MD15G1372600.v1.1

Phospho-2-dehydro-3-deoxyheptonate aldolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0015832
Physical Location & Seq
Forward (+)
45509233 .. 45513385
4153 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1372600.v1.1.491

Sequence Viewer

Length: 1620 bp
ATGGCGCTCACAAGCAGCAGCTCTCTGATTCCCACCAAATCTGCCTTCCTTCAAGGCCAGTCTCTCTTACCCTCTTCCAGAACTCACCAACCCTCTCTGCCCATCAAGTCCGTTCGGCCAATCGTCGCTGTCCATGCCGCAGAGCCAGCCAAGAACCCAGTTGTCTCCGATAAGCCGCCGAAGCAGCAGGCTGCTCAGACGGCGGCTCCTTCTTCTTCGGCGACGAGCCACAATGCGGTTCCGGCGAAATGGAGCGTGGAGACATGGAAATCTAAGAAGGCGTTGCAATTGCCGGAGTACCCGAATCAGGAAGATCTCCAGTCGGTGCTCCGGACCCTCGATTCGTTCCCGCCTATTGTGTTCGCCGGTGAGGCTAGGAGCCTGGAGGAGCGTATCGGAGAGGCTGCTATGGGAAACGCGTTTCTTCTTCAAGGTGGGGACTGCGCTGAGAGTTTCAAGGAGTTCAATGCCAATAACATTCGTGACACCTTCAGAATTCTCCTCCAAATGGGTGTCGTTTTGATGTTCGGAGGCCAAATGCCCGTCGTCAAGGTGGGAAGAATGGCGGGTCAATTTGCGAAACCCAGATCGGATTCTTTCGAGGAGAAGAATGGTGTGAAGCTGCCTAGTTACAGAGGAGACAATGTGAATGGAGACGCCTTTGATTTACAGTCGAGGACTCCAGACCCTCAGAGACTGATCAGAGCCTATTGCCAATCTGCTGCTACTCTAAACCTTCTGAGGGCGTTCGCCACAGGAGGTTACGCAGCCATGCAGAGGGTCACACAGTGGAACTTGGATTTCACAGAGCACAGCGAGCAGGGTGATAGATATCGGGAGCTAGCTGCCCGGGTGGATGAGGCCCTTGGATTCATGACTGCTGCCGGGCTCACAGTTGAACACCCTATCATGACAACCACTGAGTTCTGGACGTCTCATGAGTGCTTGCACTTGCCTTACGAGCAGTCTCTTACTAGGTTGGATTCAACTTCCGGCCTTTACTATGATTGCTCTGCCCATATGCTTTGGGCTGGCGAGCGTACCAGGCAACTGGATGGTGCTCATGTTGAGTTCCTTAGAGGTGTTGCCAATCCCCTTGGAATCAAGGTCAGCGATAAGATGGATCCAAATGAGCTTGTTAAGCTCATTGAAATTTTGAATCCTCAGAATAAAGCTGGGAGGATAACAATCATCACAAGAATGGGAGCTGAGAACATGAGGGTGAAACTTCCTCATCTTATTAGGGCAGTCCGCAGGGCAGGGCAGATTGTCACATGGGTTAGTGACCCAATGCATGGAAACACCATTAAGGCTCCTTGTGGTCTCAAAACACGTCCTTTCGATGCCATAAGGGCTGAGGTGAGAGCGTTCTTTGATGTGCACGAGCAAGAAGGAAGCCATCCAGGCGGTGTTCATCTAGAGATGACAGGCCAGAATGTGACAGAATGCATCGGAGGTTCACGCACTGTGACATTTGACGACCTTGGCTCGCGCTACCACACTCACTGCGACCCAAGGCTCAATGCCTCGCAATCTCTTGAGCTGGCCTTCATCATCGCCGAGCGCCTCAGGAAAAGAAGGATCAAGTCACAGCATTCAGTTGCGGCTTTAGGTCTGTAG

Protein Analysis

540

Amino Acids

59.46

Weight (kDa)

8.72

Isoelectric Point (pI)

