Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0014993

Physical Location & Seq

Genomic Coordinates Forward (+)

16109208 .. 16114307

Gene Structure 5100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0175200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGAGAGAAATCAATCACAGAGAGAGAGACAAAGCAGTGCAAAAAAAAAAAGGGTTAGGGGTTTCTGGAATCGGAGAAGAAACGATGTGGCACGAAGCGAGGAGGTCGGAGAGGAAAGTCCACGACATGATGGACGCCGCTCGCAAACGAGCTCAACGACGTGCCGTTTTCCTCGCCAAACGCCGCGGCGATCCCCAGCAGTCCATCCAGGTCGTCGGCTCCCGCTGCCGCCTCTACCGCGACGACGGCCTTTACCAAGCCACCGAGGACCAGCAAGGCCTGATTCCTTGGAATGGAAAACAGGATGTGTTAATTGACAGATTTGATGGGCGCGCGCTTCTCGATTTTATTCGAGAGTCTAAGCATTTTCGTGTTCAAGAGAAGTCGGAAGAGGAGGAAGAGTTAGAAGAGTTTGTTAATTTTGAGCGTTATCGGGATTTAATTAAGCATCGTCGTAGAGGATTTACTGATGATGAGGGTTTGCTACACGTGAATCAAGAGATGGAGGCCAAGGTTACTGCTCCATTTGCACCTGAGAGGTCTCAGCCGCAACAAGCTTCTGCCACCAAGGGTTCTTATTCCCAAGTTGGGTTCTCTTATGGTGGGGATGGAAAAGAGGACGCCCAGTATTCAGATGCTGATGAAGACGATGAGGATGATGACGATGACGAAGATGAGGATGATTTCAACTCTGATGATAGCAGTGATGAAGGAATGGATAAAATAGCAAAAGAATTTGGAATCAAGAGGTATGGTTGGCTTGTCTACATGGATAAGAAAGCCAAGGAGGAGGAGAAAAGGCAAAAGGAAGTGATCAAAGGCGATCCGGCAATTAGGAAGATGAGTCGCAAGGAAAGAAGGAAGGTTTCTCAGATAGAAAGGGAGAGAGAAAGAGAAACTGCCCGGGTAACCGGAACTCGTGTTCTCCAACATGATCCATACCGTGAAAGCAGGCGAAGTCCAACATATGAAGCTTATCCTCGTTCAAGAAGATCAAGATCTCGATCACCATCATACTCAAGGCGTCATCCTCATGGACGACATTCTGATGCTCATAGAAGCAAACCAACGACTTCTAAAATAGAATACATTACAGAATTTGGGGGCTCAGGCGATAAGGAAGAATCAAAGCGTGAAGGGTTTTCTCCACCACAATCTCCTCGCTCACAGACTGATGTGTTAAACCGGTCTTCAACTGGTGTAATACTTGAGGCTCTGCATGTCGATCCTGCATCCGGTGCATTGCTTGACAAGGATAAGAGCACTAAAGTGGTGAAGCCATCAGCAAGCACATCTTCAGCATTAGCAAAGTTAAGTAAGACAAGTACTTCTGTGGGGTCACTGAAGCAGCAACCAGCAGAGAAGAAAGAAACTCCTCAAGAAAGACTTAAAAGGATTATGAGCAAGCAGCTGAACAAACAGATTAAGAAAGATACTGCCGCTGAAATGGCTAAAAAGCGAGAGCAGGAGCGCCAGAGGCTGGAAAAACTTGCCGAAACAAGCCGGTTAAGTCGATCTAGGTGCCATAGTCGTAGCAGGAGCTACAGCCGTTCTCCACCAAGAAGACACCGACGCAGTAGAAGTCCAAGTCGAAGCAGGAGTTCCCGACGACATTACTCCCGTTCTAGGTCAAGGTCCCGCTCCCGGTCTCGTTCTCACTCCAGGTCTCGCTCCCGTACCCGTACTCGCTCACGCACATACTCCCGCTCACCAAGGGTAACAAGCCGTTCAAGATACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006812 GO:0006817 GO:0006820 GO:0006835 GO:0006839 GO:0006855 