Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0016600

Physical Location & Seq

Genomic Coordinates Reverse (-)

26841317 .. 26843188

Gene Structure 1872 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1290500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGTCCTCAACCGCCACTTTGGCCACCACCGCACCCACTCACCACCACCGCCACCGCCACCACCCACCTTCAATTGACAGACTCACATTCCTAATCGACAAGTCAAAATCCATCAACCACCTTCTCCAAATTCACGCCCTTCTCCTCCGTCACGGTCTCCACCACCACCCAATCCTGAACTTCAAGCTCCAACGCTCTTACACCTCGTTCGGCCGCCTCGACCACTCCGTCGCCCTTTTCCACCGCACCGACAACCCCACTGTCTACTTCTGGACCTCCATTATCCACAGCCATGCCCAGTTGGGTCTTCAGAACCTTGCCCTCATGTACTTCACCGAGATGCTCACCAATGGCGTTGAACCCAATTGCTTCACCTTCTCCGCTGTTATGAAAACTTGCCCGCTTGAGCCCGGAAAAGCACTCCATTCCCAGACGATTAAGCTCGGGCTCGATTCGGATTTGTATGTCAGGACTGGTCTTGTGGATGTTTACGCAAGAGCCGGCGATGTTGTGTCTGCAAGGCAGCTGTTTGATACAATGCCTGAGAAGAGTTTGGTTTCGCTGACTGCGATGATCACTAGCTATGCGAAAAGAGGGGCAATTGAGGCGGCCCGCAAACTGTTTGACGGAATGCAGGAGAGAGATGTGGTTTGTTGGAATGTGATGATTGATGGGTATGCTCAGCATGGGATGCCAAATGAGGCTTTGTTTTTGTTTAGGAAAATGCTGGCGGCAAAGTTTAAGCCGAACGAATTGACCGTGCTGTCTTTGCTTTCTGCTTGTGGGCAGCTTGGAGCTCTTGAGTCTGGTCGATGGCTTCATTCTTACATTGAAAATAATCGAATTCGAGTCAATGCTCATGTGGGCACTGCATTGATTGACATGTACAGTAAATGTGGTGGCTTGGAGGATGCTCGTCTGGTTTTTGATAGGATTCAGGAGAAGGACGTTGTTGTTTGGAATTCGATGGTTGTAGGATATGCGATGCACGGATTTAGCCAAGATGCATTGCAGTTGTTCATTGAAATGTGTAGAATTGGTTACCGTCCTACTGATATAACCTTCATCGGAGTTTTGACTGCTTGTGCTTATGCTGGTTTGGTCAACAAGGGACGGGCTTTTTTCAGTTCAATGAAGGATGAATACGGAATAGAACCGAAGATTGAGCATTACGGGTGCATGGTAAATCTCCTTAGCCGTGCTGGGCAGCTGGAAGAAGCATACGAGTTTGTGAAGAAAATGAAGATTGATCCTGATCCTGTCCTATGGGGAACTTTACTTGGGGCTTGTAGACTCCATGGTAACATTGCTTTGGGAGAGGAGATAGCAGAGTTTCTCCTTGGCCAAAATCTTGCAAATTCAGGAACATATATTCTACTGTCCAACATCTACGCCGCAGCGGGGAACTGGGATGGGGTGGCAAGGGTGAGGGCCTTGATGAAAAGCAGTGGGATTCAGAAGGAGCCCGGTTGCAGCTCCATTGAAGTGGATAATAAGGTACACGAGTTCCTTGCAGGGGATAGGAGAAACCCGAGGAGCAAAGAAATATACACGATGATCGAGGAGATGAACCGTTGGCTCAAGGCTCATGGTTACACCCCACAGGTAGATACTGTGTTACATGATCTGGGGGACAAAGAAAAGGAGCAATCCCTTGAAGTTCACAGTGAGAAGCTTGCTCTTGCTTTCGGGCTAATCAGCACACAAGCTGGAACAACAATCAAAATAGTGAAAAACCTACGCGTGTGTTCGGATTGTCACGCTGTGACCAAGTTACTTTCGAAAATCACGGGCCGAAAGATTGTAATGCGGGACAGAAATAGGTTTCACCACTTTGTACATGGTTCGTGCTCTTGTGGCGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

