC 5 cut(s) 1046, 1096, 1552, 2707, 2761
BbvI GCAGC 8 cut(s) 860, 872, 1524, 1709, 1725, 1813, 2152, 2644
BccI CCATC 6 cut(s) 359, 730, 1076, 1236, 1538, 2258
BceAI ACGGC 1 cut(s) 2130
BciT130I CCWGG 1 cut(s) 1210
BciVI GTATCC 2 cut(s) 787, 1210
BclI TGATCA 1 cut(s) 544
BcnI CCSGG 6 cut(s) 97, 152, 968, 1141, 2719, 2737
BcoDI GTCTC 1 cut(s) 1385
BcuI ACTAGT 1 cut(s) 1436
BfaI CTAG 7 cut(s) 714, 890, 1035, 1089, 1122, 1256, 1437
BfmI CTRYAG 3 cut(s) 1003, 2166, 2658
BfuAI ACCTGC 3 cut(s) 1510, 1585, 1808
BfuI GTATCC 2 cut(s) 787, 1210
BglI GCCNNNNNGGC 1 cut(s) 1993
BglII AGATCT 3 cut(s) 277, 838, 1406
BisI GCNGC 9 cut(s) 849, 886, 1513, 1714, 1723, 1827, 1941, 2166, 2658
BlsI GCNGC 9 cut(s) 850, 887, 1514, 1715, 1724, 1828, 1942, 2167, 2659
BmcAI AGTACT 2 cut(s) 1014, 2075
Bme1390I CCNGG 7 cut(s) 97, 152, 968, 1141, 1210, 2719, 2737
Bme18I GGWCC 2 cut(s) 375, 992
BmeT110I CYCGRG 1 cut(s) 2726
BmgT120I GGNCC 5 cut(s) 375, 992, 1681, 2715, 2716
BmiI GGNNCC 6 cut(s) 376, 1207, 1739, 2269, 2280, 2717
BmrFI CCNGG 7 cut(s) 97, 152, 968, 1141, 1210, 2719, 2737
BmrI ACTGGG 1 cut(s) 2442
BmsI GCATC 6 cut(s) 250, 292, 835, 1813, 2524, 2741
BmtI GCTAGC 1 cut(s) 1259
BmuI ACTGGG 1 cut(s) 2442
BpiI GAAGAC 3 cut(s) 642, 807, 1437
BplI GAGNNNNNCTC 2 cut(s) 2429, 2461
BpmI CTGGAG 2 cut(s) 710, 2562
Bpu10I CCTNAGC 1 cut(s) 1506
BpuEI CTTGAG 1 cut(s) 342
BpuMI CCSGG 6 cut(s) 97, 152, 968, 1141, 2719, 2737
BsaAI YACGTR 1 cut(s) 1895
BsaBI GATNNNNATC 3 cut(s) 837, 1227, 2538
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1385
BsaJI CCNNGG 7 cut(s) 956, 966, 1854, 2272, 2419, 2643, 2727
BsaWI WCCGGW 1 cut(s) 2185
Bsc4I CCNNNNNNNGG 3 cut(s) 1479, 1508, 2768
Bse1I ACTGG 4 cut(s) 683, 1473, 1557, 2437
Bse3DI GCAATG 2 cut(s) 110, 343
Bse8I GATNNNNATC 3 cut(s) 837, 1227, 2538
BseAI TCCGGA 1 cut(s) 2185
BseBI CCWGG 1 cut(s) 1210
BseDI CCNNGG 7 cut(s) 956, 966, 1854, 2272, 2419, 2643, 2727
BseGI GGATG 7 cut(s) 94, 850, 920, 976, 1561, 2194, 2732
BseJI GATNNNNATC 3 cut(s) 837, 1227, 2538
BseLI CCNNNNNNNGG 3 cut(s) 1479, 1508, 2768
BseMI GCAATG 2 cut(s) 110, 343
BseMII CTCAG 3 cut(s) 1194, 1806, 1962
BseNI ACTGG 4 cut(s) 683, 1473, 1557, 2437
BseRI GAGGAG 4 cut(s) 599, 779, 1504, 1618
BseSI GKGCMC 2 cut(s) 1552, 2719
BseXI GCAGC 8 cut(s) 860, 872, 1524, 1709, 1725, 1813, 2152, 2644