GO:0008150 GO:0008272 GO:0008509 GO:0008514 GO:0015075 GO:0015103 GO:0015116 GO:0015117 GO:0015131 GO:0015140 GO:0015141 GO:0015238 GO:0015291 GO:0015297 GO:0015318 GO:0015556 GO:0015672 GO:0015698 GO:0015709 GO:0015711 GO:0015729 GO:0015740 GO:0015743 GO:0015744 GO:0015849 GO:0015893 GO:0016020 GO:0016021 GO:0017077 GO:0019866 GO:0022804 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0035435 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071422 GO:0071423 GO:0071702 GO:0072348 GO:0098655 GO:0098656 GO:0098660 GO:0098661 GO:0098662 GO:1901682 GO:1902356 GO:1902358 GO:1902600 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

579

Amino Acids

67.36

Weight (kDa)

10.08

Isoelectric Point (pI)

87.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DRY_EERY	PF09750	69 - 202	1.4e-40	Alternative splicing regulator

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014993)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22500
fragaria_vesca	FvH4_1g19840
malus_domestica	MD01G1038000.v1.1 MD15G1315000.v1.1
prunus_persica	Prupe.6G196900_v2.0.a1
pyrus_communis	pycom01g06600 pycom15g27820
rosa_chinensis	RchiOBHm_Chr2g0111661
rosa_laevigata	RLG00000017915
rosa_multiflora	Rmu_sc0034146.1_g000001
rosa_rugosa	Rorug02G0175200
rosa_samantha	Rh2AG228200 Rh2BG240400 Rh2CG231600 Rh2DG236200
rosa_wichuraiana	Rw2G017610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1521
AccB7I	CCANNNNNTGG	1 cut(s)	1480
AccBSI	CCGCTC	3 cut(s)	140, 1641, 1707
AccI	GTMKAC	1 cut(s)	765
AccII	CGCG	4 cut(s)	186, 240, 333, 335
AclWI	GGATC	4 cut(s)	185, 818, 929, 1220
AcsI	RAATTY	2 cut(s)	734, 1097
AcuI	CTGAAG	2 cut(s)	1281, 1364
AcvI	CACGTG	1 cut(s)	490
AcyI	GRCGYC	3 cut(s)	135, 621, 1024
AfaI	GTAC	3 cut(s)	1327, 1678, 1684
AfiI	CCNNNNNNNGG	6 cut(s)	293, 588, 1235, 1480, 1626, 1644
AflIII	ACRYGT	1 cut(s)	487
AgeI	ACCGGT	1 cut(s)	1185
AgsI	TTSAA	5 cut(s)	377, 688, 987, 1194, 1731
AjiI	CACGTC	1 cut(s)	161
AjnI	CCWGG	2 cut(s)	207, 1661
AleI	CACNNNNGTG	1 cut(s)	1268
AloI	GAACNNNNNNTCC	2 cut(s)	906, 938
AluBI	AGCT	5 cut(s)	152, 557, 974, 1411, 1542
AluI	AGCT	5 cut(s)	152, 557, 974, 1411, 1542
Alw21I	GWGCWC	2 cut(s)	154, 1265
