MD15G1315000.v1.1

Mitochondrial carrier protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
32027430 .. 32028459
1030 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1315000.v1.1.491

Sequence Viewer

Length: 972 bp
ATGGGTGTCAAAGGTTTTGTCGAAGGAGGCATCGCTTCTGTCATTGCCGGCTGCTCCACCCACCCTCTTGACCTCGTCAAGGTCCGAATGCAGCTCCAGGGCGAAACCCACGCCCCGAACCCCGCTCCCCAGGCAGTCCGCCCGGATTTTGCTGCCGTCCATACCGCCGCCCGACGCGGCTCCATCCCTCTCCCTCCATCACCGCCTCCTGCGGTCCGTGCGGGTCCTATCACCGTCGGGATTCGTATAATTCAGCAAGAAGGCGTCGCCGCAATGTTCTCCGGCATCTCCGCAACCATGCTCCGGCAAAGTCTCTACTCCACAACCCGCATGGGCCTCTACGACATTCTGAAGCAAAAATGGACAGACCCGACAATCCGAAACATGCCGCTCCCACGAAAAATCACAGCCGGGTTGATCGCTGGAGCCGTCGGCGCCGCCGTTGGAAACCCTGCTGACGTGGCCATGGTCCGAATGCAAGCCGACGGGAGGCTCCCGGCGGCGCAGCGCCGCAACTACAAAAGCGTGGTGGACGCCATCGTCCGCATGGTCAAGCAGGAAGGGGTGACGAGCCTTTGGCGCGGGTCGTCGCTGACGATAAACCGTGCGATGCTTGTCACGGCGTCGCAGCTGGCGTCGTACGATCAGATCAAGGAGACGATCGTGGACAATGGGATTATGCACGACGGGCTTGGGACCCACGTGACTGCGAGCTTCGCGGCGGGGTTCGTGGCGGCGGTTGCGTCGAACCCGGTGGACGTGATCAAGACTCGGGTGATGAACATGACAGTGGAGGCCGGGGCTGAGCCGCCGTACTCGGGGGCGTTGGATTGCGCTCTCAAAACGGTGCGTTCGGAGGGCCCCATGGCGCTTTATAAGGGCTTTGTGCCTACGATTTCACGGCAGGGGCCTTTTACCGTTGTGCTGTTTGTGACGCTGGAGCAGGTTCGCAAGCTGCTCAAGGATTTCTGA

Protein Analysis

324

Amino Acids

34.34

Weight (kDa)

9.96

Isoelectric Point (pI)