BseYI CCCAGC 2 cut(s) 2205, 2376
Bsh1236I CGCG 1 cut(s) 2454
BshFI GGCC 2 cut(s) 1683, 2717
BshNI GGYRCC 1 cut(s) 2267
BsiHKAI GWGCWC 5 cut(s) 1046, 1096, 1552, 2707, 2761
BsiHKCI CYCGRG 1 cut(s) 2726
BsiSI CCGG 9 cut(s) 97, 151, 968, 1140, 2186, 2616, 2696, 2719, 2736
BslFI GGGAC 2 cut(s) 948, 2071
BslI CCNNNNNNNGG 3 cut(s) 1479, 1508, 2768
BsmAI GTCTC 1 cut(s) 1385
BsmFI GGGAC 2 cut(s) 948, 2071
BsnI GGCC 2 cut(s) 1683, 2717
Bso31I GGTCTC 1 cut(s) 1385
BsoBI CYCGRG 1 cut(s) 2726
Bsp120I GGGCCC 1 cut(s) 2715
Bsp1286I GDGCHC 6 cut(s) 1046, 1096, 1552, 2707, 2719, 2761
Bsp13I TCCGGA 1 cut(s) 2185
Bsp19I CCATGG 1 cut(s) 956
BspACI CCGC 6 cut(s) 24, 59, 990, 1940, 2452, 2709
BspANI GGCC 2 cut(s) 1683, 2717
BspCNI CTCAG 3 cut(s) 1193, 1805, 1963
BspEI TCCGGA 1 cut(s) 2185
BspFNI CGCG 1 cut(s) 2454
BspLI GGNNCC 6 cut(s) 376, 1207, 1739, 2269, 2280, 2717
BspMAI CTGCAG 2 cut(s) 2170, 2662
BspMI ACCTGC 3 cut(s) 1510, 1585, 1808
BspOI GCTAGC 1 cut(s) 1259
BspPI GGATC 7 cut(s) 674, 933, 1200, 1213, 1565, 2177, 2576
BspT107I GGYRCC 1 cut(s) 2267
BspTNI GGTCTC 1 cut(s) 1385
BsrDI GCAATG 2 cut(s) 110, 343
BsrI ACTGG 4 cut(s) 683, 1473, 1557, 2437
BssECI CCNNGG 7 cut(s) 956, 966, 1854, 2272, 2419, 2643, 2727
BssNAI GTATAC 2 cut(s) 1926, 2430
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 5 cut(s) 956, 1854, 2272, 2419, 2643
Bst1107I GTATAC 2 cut(s) 1926, 2430
Bst2UI CCWGG 1 cut(s) 1210
Bst4CI ACNGT 5 cut(s) 228, 705, 2078, 2486, 2756
Bst6I CTCTTC 4 cut(s) 600, 756, 1322, 2510
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 2 cut(s) 1722, 1823
BstBAI YACGTR 1 cut(s) 1895
BstC8I GCNNGC 4 cut(s) 1257, 1322, 1994, 2787
BstDEI CTNAG 6 cut(s) 1180, 1251, 1403, 1506, 1792, 1971
BstDSI CCRYGG 1 cut(s) 956
BstF5I GGATG 7 cut(s) 94, 850, 920, 976, 1561, 2194, 2732
BstFNI CGCG 1 cut(s) 2454
BstMAI GTCTC 1 cut(s) 1385
BstMWI GCNNNNNNNGC 8 cut(s) 11, 342, 351, 1330, 1719, 1722, 1823, 1993
BstNI CCWGG 1 cut(s) 1210
BstNSI RCATGY 2 cut(s) 220, 1324
BstSCI CCNGG 7 cut(s) 95, 150, 966, 1139, 1208, 2717, 2735
BstSFI CTRYAG 3 cut(s) 1003, 2166, 2658
BstSLI GKGCMC 2 cut(s) 1552, 2719
BstSNI TACGTA 1 cut(s) 1895
BstUI CGCG 1 cut(s) 2454
BstV1I GCAGC 8 cut(s) 860, 872, 1524, 1709, 1725, 1813, 2152, 2644
BstV2I GAAGAC 3 cut(s) 642, 807, 1437