Alw26I	GTCTC	4 cut(s)	21, 546, 1653, 1671
AlwI	GGATC	4 cut(s)	185, 818, 929, 1220
AlwNI	CAGNNNCTG	2 cut(s)	638, 1480
Ama87I	CYCGRG	1 cut(s)	903
AoxI	GGCC	3 cut(s)	247, 277, 507
ApeKI	GCWGC	3 cut(s)	225, 1348, 1408
ApoI	RAATTY	2 cut(s)	734, 1097
AsiGI	ACCGGT	1 cut(s)	1185
AspLEI	GCGC	4 cut(s)	333, 335, 337, 1473
AspS9I	GGNCC	2 cut(s)	268, 1635
AsuC2I	CCSGG	3 cut(s)	904, 905, 1645
AsuHPI	GGTGA	3 cut(s)	999, 1285, 1701
AvaI	CYCGRG	1 cut(s)	903
AvaII	GGWCC	2 cut(s)	268, 1635
BanI	GGYRCC	1 cut(s)	1521
BanII	GRGCYC	2 cut(s)	154, 1109
BauI	CACGAG	1 cut(s)	918
BbrPI	CACGTG	1 cut(s)	490
BbsI	GAAGAC	3 cut(s)	651, 1182, 1570
Bbv12I	GWGCWC	2 cut(s)	154, 1265
BbvI	GCAGC	3 cut(s)	212, 1360, 1420
BccI	CCATC	7 cut(s)	124, 212, 320, 496, 602, 1018, 1288
BceAI	ACGGC	4 cut(s)	149, 262, 1533, 1710
BcgI	CGANNNNNNTGC	2 cut(s)	1503, 1537
BciT130I	CCWGG	2 cut(s)	209, 1663
BclI	TGATCA	1 cut(s)	813
BcnI	CCSGG	3 cut(s)	904, 905, 1645
BcoDI	GTCTC	4 cut(s)	21, 546, 1653, 1671
BfaI	CTAG	2 cut(s)	1518, 1626
BfmI	CTRYAG	1 cut(s)	1543
BfoI	RGCGCY	1 cut(s)	1474
BglII	AGATCT	1 cut(s)	998
BisI	GCNGC	9 cut(s)	138, 184, 187, 226, 229, 548, 1349, 1409, 1440
BlsI	GCNGC	9 cut(s)	139, 185, 188, 227, 230, 549, 1350, 1410, 1441
BmcAI	AGTACT	1 cut(s)	1327
Bme1390I	CCNGG	5 cut(s)	209, 904, 905, 1645, 1663
Bme18I	GGWCC	2 cut(s)	268, 1635
BmeT110I	CYCGRG	1 cut(s)	903
BmgBI	CACGTC	1 cut(s)	161
BmgT120I	GGNCC	2 cut(s)	268, 1635
BmiI	GGNNCC	3 cut(s)	220, 1523, 1637
BmrFI	CCNGG	5 cut(s)	209, 904, 905, 1645, 1663
BmrI	ACTGGG	1 cut(s)	619
BmsI	GCATC	4 cut(s)	457, 625, 1039, 1241
BmuI	ACTGGG	1 cut(s)	619
BpiI	GAAGAC	3 cut(s)	651, 1182, 1570
BpmI	CTGGAG	1 cut(s)	1645
Bpu10I	CCTNAGC	1 cut(s)	1108
BpuEI	CTTGAG	3 cut(s)	1003, 1229, 1362
BpuMI	CCSGG	3 cut(s)	904, 905, 1645
BsaAI	YACGTR	1 cut(s)	490
BsaBI	GATNNNNATC	3 cut(s)	997, 1003, 1009
BsaHI	GRCGYC	3 cut(s)	135, 621, 1024
BsaI	GGTCTC	3 cut(s)	546, 1653, 1671
BsaJI	CCNNGG	8 cut(s)	184, 264, 287, 510, 567, 783, 903, 1712
BsaWI	WCCGGW	3 cut(s)	911, 1185, 1235
BsaXI	ACNNNNNCTCC	2 cut(s)	386, 416
Bsc4I	CCNNNNNNNGG	6 cut(s)	293, 588, 1235, 1480, 1626, 1644
Bse118I	RCCGGY	2 cut(s)	1185, 1503