624

Amino Acids

69.89

Weight (kDa)

8.51

Isoelectric Point (pI)

40.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	86 - 133	1.5e-07	PPR repeat family
PPR_3	PF13812	87 - 133	9.9e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	214 - 261	2.7e-11	PPR repeat family
PPR	PF01535	217 - 244	2.4e-08	PPR repeat
PPR_2	PF13041	315 - 363	1.7e-07	PPR repeat family
PPR	PF01535	318 - 347	8.2e-06	PPR repeat
E_motif	PF20431	433 - 495	4.7e-20	E motif
DYW_deaminase	PF14432	531 - 623	7.4e-41	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0016600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37380
fragaria_vesca	FvH4_1g16950
malus_domestica	MD15G1290500.v1.1
prunus_persica	Prupe.6G226400_v2.0.a1
pyrus_communis	pycom15g25420
rosa_chinensis	RchiOBHm_Chr2g0107031
rosa_laevigata	RLG00000017551
rosa_multiflora	Rmu_sc0007106.1_g000001
rosa_roxburghii	Rroxscaffold_2G00136670
rosa_rugosa	Rorug02G0140000
rosa_samantha	Rh2BG202400 Rh2CG195600 Rh2DG197900
rosa_wichuraiana	Rw2G015050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	227, 763
AccI	GTMKAC	2 cut(s)	264, 1291
AccII	CGCG	1 cut(s)	1743
AclWI	GGATC	2 cut(s)	1244, 1250
AcoI	YGGCCR	3 cut(s)	21, 211, 1342
AcsI	RAATTY	4 cut(s)	129, 843, 961, 1357
AcuI	CTGAAG	1 cut(s)	293
AdeI	CACNNNGTG	1 cut(s)	1765
AfaI	GTAC	4 cut(s)	329, 887, 1500, 1839
AfiI	CCNNNNNNNGG	2 cut(s)	1401, 1516
AflIII	ACRYGT	2 cut(s)	882, 1741
AgsI	TTSAA	8 cut(s)	72, 184, 359, 833, 1025, 1131, 1484, 1658
Alw21I	GWGCWC	2 cut(s)	799, 1853
Alw26I	GTCTC	1 cut(s)	161
AlwI	GGATC	2 cut(s)	1244, 1250
Ama87I	CYCGRG	2 cut(s)	443, 1531
AoxI	GGCC	6 cut(s)	21, 211, 609, 1342, 1431, 1792
ApeKI	GCWGC	5 cut(s)	523, 787, 1207, 1397, 1473
ApoI	RAATTY	4 cut(s)	129, 843, 961, 1357
AspS9I	GGNCC	4 cut(s)	273, 610, 1431, 1792
AsuC2I	CCSGG	2 cut(s)	411, 1467
AsuHPI	GGTGA	6 cut(s)	32, 325, 337, 364, 1438, 1820
AsuII	TTCGAA	1 cut(s)	1781
AvaI	CYCGRG	2 cut(s)	443, 1531
AvaII	GGWCC	1 cut(s)	273
BaeGI	GKGCMC	1 cut(s)	869
BaeI	ACNNNNGTAYC	2 cut(s)	1490, 1523
BalI	TGGCCA	2 cut(s)	23, 1344