31.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 4 - 122 5.4e-16 Mitochondrial carrier protein
Mito_carr PF00153 129 - 223 1e-20 Mitochondrial carrier protein
Mito_carr PF00153 231 - 321 5.6e-21 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014993)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22500
fragaria_vesca FvH4_1g19840
malus_domestica MD01G1038000.v1.1 MD15G1315000.v1.1
prunus_persica Prupe.6G196900_v2.0.a1
pyrus_communis pycom01g06600 pycom15g27820
rosa_chinensis RchiOBHm_Chr2g0111661
rosa_laevigata RLG00000017915
rosa_multiflora Rmu_sc0034146.1_g000001
rosa_rugosa Rorug02G0175200
rosa_samantha Rh2AG228200 Rh2BG240400 Rh2CG231600 Rh2DG236200
rosa_wichuraiana Rw2G017610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 876
AasI GACNNNNNNGTC 1 cut(s) 539
Acc36I ACCTGC 1 cut(s) 934
AccB1I GGYRCC 1 cut(s) 434
AccBSI CCGCTC 2 cut(s) 125, 391
AccII CGCG 3 cut(s) 177, 582, 719
AcoI YGGCCR 1 cut(s) 462
AcuI CTGAAG 1 cut(s) 371
AcvI CACGTG 1 cut(s) 703
AcyI GRCGYC 5 cut(s) 264, 435, 534, 623, 635
AfaI GTAC 2 cut(s) 641, 815
AfiI CCNNNNNNNGG 4 cut(s) 79, 303, 489, 818
AjiI CACGTC 2 cut(s) 460, 760
AjnI CCWGG 2 cut(s) 96, 129
AluBI AGCT 4 cut(s) 94, 631, 714, 955
AluI AGCT 4 cut(s) 94, 631, 714, 955
Alw26I GTCTC 2 cut(s) 317, 650
Ama87I CYCGRG 2 cut(s) 771, 817
AoxI GGCC 5 cut(s) 334, 462, 795, 859, 908
ApaI GGGCCC 1 cut(s) 863
ApeKI GCWGC 6 cut(s) 51, 91, 152, 505, 628, 955
ArsI GACNNNNNNTTYG 1 cut(s) 35
AspLEI GCGC 6 cut(s) 437, 505, 510, 582, 836, 871
AspS9I GGNCC 9 cut(s) 82, 214, 224, 334, 469, 696, 859, 860, 908
AsuC2I CCSGG 5 cut(s) 143, 412, 497, 752, 799
AsuHPI GGTGA 4 cut(s) 192, 223, 577, 787
AvaI CYCGRG 2 cut(s) 771, 817
AvaII GGWCC 5 cut(s) 82, 214, 224, 469, 696
BaeGI GKGCMC 1 cut(s) 863
BalI TGGCCA 1 cut(s) 464
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 1 cut(s) 863
BbrPI CACGTG 1 cut(s) 703
BbvI GCAGC 6 cut(s) 38, 103, 139, 517, 640, 942
BccI CCATC 3 cut(s) 191, 205, 545
BceAI ACGGC 6 cut(s) 140, 413, 425, 636, 796, 917
BciT130I CCWGG 2 cut(s) 98, 131
BclI TGATCA 1 cut(s) 762
BcnI CCSGG 5 cut(s) 143, 412, 497, 752, 799
BcoDI GTCTC 2 cut(s) 317, 650
BfoI RGCGCY 3 cut(s) 438, 511, 872
BfuAI ACCTGC 1 cut(s) 934
BlpI GCTNAGC 1 cut(s) 804
Bme1390I CCNGG 7 cut(s) 98, 131, 143, 412, 497, 752, 799
Bme18I GGWCC 5 cut(s) 82, 214, 224, 469, 696