BstX2I RGATCY 6 cut(s) 277, 838, 925, 1205, 1406, 2581
BstYI RGATCY 6 cut(s) 277, 838, 925, 1205, 1406, 2581
BstZ17I GTATAC 2 cut(s) 1926, 2430
BsuI GTATCC 2 cut(s) 787, 1210
BsuRI GGCC 2 cut(s) 1683, 2717
BtgI CCRYGG 1 cut(s) 956
BtsCI GGATG 7 cut(s) 94, 850, 920, 976, 1561, 2194, 2732
BtsI GCAGTG 2 cut(s) 1195, 2042
BtsIMutI CAGTG 8 cut(s) 522, 690, 710, 1195, 1480, 1550, 2042, 2156
BveI ACCTGC 3 cut(s) 1510, 1585, 1808
Cac8I GCNNGC 4 cut(s) 1257, 1322, 1994, 2787
Cfr13I GGNCC 5 cut(s) 375, 992, 1681, 2715, 2716
CpoI CGGWCCG 1 cut(s) 992
CseI GACGC 1 cut(s) 142
Csp6I GTAC 4 cut(s) 1013, 2010, 2074, 2268
CspI CGGWCCG 1 cut(s) 992
CviQI GTAC 4 cut(s) 1013, 2010, 2074, 2268
DdeI CTNAG 6 cut(s) 1180, 1251, 1403, 1506, 1792, 1971
DraI TTTAAA 1 cut(s) 1746
DraIII CACNNNGTG 1 cut(s) 2629
Eam1104I CTCTTC 4 cut(s) 600, 756, 1322, 2510
EarI CTCTTC 4 cut(s) 600, 756, 1322, 2510
Ecl136II GAGCTC 2 cut(s) 1044, 2705
Eco105I TACGTA 1 cut(s) 1895
Eco130I CCWWGG 5 cut(s) 956, 1854, 2272, 2419, 2643
Eco24I GRGCYC 3 cut(s) 1046, 2707, 2719
Eco31I GGTCTC 1 cut(s) 1385
Eco32I GATATC 1 cut(s) 1806
Eco47I GGWCC 2 cut(s) 375, 992
Eco53kI GAGCTC 2 cut(s) 1044, 2705
Eco57I CTGAAG 6 cut(s) 654, 747, 819, 1037, 1179, 2579
Eco88I CYCGRG 1 cut(s) 2726
EcoICRI GAGCTC 2 cut(s) 1044, 2705
EcoO109I RGGNCCY 1 cut(s) 1681
EcoRI GAATTC 2 cut(s) 820, 1272
EcoRII CCWGG 1 cut(s) 1208
EcoRV GATATC 1 cut(s) 1806
EcoT14I CCWWGG 5 cut(s) 956, 1854, 2272, 2419, 2643
EcoT22I ATGCAT 1 cut(s) 307
EcoT38I GRGCYC 3 cut(s) 1046, 2707, 2719
ErhI CCWWGG 5 cut(s) 956, 1854, 2272, 2419, 2643
FalI AAGNNNNNCTT 2 cut(s) 1177, 1209
FaqI GGGAC 2 cut(s) 948, 2071
FauI CCCGC 2 cut(s) 66, 2716
FbaI TGATCA 1 cut(s) 544
FblI GTMKAC 3 cut(s) 1925, 2047, 2429
Fnu4HI GCNGC 9 cut(s) 849, 886, 1513, 1714, 1723, 1827, 1941, 2166, 2658
FokI GGATG 7 cut(s) 101, 857, 927, 983, 1568, 2201, 2719
FriOI GRGCYC 3 cut(s) 1046, 2707, 2719
Fsp4HI GCNGC 9 cut(s) 849, 886, 1513, 1714, 1723, 1827, 1941, 2166, 2658
FspBI CTAG 7 cut(s) 714, 890, 1035, 1089, 1122, 1256, 1437
GluI GCNGC 9 cut(s) 849, 886, 1513, 1714, 1723, 1827, 1941, 2166, 2658
GsaI CCCAGC 2 cut(s) 2209, 2380
GsuI CTGGAG 2 cut(s) 710, 2562
HaeIII GGCC 2 cut(s) 1683, 2717
HapII CCGG 9 cut(s) 97, 151, 968, 1140, 2186, 2616, 2696, 2719, 2736
HgaI GACGC 1 cut(s) 142
