Rh2DG189500

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0009363
Physical Location & Seq
Reverse (-)
17037009 .. 17045521
8513 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG189500.1

Sequence Viewer

Length: 2742 bp
ATGTTGATGGAGAGTGCTTATCAGCCGCTTTTGGAACCCCTTTGCCCCATTGTTCTGTGTTCATTCAATTCCAGTGTGACGGGAACAGAAGAAAATGCTCTGGCCCTGAACCTAAAGGAGATTTCATTGATTATAGATTCTCTACAGAAGCAAGTTATTTCGAACCGTGGTGTCTCTATAAAGAAACGAATGGAAGAAAACAGACAGAAATTGGCTGGTGTCACTAACAATTTTTATAACTTGTCAATGGAAAGAAGAAGTAGTAGCTTATTGTATCCTGGTAAAAGCGTTGACCTATTGACGAAGAGGCAACAAGATGCATTTAAGCTGCAAAATGGTGATGAAAGTAATGGGAGCAATGATAGCTCTCAAGAAGATGGGCATGGTTCCACAGCAGTTCTTCTAGAATCTAATGTTGCTGTCAAGAATGCTGTTCGTCCTATTAAGCTTCCGGAAGTTAAAAGACTACCGCCTTATACTACATGGGTATTTTTGGACAGAAATCAAAGAATGACAGAGGATCAGTCGGTTGTGGGTCGAAGAAGAATTTATTATGATCAAAATGGAGGTGAAGCTCTTATATGTAGTGATAGTGAGGAGGAAGCAATTGACGAAGAAGAGGAAAAGAGGGAGTTTGTTGAATCTGAAGACTATATACTTCGCATGACTATTAAAGAAGCTGGTGTCTCCGATCCTGTGCTGGAGTCATTGGCACAGTATTTCTCTAGAAGCCCTGCTGAAGTCAAGGCAAGATATGAAGCTCTTATAAAAGAAGAGGAGTCCGTGGGGATTTCTAAGAATACGGATAAAGAAGACCTTTCAAAAAATGACAATTCTTTTCTTGATAAAGATCTGGATGCAGCTCTGGATTCATTTGATAACCTATTTTGTCGGCGATGCCTTGTATTTGATTGCAGATTGCATGGATGTTCGCAGGATCTTGTCTTTCCTGCTGAGAAACAAACTCCACGGAGTCCTCCAGATGATGAAAATGTACCATGTGGTCCAAATTGCTATCGATCAGTACGGAAGTCCGAAGGAATTGCTACAATAAGCTGTCCAGTGAATGATGATCTGGAAGAAAAAGATATAAAGAAATCTTCTGGTTTATCTAGAAAGAAGGGAAAGTCCTTCCAAAGTGAAAGTGCTTCATCAAATGCAAAAAACATATCAGAAAGCAGTGATTCAGAGAATGAAACCAGGCAGGATGATACTTGTAGCCATGATCCAATATCTTCAAAGACTAAGGTAGCAGGGAAAAGTGGAATCCCTAAGAGGAACAGCAAGAGAGTTGCAGAGCGTGTTCTGGTGTGTATGCAGAAGAGGCAGAAGAAAACAATGGCTTCTGATTCTGATTCAATAGTTGATGGTGGTCTTTGTGCAAGTGATATGAAGCTTAGATCTAATTCATGCAAAGATAATGAAGACACTAGTTCTTCTTCGCAAAAGAATCTGAAATCTTCTTCCAGTGGAAGGTCTAGGAGGGAATCACCTCTGAAGGACAGTAACAAAGTAGTTCAGGGTGAAGTTCTTGATGGCTCATCAAATGAGATGATCACTGATCCACCTGCCACTAGTAGTGATGACAATTTGAGGAAAGAAGAGTATGTAGATGAAAACATATACAAACAAGAATGCAGTGATGACAAAACTTGGAAAACTATTGAAACGAGTCTTTTCGAGAAAGGCATAGAGATATTTGGCAAGAACAGCTGTTTAATAGCAAGGAACCTGCTAAACGGTATGAAAACTTGTTGGGAGGTCTTTCAGTATATGAATTACTCAGACAGTAAGATTTCCTGCCAAGCGGGTGATGCTGCGAACTCCCTTGTTGAAGGGTATTCCAAGGGTAATAATGAAGCAAGAAGAAGATCAAGATTTTTACGTAGGAAGGGTAGAGTTCGTCGCTTGAAGTATACTTGGAAGTCTGCTGCTTACCATTCAATCAGGAAACGAATTACTGAGAAAAAAGATCAACCATGCAGGCAGTATAATCCATGTACGTGCCAAACAGCTTGTGGAAAGCAGTGTAGTTGTCTTCTAAATGGGACATGTTGTGAGAAGTACTGTGGGTGTCCTAAGAGTTGCAAGAATAGATTTAGAGGCTGTCATTGTGCTAAAAGTCAATGCCGAAGTCGTCAATGCCCATGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGCTGGGTTAGTTGTGGTGATGGTAGTCTTGGGGTTCCAAACCAAAGAGGTGATAATTATGAGTGTAGAAATATGAAGCTTCTTCTGAAACAACAACAAAGGGTCTTACTTGGAAGATCTGATGTTTCTGGCTGGGGTGCTTTCTTAAAGAATAGCGTCAGCAAGCATGAATACCTTGGTGAGTATACTGGGGAGTTGATCTCACACCGCGAAGCAGATAAGCGTGGAAAAATATACGACCGGGAAAATTCATCATTTCTCTTCAATCTGAATGATCAGTTTGTTCTTGATGCCTATCGGAAGGGTGATAAATTGAAGTTTGCCAACCACTCTCCAGATCCAAATTGCTACGCGAAGGTCATTATGGTTGCTGGAGATCACAGGGTGGGTATATTTGCCAAGGAACGAATTGCTTCGGGAGAAGAACTTTTCTATGATTACCGTTATGAGCCAGATAGAGCTCCTGCTTGGGCTCGGAAGCCTGAGGCATCCGGGTCAAAAAGGGACGATGGTGCCCCCTCAAGTGGTCGCGCAAAGAAGCTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0003727 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006139 GO:0006325 GO:0006342 GO:0006349 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009292 GO:0009294 GO:0009653 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009965 GO:0009987 GO:0010016 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016278 GO:0016279 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0017053 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0040030 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045814 GO:0045857 GO:0045892 GO:0045934 GO:0046483 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048586 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0070013 GO:0070734 GO:0071514 GO:0071704 GO:0071840 GO:0080090 GO:0090568 GO:0097159 GO:0099402 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00310 ko05206 map00310 map05206
Pfam Domains
Protein Families
SET

Protein Analysis

913

Amino Acids

102.61

Weight (kDa)

8.26

Isoelectric Point (pI)

54.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HTH_CLF_N PF25996 212 - 255 6.3e-20 Histone-lysine N-methyltransferase CLF, N-terminal HTH domain
preSET_CXC PF18264 702 - 733 8.7e-08 CXC domain
SET PF00856 775 - 878 2.7e-19 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 237, 767
AarI CACCTGC 1 cut(s) 1576
Acc36I ACCTGC 2 cut(s) 1576, 1740
AccB1I GGYRCC 1 cut(s) 2705
AccI GTMKAC 2 cut(s) 1916, 2378
AccII CGCG 3 cut(s) 2403, 2546, 2724
AccIII TCCGGA 1 cut(s) 451
AciI CCGC 4 cut(s) 26, 470, 1808, 2401
AclWI GGATC 7 cut(s) 528, 686, 945, 1220, 1556, 2168, 2525