BmeT110I CYCGRG 2 cut(s) 771, 817
BmgBI CACGTC 2 cut(s) 460, 760
BmgT120I GGNCC 9 cut(s) 82, 214, 224, 334, 469, 696, 859, 860, 908
BmrFI CCNGG 7 cut(s) 98, 131, 143, 412, 497, 752, 799
BmsI GCATC 3 cut(s) 39, 294, 600
BpmI CTGGAG 3 cut(s) 80, 444, 959
Bpu1102I GCTNAGC 1 cut(s) 804
BpuEI CTTGAG 1 cut(s) 944
BpuMI CCSGG 5 cut(s) 143, 412, 497, 752, 799
BsaAI YACGTR 1 cut(s) 703
BsaHI GRCGYC 5 cut(s) 264, 435, 534, 623, 635
BsaJI CCNNGG 5 cut(s) 97, 129, 465, 798, 864
Bsc4I CCNNNNNNNGG 4 cut(s) 79, 303, 489, 818
Bse118I RCCGGY 1 cut(s) 47
Bse3DI GCAATG 2 cut(s) 42, 279
BseBI CCWGG 2 cut(s) 98, 131
BseDI CCNNGG 5 cut(s) 97, 129, 465, 798, 864
BseGI GGATG 1 cut(s) 183
BseLI CCNNNNNNNGG 4 cut(s) 79, 303, 489, 818
BseMI GCAATG 2 cut(s) 42, 279
BseMII CTCAG 1 cut(s) 795
BseSI GKGCMC 1 cut(s) 863
BseXI GCAGC 6 cut(s) 38, 103, 139, 517, 640, 942
Bsh1236I CGCG 3 cut(s) 177, 582, 719
Bsh1285I CGRYCG 1 cut(s) 663
BshFI GGCC 5 cut(s) 336, 464, 797, 861, 910
BshNI GGYRCC 1 cut(s) 434
BsiEI CGRYCG 1 cut(s) 663
BsiHKCI CYCGRG 2 cut(s) 771, 817
BsiSI CCGG 8 cut(s) 48, 143, 282, 304, 411, 497, 752, 798
BsiWI CGTACG 1 cut(s) 639
BslFI GGGAC 1 cut(s) 709
BslI CCNNNNNNNGG 4 cut(s) 79, 303, 489, 818
BsmAI GTCTC 2 cut(s) 317, 650
BsmBI CGTCTC 1 cut(s) 650
BsmFI GGGAC 1 cut(s) 709
BsmI GAATGC 2 cut(s) 93, 480
BsnI GGCC 5 cut(s) 336, 464, 797, 861, 910
BsoBI CYCGRG 2 cut(s) 771, 817
Bsp120I GGGCCC 1 cut(s) 859
Bsp1286I GDGCHC 1 cut(s) 863
Bsp143I GATC 5 cut(s) 417, 643, 648, 660, 762
Bsp1720I GCTNAGC 1 cut(s) 804
Bsp19I CCATGG 2 cut(s) 465, 864
BspANI GGCC 5 cut(s) 336, 464, 797, 861, 910
BspCNI CTCAG 1 cut(s) 796
BspFNI CGCG 3 cut(s) 177, 582, 719
BspMI ACCTGC 1 cut(s) 934
BspT107I GGYRCC 1 cut(s) 434
BsrBI CCGCTC 2 cut(s) 125, 391
BsrDI GCAATG 2 cut(s) 42, 279
BsrFI RCCGGY 1 cut(s) 47
BssAI RCCGGY 1 cut(s) 47
BssECI CCNNGG 5 cut(s) 97, 129, 465, 798, 864
BssMI GATC 5 cut(s) 417, 643, 648, 660, 762
BssNI GRCGYC 5 cut(s) 264, 435, 534, 623, 635
BssT1I CCWWGG 2 cut(s) 465, 864
Bst2UI CCWGG 2 cut(s) 98, 131
Bst4CI ACNGT 5 cut(s) 235, 605, 790, 847, 919
BstACI GRCGYC 5 cut(s) 264, 435, 534, 623, 635
BstBAI YACGTR 1 cut(s) 703
BstC8I GCNNGC 5 cut(s) 49, 480, 633, 712, 953
BstDEI CTNAG 1 cut(s) 804
BstDSI CCRYGG 2 cut(s) 465, 864
BstENI CCTNNNNNAGG 1 cut(s) 77
