Prupe.1G521200_v2.0.a1

Phospho-2-dehydro-3-deoxyheptonate aldolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015832
Physical Location & Seq
Forward (+)
42746162 .. 42751584
5423 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G521200.1

Sequence Viewer

Length: 1629 bp
ATGGCTCTCACAAGCAGCAGCTCTTTGATTCCCACCAAATCTGCCTTCATTCAAGGCCAAGGCCAGTCTCTCTTACCCTCTCCGAGAACTCACCAACCCTCTCTGCCCATCAGGCCCGTCAGGCCAATCGTGGCCGTTCATGCAGCTGAGCCTGCCAAGAACCCAGTTGTCTCCGACAAGCCAACTAAGCAGCAAAGTGCTCCAACGACGTCGTCTCCTTCTTCTTCGGCGAAGACCCACAATGCGGTTCCGGCGAAATGGAGCGTGGAGACCTGGAAATCCAAGAAGGCGCTCCAATTGCCCGACTACCCAAATCAGGAAGATCTCGAGTCGGTGCTTCGGACCATCGAATCGTTCCCTCCTATTGTGTTCGCTGGGGAGGCTCGGAGCCTAGAGGAGCGTATTGGTGAGGCCGCCATGGGCAACGCGTTTCTTCTTCAAGGCGGGGACTGCGCTGAGAGCTTCAAGGAGTTCAATGCCAATAACATTCGTGACACCTTCAGAATTCTCCTCCAAATGGGTGTCGTTCTGATGTTCGGAGGTCAAATGCCCGTTGTCAAGGTGGGAAGAATGGCGGGTCAGTTTGCGAAGCCAAGATCGGATGCTTTTGAGGAAAAGGATGGTGTGAAGCTGCCGAGTTACAGAGGGGACAATGTGAACGGAGACGCGTTCGATTTAAAGTCGAGGACTCCGGACCCTCAGAGACTGATCAGAGCCTACTGTCAATCTGCGGCTACTCTCAACCTTCTCAGGGCCTTCGCTACTGGTGGTTATGCAGCTATGCAGAGGGTCACACAGTGGAACTTGGATTTCACAGAGCACAGCGAGCAGGGTGATAGATACCGGGAGCTAGCTTCCCGGGTTGATGAGGCCCTTGGATTCATGACTGCAGCTGGACTTACAGTTGACCACCCTATCATGACAACCACTGAGTTCTGGACATCTCATGAGTGCTTGCTCTTGCCATATGAGCAGTCTCTTACTAGGTTGGATTCAACTTCCGGCCTTTACTATGATTGCTCTGCCCATATGCTTTGGGCTGGTGAGCGTACCAGGCAACTGGATGGTGCCCATGTTGAGTTCCTAAGAGGTGTTGCCAATCCCCTTGGAATTAAGGTGAGCGATAAGATGGATCCAAATGAGCTTGTTAAGCTCATTGAGATTTTGAATCCTCAGAATAAAGCCGGTAGGATAACAGTGATCACAAGAATGGGAGCTGAGAACATGAGGGTGAAACTTCCTCATCTTATTCGGGCGGTCCGCAGGGCAGGACAGATTGTCACATGGGTTAGTGACCCAATGCATGGAAACACCATAAAAGCTCCATGTGGCCTCAAAACACGCCCTTTTGACGCTATAAGGGCCGAGGTGAGAGCATTCTTTGATGTGCATGAGCAAGAAGGAAGCCACCCAGGAGGTGTTCATCTAGAGATGACAGGCCAGAATGTGACAGAATGCATTGGAGGGTCGCGCACTGTGACATTTGATGACCTTAGCTCACGCTACCATACTCACTGTGACCCAAGGCTCAATGCCTCACAATCTCTCGAGCTTGCCTTCATCATCGCCGAACGCCTTAGAAGAAGAAGGATCAAGTCACAGAGCTCCGTCACCTCGTTAGGTCTGTAG

Protein Analysis

543

Amino Acids

59.86

Weight (kDa)

8.72

Isoelectric Point (pI)

49.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22410
fragaria_vesca FvH4_5g36810
malus_domestica MD08G1186700.v1.1 MD15G1372600.v1.1