46.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAHP_synth_2 PF01474 84 - 520 4.5e-202 Class-II DAHP synthetase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22410
fragaria_vesca FvH4_5g36810
malus_domestica MD08G1186700.v1.1 MD15G1372600.v1.1
prunus_persica Prupe.1G521200_v2.0.a1
pyrus_communis pycom08g16050 pycom15g33360
rosa_chinensis RchiOBHm_Chr7g0243371
rosa_laevigata RLG00000000852
rosa_multiflora Rmu_sc0001036.1_g000028 Rmu_sc0001461.1_g000106
rosa_roxburghii Rroxscaffold_3G00222150
rosa_rugosa Rorug07G0318600
rosa_samantha Rh7BG444800
rosa_wichuraiana Rw7G039490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 935
AccB7I CCANNNNNTGG 1 cut(s) 1295
AccII CGCG 2 cut(s) 419, 1492
AccIII TCCGGA 1 cut(s) 330
AciI CCGC 9 cut(s) 138, 176, 203, 236, 350, 566, 1252, 1407, 1604
AclWI GGATC 3 cut(s) 1118, 1131, 1589
AcoI YGGCCR 1 cut(s) 116
AcsI RAATTY 2 cut(s) 495, 1152
AcuI CTGAAG 1 cut(s) 475
AcyI GRCGYC 2 cut(s) 657, 932
AdeI CACNNNGTG 1 cut(s) 789
AfaI GTAC 2 cut(s) 299, 1042
AfiI CCNNNNNNNGG 6 cut(s) 235, 307, 508, 742, 777, 1295
AflIII ACRYGT 2 cut(s) 417, 1331
AgsI TTSAA 8 cut(s) 53, 431, 457, 466, 899, 987, 1151, 1159
AjiI CACGTC 1 cut(s) 1334
AjnI CCWGG 3 cut(s) 381, 1043, 1402
AjuI GAANNNNNNNTTGG 2 cut(s) 29, 61
AluBI AGCT 9 cut(s) 21, 622, 841, 845, 1135, 1144, 1175, 1208, 1543
AluI AGCT 9 cut(s) 21, 622, 841, 845, 1135, 1144, 1175, 1208, 1543
Alw21I GWGCWC 4 cut(s) 330, 813, 1063, 1383
Alw26I GTCTC 9 cut(s) 66, 169, 254, 633, 648, 688, 939, 972, 1328
Alw44I GTGCAC 1 cut(s) 1379
AlwI GGATC 3 cut(s) 1118, 1131, 1589
AlwNI CAGNNNCTG 1 cut(s) 697
Ama87I CYCGRG 1 cut(s) 849
Aor13HI TCCGGA 1 cut(s) 330
AoxI GGCC 7 cut(s) 55, 116, 532, 861, 994, 1429, 1545
ApaLI GTGCAC 1 cut(s) 1379
ApoI RAATTY 2 cut(s) 495, 1152
ArsI GACNNNNNNTTYG 2 cut(s) 325, 357
AspLEI GCGC 4 cut(s) 7, 446, 1494, 1566
AspS9I GGNCC 2 cut(s) 333, 862
AsuC2I CCSGG 3 cut(s) 850, 851, 886
AsuHPI GGTGA 5 cut(s) 77, 380, 836, 1234, 1372
AsuNHI GCTAGC 1 cut(s) 841
AvaI CYCGRG 1 cut(s) 849
AvaII GGWCC 1 cut(s) 333
AxyI CCTNAGG 1 cut(s) 1568
BaeGI GKGCMC 1 cut(s) 1383
BamHI GGATCC 1 cut(s) 1123
BanII GRGCYC 1 cut(s) 891
BauI CACGAG 1 cut(s) 1382
Bbv12I GWGCWC 4 cut(s) 330, 813, 1063, 1383
BbvCI CCTCAGC 1 cut(s) 1356
BccI CCATC 4 cut(s) 110, 1049, 1114, 1407
BceAI ACGGC 1 cut(s) 216
BciT130I CCWGG 3 cut(s) 383, 1045, 1404
BclI TGATCA 1 cut(s) 699
BcnI CCSGG 3 cut(s) 850, 851, 886
BcoDI GTCTC 9 cut(s) 66, 169, 254, 633, 648, 688, 939, 972, 1328