BanII	GRGCYC	4 cut(s)	411, 450, 799, 1467
BarI	GAAGNNNNNNTAC	2 cut(s)	1127, 1159
BauI	CACGAG	1 cut(s)	1502
BbsI	GAAGAC	1 cut(s)	299
Bbv12I	GWGCWC	2 cut(s)	799, 1853
BbvI	GCAGC	5 cut(s)	535, 799, 1219, 1409, 1485
BccI	CCATC	5 cut(s)	119, 665, 807, 961, 1406
BceAI	ACGGC	1 cut(s)	1182
BcgI	CGANNNNNNTGC	2 cut(s)	1493, 1527
BclI	TGATCA	1 cut(s)	573
BcnI	CCSGG	2 cut(s)	411, 1467
BcoDI	GTCTC	1 cut(s)	161
BfaI	CTAG	1 cut(s)	579
BglI	GCCNNNNNGGC	1 cut(s)	20
BisI	GCNGC	9 cut(s)	214, 524, 609, 732, 788, 1208, 1395, 1398, 1474
BlpI	GCTNAGC	1 cut(s)	681
BlsI	GCNGC	9 cut(s)	215, 525, 610, 733, 789, 1209, 1396, 1399, 1475
Bme1390I	CCNGG	2 cut(s)	411, 1467
Bme18I	GGWCC	1 cut(s)	273
BmeT110I	CYCGRG	2 cut(s)	443, 1531
BmgT120I	GGNCC	4 cut(s)	273, 610, 1431, 1792
BmiI	GGNNCC	1 cut(s)	1464
BmrFI	CCNGG	2 cut(s)	411, 1467
BmrI	ACTGGG	2 cut(s)	292, 1417
BmsI	GCATC	5 cut(s)	330, 681, 901, 975, 994
BmuI	ACTGGG	2 cut(s)	292, 1417
BpiI	GAAGAC	1 cut(s)	299
Bpu10I	CCTNAGC	1 cut(s)	1193
Bpu1102I	GCTNAGC	1 cut(s)	681
Bpu14I	TTCGAA	1 cut(s)	1781
BpuEI	CTTGAG	3 cut(s)	425, 821, 1565
BpuMI	CCSGG	2 cut(s)	411, 1467
BsaBI	GATNNNNATC	1 cut(s)	1254
BsaI	GGTCTC	1 cut(s)	161
BsaJI	CCNNGG	3 cut(s)	1297, 1339, 1532
Bsc4I	CCNNNNNNNGG	2 cut(s)	1401, 1516
Bse118I	RCCGGY	1 cut(s)	500
Bse1I	ACTGG	4 cut(s)	298, 478, 1412, 1871
Bse3DI	GCAATG	2 cut(s)	1007, 1305
Bse8I	GATNNNNATC	1 cut(s)	1254
BseDI	CCNNGG	3 cut(s)	1297, 1339, 1532
BseGI	GGATG	5 cut(s)	490, 696, 916, 1144, 1417
BseJI	GATNNNNATC	1 cut(s)	1254
BseLI	CCNNNNNNNGG	2 cut(s)	1401, 1516
BseMI	GCAATG	2 cut(s)	1007, 1305
BseMII	CTCAG	2 cut(s)	534, 695
BseNI	ACTGG	4 cut(s)	298, 478, 1412, 1871
BseRI	GAGGAG	4 cut(s)	134, 1334, 1549, 1577
BseSI	GKGCMC	1 cut(s)	869
BseX3I	CGGCCG	1 cut(s)	211
BseXI	GCAGC	5 cut(s)	535, 799, 1219, 1409, 1485
BseYI	CCCAGC	1 cut(s)	1202
Bsh1236I	CGCG	1 cut(s)	1743
Bsh1285I	CGRYCG	1 cut(s)	214
BshFI	GGCC	6 cut(s)	23, 213, 611, 1344, 1433, 1794
BsiEI	CGRYCG	1 cut(s)	214
BsiHKAI	GWGCWC	2 cut(s)	799, 1853
BsiHKCI	CYCGRG	2 cut(s)	443, 1531
BsiSI	CCGG	3 cut(s)	411, 501, 1467
BslFI	GGGAC	3 cut(s)	1125, 1646, 1826