prunus_persica Prupe.1G521200_v2.0.a1
pyrus_communis pycom08g16050 pycom15g33360
rosa_chinensis RchiOBHm_Chr7g0243371
rosa_laevigata RLG00000000852
rosa_multiflora Rmu_sc0001036.1_g000028 Rmu_sc0001461.1_g000106
rosa_roxburghii Rroxscaffold_3G00222150
rosa_rugosa Rorug07G0318600
rosa_samantha Rh7BG444800
rosa_wichuraiana Rw7G039490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 212
AccB1I GGYRCC 1 cut(s) 1067
AccB7I CCANNNNNTGG 1 cut(s) 1304
AccII CGCG 3 cut(s) 428, 668, 1471
AccIII TCCGGA 1 cut(s) 691
AciI CCGC 7 cut(s) 245, 414, 444, 575, 731, 1256, 1261
AclWI GGATC 3 cut(s) 1127, 1140, 1598
AcoI YGGCCR 1 cut(s) 132
AcsI RAATTY 1 cut(s) 504
AcuI CTGAAG 1 cut(s) 484
AcyI GRCGYC 1 cut(s) 209
AdeI CACNNNGTG 1 cut(s) 798
AfaI GTAC 1 cut(s) 1051
AfiI CCNNNNNNNGG 5 cut(s) 244, 316, 517, 751, 1304
AflIII ACRYGT 2 cut(s) 426, 666
AgsI TTSAA 6 cut(s) 53, 440, 466, 475, 996, 1168
AhdI GACNNNNNGTC 1 cut(s) 1277
AjnI CCWGG 3 cut(s) 272, 1052, 1411
AjuI GAANNNNNNNTTGG 2 cut(s) 29, 61
Alw21I GWGCWC 3 cut(s) 202, 822, 1607
Alw26I GTCTC 7 cut(s) 72, 175, 219, 263, 657, 697, 981
AlwI GGATC 3 cut(s) 1127, 1140, 1598
AlwNI CAGNNNCTG 1 cut(s) 706
Ama87I CYCGRG 3 cut(s) 326, 858, 1547
Aor13HI TCCGGA 1 cut(s) 691
ApeKI GCWGC 7 cut(s) 15, 18, 143, 190, 631, 776, 890
ApoI RAATTY 1 cut(s) 504
AspLEI GCGC 3 cut(s) 292, 455, 1473
AspS9I GGNCC 7 cut(s) 114, 342, 694, 753, 871, 1258, 1362
AsuC2I CCSGG 3 cut(s) 845, 859, 860
AsuHPI GGTGA 8 cut(s) 83, 419, 845, 1055, 1129, 1243, 1381, 1603
AsuNHI GCTAGC 1 cut(s) 850
AvaI CYCGRG 3 cut(s) 326, 858, 1547
AvaII GGWCC 3 cut(s) 342, 694, 1258
BaeGI GKGCMC 1 cut(s) 1072
BamHI GGATCC 1 cut(s) 1132
BanI GGYRCC 1 cut(s) 1067
BanII GRGCYC 1 cut(s) 1607
BbsI GAAGAC 1 cut(s) 239
Bbv12I GWGCWC 3 cut(s) 202, 822, 1607
BbvI GCAGC 7 cut(s) 27, 30, 155, 202, 618, 788, 902
BccI CCATC 5 cut(s) 116, 353, 614, 1058, 1123
BceAI ACGGC 1 cut(s) 119
BciT130I CCWGG 3 cut(s) 274, 1054, 1413
BclI TGATCA 2 cut(s) 708, 1200
BcnI CCSGG 3 cut(s) 845, 859, 860
BcoDI GTCTC 7 cut(s) 72, 175, 219, 263, 657, 697, 981
BfaI CTAG 4 cut(s) 392, 851, 984, 1427
BfmI CTRYAG 2 cut(s) 888, 1625
BfoI RGCGCY 1 cut(s) 293