BfaI CTAG 5 cut(s) 375, 627, 842, 975, 1418
BfmI CTRYAG 1 cut(s) 1616
BfoI RGCGCY 2 cut(s) 8, 1567
BglI GCCNNNNNGGC 3 cut(s) 371, 1352, 1404
BglII AGATCT 1 cut(s) 313
Bme1390I CCNGG 6 cut(s) 383, 850, 851, 886, 1045, 1404
Bme18I GGWCC 1 cut(s) 333
BmeT110I CYCGRG 1 cut(s) 849
BmgBI CACGTC 1 cut(s) 1334
BmgT120I GGNCC 2 cut(s) 333, 862
BmiI GGNNCC 6 cut(s) 207, 240, 335, 380, 1125, 1314
BmrFI CCNGG 6 cut(s) 383, 850, 851, 886, 1045, 1404
BmrI ACTGGG 1 cut(s) 152
BmsI GCATC 2 cut(s) 1333, 1458
BmtI GCTAGC 1 cut(s) 845
BmuI ACTGGG 1 cut(s) 152
BpmI CTGGAG 3 cut(s) 302, 404, 666
Bpu10I CCTNAGC 1 cut(s) 1356
BpuEI CTTGAG 1 cut(s) 1559
BpuMI CCSGG 3 cut(s) 850, 851, 886
BsaBI GATNNNNATC 2 cut(s) 831, 1187
BsaHI GRCGYC 2 cut(s) 657, 932
BsaI GGTCTC 1 cut(s) 1328
BsaJI CCNNGG 5 cut(s) 849, 865, 1096, 1483, 1514
BsaWI WCCGGW 1 cut(s) 330
BsaXI ACNNNNNCTCC 4 cut(s) 190, 220, 630, 660
Bsc4I CCNNNNNNNGG 6 cut(s) 235, 307, 508, 742, 777, 1295
Bse118I RCCGGY 1 cut(s) 365
Bse1I ACTGG 4 cut(s) 58, 158, 319, 1056
Bse21I CCTNAGG 1 cut(s) 1568
Bse8I GATNNNNATC 2 cut(s) 831, 1187
BseAI TCCGGA 1 cut(s) 330
BseBI CCWGG 3 cut(s) 383, 1045, 1404
BseDI CCNNGG 5 cut(s) 849, 865, 1096, 1483, 1514
BseGI GGATG 3 cut(s) 862, 1060, 1399
BseJI GATNNNNATC 2 cut(s) 831, 1187
BseLI CCNNNNNNNGG 6 cut(s) 235, 307, 508, 742, 777, 1295
BseMII CTCAG 9 cut(s) 209, 438, 704, 731, 912, 1178, 1200, 1347, 1582
BseNI ACTGG 4 cut(s) 58, 158, 319, 1056
BseRI GAGGAG 4 cut(s) 401, 491, 617, 651
BseSI GKGCMC 1 cut(s) 1383
BseYI CCCAGC 1 cut(s) 1175
Bsh1236I CGCG 2 cut(s) 419, 1492
BshFI GGCC 7 cut(s) 57, 118, 534, 863, 996, 1431, 1547
BsiHKAI GWGCWC 4 cut(s) 330, 813, 1063, 1383
BsiHKCI CYCGRG 1 cut(s) 849
BsiSI CCGG 7 cut(s) 242, 293, 331, 366, 850, 885, 993
BslFI GGGAC 1 cut(s) 452
BslI CCNNNNNNNGG 6 cut(s) 235, 307, 508, 742, 777, 1295
BsmAI GTCTC 9 cut(s) 66, 169, 254, 633, 648, 688, 939, 972, 1328
BsmBI CGTCTC 2 cut(s) 648, 939
BsmFI GGGAC 1 cut(s) 452
BsmI GAATGC 2 cut(s) 1451, 1594
BsnI GGCC 7 cut(s) 57, 118, 534, 863, 996, 1431, 1547
Bso31I GGTCTC 1 cut(s) 1328
BsoBI CYCGRG 1 cut(s) 849
Bsp1286I GDGCHC 5 cut(s) 330, 813, 891, 1063, 1383
Bsp13I TCCGGA 1 cut(s) 330
Bsp143I GATC 5 cut(s) 313, 587, 699, 1123, 1581
BspACI CCGC 9 cut(s) 138, 176, 203, 236, 350, 566, 1252, 1407, 1604
BspANI GGCC 7 cut(s) 57, 118, 534, 863, 996, 1431, 1547
BspCNI CTCAG 9 cut(s) 208, 439, 703, 732, 913, 1177, 1201, 1348, 1581
BspEI TCCGGA 1 cut(s) 330