BslI	CCNNNNNNNGG	2 cut(s)	1401, 1516
BsmAI	GTCTC	1 cut(s)	161
BsmFI	GGGAC	3 cut(s)	1125, 1646, 1826
BsmI	GAATGC	1 cut(s)	636
BsnI	GGCC	6 cut(s)	23, 213, 611, 1344, 1433, 1794
Bso31I	GGTCTC	1 cut(s)	161
BsoBI	CYCGRG	2 cut(s)	443, 1531
Bsp119I	TTCGAA	1 cut(s)	1781
Bsp1286I	GDGCHC	6 cut(s)	411, 450, 799, 869, 1467, 1853
Bsp1407I	TGTACA	2 cut(s)	885, 1837
Bsp143I	GATC	5 cut(s)	573, 1249, 1255, 1557, 1624
Bsp1720I	GCTNAGC	1 cut(s)	681
Bsp19I	CCATGG	1 cut(s)	1297
BspANI	GGCC	6 cut(s)	23, 213, 611, 1344, 1433, 1794
BspCNI	CTCAG	2 cut(s)	535, 694
BspFNI	CGCG	1 cut(s)	1743
BspLI	GGNNCC	1 cut(s)	1464
BspPI	GGATC	2 cut(s)	1244, 1250
BspT104I	TTCGAA	1 cut(s)	1781
BspTNI	GGTCTC	1 cut(s)	161
BsrDI	GCAATG	2 cut(s)	1007, 1305
BsrFI	RCCGGY	1 cut(s)	500
BsrGI	TGTACA	2 cut(s)	885, 1837
BsrI	ACTGG	4 cut(s)	298, 478, 1412, 1871
BssAI	RCCGGY	1 cut(s)	500
BssECI	CCNNGG	3 cut(s)	1297, 1339, 1532
BssMI	GATC	5 cut(s)	573, 1249, 1255, 1557, 1624
BssSI	CACGAG	1 cut(s)	1502
BssT1I	CCWWGG	2 cut(s)	1297, 1339
Bst2BI	CACGAG	1 cut(s)	1502
Bst6I	CTCTTC	1 cut(s)	542
BstAPI	GCANNNNNTGC	1 cut(s)	691
BstAUI	TGTACA	2 cut(s)	885, 1837
BstBI	TTCGAA	1 cut(s)	1781
BstC8I	GCNNGC	5 cut(s)	401, 502, 613, 729, 1677
BstDEI	CTNAG	3 cut(s)	543, 681, 1193
BstDSI	CCRYGG	1 cut(s)	1297
BstEII	GGTNACC	1 cut(s)	1040
BstF5I	GGATG	5 cut(s)	490, 696, 916, 1144, 1417
BstFNI	CGCG	1 cut(s)	1743
BstKTI	GATC	5 cut(s)	576, 1252, 1258, 1560, 1627
BstMAI	GTCTC	1 cut(s)	161
BstMBI	GATC	5 cut(s)	573, 1249, 1255, 1557, 1624
BstMCI	CGRYCG	1 cut(s)	214
BstMWI	GCNNNNNNNGC	6 cut(s)	20, 29, 605, 691, 769, 1857
BstNSI	RCATGY	1 cut(s)	886
BstPI	GGTNACC	1 cut(s)	1040
BstSCI	CCNGG	2 cut(s)	409, 1465
BstSLI	GKGCMC	1 cut(s)	869
BstUI	CGCG	1 cut(s)	1743
BstV1I	GCAGC	5 cut(s)	535, 799, 1219, 1409, 1485
BstV2I	GAAGAC	1 cut(s)	299
BstXI	CCANNNNNNTGG	1 cut(s)	1486
BstZI	CGGCCG	1 cut(s)	211
BsuRI	GGCC	6 cut(s)	23, 213, 611, 1344, 1433, 1794
BtgI	CCRYGG	1 cut(s)	1297
BtgZI	GCGATG	3 cut(s)	519, 584, 998
BtsCI	GGATG	5 cut(s)	490, 696, 916, 1144, 1417
BtsI	GCAGTG	2 cut(s)	867, 1453
BtsIMutI	CAGTG	4 cut(s)	258, 867, 1453, 1672
Cac8I	GCNNGC	5 cut(s)	401, 502, 613, 729, 1677