AcsI RAATTY 2 cut(s) 546, 2440
AcuI CTGAAG 3 cut(s) 666, 759, 1517
AdeI CACNNNGTG 1 cut(s) 2578
AfaI GTAC 4 cut(s) 996, 1026, 2002, 2066
AfiI CCNNNNNNNGG 2 cut(s) 1473, 2717
AflIII ACRYGT 1 cut(s) 2051
AhlI ACTAGT 2 cut(s) 1430, 1574
AjnI CCWGG 2 cut(s) 277, 1199
Alw21I GWGCWC 1 cut(s) 2656
Alw26I GTCTC 2 cut(s) 178, 691
AlwI GGATC 7 cut(s) 528, 686, 945, 1220, 1556, 2168, 2525
Aor13HI TCCGGA 1 cut(s) 451
AoxI GGCC 1 cut(s) 102
ApeKI GCWGC 5 cut(s) 328, 860, 1817, 1931, 2156
ApoI RAATTY 2 cut(s) 546, 2440
Asp700I GAANNNNTTC 1 cut(s) 2605
AspLEI GCGC 1 cut(s) 2726
AspS9I GGNCC 2 cut(s) 103, 1004
AsuC2I CCSGG 2 cut(s) 2435, 2686
AsuHPI GGTGA 9 cut(s) 350, 581, 1482, 1535, 1823, 2222, 2255, 2384, 2510
AsuII TTCGAA 1 cut(s) 161
AvaII GGWCC 1 cut(s) 1004
AxyI CCTNAGG 1 cut(s) 2676
BaeGI GKGCMC 1 cut(s) 2710
BanI GGYRCC 1 cut(s) 2705
BanII GRGCYC 2 cut(s) 2656, 2668
BarI GAAGNNNNNNTAC 2 cut(s) 639, 671
BbsI GAAGAC 4 cut(s) 654, 819, 1431, 2030
Bbv12I GWGCWC 1 cut(s) 2656
BbvI GCAGC 5 cut(s) 315, 872, 1804, 1918, 2143
BccI CCATC 5 cut(s) 371, 1361, 1529, 2207, 2696
BcgI CGANNNNNNTGC 2 cut(s) 1025, 1059
BciT130I CCWGG 2 cut(s) 279, 1201
BciVI GTATCC 1 cut(s) 285
BclI TGATCA 3 cut(s) 556, 1554, 2467
BcnI CCSGG 2 cut(s) 2435, 2686
BcoDI GTCTC 2 cut(s) 178, 691
BcuI ACTAGT 2 cut(s) 1430, 1574
BfaI CTAG 6 cut(s) 404, 726, 1113, 1431, 1479, 1575
BfmI CTRYAG 2 cut(s) 143, 2157
BfuAI ACCTGC 2 cut(s) 1576, 1740
BfuI GTATCC 1 cut(s) 285
BglII AGATCT 3 cut(s) 850, 1400, 2309
BisI GCNGC 6 cut(s) 26, 329, 861, 1818, 1932, 2157
BlsI GCNGC 6 cut(s) 27, 330, 862, 1819, 1933, 2158
BmcAI AGTACT 1 cut(s) 2066
Bme1390I CCNGG 4 cut(s) 279, 1201, 2435, 2686
Bme18I GGWCC 1 cut(s) 1004
BmgT120I GGNCC 2 cut(s) 103, 1004
BmiI GGNNCC 5 cut(s) 36, 388, 1730, 2229, 2707
BmrFI CCNGG 4 cut(s) 279, 1201, 2435, 2686
BmrI ACTGGG 1 cut(s) 2391
BmsI GCATC 6 cut(s) 307, 847, 887, 1804, 2473, 2690
BmuI ACTGGG 1 cut(s) 2391
BpiI GAAGAC 4 cut(s) 654, 819, 1431, 2030
BplI GAGNNNNNCTC 2 cut(s) 2378, 2410
BpmI CTGGAG 4 cut(s) 722, 963, 2511, 2586
Bpu14I TTCGAA 1 cut(s) 161
BpuEI CTTGAG 2 cut(s) 354, 2698
BpuMI CCSGG 2 cut(s) 2435, 2686
Bsa29I ATCGAT 1 cut(s) 1018
BsaAI YACGTR 2 cut(s) 1886, 2004
BsaBI GATNNNNATC 2 cut(s) 849, 2487
BsaJI CCNNGG 6 cut(s) 166, 783, 968, 1845, 2368, 2592