Hin1I GRCGYC 1 cut(s) 5
HincII GTYRAC 2 cut(s) 231, 255
HindII GTYRAC 2 cut(s) 231, 255
HindIII AAGCTT 4 cut(s) 434, 1400, 2321, 2783
HpaI GTTAAC 1 cut(s) 255
HpaII CCGG 9 cut(s) 97, 151, 968, 1140, 2186, 2616, 2696, 2719, 2736
Hpy166II GTNNAC 8 cut(s) 231, 255, 378, 920, 1550, 1926, 2048, 2430
Hpy8I GTNNAC 8 cut(s) 231, 255, 378, 920, 1550, 1926, 2048, 2430
Hpy99I CGWCG 5 cut(s) 10, 56, 885, 1917, 2756
HpyCH4III ACNGT 5 cut(s) 228, 705, 2078, 2486, 2756
HpyCH4IV ACGT 4 cut(s) 1760, 1894, 2224, 2367
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 342, 351, 1330, 1719, 1722, 1823, 1993
HpyF3I CTNAG 6 cut(s) 1180, 1251, 1403, 1506, 1792, 1971
HpySE526I ACGT 4 cut(s) 1760, 1894, 2224, 2367
Hsp92I GRCGYC 1 cut(s) 5
Kpn2I TCCGGA 1 cut(s) 2185
KpnI GGTACC 1 cut(s) 2271
Ksp22I TGATCA 1 cut(s) 544
KspAI GTTAAC 1 cut(s) 255
LmnI GCTCC 4 cut(s) 43, 342, 2710, 2764
Lsp1109I GCAGC 8 cut(s) 860, 872, 1524, 1709, 1725, 1813, 2152, 2644
LweI GCATC 6 cut(s) 250, 292, 835, 1813, 2524, 2741
MaeI CTAG 7 cut(s) 714, 890, 1035, 1089, 1122, 1256, 1437
MaeII ACGT 4 cut(s) 1760, 1894, 2224, 2367
MaeIII GTNAC 5 cut(s) 91, 205, 1069, 2294, 2549
MflI RGATCY 6 cut(s) 277, 838, 925, 1205, 1406, 2581
MhlI GDGCHC 6 cut(s) 1046, 1096, 1552, 2707, 2719, 2761
MlyI GAGTC 2 cut(s) 701, 970
MmeI TCCRAC 1 cut(s) 2177
Mph1103I ATGCAT 1 cut(s) 307
MroI TCCGGA 1 cut(s) 2185
MspA1I CMGCKG 1 cut(s) 1722
MspI CCGG 9 cut(s) 97, 151, 968, 1140, 2186, 2616, 2696, 2719, 2736
MspR9I CCNGG 7 cut(s) 97, 152, 968, 1141, 1210, 2719, 2737
MvaI CCWGG 1 cut(s) 1210
MvnI CGCG 1 cut(s) 2454
MwoI GCNNNNNNNGC 8 cut(s) 11, 342, 351, 1330, 1719, 1722, 1823, 1993
NciI CCSGG 6 cut(s) 97, 152, 968, 1141, 2719, 2737
NcoI CCATGG 1 cut(s) 956
NheI GCTAGC 1 cut(s) 1255
NlaIV GGNNCC 6 cut(s) 376, 1207, 1739, 2269, 2280, 2717
NmeAIII GCCGAG 1 cut(s) 632
NmuCI GTSAC 4 cut(s) 205, 1069, 2294, 2549
NsiI ATGCAT 1 cut(s) 307
NspI RCATGY 2 cut(s) 220, 1324
PaeI GCATGC 1 cut(s) 1324
PaqCI CACCTGC 3 cut(s) 1510, 1585, 1808
PciI ACATGT 1 cut(s) 216
PfeI GAWTC 8 cut(s) 395, 629, 857, 1355, 1361, 1456, 1496, 1535
PkrI GCNGC 9 cut(s) 850, 887, 1514, 1715, 1724, 1828, 1942, 2167, 2659
PleI GAGTC 2 cut(s) 700, 969
PpsI GAGTC 2 cut(s) 700, 969
Ppu21I YACGTR 1 cut(s) 1895
PscI ACATGT 1 cut(s) 216