Cfr10I	RCCGGY	1 cut(s)	500
Cfr13I	GGNCC	4 cut(s)	273, 610, 1431, 1792
Csp6I	GTAC	4 cut(s)	328, 886, 1499, 1838
CviQI	GTAC	4 cut(s)	328, 886, 1499, 1838
DdeI	CTNAG	3 cut(s)	543, 681, 1193
DpnI	GATC	5 cut(s)	575, 1251, 1257, 1559, 1626
DpnII	GATC	5 cut(s)	573, 1249, 1255, 1557, 1624
DraIII	CACNNNGTG	1 cut(s)	1765
DrdI	GACNNNNNNGTC	2 cut(s)	227, 763
DseDI	GACNNNNNNGTC	2 cut(s)	227, 763
EaeI	YGGCCR	3 cut(s)	21, 211, 1342
EagI	CGGCCG	1 cut(s)	211
Eam1104I	CTCTTC	1 cut(s)	542
EarI	CTCTTC	1 cut(s)	542
Ecl136II	GAGCTC	1 cut(s)	797
EclXI	CGGCCG	1 cut(s)	211
Eco130I	CCWWGG	2 cut(s)	1297, 1339
Eco24I	GRGCYC	4 cut(s)	411, 450, 799, 1467
Eco31I	GGTCTC	1 cut(s)	161
Eco47I	GGWCC	1 cut(s)	273
Eco52I	CGGCCG	1 cut(s)	211
Eco53kI	GAGCTC	1 cut(s)	797
Eco57I	CTGAAG	1 cut(s)	293
Eco88I	CYCGRG	2 cut(s)	443, 1531
Eco91I	GGTNACC	1 cut(s)	1040
EcoICRI	GAGCTC	1 cut(s)	797
EcoO109I	RGGNCCY	1 cut(s)	1431
EcoO65I	GGTNACC	1 cut(s)	1040
EcoRI	GAATTC	2 cut(s)	843, 961
EcoT14I	CCWWGG	2 cut(s)	1297, 1339
EcoT22I	ATGCAT	1 cut(s)	1009
EcoT38I	GRGCYC	4 cut(s)	411, 450, 799, 1467
ErhI	CCWWGG	2 cut(s)	1297, 1339
FaqI	GGGAC	3 cut(s)	1125, 1646, 1826
FauI	CCCGC	4 cut(s)	408, 620, 1393, 1803
FbaI	TGATCA	1 cut(s)	573
FblI	GTMKAC	2 cut(s)	264, 1291
Fnu4HI	GCNGC	9 cut(s)	214, 524, 609, 732, 788, 1208, 1395, 1398, 1474
FokI	GGATG	5 cut(s)	497, 703, 923, 1151, 1424
FriOI	GRGCYC	4 cut(s)	411, 450, 799, 1467
Fsp4HI	GCNGC	9 cut(s)	214, 524, 609, 732, 788, 1208, 1395, 1398, 1474
FspBI	CTAG	1 cut(s)	579
GluI	GCNGC	9 cut(s)	214, 524, 609, 732, 788, 1208, 1395, 1398, 1474
GsaI	CCCAGC	1 cut(s)	1206
HaeIII	GGCC	6 cut(s)	23, 213, 611, 1344, 1433, 1794
HapII	CCGG	3 cut(s)	411, 501, 1467
HincII	GTYRAC	1 cut(s)	1105
HindII	GTYRAC	1 cut(s)	1105
HindIII	AAGCTT	1 cut(s)	1673
HinfI	GANTC	7 cut(s)	81, 452, 803, 849, 934, 1293, 1453
HpaII	CCGG	3 cut(s)	411, 501, 1467
HphI	GGTGA	6 cut(s)	32, 325, 337, 364, 1438, 1820
Hpy166II	GTNNAC	6 cut(s)	265, 490, 1105, 1292, 1501, 1663
Hpy188I	TCNGA	5 cut(s)	312, 457, 1070, 1458, 1753
Hpy188III	TCNNGA	7 cut(s)	175, 271, 469, 800, 938, 1253, 1362