Bse1I	ACTGG	2 cut(s)	625, 1201
Bse3DI	GCAATG	1 cut(s)	1241
Bse8I	GATNNNNATC	3 cut(s)	997, 1003, 1009
BseBI	CCWGG	2 cut(s)	209, 1663
BseDI	CCNNGG	8 cut(s)	184, 264, 287, 510, 567, 783, 903, 1712
BseGI	GGATG	7 cut(s)	204, 310, 613, 661, 685, 1027, 1232
BseJI	GATNNNNATC	3 cut(s)	997, 1003, 1009
BseLI	CCNNNNNNNGG	6 cut(s)	293, 588, 1235, 1480, 1626, 1644
BseMI	GCAATG	1 cut(s)	1241
BseMII	CTCAG	4 cut(s)	525, 557, 884, 1122
BseNI	ACTGG	2 cut(s)	625, 1201
BsePI	GCGCGC	2 cut(s)	331, 333
BseRI	GAGGAG	6 cut(s)	115, 407, 803, 806, 1149, 1365
BseXI	GCAGC	3 cut(s)	212, 1360, 1420
BseYI	CCCAGC	1 cut(s)	195
Bsh1236I	CGCG	4 cut(s)	186, 240, 333, 335
BshFI	GGCC	3 cut(s)	249, 279, 509
BshNI	GGYRCC	1 cut(s)	1521
BshTI	ACCGGT	1 cut(s)	1185
BsiHKAI	GWGCWC	2 cut(s)	154, 1265
BsiHKCI	CYCGRG	1 cut(s)	903
BsiSI	CCGG	7 cut(s)	827, 904, 912, 1186, 1236, 1504, 1645
BslFI	GGGAC	1 cut(s)	1621
BslI	CCNNNNNNNGG	6 cut(s)	293, 588, 1235, 1480, 1626, 1644
BsmAI	GTCTC	4 cut(s)	21, 546, 1653, 1671
BsmFI	GGGAC	1 cut(s)	1621
BsnI	GGCC	3 cut(s)	249, 279, 509
Bso31I	GGTCTC	3 cut(s)	546, 1653, 1671
BsoBI	CYCGRG	1 cut(s)	903
Bsp1286I	GDGCHC	3 cut(s)	154, 1109, 1265
Bsp143I	GATC	9 cut(s)	190, 813, 823, 934, 992, 998, 1004, 1225, 1514
BspANI	GGCC	3 cut(s)	249, 279, 509
BspCNI	CTCAG	4 cut(s)	526, 556, 883, 1121
BspFNI	CGCG	4 cut(s)	186, 240, 333, 335
BspLI	GGNNCC	3 cut(s)	220, 1523, 1637
BspPI	GGATC	4 cut(s)	185, 818, 929, 1220
BspT107I	GGYRCC	1 cut(s)	1521
BspTNI	GGTCTC	3 cut(s)	546, 1653, 1671
BsrBI	CCGCTC	3 cut(s)	140, 1641, 1707
BsrDI	GCAATG	1 cut(s)	1241
BsrFI	RCCGGY	2 cut(s)	1185, 1503
BsrI	ACTGG	2 cut(s)	625, 1201
BssAI	RCCGGY	2 cut(s)	1185, 1503
BssECI	CCNNGG	8 cut(s)	184, 264, 287, 510, 567, 783, 903, 1712
BssHII	GCGCGC	2 cut(s)	331, 333
BssMI	GATC	9 cut(s)	190, 813, 823, 934, 992, 998, 1004, 1225, 1514
BssNI	GRCGYC	3 cut(s)	135, 621, 1024
BssSI	CACGAG	1 cut(s)	918
BssT1I	CCWWGG	5 cut(s)	287, 510, 567, 783, 1712
Bst2BI	CACGAG	1 cut(s)	918
Bst2UI	CCWGG	2 cut(s)	209, 1663
Bst4CI	ACNGT	1 cut(s)	944
Bst6I	CTCTTC	3 cut(s)	384, 393, 402
BstACI	GRCGYC	3 cut(s)	135, 621, 1024
BstAPI	GCANNNNNTGC	1 cut(s)	1238
BstBAI	YACGTR	1 cut(s)	490