BspFNI CGCG 2 cut(s) 419, 1492
BspHI TCATGA 3 cut(s) 873, 909, 937
BspLI GGNNCC 6 cut(s) 207, 240, 335, 380, 1125, 1314
BspOI GCTAGC 1 cut(s) 845
BspPI GGATC 3 cut(s) 1118, 1131, 1589
BspTNI GGTCTC 1 cut(s) 1328
BsrFI RCCGGY 1 cut(s) 365
BsrI ACTGG 4 cut(s) 58, 158, 319, 1056
BssAI RCCGGY 1 cut(s) 365
BssECI CCNNGG 5 cut(s) 849, 865, 1096, 1483, 1514
BssMI GATC 5 cut(s) 313, 587, 699, 1123, 1581
BssNI GRCGYC 2 cut(s) 657, 932
BssSI CACGAG 1 cut(s) 1382
BssT1I CCWWGG 4 cut(s) 865, 1096, 1483, 1514
Bst2BI CACGAG 1 cut(s) 1382
Bst2UI CCWGG 3 cut(s) 383, 1045, 1404
Bst4CI ACNGT 4 cut(s) 672, 789, 895, 1468
Bst6I CTCTTC 1 cut(s) 79
BstACI GRCGYC 2 cut(s) 657, 932
BstC8I GCNNGC 9 cut(s) 147, 189, 818, 843, 947, 1033, 1037, 1490, 1545
BstF5I GGATG 3 cut(s) 862, 1060, 1399
BstFNI CGCG 2 cut(s) 419, 1492
BstH2I RGCGCY 2 cut(s) 8, 1567
BstHHI GCGC 4 cut(s) 7, 446, 1494, 1566
BstKTI GATC 5 cut(s) 316, 590, 702, 1126, 1584
BstMAI GTCTC 9 cut(s) 66, 169, 254, 633, 648, 688, 939, 972, 1328
BstMBI GATC 5 cut(s) 313, 587, 699, 1123, 1581
BstNI CCWGG 3 cut(s) 383, 1045, 1404
BstSCI CCNGG 6 cut(s) 381, 848, 849, 884, 1043, 1402
BstSFI CTRYAG 1 cut(s) 1616
BstSLI GKGCMC 1 cut(s) 1383
BstUI CGCG 2 cut(s) 419, 1492
BstX2I RGATCY 2 cut(s) 313, 1123
BstXI CCANNNNNNTGG 1 cut(s) 1051
BstYI RGATCY 2 cut(s) 313, 1123
Bsu36I CCTNAGG 1 cut(s) 1568
BsuRI GGCC 7 cut(s) 57, 118, 534, 863, 996, 1431, 1547
BtgZI GCGATG 1 cut(s) 1540
BtrI CACGTC 1 cut(s) 1334
BtsCI GGATG 3 cut(s) 862, 1060, 1399
BtsI GCAGTG 1 cut(s) 1504
BtsIMutI CAGTG 4 cut(s) 794, 918, 1464, 1504
Cac8I GCNNGC 9 cut(s) 147, 189, 818, 843, 947, 1033, 1037, 1490, 1545
CaiI CAGNNNCTG 1 cut(s) 697
CciI TCATGA 3 cut(s) 873, 909, 937
CfoI GCGC 4 cut(s) 7, 446, 1494, 1566
Cfr10I RCCGGY 1 cut(s) 365
Cfr13I GGNCC 2 cut(s) 333, 862
Cfr9I CCCGGG 1 cut(s) 849
CseI GACGC 1 cut(s) 665
Csp6I GTAC 2 cut(s) 298, 1041
CviQI GTAC 2 cut(s) 298, 1041
DpnI GATC 5 cut(s) 315, 589, 701, 1125, 1583
DpnII GATC 5 cut(s) 313, 587, 699, 1123, 1581
DraIII CACNNNGTG 1 cut(s) 789
EaeI YGGCCR 1 cut(s) 116
Eam1104I CTCTTC 1 cut(s) 79
EarI CTCTTC 1 cut(s) 79
Eco130I CCWWGG 4 cut(s) 865, 1096, 1483, 1514
Eco24I GRGCYC 1 cut(s) 891
Eco31I GGTCTC 1 cut(s) 1328
Eco32I GATATC 1 cut(s) 833
Eco47I GGWCC 1 cut(s) 333
Eco57I CTGAAG 1 cut(s) 475
Eco81I CCTNAGG 1 cut(s) 1568
Eco88I CYCGRG 1 cut(s) 849
EcoO109I RGGNCCY 1 cut(s) 862
EcoRI GAATTC 1 cut(s) 495
EcoRII CCWGG 3 cut(s) 381, 1043, 1402
EcoRV GATATC 1 cut(s) 833