BstF5I GGATG 1 cut(s) 183
BstFNI CGCG 3 cut(s) 177, 582, 719
BstH2I RGCGCY 3 cut(s) 438, 511, 872
BstHHI GCGC 6 cut(s) 437, 505, 510, 582, 836, 871
BstKTI GATC 5 cut(s) 420, 646, 651, 663, 765
BstMAI GTCTC 2 cut(s) 317, 650
BstMBI GATC 5 cut(s) 417, 643, 648, 660, 762
BstMCI CGRYCG 1 cut(s) 663
BstMWI GCNNNNNNNGC 8 cut(s) 131, 218, 434, 461, 579, 688, 716, 740
BstNI CCWGG 2 cut(s) 98, 131
BstNSI RCATGY 1 cut(s) 388
BstSCI CCNGG 7 cut(s) 96, 129, 141, 410, 495, 750, 797
BstSLI GKGCMC 1 cut(s) 863
BstUI CGCG 3 cut(s) 177, 582, 719
BstV1I GCAGC 6 cut(s) 38, 103, 139, 517, 640, 942
BsuRI GGCC 5 cut(s) 336, 464, 797, 861, 910
BtgI CCRYGG 2 cut(s) 465, 864
BtgZI GCGATG 2 cut(s) 16, 623
BtrI CACGTC 2 cut(s) 460, 760
BtsCI GGATG 1 cut(s) 183
BtsIMutI CAGTG 1 cut(s) 795
BveI ACCTGC 1 cut(s) 934
Cac8I GCNNGC 5 cut(s) 49, 480, 633, 712, 953
CfoI GCGC 6 cut(s) 437, 505, 510, 582, 836, 871
Cfr10I RCCGGY 1 cut(s) 47
Cfr13I GGNCC 9 cut(s) 82, 214, 224, 334, 469, 696, 859, 860, 908
CpoI CGGWCCG 1 cut(s) 214
CseI GACGC 7 cut(s) 183, 253, 542, 612, 624, 732, 943
Csp6I GTAC 2 cut(s) 640, 814
CspI CGGWCCG 1 cut(s) 214
CviAII CATG 7 cut(s) 298, 331, 385, 466, 547, 784, 865
CviQI GTAC 2 cut(s) 640, 814
DdeI CTNAG 1 cut(s) 804
DinI GGCGCC 1 cut(s) 436
DpnI GATC 5 cut(s) 419, 645, 650, 662, 764
DpnII GATC 5 cut(s) 417, 643, 648, 660, 762
DrdI GACNNNNNNGTC 1 cut(s) 539
DseDI GACNNNNNNGTC 1 cut(s) 539
EaeI YGGCCR 1 cut(s) 462
EciI GGCGGA 1 cut(s) 128
Eco130I CCWWGG 2 cut(s) 465, 864
Eco24I GRGCYC 1 cut(s) 863
Eco47I GGWCC 5 cut(s) 82, 214, 224, 469, 696
Eco57I CTGAAG 1 cut(s) 371
Eco72I CACGTG 1 cut(s) 703
Eco88I CYCGRG 2 cut(s) 771, 817
EcoNI CCTNNNNNAGG 1 cut(s) 77
EcoO109I RGGNCCY 5 cut(s) 224, 696, 859, 860, 908
EcoRII CCWGG 2 cut(s) 96, 129
EcoT14I CCWWGG 2 cut(s) 465, 864
EcoT38I GRGCYC 1 cut(s) 863
EgeI GGCGCC 1 cut(s) 436
EheI GGCGCC 1 cut(s) 436
ErhI CCWWGG 2 cut(s) 465, 864
Esp3I CGTCTC 1 cut(s) 650
FaeI CATG 7 cut(s) 301, 334, 388, 469, 550, 787, 868
FaqI GGGAC 1 cut(s) 709
FatI CATG 7 cut(s) 297, 330, 384, 465, 546, 783, 864
FauI CCCGC 5 cut(s) 130, 214, 335, 575, 715
FbaI TGATCA 1 cut(s) 762
FokI GGATG 1 cut(s) 170
FriOI GRGCYC 1 cut(s) 863
GlaI GCGC 6 cut(s) 436, 504, 509, 581, 835, 870
GsuI CTGGAG 3 cut(s) 80, 444, 959
HaeII RGCGCY 3 cut(s) 438, 511, 872
HaeIII GGCC 5 cut(s) 336, 464, 797, 861, 910