BstC8I	GCNNGC	6 cut(s)	142, 333, 335, 953, 1288, 1406
BstDEI	CTNAG	5 cut(s)	360, 534, 543, 870, 1108
BstDSI	CCRYGG	1 cut(s)	184
BstEII	GGTNACC	1 cut(s)	907
BstF5I	GGATG	7 cut(s)	204, 310, 613, 661, 685, 1027, 1232
BstFNI	CGCG	4 cut(s)	186, 240, 333, 335
BstH2I	RGCGCY	1 cut(s)	1474
BstHHI	GCGC	4 cut(s)	333, 335, 337, 1473
BstKTI	GATC	9 cut(s)	193, 816, 826, 937, 995, 1001, 1007, 1228, 1517
BstMAI	GTCTC	4 cut(s)	21, 546, 1653, 1671
BstMBI	GATC	9 cut(s)	190, 813, 823, 934, 992, 998, 1004, 1225, 1514
BstMWI	GCNNNNNNNGC	7 cut(s)	225, 237, 246, 527, 1238, 1448, 1477
BstNI	CCWGG	2 cut(s)	209, 1663
BstNSI	RCATGY	1 cut(s)	1223
BstPI	GGTNACC	1 cut(s)	907
BstSCI	CCNGG	5 cut(s)	207, 902, 903, 1643, 1661
BstSFI	CTRYAG	1 cut(s)	1543
BstUI	CGCG	4 cut(s)	186, 240, 333, 335
BstV1I	GCAGC	3 cut(s)	212, 1360, 1420
BstV2I	GAAGAC	3 cut(s)	651, 1182, 1570
BstX2I	RGATCY	1 cut(s)	998
BstYI	RGATCY	1 cut(s)	998
BsuRI	GGCC	3 cut(s)	249, 279, 509
BtgI	CCRYGG	1 cut(s)	184
BtrI	CACGTC	1 cut(s)	161
BtsCI	GGATG	7 cut(s)	204, 310, 613, 661, 685, 1027, 1232
BtsI	GCAGTG	2 cut(s)	42, 709
BtsIMutI	CAGTG	3 cut(s)	42, 709, 1340
Cac8I	GCNNGC	6 cut(s)	142, 333, 335, 953, 1288, 1406
CaiI	CAGNNNCTG	2 cut(s)	638, 1480
CfoI	GCGC	4 cut(s)	333, 335, 337, 1473
Cfr10I	RCCGGY	2 cut(s)	1185, 1503
Cfr13I	GGNCC	2 cut(s)	268, 1635
Cfr42I	CCGCGG	1 cut(s)	187
Cfr9I	CCCGGG	1 cut(s)	903
CseI	GACGC	4 cut(s)	143, 629, 1013, 1581
Csp6I	GTAC	3 cut(s)	1326, 1677, 1683
CspAI	ACCGGT	1 cut(s)	1185
CviAII	CATG	5 cut(s)	127, 769, 932, 1034, 1220
CviQI	GTAC	3 cut(s)	1326, 1677, 1683
DdeI	CTNAG	5 cut(s)	360, 534, 543, 870, 1108
DpnI	GATC	9 cut(s)	192, 815, 825, 936, 994, 1000, 1006, 1227, 1516
DpnII	GATC	9 cut(s)	190, 813, 823, 934, 992, 998, 1004, 1225, 1514
Eam1104I	CTCTTC	3 cut(s)	384, 393, 402
EarI	CTCTTC	3 cut(s)	384, 393, 402
Ecl136II	GAGCTC	1 cut(s)	152
Eco130I	CCWWGG	5 cut(s)	287, 510, 567, 783, 1712
Eco147I	AGGCCT	1 cut(s)	279
Eco24I	GRGCYC	2 cut(s)	154, 1109
Eco31I	GGTCTC	3 cut(s)	546, 1653, 1671
Eco47I	GGWCC	2 cut(s)	268, 1635
Eco53kI	GAGCTC	1 cut(s)	152
Eco57I	CTGAAG	2 cut(s)	1281, 1364
Eco72I	CACGTG	1 cut(s)	490
Eco88I	CYCGRG	1 cut(s)	903