Psp124BI GAGCTC 2 cut(s) 1046, 2707
Psp6I CCWGG 1 cut(s) 1208
PspFI CCCAGC 2 cut(s) 2205, 2376
PspGI CCWGG 1 cut(s) 1208
PspN4I GGNNCC 6 cut(s) 376, 1207, 1739, 2269, 2280, 2717
PspOMI GGGCCC 1 cut(s) 2715
PspPI GGNCC 5 cut(s) 375, 992, 1681, 2715, 2716
PstI CTGCAG 2 cut(s) 2170, 2662
PsuI RGATCY 6 cut(s) 277, 838, 925, 1205, 1406, 2581
PvuII CAGCTG 1 cut(s) 1722
RsaI GTAC 4 cut(s) 1014, 2011, 2075, 2269
RsaNI GTAC 4 cut(s) 1013, 2010, 2074, 2268
Rsr2I CGGWCCG 1 cut(s) 992
RsrII CGGWCCG 1 cut(s) 992
SacI GAGCTC 2 cut(s) 1046, 2707
SatI GCNGC 9 cut(s) 849, 886, 1513, 1714, 1723, 1827, 1941, 2166, 2658
Sau96I GGNCC 5 cut(s) 375, 992, 1681, 2715, 2716
ScaI AGTACT 2 cut(s) 1014, 2075
SchI GAGTC 2 cut(s) 701, 970
ScrFI CCNGG 7 cut(s) 97, 152, 968, 1141, 1210, 2719, 2737
SduI GDGCHC 6 cut(s) 1046, 1096, 1552, 2707, 2719, 2761
SfaNI GCATC 6 cut(s) 250, 292, 835, 1813, 2524, 2741
SfcI CTRYAG 3 cut(s) 1003, 2166, 2658
SinI GGWCC 2 cut(s) 375, 992
SmlI CTYRAG 1 cut(s) 357
SmoI CTYRAG 1 cut(s) 357
SnaBI TACGTA 1 cut(s) 1895
SpeI ACTAGT 1 cut(s) 1436
SphI GCATGC 1 cut(s) 1324
SsiI CCGC 6 cut(s) 24, 59, 990, 1940, 2452, 2709
SspMI CTAG 7 cut(s) 714, 890, 1035, 1089, 1122, 1256, 1437
SstI GAGCTC 2 cut(s) 1046, 2707
StyD4I CCNGG 7 cut(s) 95, 150, 966, 1139, 1208, 2717, 2735
StyI CCWWGG 5 cut(s) 956, 1854, 2272, 2419, 2643
TaaI ACNGT 5 cut(s) 228, 705, 2078, 2486, 2756
TaiI ACGT 4 cut(s) 1763, 1897, 2227, 2370
TaqI TCGA 3 cut(s) 8, 526, 1080
TatI WGTACW 3 cut(s) 1012, 2009, 2073
TauI GCSGC 1 cut(s) 1943
TfiI GAWTC 8 cut(s) 395, 629, 857, 1355, 1361, 1456, 1496, 1535
TscAI CASTG 8 cut(s) 522, 690, 710, 1195, 1480, 1557, 2042, 2156
TseFI GTSAC 4 cut(s) 205, 1069, 2294, 2549
TseI GCWGC 8 cut(s) 848, 885, 1512, 1713, 1722, 1826, 2165, 2657
Tsp45I GTSAC 4 cut(s) 205, 1069, 2294, 2549
TspGWI ACGGA 1 cut(s) 248
TspRI CASTG 8 cut(s) 522, 690, 710, 1195, 1480, 1557, 2042, 2156
VneI GTGCAC 1 cut(s) 1548
VpaK11BI GGWCC 2 cut(s) 375, 992
XapI RAATTY 6 cut(s) 534, 820, 1272, 1886, 2241, 2491
XbaI TCTAGA 2 cut(s) 713, 1121
XceI RCATGY 2 cut(s) 220, 1324
XcmI CCANNNNNNNNNTGG 1 cut(s) 2024
XmiI GTMKAC 3 cut(s) 1925, 2047, 2429
XspI CTAG 7 cut(s) 714, 890, 1035, 1089, 1122, 1256, 1437
ZrmI AGTACT 2 cut(s) 1014, 2075
Zsp2I ATGCAT 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.