Hpy8I	GTNNAC	6 cut(s)	265, 490, 1105, 1292, 1501, 1663
Hpy99I	CGWCG	1 cut(s)	233
HpyAV	CCTTC	8 cut(s)	78, 131, 149, 385, 937, 1072, 1129, 1453
HpyCH4IV	ACGT	1 cut(s)	948
HpyF10VI	GCNNNNNNNGC	6 cut(s)	20, 29, 605, 691, 769, 1857
HpyF3I	CTNAG	3 cut(s)	543, 681, 1193
HpySE526I	ACGT	1 cut(s)	948
KroI	GCCGGC	1 cut(s)	500
KroNI	GCCGGC	1 cut(s)	502
Ksp22I	TGATCA	1 cut(s)	573
Kzo9I	GATC	5 cut(s)	573, 1249, 1255, 1557, 1624
LmnI	GCTCC	6 cut(s)	192, 794, 1462, 1481, 1536, 1645
Lsp1109I	GCAGC	5 cut(s)	535, 799, 1219, 1409, 1485
LweI	GCATC	5 cut(s)	330, 681, 901, 975, 994
MaeI	CTAG	1 cut(s)	579
MaeII	ACGT	1 cut(s)	948
MaeIII	GTNAC	8 cut(s)	149, 1040, 1301, 1592, 1617, 1757, 1765, 1773
MalI	GATC	5 cut(s)	575, 1251, 1257, 1559, 1626
MboI	GATC	5 cut(s)	573, 1249, 1255, 1557, 1624
MboII	GAAGA	6 cut(s)	299, 559, 1171, 1226, 1246, 1255
MfeI	CAATTG	3 cut(s)	72, 364, 600
MhlI	GDGCHC	6 cut(s)	411, 450, 799, 869, 1467, 1853
MlsI	TGGCCA	2 cut(s)	23, 1344
MluCI	AATT	9 cut(s)	72, 129, 364, 600, 752, 843, 961, 1035, 1357
MluI	ACGCGT	1 cut(s)	1741
MluNI	TGGCCA	2 cut(s)	23, 1344
MlyI	GAGTC	4 cut(s)	75, 812, 858, 1287
MmeI	TCCRAC	3 cut(s)	214, 635, 1407
Mox20I	TGGCCA	2 cut(s)	23, 1344
Mph1103I	ATGCAT	1 cut(s)	1009
MroNI	GCCGGC	1 cut(s)	500
MscI	TGGCCA	2 cut(s)	23, 1344
MseI	TTAA	2 cut(s)	438, 741
MslI	CAYNNNNRTG	4 cut(s)	291, 338, 1025, 1484
Msp20I	TGGCCA	2 cut(s)	23, 1344
MspA1I	CMGCKG	4 cut(s)	383, 526, 1210, 1400
MspI	CCGG	3 cut(s)	411, 501, 1467
MspR9I	CCNGG	2 cut(s)	411, 1467
MunI	CAATTG	3 cut(s)	72, 364, 600
Mva1269I	GAATGC	1 cut(s)	636
MvnI	CGCG	1 cut(s)	1743
MwoI	GCNNNNNNNGC	6 cut(s)	20, 29, 605, 691, 769, 1857
NaeI	GCCGGC	1 cut(s)	502
NciI	CCSGG	2 cut(s)	411, 1467
NcoI	CCATGG	1 cut(s)	1297
NdeII	GATC	5 cut(s)	573, 1249, 1255, 1557, 1624
NgoMIV	GCCGGC	1 cut(s)	500
NlaIV	GGNNCC	1 cut(s)	1464
NmuCI	GTSAC	3 cut(s)	149, 1757, 1765
NsiI	ATGCAT	1 cut(s)	1009
NspI	RCATGY	1 cut(s)	886
NspV	TTCGAA	1 cut(s)	1781
PciI	ACATGT	1 cut(s)	882
PcsI	WCGNNNNNNNCGW	4 cut(s)	216, 225, 566, 756
PctI	GAATGC	1 cut(s)	636
PdiI	GCCGGC	1 cut(s)	502
PfeI	GAWTC	3 cut(s)	452, 934, 1453
PkrI	GCNGC	9 cut(s)	215, 525, 610, 733, 789, 1209, 1396, 1399, 1475