Eco91I	GGTNACC	1 cut(s)	907
EcoICRI	GAGCTC	1 cut(s)	152
EcoO109I	RGGNCCY	1 cut(s)	1635
EcoO65I	GGTNACC	1 cut(s)	907
EcoRII	CCWGG	2 cut(s)	207, 1661
EcoT14I	CCWWGG	5 cut(s)	287, 510, 567, 783, 1712
EcoT38I	GRGCYC	2 cut(s)	154, 1109
ErhI	CCWWGG	5 cut(s)	287, 510, 567, 783, 1712
FaeI	CATG	5 cut(s)	130, 772, 935, 1037, 1223
FalI	AAGNNNNNCTT	4 cut(s)	1279, 1311, 1371, 1403
FaqI	GGGAC	1 cut(s)	1621
FatI	CATG	5 cut(s)	126, 768, 931, 1033, 1219
FauI	CCCGC	3 cut(s)	230, 1646, 1712
FauNDI	CATATG	1 cut(s)	967
FbaI	TGATCA	1 cut(s)	813
FblI	GTMKAC	1 cut(s)	765
Fnu4HI	GCNGC	9 cut(s)	138, 184, 187, 226, 229, 548, 1349, 1409, 1440
FokI	GGATG	7 cut(s)	191, 317, 620, 668, 692, 1014, 1219
FriOI	GRGCYC	2 cut(s)	154, 1109
Fsp4HI	GCNGC	9 cut(s)	138, 184, 187, 226, 229, 548, 1349, 1409, 1440
FspBI	CTAG	2 cut(s)	1518, 1626
GlaI	GCGC	4 cut(s)	332, 334, 336, 1472
GluI	GCNGC	9 cut(s)	138, 184, 187, 226, 229, 548, 1349, 1409, 1440
GsaI	CCCAGC	1 cut(s)	199
GsuI	CTGGAG	1 cut(s)	1645
HaeII	RGCGCY	1 cut(s)	1474
HaeIII	GGCC	3 cut(s)	249, 279, 509
HapII	CCGG	7 cut(s)	827, 904, 912, 1186, 1236, 1504, 1645
HgaI	GACGC	4 cut(s)	143, 629, 1013, 1581
HhaI	GCGC	4 cut(s)	333, 335, 337, 1473
Hin1I	GRCGYC	3 cut(s)	135, 621, 1024
Hin1II	CATG	5 cut(s)	130, 772, 935, 1037, 1223
Hin6I	GCGC	4 cut(s)	331, 333, 335, 1471
HinP1I	GCGC	4 cut(s)	331, 333, 335, 1471
HindIII	AAGCTT	2 cut(s)	555, 972
HinfI	GANTC	7 cut(s)	69, 283, 356, 493, 741, 844, 1124
HpaII	CCGG	7 cut(s)	827, 904, 912, 1186, 1236, 1504, 1645
HphI	GGTGA	3 cut(s)	999, 1285, 1701
Hpy166II	GTNNAC	2 cut(s)	121, 766
Hpy188I	TCNGA	7 cut(s)	74, 109, 388, 634, 694, 873, 1048
Hpy8I	GTNNAC	2 cut(s)	121, 766
Hpy99I	CGWCG	7 cut(s)	162, 218, 245, 248, 456, 1575, 1611
HpyAV	CCTTC	4 cut(s)	704, 852, 856, 1130
HpyCH4III	ACNGT	1 cut(s)	944
HpyCH4IV	ACGT	2 cut(s)	160, 489
HpyCH4V	TGCA	5 cut(s)	40, 530, 1219, 1232, 1241
HpyF10VI	GCNNNNNNNGC	7 cut(s)	225, 237, 246, 527, 1238, 1448, 1477
HpyF3I	CTNAG	5 cut(s)	360, 534, 543, 870, 1108
HpySE526I	ACGT	2 cut(s)	160, 489
Hsp92I	GRCGYC	3 cut(s)	135, 621, 1024
Hsp92II	CATG	5 cut(s)	130, 772, 935, 1037, 1223
HspAI	GCGC	4 cut(s)	331, 333, 335, 1471
Ksp22I	TGATCA	1 cut(s)	813