BglI GCCNNNNNGGC 2 cut(s) 112, 121
BglII AGATCT 1 cut(s) 322
BisI GCNGC 9 cut(s) 16, 19, 144, 191, 414, 632, 732, 777, 891
BlpI GCTNAGC 1 cut(s) 147
BlsI GCNGC 9 cut(s) 17, 20, 145, 192, 415, 633, 733, 778, 892
Bme1390I CCNGG 6 cut(s) 274, 845, 859, 860, 1054, 1413
Bme18I GGWCC 3 cut(s) 342, 694, 1258
BmeRI GACNNNNNGTC 1 cut(s) 1277
BmeT110I CYCGRG 3 cut(s) 326, 858, 1547
BmgT120I GGNCC 7 cut(s) 114, 342, 694, 753, 871, 1258, 1362
BmiI GGNNCC 5 cut(s) 249, 389, 696, 1069, 1134
BmrFI CCNGG 6 cut(s) 274, 845, 859, 860, 1054, 1413
BmrI ACTGGG 1 cut(s) 158
BmsI GCATC 1 cut(s) 592
BmtI GCTAGC 1 cut(s) 854
BmuI ACTGGG 1 cut(s) 158
BpiI GAAGAC 1 cut(s) 239
Bpu10I CCTNAGC 1 cut(s) 1493
Bpu1102I GCTNAGC 1 cut(s) 147
BpuMI CCSGG 3 cut(s) 845, 859, 860
BsaHI GRCGYC 1 cut(s) 209
BsaI GGTCTC 1 cut(s) 263
BsaJI CCNNGG 8 cut(s) 58, 417, 858, 874, 1105, 1365, 1411, 1523
BsaWI WCCGGW 1 cut(s) 691
BsaXI ACNNNNNCTCC 2 cut(s) 199, 229
Bsc4I CCNNNNNNNGG 5 cut(s) 244, 316, 517, 751, 1304
Bse118I RCCGGY 1 cut(s) 1184
Bse1I ACTGG 4 cut(s) 64, 164, 769, 1065
BseAI TCCGGA 1 cut(s) 691
BseBI CCWGG 3 cut(s) 274, 1054, 1413
BseDI CCNNGG 8 cut(s) 58, 417, 858, 874, 1105, 1365, 1411, 1523
BseGI GGATG 3 cut(s) 607, 625, 1069
BseLI CCNNNNNNNGG 5 cut(s) 244, 316, 517, 751, 1304
BseMII CTCAG 7 cut(s) 138, 447, 713, 763, 921, 1187, 1209
BseNI ACTGG 4 cut(s) 64, 164, 769, 1065
BseRI GAGGAG 2 cut(s) 410, 500
BseSI GKGCMC 1 cut(s) 1072
BseXI GCAGC 7 cut(s) 27, 30, 155, 202, 618, 788, 902
BseYI CCCAGC 1 cut(s) 374
Bsh1236I CGCG 3 cut(s) 428, 668, 1471
BshNI GGYRCC 1 cut(s) 1067
BsiHKAI GWGCWC 3 cut(s) 202, 822, 1607
BsiHKCI CYCGRG 3 cut(s) 326, 858, 1547
BsiSI CCGG 6 cut(s) 251, 692, 844, 859, 1002, 1185
BslFI GGGAC 2 cut(s) 461, 662
BslI CCNNNNNNNGG 5 cut(s) 244, 316, 517, 751, 1304
BsmAI GTCTC 7 cut(s) 72, 175, 219, 263, 657, 697, 981
BsmBI CGTCTC 2 cut(s) 219, 657
BsmFI GGGAC 2 cut(s) 461, 662
BsmI GAATGC 2 cut(s) 1376, 1460
Bso31I GGTCTC 1 cut(s) 263
BsoBI CYCGRG 3 cut(s) 326, 858, 1547
Bsp1286I GDGCHC 4 cut(s) 202, 822, 1072, 1607
Bsp13I TCCGGA 1 cut(s) 691
Bsp143I GATC 6 cut(s) 322, 596, 708, 1132, 1200, 1590
Bsp1720I GCTNAGC 1 cut(s) 147