BsaWI WCCGGW 1 cut(s) 451
Bsc4I CCNNNNNNNGG 2 cut(s) 1473, 2717
Bse1I ACTGG 4 cut(s) 72, 1061, 1467, 2386
Bse21I CCTNAGG 1 cut(s) 2676
Bse3DI GCAATG 1 cut(s) 364
Bse8I GATNNNNATC 2 cut(s) 849, 2487
BseAI TCCGGA 1 cut(s) 451
BseBI CCWGG 2 cut(s) 279, 1201
BseCI ATCGAT 1 cut(s) 1018
BseDI CCNNGG 6 cut(s) 166, 783, 968, 1845, 2368, 2592
BseGI GGATG 4 cut(s) 862, 932, 1213, 2681
BseJI GATNNNNATC 2 cut(s) 849, 2487
BseLI CCNNNNNNNGG 2 cut(s) 1473, 2717
BseMI GCAATG 1 cut(s) 364
BseMII CTCAG 4 cut(s) 945, 1797, 1953, 2667
BseNI ACTGG 4 cut(s) 72, 1061, 1467, 2386
BseRI GAGGAG 2 cut(s) 611, 791
BseSI GKGCMC 1 cut(s) 2710
BseXI GCAGC 5 cut(s) 315, 872, 1804, 1918, 2143
BseYI CCCAGC 2 cut(s) 2196, 2325
Bsh1236I CGCG 3 cut(s) 2403, 2546, 2724
Bsh1285I CGRYCG 1 cut(s) 2434
BshFI GGCC 1 cut(s) 104
BshNI GGYRCC 1 cut(s) 2705
BshVI ATCGAT 1 cut(s) 1018
BsiEI CGRYCG 1 cut(s) 2434
BsiHKAI GWGCWC 1 cut(s) 2656
BsiSI CCGG 3 cut(s) 452, 2434, 2685
BslFI GGGAC 2 cut(s) 2062, 2711
BslI CCNNNNNNNGG 2 cut(s) 1473, 2717
BsmAI GTCTC 2 cut(s) 178, 691
BsmFI GGGAC 2 cut(s) 2062, 2711
BsmI GAATGC 2 cut(s) 433, 1640
BsnI GGCC 1 cut(s) 104
Bsp119I TTCGAA 1 cut(s) 161
Bsp1286I GDGCHC 3 cut(s) 2656, 2668, 2710
Bsp13I TCCGGA 1 cut(s) 451
BspACI CCGC 4 cut(s) 26, 470, 1808, 2401
BspANI GGCC 1 cut(s) 104
BspCNI CTCAG 4 cut(s) 946, 1796, 1954, 2668
BspDI ATCGAT 1 cut(s) 1018
BspEI TCCGGA 1 cut(s) 451
BspFNI CGCG 3 cut(s) 2403, 2546, 2724
BspLI GGNNCC 5 cut(s) 36, 388, 1730, 2229, 2707
BspMAI CTGCAG 1 cut(s) 2161
BspMI ACCTGC 2 cut(s) 1576, 1740
BspPI GGATC 7 cut(s) 528, 686, 945, 1220, 1556, 2168, 2525
BspT104I TTCGAA 1 cut(s) 161
BspT107I GGYRCC 1 cut(s) 2705
BsrDI GCAATG 1 cut(s) 364
BsrI ACTGG 4 cut(s) 72, 1061, 1467, 2386
BssECI CCNNGG 6 cut(s) 166, 783, 968, 1845, 2368, 2592
BssNAI GTATAC 2 cut(s) 1917, 2379
BssT1I CCWWGG 3 cut(s) 1845, 2368, 2592
Bst1107I GTATAC 2 cut(s) 1917, 2379
Bst2UI CCWGG 2 cut(s) 279, 1201
Bst4CI ACNGT 7 cut(s) 167, 717, 1505, 1742, 1790, 2069, 2636
Bst6I CTCTTC 6 cut(s) 299, 612, 768, 1316, 1596, 2459
BstBAI YACGTR 2 cut(s) 1886, 2004
BstBI TTCGAA 1 cut(s) 161
BstC8I GCNNGC 3 cut(s) 1985, 2357, 2736
BstDEI CTNAG 9 cut(s) 795, 954, 1245, 1272, 1397, 1783, 1962, 2079, 2676
BstDSI CCRYGG 3 cut(s) 166, 783, 968
BstF5I GGATG 4 cut(s) 862, 932, 1213, 2681