KspI	CCGCGG	1 cut(s)	187
Kzo9I	GATC	9 cut(s)	190, 813, 823, 934, 992, 998, 1004, 1225, 1514
LmnI	GCTCC	6 cut(s)	224, 526, 1468, 1539, 1646, 1676
Lsp1109I	GCAGC	3 cut(s)	212, 1360, 1420
LweI	GCATC	4 cut(s)	457, 625, 1039, 1241
MaeI	CTAG	2 cut(s)	1518, 1626
MaeII	ACGT	2 cut(s)	160, 489
MaeIII	GTNAC	4 cut(s)	514, 907, 1338, 1717
MalI	GATC	9 cut(s)	192, 815, 825, 936, 994, 1000, 1006, 1227, 1516
MbiI	CCGCTC	3 cut(s)	140, 1641, 1707
MboI	GATC	9 cut(s)	190, 813, 823, 934, 992, 998, 1004, 1225, 1514
MflI	RGATCY	1 cut(s)	998
MhlI	GDGCHC	3 cut(s)	154, 1109, 1265
MluCI	AATT	6 cut(s)	312, 418, 441, 734, 831, 1097
MlyI	GAGTC	2 cut(s)	365, 853
MmeI	TCCRAC	4 cut(s)	87, 366, 952, 986
MseI	TTAA	9 cut(s)	311, 417, 440, 444, 1181, 1313, 1389, 1425, 1508
MslI	CAYNNNNRTG	4 cut(s)	369, 1032, 1047, 1268
MspA1I	CMGCKG	4 cut(s)	186, 225, 1411, 1442
MspI	CCGG	7 cut(s)	827, 904, 912, 1186, 1236, 1504, 1645
MspR9I	CCNGG	5 cut(s)	209, 904, 905, 1645, 1663
MvaI	CCWGG	2 cut(s)	209, 1663
MvnI	CGCG	4 cut(s)	186, 240, 333, 335
MwoI	GCNNNNNNNGC	7 cut(s)	225, 237, 246, 527, 1238, 1448, 1477
NciI	CCSGG	3 cut(s)	904, 905, 1645
NdeI	CATATG	1 cut(s)	967
NdeII	GATC	9 cut(s)	190, 813, 823, 934, 992, 998, 1004, 1225, 1514
NlaIII	CATG	5 cut(s)	130, 772, 935, 1037, 1223
NlaIV	GGNNCC	3 cut(s)	220, 1523, 1637
NmuCI	GTSAC	1 cut(s)	1338
NspI	RCATGY	1 cut(s)	1223
OliI	CACNNNNGTG	1 cut(s)	1268
PacI	TTAATTAA	1 cut(s)	444
PauI	GCGCGC	2 cut(s)	331, 333
PceI	AGGCCT	1 cut(s)	279
PcsI	WCGNNNNNNNCGW	1 cut(s)	154
PfeI	GAWTC	5 cut(s)	69, 283, 493, 741, 1124
PflMI	CCANNNNNTGG	1 cut(s)	1480
PinAI	ACCGGT	1 cut(s)	1185
PkrI	GCNGC	9 cut(s)	139, 185, 188, 227, 230, 549, 1350, 1410, 1441
PleI	GAGTC	2 cut(s)	364, 852
PmaCI	CACGTG	1 cut(s)	490
PmlI	CACGTG	1 cut(s)	490
PpsI	GAGTC	2 cut(s)	364, 852
Ppu21I	YACGTR	1 cut(s)	490
PpuMI	RGGWCCY	1 cut(s)	1635
Psp124BI	GAGCTC	1 cut(s)	154
Psp5II	RGGWCCY	1 cut(s)	1635
Psp6I	CCWGG	2 cut(s)	207, 1661
PspCI	CACGTG	1 cut(s)	490
PspEI	GGTNACC	1 cut(s)	907
PspFI	CCCAGC	1 cut(s)	195
PspGI	CCWGG	2 cut(s)	207, 1661
PspN4I	GGNNCC	3 cut(s)	220, 1523, 1637
PspPI	GGNCC	2 cut(s)	268, 1635
PspPPI	RGGWCCY	1 cut(s)	1635