Bsp19I CCATGG 1 cut(s) 417
BspACI CCGC 7 cut(s) 245, 414, 444, 575, 731, 1256, 1261
BspCNI CTCAG 7 cut(s) 139, 448, 712, 762, 922, 1186, 1210
BspEI TCCGGA 1 cut(s) 691
BspFNI CGCG 3 cut(s) 428, 668, 1471
BspHI TCATGA 3 cut(s) 882, 918, 946
BspLI GGNNCC 5 cut(s) 249, 389, 696, 1069, 1134
BspMAI CTGCAG 1 cut(s) 892
BspOI GCTAGC 1 cut(s) 854
BspPI GGATC 3 cut(s) 1127, 1140, 1598
BspT107I GGYRCC 1 cut(s) 1067
BspTNI GGTCTC 1 cut(s) 263
BsrFI RCCGGY 1 cut(s) 1184
BsrI ACTGG 4 cut(s) 64, 164, 769, 1065
BssAI RCCGGY 1 cut(s) 1184
BssECI CCNNGG 8 cut(s) 58, 417, 858, 874, 1105, 1365, 1411, 1523
BssMI GATC 6 cut(s) 322, 596, 708, 1132, 1200, 1590
BssNI GRCGYC 1 cut(s) 209
BssT1I CCWWGG 5 cut(s) 58, 417, 874, 1105, 1523
Bst2UI CCWGG 3 cut(s) 274, 1054, 1413
Bst4CI ACNGT 6 cut(s) 722, 798, 904, 1198, 1477, 1517
BstACI GRCGYC 1 cut(s) 209
BstC8I GCNNGC 5 cut(s) 153, 827, 852, 956, 1554
BstDSI CCRYGG 1 cut(s) 417
BstF5I GGATG 3 cut(s) 607, 625, 1069
BstFNI CGCG 3 cut(s) 428, 668, 1471
BstH2I RGCGCY 1 cut(s) 293
BstHHI GCGC 3 cut(s) 292, 455, 1473
BstKTI GATC 6 cut(s) 325, 599, 711, 1135, 1203, 1593
BstMAI GTCTC 7 cut(s) 72, 175, 219, 263, 657, 697, 981
BstMBI GATC 6 cut(s) 322, 596, 708, 1132, 1200, 1590
BstNI CCWGG 3 cut(s) 274, 1054, 1413
BstSCI CCNGG 6 cut(s) 272, 843, 857, 858, 1052, 1411
BstSFI CTRYAG 2 cut(s) 888, 1625
BstSLI GKGCMC 1 cut(s) 1072
BstUI CGCG 3 cut(s) 428, 668, 1471
BstV1I GCAGC 7 cut(s) 27, 30, 155, 202, 618, 788, 902
BstV2I GAAGAC 1 cut(s) 239
BstX2I RGATCY 2 cut(s) 322, 1132
BstXI CCANNNNNNTGG 1 cut(s) 1060
BstYI RGATCY 2 cut(s) 322, 1132
BtgI CCRYGG 1 cut(s) 417
BtgZI GCGATG 1 cut(s) 1549
BtsCI GGATG 3 cut(s) 607, 625, 1069
BtsIMutI CAGTG 5 cut(s) 803, 927, 1203, 1473, 1513
Cac8I GCNNGC 5 cut(s) 153, 827, 852, 956, 1554
CaiI CAGNNNCTG 1 cut(s) 706
CciI TCATGA 3 cut(s) 882, 918, 946
CfoI GCGC 3 cut(s) 292, 455, 1473
Cfr10I RCCGGY 1 cut(s) 1184
Cfr13I GGNCC 7 cut(s) 114, 342, 694, 753, 871, 1258, 1362
Cfr9I CCCGGG 1 cut(s) 858
CpoI CGGWCCG 1 cut(s) 1258
CseI GACGC 2 cut(s) 674, 1361
Csp6I GTAC 1 cut(s) 1050
CspI CGGWCCG 1 cut(s) 1258
CviQI GTAC 1 cut(s) 1050
DpnI GATC 6 cut(s) 324, 598, 710, 1134, 1202, 1592