BstFNI CGCG 3 cut(s) 2403, 2546, 2724
BstHHI GCGC 1 cut(s) 2726
BstMAI GTCTC 2 cut(s) 178, 691
BstMCI CGRYCG 1 cut(s) 2434
BstMWI GCNNNNNNNGC 4 cut(s) 363, 1324, 1710, 1814
BstNI CCWGG 2 cut(s) 279, 1201
BstNSI RCATGY 1 cut(s) 2055
BstSCI CCNGG 4 cut(s) 277, 1199, 2433, 2684
BstSFI CTRYAG 2 cut(s) 143, 2157
BstSLI GKGCMC 1 cut(s) 2710
BstSNI TACGTA 1 cut(s) 1886
BstUI CGCG 3 cut(s) 2403, 2546, 2724
BstV1I GCAGC 5 cut(s) 315, 872, 1804, 1918, 2143
BstV2I GAAGAC 4 cut(s) 654, 819, 1431, 2030
BstX2I RGATCY 5 cut(s) 850, 937, 1400, 2309, 2530
BstYI RGATCY 5 cut(s) 850, 937, 1400, 2309, 2530
BstZ17I GTATAC 2 cut(s) 1917, 2379
Bsu15I ATCGAT 1 cut(s) 1018
Bsu36I CCTNAGG 1 cut(s) 2676
BsuI GTATCC 1 cut(s) 285
BsuRI GGCC 1 cut(s) 104
BsuTUI ATCGAT 1 cut(s) 1018
BtgI CCRYGG 3 cut(s) 166, 783, 968
BtgZI GCGATG 1 cut(s) 910
BtsCI GGATG 4 cut(s) 862, 932, 1213, 2681
BtsI GCAGTG 3 cut(s) 1186, 1645, 2033
BtsIMutI CAGTG 7 cut(s) 79, 1068, 1186, 1474, 1557, 1645, 2033
BveI ACCTGC 2 cut(s) 1576, 1740
Cac8I GCNNGC 3 cut(s) 1985, 2357, 2736
CfoI GCGC 1 cut(s) 2726
Cfr13I GGNCC 2 cut(s) 103, 1004
ClaI ATCGAT 1 cut(s) 1018
CseI GACGC 1 cut(s) 2338
Csp6I GTAC 4 cut(s) 995, 1025, 2001, 2065
CviQI GTAC 4 cut(s) 995, 1025, 2001, 2065
DdeI CTNAG 9 cut(s) 795, 954, 1245, 1272, 1397, 1783, 1962, 2079, 2676
DraIII CACNNNGTG 1 cut(s) 2578
Eam1104I CTCTTC 6 cut(s) 299, 612, 768, 1316, 1596, 2459
EarI CTCTTC 6 cut(s) 299, 612, 768, 1316, 1596, 2459
Ecl136II GAGCTC 1 cut(s) 2654
Eco105I TACGTA 1 cut(s) 1886
Eco130I CCWWGG 3 cut(s) 1845, 2368, 2592
Eco24I GRGCYC 2 cut(s) 2656, 2668
Eco47I GGWCC 1 cut(s) 1004
Eco53kI GAGCTC 1 cut(s) 2654
Eco57I CTGAAG 3 cut(s) 666, 759, 1517
Eco81I CCTNAGG 1 cut(s) 2676
EcoICRI GAGCTC 1 cut(s) 2654
EcoRII CCWGG 2 cut(s) 277, 1199
EcoT14I CCWWGG 3 cut(s) 1845, 2368, 2592
EcoT22I ATGCAT 1 cut(s) 322
EcoT38I GRGCYC 2 cut(s) 2656, 2668
ErhI CCWWGG 3 cut(s) 1845, 2368, 2592
FalI AAGNNNNNCTT 2 cut(s) 801, 833
FaqI GGGAC 2 cut(s) 2062, 2711
FauI CCCGC 1 cut(s) 1801
FbaI TGATCA 3 cut(s) 556, 1554, 2467
FblI GTMKAC 2 cut(s) 1916, 2378
Fnu4HI GCNGC 6 cut(s) 26, 329, 861, 1818, 1932, 2157
FokI GGATG 4 cut(s) 869, 939, 1220, 2668
FriOI GRGCYC 2 cut(s) 2656, 2668
Fsp4HI GCNGC 6 cut(s) 26, 329, 861, 1818, 1932, 2157
FspBI CTAG 6 cut(s) 404, 726, 1113, 1431, 1479, 1575