PleI	GAGTC	4 cut(s)	75, 811, 857, 1287
PpsI	GAGTC	4 cut(s)	75, 811, 857, 1287
PscI	ACATGT	1 cut(s)	882
Psp124BI	GAGCTC	1 cut(s)	799
PspEI	GGTNACC	1 cut(s)	1040
PspFI	CCCAGC	1 cut(s)	1202
PspN4I	GGNNCC	1 cut(s)	1464
PspPI	GGNCC	4 cut(s)	273, 610, 1431, 1792
PvuII	CAGCTG	2 cut(s)	526, 1210
RsaI	GTAC	4 cut(s)	329, 887, 1500, 1839
RsaNI	GTAC	4 cut(s)	328, 886, 1499, 1838
RseI	CAYNNNNRTG	4 cut(s)	291, 338, 1025, 1484
SacI	GAGCTC	1 cut(s)	799
SaqAI	TTAA	2 cut(s)	438, 741
SatI	GCNGC	9 cut(s)	214, 524, 609, 732, 788, 1208, 1395, 1398, 1474
Sau3AI	GATC	5 cut(s)	573, 1249, 1255, 1557, 1624
Sau96I	GGNCC	4 cut(s)	273, 610, 1431, 1792
SchI	GAGTC	4 cut(s)	75, 812, 858, 1287
ScrFI	CCNGG	2 cut(s)	411, 1467
SduI	GDGCHC	6 cut(s)	411, 450, 799, 869, 1467, 1853
SfaNI	GCATC	5 cut(s)	330, 681, 901, 975, 994
SfuI	TTCGAA	1 cut(s)	1781
SinI	GGWCC	1 cut(s)	273
SmiMI	CAYNNNNRTG	4 cut(s)	291, 338, 1025, 1484
SmlI	CTYRAG	3 cut(s)	404, 800, 1580
SmoI	CTYRAG	3 cut(s)	404, 800, 1580
Sse9I	AATT	9 cut(s)	72, 129, 364, 600, 752, 843, 961, 1035, 1357
SspMI	CTAG	1 cut(s)	579
SstI	GAGCTC	1 cut(s)	799
StyD4I	CCNGG	2 cut(s)	409, 1465
StyI	CCWWGG	2 cut(s)	1297, 1339
TaiI	ACGT	1 cut(s)	951
TaqI	TCGA	9 cut(s)	96, 219, 450, 811, 841, 847, 965, 1560, 1781
TasI	AATT	9 cut(s)	72, 129, 364, 600, 752, 843, 961, 1035, 1357
TatI	WGTACW	3 cut(s)	327, 885, 1837
TauI	GCSGC	4 cut(s)	216, 611, 734, 1397
TfiI	GAWTC	3 cut(s)	452, 934, 1453
Tru1I	TTAA	2 cut(s)	438, 741
Tru9I	TTAA	2 cut(s)	438, 741
TscAI	CASTG	4 cut(s)	265, 874, 1453, 1672
TseFI	GTSAC	3 cut(s)	149, 1757, 1765
TseI	GCWGC	5 cut(s)	523, 787, 1207, 1397, 1473
Tsp45I	GTSAC	3 cut(s)	149, 1757, 1765
TspDTI	ATGAA	9 cut(s)	404, 809, 1009, 1054, 1148, 1155, 1256, 1454, 1583
TspGWI	ACGGA	5 cut(s)	137, 217, 642, 1005, 1161
TspRI	CASTG	4 cut(s)	265, 874, 1453, 1672
VpaK11BI	GGWCC	1 cut(s)	273
XapI	RAATTY	4 cut(s)	129, 843, 961, 1357
XceI	RCATGY	1 cut(s)	886
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1838
XmiI	GTMKAC	2 cut(s)	264, 1291
XspI	CTAG	1 cut(s)	579
Zsp2I	ATGCAT	1 cut(s)	1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.