DpnII GATC 6 cut(s) 322, 596, 708, 1132, 1200, 1590
DraI TTTAAA 1 cut(s) 678
DraIII CACNNNGTG 1 cut(s) 798
DriI GACNNNNNGTC 1 cut(s) 1277
EaeI YGGCCR 1 cut(s) 132
Eam1105I GACNNNNNGTC 1 cut(s) 1277
Ecl136II GAGCTC 1 cut(s) 1605
Eco130I CCWWGG 5 cut(s) 58, 417, 874, 1105, 1523
Eco24I GRGCYC 1 cut(s) 1607
Eco31I GGTCTC 1 cut(s) 263
Eco47I GGWCC 3 cut(s) 342, 694, 1258
Eco53kI GAGCTC 1 cut(s) 1605
Eco57I CTGAAG 1 cut(s) 484
Eco88I CYCGRG 3 cut(s) 326, 858, 1547
EcoICRI GAGCTC 1 cut(s) 1605
EcoO109I RGGNCCY 2 cut(s) 753, 871
EcoRI GAATTC 1 cut(s) 504
EcoRII CCWGG 3 cut(s) 272, 1052, 1411
EcoT14I CCWWGG 5 cut(s) 58, 417, 874, 1105, 1523
EcoT22I ATGCAT 2 cut(s) 1305, 1460
EcoT38I GRGCYC 1 cut(s) 1607
ErhI CCWWGG 5 cut(s) 58, 417, 874, 1105, 1523
Esp3I CGTCTC 2 cut(s) 219, 657
FaqI GGGAC 2 cut(s) 461, 662
FauI CCCGC 2 cut(s) 437, 568
FauNDI CATATG 2 cut(s) 967, 1029
FbaI TGATCA 2 cut(s) 708, 1200
Fnu4HI GCNGC 9 cut(s) 16, 19, 144, 191, 414, 632, 732, 777, 891
FokI GGATG 3 cut(s) 614, 632, 1076
FriOI GRGCYC 1 cut(s) 1607
Fsp4HI GCNGC 9 cut(s) 16, 19, 144, 191, 414, 632, 732, 777, 891
FspBI CTAG 4 cut(s) 392, 851, 984, 1427
GlaI GCGC 3 cut(s) 291, 454, 1472
GluI GCNGC 9 cut(s) 16, 19, 144, 191, 414, 632, 732, 777, 891
GsaI CCCAGC 1 cut(s) 378
HaeII RGCGCY 1 cut(s) 293
HapII CCGG 6 cut(s) 251, 692, 844, 859, 1002, 1185
HgaI GACGC 2 cut(s) 674, 1361
HhaI GCGC 3 cut(s) 292, 455, 1473
Hin1I GRCGYC 1 cut(s) 209
Hin6I GCGC 3 cut(s) 290, 453, 1471
HinP1I GCGC 3 cut(s) 290, 453, 1471
HincII GTYRAC 1 cut(s) 907
HindII GTYRAC 1 cut(s) 907
HinfI GANTC 7 cut(s) 28, 329, 350, 688, 879, 992, 1168
HpaII CCGG 6 cut(s) 251, 692, 844, 859, 1002, 1185
HphI GGTGA 8 cut(s) 83, 419, 845, 1055, 1129, 1243, 1381, 1603
Hpy166II GTNNAC 2 cut(s) 658, 907
Hpy8I GTNNAC 2 cut(s) 658, 907
Hpy99I CGWCG 2 cut(s) 211, 214
HpyAV CCTTC 9 cut(s) 55, 228, 280, 508, 755, 766, 1394, 1567, 1581
HpyCH4III ACNGT 6 cut(s) 722, 798, 904, 1198, 1477, 1517
HpyCH4IV ACGT 1 cut(s) 209
HpyCH4V TGCA 7 cut(s) 143, 776, 784, 890, 1303, 1390, 1458
HpySE526I ACGT 1 cut(s) 209
Hsp92I GRCGYC 1 cut(s) 209
HspAI GCGC 3 cut(s) 290, 453, 1471
Kpn2I TCCGGA 1 cut(s) 691