GlaI GCGC 1 cut(s) 2725
GluI GCNGC 6 cut(s) 26, 329, 861, 1818, 1932, 2157
GsaI CCCAGC 2 cut(s) 2200, 2329
GsuI CTGGAG 4 cut(s) 722, 963, 2511, 2586
HaeIII GGCC 1 cut(s) 104
HapII CCGG 3 cut(s) 452, 2434, 2685
HgaI GACGC 1 cut(s) 2338
HhaI GCGC 1 cut(s) 2726
Hin6I GCGC 1 cut(s) 2724
HinP1I GCGC 1 cut(s) 2724
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HindIII AAGCTT 4 cut(s) 446, 1394, 2270, 2732
HpaII CCGG 3 cut(s) 452, 2434, 2685
HphI GGTGA 9 cut(s) 350, 581, 1482, 1535, 1823, 2222, 2255, 2384, 2510
Hpy166II GTNNAC 3 cut(s) 292, 1917, 2379
Hpy8I GTNNAC 3 cut(s) 292, 1917, 2379
Hpy99I CGWCG 1 cut(s) 1908
HpyAV CCTTC 9 cut(s) 1031, 1114, 1141, 1467, 1492, 1829, 1885, 2488, 2542
HpyCH4III ACNGT 7 cut(s) 167, 717, 1505, 1742, 1790, 2069, 2636
HpyCH4IV ACGT 2 cut(s) 1885, 2003
HpyF10VI GCNNNNNNNGC 4 cut(s) 363, 1324, 1710, 1814
HpyF3I CTNAG 9 cut(s) 795, 954, 1245, 1272, 1397, 1783, 1962, 2079, 2676
HpySE526I ACGT 2 cut(s) 1885, 2003
HspAI GCGC 1 cut(s) 2724
Kpn2I TCCGGA 1 cut(s) 451
Ksp22I TGATCA 3 cut(s) 556, 1554, 2467
LmnI GCTCC 2 cut(s) 354, 2659
Lsp1109I GCAGC 5 cut(s) 315, 872, 1804, 1918, 2143
LweI GCATC 6 cut(s) 307, 847, 887, 1804, 2473, 2690
MaeI CTAG 6 cut(s) 404, 726, 1113, 1431, 1479, 1575
MaeII ACGT 2 cut(s) 1885, 2003
MaeIII GTNAC 3 cut(s) 76, 220, 1505
MfeI CAATTG 1 cut(s) 606
MflI RGATCY 5 cut(s) 850, 937, 1400, 2309, 2530
MhlI GDGCHC 3 cut(s) 2656, 2668, 2710
MlyI GAGTC 4 cut(s) 713, 788, 982, 1681
Mph1103I ATGCAT 1 cut(s) 322
MroI TCCGGA 1 cut(s) 451
MroXI GAANNNNTTC 1 cut(s) 2605
MseI TTAA 7 cut(s) 324, 444, 459, 672, 1718, 2339, 2740
MslI CAYNNNNRTG 1 cut(s) 2002
MspA1I CMGCKG 1 cut(s) 1713
MspI CCGG 3 cut(s) 452, 2434, 2685
MspR9I CCNGG 4 cut(s) 279, 1201, 2435, 2686
MunI CAATTG 1 cut(s) 606
Mva1269I GAATGC 2 cut(s) 433, 1640
MvaI CCWGG 2 cut(s) 279, 1201
MvnI CGCG 3 cut(s) 2403, 2546, 2724
MwoI GCNNNNNNNGC 4 cut(s) 363, 1324, 1710, 1814
NciI CCSGG 2 cut(s) 2435, 2686
NlaIV GGNNCC 5 cut(s) 36, 388, 1730, 2229, 2707
NmuCI GTSAC 2 cut(s) 76, 220
NsiI ATGCAT 1 cut(s) 322
NspI RCATGY 1 cut(s) 2055
NspV TTCGAA 1 cut(s) 161
PaqCI CACCTGC 1 cut(s) 1576
PciI ACATGT 1 cut(s) 2051
PctI GAATGC 2 cut(s) 433, 1640
PdmI GAANNNNTTC 1 cut(s) 2605
PkrI GCNGC 6 cut(s) 27, 330, 862, 1819, 1933, 2158
PleI GAGTC 4 cut(s) 712, 787, 981, 1680