EcoT14I CCWWGG 4 cut(s) 865, 1096, 1483, 1514
EcoT22I ATGCAT 2 cut(s) 1296, 1451
EcoT38I GRGCYC 1 cut(s) 891
ErhI CCWWGG 4 cut(s) 865, 1096, 1483, 1514
Esp3I CGTCTC 2 cut(s) 648, 939
FaqI GGGAC 1 cut(s) 452
FauI CCCGC 2 cut(s) 357, 559
FauNDI CATATG 1 cut(s) 1020
FbaI TGATCA 1 cut(s) 699
FokI GGATG 3 cut(s) 869, 1067, 1386
FriOI GRGCYC 1 cut(s) 891
FspBI CTAG 5 cut(s) 375, 627, 842, 975, 1418
GlaI GCGC 4 cut(s) 6, 445, 1493, 1565
GsaI CCCAGC 1 cut(s) 1179
GsuI CTGGAG 3 cut(s) 302, 404, 666
HaeII RGCGCY 2 cut(s) 8, 1567
HaeIII GGCC 7 cut(s) 57, 118, 534, 863, 996, 1431, 1547
HapII CCGG 7 cut(s) 242, 293, 331, 366, 850, 885, 993
HgaI GACGC 1 cut(s) 665
HhaI GCGC 4 cut(s) 7, 446, 1494, 1566
Hin1I GRCGYC 2 cut(s) 657, 932
Hin6I GCGC 4 cut(s) 5, 444, 1492, 1564
HinP1I GCGC 4 cut(s) 5, 444, 1492, 1564
HinfI GANTC 9 cut(s) 28, 304, 341, 593, 679, 870, 983, 1101, 1159
HpaII CCGG 7 cut(s) 242, 293, 331, 366, 850, 885, 993
HphI GGTGA 5 cut(s) 77, 380, 836, 1234, 1372
Hpy166II GTNNAC 2 cut(s) 1381, 1460
Hpy8I GTNNAC 2 cut(s) 1381, 1460
Hpy99I CGWCG 3 cut(s) 128, 226, 548
HpyAV CCTTC 9 cut(s) 55, 59, 219, 271, 499, 746, 1385, 1558, 1572
HpyCH4III ACNGT 4 cut(s) 672, 789, 895, 1468
HpyCH4IV ACGT 2 cut(s) 932, 1333
HpyCH4V TGCA 6 cut(s) 286, 775, 949, 1294, 1381, 1449
HpySE526I ACGT 2 cut(s) 932, 1333
Hsp92I GRCGYC 2 cut(s) 657, 932
HspAI GCGC 4 cut(s) 5, 444, 1492, 1564
Kpn2I TCCGGA 1 cut(s) 330
Ksp22I TGATCA 1 cut(s) 699
Kzo9I GATC 5 cut(s) 313, 587, 699, 1123, 1581
LmnI GCTCC 8 cut(s) 211, 252, 333, 378, 388, 838, 1205, 1318
LweI GCATC 2 cut(s) 1333, 1458
MaeI CTAG 5 cut(s) 375, 627, 842, 975, 1418
MaeII ACGT 2 cut(s) 932, 1333
MaeIII GTNAC 9 cut(s) 482, 629, 761, 781, 1270, 1283, 1438, 1468, 1587
MalI GATC 5 cut(s) 315, 589, 701, 1125, 1583
MboI GATC 5 cut(s) 313, 587, 699, 1123, 1581
MboII GAAGA 8 cut(s) 66, 204, 207, 323, 416, 419, 570, 619
MfeI CAATTG 1 cut(s) 287
MflI RGATCY 2 cut(s) 313, 1123
MhlI GDGCHC 5 cut(s) 330, 813, 891, 1063, 1383
MluCI AATT 4 cut(s) 287, 495, 572, 1152
MluI ACGCGT 1 cut(s) 417
MlyI GAGTC 1 cut(s) 673
MmeI TCCRAC 1 cut(s) 960
Mph1103I ATGCAT 2 cut(s) 1296, 1451
MroI TCCGGA 1 cut(s) 330
MseI TTAA 2 cut(s) 1140, 1308
MslI CAYNNNNRTG 2 cut(s) 1199, 1220
MspI CCGG 7 cut(s) 242, 293, 331, 366, 850, 885, 993
MspR9I CCNGG 6 cut(s) 383, 850, 851, 886, 1045, 1404
MunI CAATTG 1 cut(s) 287
Mva1269I GAATGC 2 cut(s) 1451, 1594
MvaI CCWGG 3 cut(s) 383, 1045, 1404
MvnI CGCG 2 cut(s) 419, 1492
NciI CCSGG 3 cut(s) 850, 851, 886