Ksp22I TGATCA 2 cut(s) 708, 1200
Kzo9I GATC 6 cut(s) 322, 596, 708, 1132, 1200, 1590
LmnI GCTCC 9 cut(s) 205, 261, 297, 387, 397, 847, 1214, 1327, 1610
Lsp1109I GCAGC 7 cut(s) 27, 30, 155, 202, 618, 788, 902
LweI GCATC 1 cut(s) 592
MaeI CTAG 4 cut(s) 392, 851, 984, 1427
MaeII ACGT 1 cut(s) 209
MalI GATC 6 cut(s) 324, 598, 710, 1134, 1202, 1592
MboI GATC 6 cut(s) 322, 596, 708, 1132, 1200, 1590
MboII GAAGA 9 cut(s) 213, 216, 244, 332, 425, 428, 579, 1593, 1596
MfeI CAATTG 1 cut(s) 296
MflI RGATCY 2 cut(s) 322, 1132
MhlI GDGCHC 4 cut(s) 202, 822, 1072, 1607
MluCI AATT 3 cut(s) 296, 504, 1110
MluI ACGCGT 2 cut(s) 426, 666
MlyI GAGTC 2 cut(s) 338, 682
MmeI TCCRAC 3 cut(s) 198, 227, 969
Mph1103I ATGCAT 2 cut(s) 1305, 1460
MroI TCCGGA 1 cut(s) 691
MseI TTAA 3 cut(s) 677, 1113, 1149
MslI CAYNNNNRTG 2 cut(s) 1208, 1229
MspA1I CMGCKG 2 cut(s) 146, 893
MspI CCGG 6 cut(s) 251, 692, 844, 859, 1002, 1185
MspR9I CCNGG 6 cut(s) 274, 845, 859, 860, 1054, 1413
MunI CAATTG 1 cut(s) 296
Mva1269I GAATGC 2 cut(s) 1376, 1460
MvaI CCWGG 3 cut(s) 274, 1054, 1413
MvnI CGCG 3 cut(s) 428, 668, 1471
NciI CCSGG 3 cut(s) 845, 859, 860
NcoI CCATGG 1 cut(s) 417
NdeI CATATG 2 cut(s) 967, 1029
NdeII GATC 6 cut(s) 322, 596, 708, 1132, 1200, 1590
NheI GCTAGC 1 cut(s) 850
NlaIV GGNNCC 5 cut(s) 249, 389, 696, 1069, 1134
NmeAIII GCCGAG 2 cut(s) 660, 1390
NmuCI GTSAC 9 cut(s) 491, 790, 1279, 1292, 1447, 1477, 1517, 1596, 1609
NsiI ATGCAT 2 cut(s) 1305, 1460
PaeR7I CTCGAG 2 cut(s) 326, 1547
PagI TCATGA 3 cut(s) 882, 918, 946
PctI GAATGC 2 cut(s) 1376, 1460
PfeI GAWTC 5 cut(s) 28, 350, 879, 992, 1168
PflFI GACNNNGTC 1 cut(s) 211
PflMI CCANNNNNTGG 1 cut(s) 1304
PkrI GCNGC 9 cut(s) 17, 20, 145, 192, 415, 633, 733, 778, 892
PleI GAGTC 2 cut(s) 337, 682
PpsI GAGTC 2 cut(s) 337, 682
Psp124BI GAGCTC 1 cut(s) 1607
Psp6I CCWGG 3 cut(s) 272, 1052, 1411
PspFI CCCAGC 1 cut(s) 374
PspGI CCWGG 3 cut(s) 272, 1052, 1411
PspN4I GGNNCC 5 cut(s) 249, 389, 696, 1069, 1134
PspPI GGNCC 7 cut(s) 114, 342, 694, 753, 871, 1258, 1362
PstI CTGCAG 1 cut(s) 892
PstNI CAGNNNCTG 1 cut(s) 706
PsuI RGATCY 2 cut(s) 322, 1132
PsyI GACNNNGTC 1 cut(s) 211