PpsI GAGTC 4 cut(s) 712, 787, 981, 1680
Ppu21I YACGTR 2 cut(s) 1886, 2004
PscI ACATGT 1 cut(s) 2051
PsiI TTATAA 2 cut(s) 237, 767
Psp124BI GAGCTC 1 cut(s) 2656
Psp6I CCWGG 2 cut(s) 277, 1199
PspFI CCCAGC 2 cut(s) 2196, 2325
PspGI CCWGG 2 cut(s) 277, 1199
PspN4I GGNNCC 5 cut(s) 36, 388, 1730, 2229, 2707
PspPI GGNCC 2 cut(s) 103, 1004
PstI CTGCAG 1 cut(s) 2161
PsuI RGATCY 5 cut(s) 850, 937, 1400, 2309, 2530
PvuII CAGCTG 1 cut(s) 1713
RsaI GTAC 4 cut(s) 996, 1026, 2002, 2066
RsaNI GTAC 4 cut(s) 995, 1025, 2001, 2065
RseI CAYNNNNRTG 1 cut(s) 2002
SacI GAGCTC 1 cut(s) 2656
SaqAI TTAA 7 cut(s) 324, 444, 459, 672, 1718, 2339, 2740
SatI GCNGC 6 cut(s) 26, 329, 861, 1818, 1932, 2157
Sau96I GGNCC 2 cut(s) 103, 1004
ScaI AGTACT 1 cut(s) 2066
SchI GAGTC 4 cut(s) 713, 788, 982, 1681
ScrFI CCNGG 4 cut(s) 279, 1201, 2435, 2686
SduI GDGCHC 3 cut(s) 2656, 2668, 2710
SfaNI GCATC 6 cut(s) 307, 847, 887, 1804, 2473, 2690
SfcI CTRYAG 2 cut(s) 143, 2157
SfuI TTCGAA 1 cut(s) 161
SinI GGWCC 1 cut(s) 1004
SmiMI CAYNNNNRTG 1 cut(s) 2002
SmlI CTYRAG 2 cut(s) 369, 2713
SmoI CTYRAG 2 cut(s) 369, 2713
SnaBI TACGTA 1 cut(s) 1886
SpeI ACTAGT 2 cut(s) 1430, 1574
SsiI CCGC 4 cut(s) 26, 470, 1808, 2401
SspMI CTAG 6 cut(s) 404, 726, 1113, 1431, 1479, 1575
SstI GAGCTC 1 cut(s) 2656
StyD4I CCNGG 4 cut(s) 277, 1199, 2433, 2684
StyI CCWWGG 3 cut(s) 1845, 2368, 2592
TaaI ACNGT 7 cut(s) 167, 717, 1505, 1742, 1790, 2069, 2636
TaiI ACGT 2 cut(s) 1888, 2006
TaqI TCGA 4 cut(s) 161, 538, 1018, 1680
TatI WGTACW 1 cut(s) 2064
TauI GCSGC 1 cut(s) 28
Tru1I TTAA 7 cut(s) 324, 444, 459, 672, 1718, 2339, 2740
Tru9I TTAA 7 cut(s) 324, 444, 459, 672, 1718, 2339, 2740
TscAI CASTG 7 cut(s) 79, 1068, 1186, 1474, 1564, 1645, 2033
TseFI GTSAC 2 cut(s) 76, 220
TseI GCWGC 5 cut(s) 328, 860, 1817, 1931, 2156
Tsp45I GTSAC 2 cut(s) 76, 220
TspGWI ACGGA 4 cut(s) 772, 818, 985, 1042
TspRI CASTG 7 cut(s) 79, 1068, 1186, 1474, 1564, 1645, 2033
VpaK11BI GGWCC 1 cut(s) 1004
XapI RAATTY 2 cut(s) 546, 2440
XbaI TCTAGA 3 cut(s) 403, 725, 1112
XceI RCATGY 1 cut(s) 2055
XcmI CCANNNNNNNNNTGG 1 cut(s) 2015
XmiI GTMKAC 2 cut(s) 1916, 2378
XmnI GAANNNNTTC 1 cut(s) 2605
XspI CTAG 6 cut(s) 404, 726, 1113, 1431, 1479, 1575
ZrmI AGTACT 1 cut(s) 2066
Zsp2I ATGCAT 1 cut(s) 322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.