HapII CCGG 8 cut(s) 48, 143, 282, 304, 411, 497, 752, 798
HgaI GACGC 7 cut(s) 183, 253, 542, 612, 624, 732, 943
HhaI GCGC 6 cut(s) 437, 505, 510, 582, 836, 871
Hin1I GRCGYC 5 cut(s) 264, 435, 534, 623, 635
Hin1II CATG 7 cut(s) 301, 334, 388, 469, 550, 787, 868
Hin6I GCGC 6 cut(s) 435, 503, 508, 580, 834, 869
HinP1I GCGC 6 cut(s) 435, 503, 508, 580, 834, 869
HinfI GANTC 2 cut(s) 241, 769
HpaII CCGG 8 cut(s) 48, 143, 282, 304, 411, 497, 752, 798
HphI GGTGA 4 cut(s) 192, 223, 577, 787
Hpy166II GTNNAC 3 cut(s) 532, 667, 757
Hpy188I TCNGA 7 cut(s) 86, 351, 380, 473, 648, 856, 971
Hpy188III TCNNGA 3 cut(s) 68, 238, 766
Hpy8I GTNNAC 3 cut(s) 532, 667, 757
HpyAV CCTTC 3 cut(s) 17, 254, 554
HpyCH4III ACNGT 5 cut(s) 235, 605, 790, 847, 919
HpyCH4IV ACGT 3 cut(s) 459, 702, 759
HpyCH4V TGCA 3 cut(s) 91, 478, 682
HpyF10VI GCNNNNNNNGC 8 cut(s) 131, 218, 434, 461, 579, 688, 716, 740
HpyF3I CTNAG 1 cut(s) 804
HpySE526I ACGT 3 cut(s) 459, 702, 759
Hsp92I GRCGYC 5 cut(s) 264, 435, 534, 623, 635
Hsp92II CATG 7 cut(s) 301, 334, 388, 469, 550, 787, 868
HspAI GCGC 6 cut(s) 435, 503, 508, 580, 834, 869
KasI GGCGCC 1 cut(s) 434
KflI GGGWCCC 1 cut(s) 696
KroI GCCGGC 1 cut(s) 47
KroNI GCCGGC 1 cut(s) 49
Ksp22I TGATCA 1 cut(s) 762
Kzo9I GATC 5 cut(s) 417, 643, 648, 660, 762
LmnI GCTCC 9 cut(s) 59, 99, 130, 185, 306, 396, 425, 498, 940
Lsp1109I GCAGC 6 cut(s) 38, 103, 139, 517, 640, 942
LweI GCATC 3 cut(s) 39, 294, 600
MaeII ACGT 3 cut(s) 459, 702, 759
MaeIII GTNAC 4 cut(s) 565, 616, 703, 931
MalI GATC 5 cut(s) 419, 645, 650, 662, 764
MbiI CCGCTC 2 cut(s) 125, 391
MboI GATC 5 cut(s) 417, 643, 648, 660, 762
MhlI GDGCHC 1 cut(s) 863
MlsI TGGCCA 1 cut(s) 464
MluCI AATT 1 cut(s) 249
MluNI TGGCCA 1 cut(s) 464
Mly113I GGCGCC 1 cut(s) 435
MlyI GAGTC 1 cut(s) 763
MmeI TCCRAC 2 cut(s) 424, 807
Mox20I TGGCCA 1 cut(s) 464
MroNI GCCGGC 1 cut(s) 47
MscI TGGCCA 1 cut(s) 464
MslI CAYNNNNRTG 1 cut(s) 788
Msp20I TGGCCA 1 cut(s) 464
MspA1I CMGCKG 1 cut(s) 631
MspI CCGG 8 cut(s) 48, 143, 282, 304, 411, 497, 752, 798
MspR9I CCNGG 7 cut(s) 98, 131, 143, 412, 497, 752, 799
MteI GCGCNGCGC 1 cut(s) 506
Mva1269I GAATGC 2 cut(s) 93, 480
MvaI CCWGG 2 cut(s) 98, 131
MvnI CGCG 3 cut(s) 177, 582, 719
MwoI GCNNNNNNNGC 8 cut(s) 131, 218, 434, 461, 579, 688, 716, 740
NaeI GCCGGC 1 cut(s) 49
NarI GGCGCC 1 cut(s) 435