PvuII CAGCTG 2 cut(s) 146, 893
RsaI GTAC 1 cut(s) 1051
RsaNI GTAC 1 cut(s) 1050
RseI CAYNNNNRTG 2 cut(s) 1208, 1229
Rsr2I CGGWCCG 1 cut(s) 1258
RsrII CGGWCCG 1 cut(s) 1258
SacI GAGCTC 1 cut(s) 1607
SaqAI TTAA 3 cut(s) 677, 1113, 1149
SatI GCNGC 9 cut(s) 16, 19, 144, 191, 414, 632, 732, 777, 891
Sau3AI GATC 6 cut(s) 322, 596, 708, 1132, 1200, 1590
Sau96I GGNCC 7 cut(s) 114, 342, 694, 753, 871, 1258, 1362
SchI GAGTC 2 cut(s) 338, 682
ScrFI CCNGG 6 cut(s) 274, 845, 859, 860, 1054, 1413
SduI GDGCHC 4 cut(s) 202, 822, 1072, 1607
SfaNI GCATC 1 cut(s) 592
SfcI CTRYAG 2 cut(s) 888, 1625
SfiI GGCCNNNNNGGCC 1 cut(s) 121
Sfr274I CTCGAG 2 cut(s) 326, 1547
SinI GGWCC 3 cut(s) 342, 694, 1258
SlaI CTCGAG 2 cut(s) 326, 1547
SmaI CCCGGG 1 cut(s) 860
SmiMI CAYNNNNRTG 2 cut(s) 1208, 1229
SmlI CTYRAG 2 cut(s) 326, 1547
SmoI CTYRAG 2 cut(s) 326, 1547
Sse9I AATT 3 cut(s) 296, 504, 1110
SsiI CCGC 7 cut(s) 245, 414, 444, 575, 731, 1256, 1261
SspMI CTAG 4 cut(s) 392, 851, 984, 1427
SstI GAGCTC 1 cut(s) 1607
StyD4I CCNGG 6 cut(s) 272, 843, 857, 858, 1052, 1411
StyI CCWWGG 5 cut(s) 58, 417, 874, 1105, 1523
TaaI ACNGT 6 cut(s) 722, 798, 904, 1198, 1477, 1517
TaiI ACGT 1 cut(s) 212
TaqI TCGA 5 cut(s) 327, 348, 672, 683, 1548
TasI AATT 3 cut(s) 296, 504, 1110
TauI GCSGC 2 cut(s) 416, 734
TfiI GAWTC 5 cut(s) 28, 350, 879, 992, 1168
Tru1I TTAA 3 cut(s) 677, 1113, 1149
Tru9I TTAA 3 cut(s) 677, 1113, 1149
TscAI CASTG 5 cut(s) 803, 934, 1203, 1480, 1520
TseFI GTSAC 9 cut(s) 491, 790, 1279, 1292, 1447, 1477, 1517, 1596, 1609
TseI GCWGC 7 cut(s) 15, 18, 143, 190, 631, 776, 890
Tsp45I GTSAC 9 cut(s) 491, 790, 1279, 1292, 1447, 1477, 1517, 1596, 1609
TspDTI ATGAA 5 cut(s) 37, 128, 871, 1412, 1549
TspGWI ACGGA 2 cut(s) 675, 1597
TspMI CCCGGG 1 cut(s) 858
TspRI CASTG 5 cut(s) 803, 934, 1203, 1480, 1520
Tth111I GACNNNGTC 1 cut(s) 211
Van91I CCANNNNNTGG 1 cut(s) 1304
VpaK11BI GGWCC 3 cut(s) 342, 694, 1258
XapI RAATTY 1 cut(s) 504
XbaI TCTAGA 1 cut(s) 1426
XhoI CTCGAG 2 cut(s) 326, 1547
XmaI CCCGGG 1 cut(s) 858
XspI CTAG 4 cut(s) 392, 851, 984, 1427
ZraI GACGTC 1 cut(s) 210
Zsp2I ATGCAT 2 cut(s) 1305, 1460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.