NdeI CATATG 1 cut(s) 1020
NdeII GATC 5 cut(s) 313, 587, 699, 1123, 1581
NheI GCTAGC 1 cut(s) 841
NlaIV GGNNCC 6 cut(s) 207, 240, 335, 380, 1125, 1314
NmeAIII GCCGAG 1 cut(s) 1585
NmuCI GTSAC 7 cut(s) 482, 781, 1270, 1283, 1438, 1468, 1587
NsiI ATGCAT 2 cut(s) 1296, 1451
PagI TCATGA 3 cut(s) 873, 909, 937
PctI GAATGC 2 cut(s) 1451, 1594
PfeI GAWTC 8 cut(s) 28, 304, 341, 593, 870, 983, 1101, 1159
PflMI CCANNNNNTGG 1 cut(s) 1295
PleI GAGTC 1 cut(s) 673
PpsI GAGTC 1 cut(s) 673
Psp6I CCWGG 3 cut(s) 381, 1043, 1402
PspFI CCCAGC 1 cut(s) 1175
PspGI CCWGG 3 cut(s) 381, 1043, 1402
PspN4I GGNNCC 6 cut(s) 207, 240, 335, 380, 1125, 1314
PspPI GGNCC 2 cut(s) 333, 862
PstNI CAGNNNCTG 1 cut(s) 697
PsuI RGATCY 2 cut(s) 313, 1123
RsaI GTAC 2 cut(s) 299, 1042
RsaNI GTAC 2 cut(s) 298, 1041
RseI CAYNNNNRTG 2 cut(s) 1199, 1220
SaqAI TTAA 2 cut(s) 1140, 1308
Sau3AI GATC 5 cut(s) 313, 587, 699, 1123, 1581
Sau96I GGNCC 2 cut(s) 333, 862
SchI GAGTC 1 cut(s) 673
ScrFI CCNGG 6 cut(s) 383, 850, 851, 886, 1045, 1404
SduI GDGCHC 5 cut(s) 330, 813, 891, 1063, 1383
SfaNI GCATC 2 cut(s) 1333, 1458
SfcI CTRYAG 1 cut(s) 1616
SgrAI CRCCGGYG 1 cut(s) 365
SinI GGWCC 1 cut(s) 333
SmaI CCCGGG 1 cut(s) 851
SmiMI CAYNNNNRTG 2 cut(s) 1199, 1220
SmlI CTYRAG 1 cut(s) 1538
SmoI CTYRAG 1 cut(s) 1538
Sse9I AATT 4 cut(s) 287, 495, 572, 1152
SsiI CCGC 9 cut(s) 138, 176, 203, 236, 350, 566, 1252, 1407, 1604
SspMI CTAG 5 cut(s) 375, 627, 842, 975, 1418
StyD4I CCNGG 6 cut(s) 381, 848, 849, 884, 1043, 1402
StyI CCWWGG 4 cut(s) 865, 1096, 1483, 1514
TaaI ACNGT 4 cut(s) 672, 789, 895, 1468
TaiI ACGT 2 cut(s) 935, 1336
TaqI TCGA 4 cut(s) 339, 600, 674, 1341
TasI AATT 4 cut(s) 287, 495, 572, 1152
TauI GCSGC 4 cut(s) 140, 178, 206, 1607
TfiI GAWTC 8 cut(s) 28, 304, 341, 593, 870, 983, 1101, 1159
Tru1I TTAA 2 cut(s) 1140, 1308
Tru9I TTAA 2 cut(s) 1140, 1308
TscAI CASTG 4 cut(s) 794, 925, 1471, 1511
TseFI GTSAC 7 cut(s) 482, 781, 1270, 1283, 1438, 1468, 1587
Tsp45I GTSAC 7 cut(s) 482, 781, 1270, 1283, 1438, 1468, 1587
TspDTI ATGAA 3 cut(s) 862, 1403, 1540
TspGWI ACGGA 1 cut(s) 100
TspMI CCCGGG 1 cut(s) 849
TspRI CASTG 4 cut(s) 794, 925, 1471, 1511
Van91I CCANNNNNTGG 1 cut(s) 1295
VneI GTGCAC 1 cut(s) 1379
VpaK11BI GGWCC 1 cut(s) 333
XapI RAATTY 2 cut(s) 495, 1152
XbaI TCTAGA 1 cut(s) 1417
XmaI CCCGGG 1 cut(s) 849
XspI CTAG 5 cut(s) 375, 627, 842, 975, 1418
ZraI GACGTC 1 cut(s) 933
Zsp2I ATGCAT 2 cut(s) 1296, 1451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.