NciI CCSGG 5 cut(s) 143, 412, 497, 752, 799
NcoI CCATGG 2 cut(s) 465, 864
NdeII GATC 5 cut(s) 417, 643, 648, 660, 762
NgoMIV GCCGGC 1 cut(s) 47
NlaIII CATG 7 cut(s) 301, 334, 388, 469, 550, 787, 868
NmuCI GTSAC 4 cut(s) 565, 616, 703, 931
NspI RCATGY 1 cut(s) 388
PcsI WCGNNNNNNNCGW 4 cut(s) 426, 438, 593, 632
PctI GAATGC 2 cut(s) 93, 480
PdiI GCCGGC 1 cut(s) 49
PfeI GAWTC 1 cut(s) 241
Pfl23II CGTACG 1 cut(s) 639
PflFI GACNNNGTC 1 cut(s) 74
Ple19I CGATCG 1 cut(s) 663
PleI GAGTC 1 cut(s) 763
PluTI GGCGCC 1 cut(s) 438
PmaCI CACGTG 1 cut(s) 703
PmlI CACGTG 1 cut(s) 703
PpsI GAGTC 1 cut(s) 763
Ppu21I YACGTR 1 cut(s) 703
PpuMI RGGWCCY 2 cut(s) 224, 696
PsiI TTATAA 1 cut(s) 876
Psp5II RGGWCCY 2 cut(s) 224, 696
Psp6I CCWGG 2 cut(s) 96, 129
PspCI CACGTG 1 cut(s) 703
PspGI CCWGG 2 cut(s) 96, 129
PspLI CGTACG 1 cut(s) 639
PspOMI GGGCCC 1 cut(s) 859
PspPI GGNCC 9 cut(s) 82, 214, 224, 334, 469, 696, 859, 860, 908
PspPPI RGGWCCY 2 cut(s) 224, 696
PsyI GACNNNGTC 1 cut(s) 74
PvuI CGATCG 1 cut(s) 663
PvuII CAGCTG 1 cut(s) 631
RsaI GTAC 2 cut(s) 641, 815
RsaNI GTAC 2 cut(s) 640, 814
RseI CAYNNNNRTG 1 cut(s) 788
Rsr2I CGGWCCG 1 cut(s) 214
RsrII CGGWCCG 1 cut(s) 214
Sau3AI GATC 5 cut(s) 417, 643, 648, 660, 762
Sau96I GGNCC 9 cut(s) 82, 214, 224, 334, 469, 696, 859, 860, 908
SchI GAGTC 1 cut(s) 763
ScrFI CCNGG 7 cut(s) 98, 131, 143, 412, 497, 752, 799
SduI GDGCHC 1 cut(s) 863
SfaNI GCATC 3 cut(s) 39, 294, 600
SfoI GGCGCC 1 cut(s) 436
SinI GGWCC 5 cut(s) 82, 214, 224, 469, 696
SmiMI CAYNNNNRTG 1 cut(s) 788
SmlI CTYRAG 1 cut(s) 959
SmoI CTYRAG 1 cut(s) 959
Sse9I AATT 1 cut(s) 249
SspDI GGCGCC 1 cut(s) 434
StyD4I CCNGG 7 cut(s) 96, 129, 141, 410, 495, 750, 797
StyI CCWWGG 2 cut(s) 465, 864
TaaI ACNGT 5 cut(s) 235, 605, 790, 847, 919
TaiI ACGT 3 cut(s) 462, 705, 762
TaqI TCGA 2 cut(s) 21, 746
TasI AATT 1 cut(s) 249
TfiI GAWTC 1 cut(s) 241
TscAI CASTG 1 cut(s) 795
TseFI GTSAC 4 cut(s) 565, 616, 703, 931
TseI GCWGC 6 cut(s) 51, 91, 152, 505, 628, 955
Tsp45I GTSAC 4 cut(s) 565, 616, 703, 931
TspDTI ATGAA 1 cut(s) 794
TspGWI ACGGA 1 cut(s) 206
TspRI CASTG 1 cut(s) 795
Tth111I GACNNNGTC 1 cut(s) 74
VpaK11BI GGWCC 5 cut(s) 82, 214, 224, 469, 696
XagI CCTNNNNNAGG 1 cut(s) 77
XceI RCATGY 1 cut(s) 388
XcmI CCANNNNNNNNNTGG 2 cut(s) 328, 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.