PstNI	CAGNNNCTG	2 cut(s)	638, 1480
PsuI	RGATCY	1 cut(s)	998
PteI	GCGCGC	2 cut(s)	331, 333
PvuII	CAGCTG	1 cut(s)	1411
RsaI	GTAC	3 cut(s)	1327, 1678, 1684
RsaNI	GTAC	3 cut(s)	1326, 1677, 1683
RseI	CAYNNNNRTG	4 cut(s)	369, 1032, 1047, 1268
SacI	GAGCTC	1 cut(s)	154
SacII	CCGCGG	1 cut(s)	187
SaqAI	TTAA	9 cut(s)	311, 417, 440, 444, 1181, 1313, 1389, 1425, 1508
SatI	GCNGC	9 cut(s)	138, 184, 187, 226, 229, 548, 1349, 1409, 1440
Sau3AI	GATC	9 cut(s)	190, 813, 823, 934, 992, 998, 1004, 1225, 1514
Sau96I	GGNCC	2 cut(s)	268, 1635
ScaI	AGTACT	1 cut(s)	1327
SchI	GAGTC	2 cut(s)	365, 853
ScrFI	CCNGG	5 cut(s)	209, 904, 905, 1645, 1663
SduI	GDGCHC	3 cut(s)	154, 1109, 1265
SfaNI	GCATC	4 cut(s)	457, 625, 1039, 1241
SfcI	CTRYAG	1 cut(s)	1543
Sfr303I	CCGCGG	1 cut(s)	187
SgrBI	CCGCGG	1 cut(s)	187
SinI	GGWCC	2 cut(s)	268, 1635
SmaI	CCCGGG	1 cut(s)	905
SmiMI	CAYNNNNRTG	4 cut(s)	369, 1032, 1047, 1268
SmlI	CTYRAG	3 cut(s)	1018, 1208, 1377
SmoI	CTYRAG	3 cut(s)	1018, 1208, 1377
Sse9I	AATT	6 cut(s)	312, 418, 441, 734, 831, 1097
SseBI	AGGCCT	1 cut(s)	279
SspMI	CTAG	2 cut(s)	1518, 1626
SstI	GAGCTC	1 cut(s)	154
StuI	AGGCCT	1 cut(s)	279
StyD4I	CCNGG	5 cut(s)	207, 902, 903, 1643, 1661
StyI	CCWWGG	5 cut(s)	287, 510, 567, 783, 1712
TaaI	ACNGT	1 cut(s)	944
TaiI	ACGT	2 cut(s)	163, 492
TaqI	TCGA	6 cut(s)	342, 352, 1003, 1224, 1513, 1591
TasI	AATT	6 cut(s)	312, 418, 441, 734, 831, 1097
TatI	WGTACW	1 cut(s)	1325
TauI	GCSGC	6 cut(s)	140, 186, 189, 231, 550, 1442
TfiI	GAWTC	5 cut(s)	69, 283, 493, 741, 1124
Tru1I	TTAA	9 cut(s)	311, 417, 440, 444, 1181, 1313, 1389, 1425, 1508
Tru9I	TTAA	9 cut(s)	311, 417, 440, 444, 1181, 1313, 1389, 1425, 1508
TscAI	CASTG	3 cut(s)	42, 709, 1347
TseFI	GTSAC	1 cut(s)	1338
TseI	GCWGC	3 cut(s)	225, 1348, 1408
Tsp45I	GTSAC	1 cut(s)	1338
TspDTI	ATGAA	3 cut(s)	657, 723, 984
TspMI	CCCGGG	1 cut(s)	903
TspRI	CASTG	3 cut(s)	42, 709, 1347
Van91I	CCANNNNNTGG	1 cut(s)	1480
VpaK11BI	GGWCC	2 cut(s)	268, 1635
XapI	RAATTY	2 cut(s)	734, 1097
XceI	RCATGY	1 cut(s)	1223
XmaI	CCCGGG	1 cut(s)	903
XmiI	GTMKAC	1 cut(s)	765
XspI	CTAG	2 cut(s)	1518, 1626
ZrmI	AGTACT	1 cut(s)	1327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.