Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001461.1

Orthogroup ID

OG0015832

Physical Location & Seq

Genomic Coordinates Reverse (-)

415457 .. 419357

Gene Structure 3901 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001461.1_g000106.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

atggctctcacgggcagcagctcaatcattgcccccaaatcttccttcattcaaagccagtcgactcttctaccctccaaacctcaccaaccttctctccccgtcaggcccatcaggcccatcgtcgccgtccacgcagccgagcccgccaagaatccagctgtgtccaccaagcagcagacggtgccagcagcttcgccgtcaactgcggcgtctagtggttcgaaaagctggaatgcggcgccggcgaaatggagtttggacaggtggaagtccaagaaggcggtgcaattgccggagtacccgaataaggaggatctggagtcggtgctccggacgattgagtctttcccgccgatcgtcttcgccggcgaggctaggagtttagaggagcgcctcgctgaggcttccatgggaaacgcgtttcttcttcaaggtggggattgtgcggagagcttcaaggagttcaatgccaataatattcgtgacaccttcagaattctgctccagatgggcgtcgttttgatgttcggaggccaaatgccagtaattaaggtgggaaggatggcgggtcagtttgcgaagccgagatccgacccgtttgaggagaaggatggtgtcaagcttccaagttacagaggggacaatgtgaacggagacacgtttgattcaaagtcaaggactccggaccctgagagattgatcagagcctactgtcaatctgcggcgactctcaaccttctcagggccttcgcaaccggtggttatgcggctatgcagagagttacccagtggaacttggatttcacagagcacagcgaacagggtgataggtaccgagaactagctcaccgggttgatgaggcccttggattcatgaatgcagctgggctcacagttgaccatcctatcatgacaaccactgagttctggacatcccatgagtgcttgcttttgccttatgaacagtcgctcactaggttggactcaacttctgggctctactatgattgctctgcccatatgctttgggtcggcgagcgaaccaggcaactggatggtgcccatattgagttcctaagaggtgttgctaatcccctgggaatcaaggtgagtgataagatggatcccaatgagcttgttaagctcatagagattttgaatcctcaaaataaagccgggaggataactgtgatcacaagaatgggagctgagaacatgagagtgaaacttcctcatcttattagggcagtccgtagggcaggacaaattgtcacatgggtcagcgaccctatgcatggaaacaccatcaaggctccatgtggtctcaagacacgcccttttgatgcgataagggctgaggtcagagcattctttgacgtgcacgaccaagaaggaagccacccagggggtgttcatctggagatgacgggccagaatgtgactgaatgcattggaggatcacggactgtgacattcgacgaccttagctcgcgctaccatactcactgtgacccgaggctaaatgcctcccaatctcttgagcttgccttcattattgctgagcgcctgaggagacgaaggatcaagtcacaactctctgttgcctctttaggtctgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 ko02024 map00400 map01100 map01110 map01130 map01230 map02024

Pfam Domains

Protein Families

DAHP_synth_2

Protein Analysis

540

Amino Acids

59.7

Weight (kDa)

8.84

Isoelectric Point (pI)

50.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015832)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22410
fragaria_vesca	FvH4_5g36810
malus_domestica	MD08G1186700.v1.1 MD15G1372600.v1.1
prunus_persica	Prupe.1G521200_v2.0.a1
pyrus_communis	pycom08g16050 pycom15g33360
rosa_chinensis	RchiOBHm_Chr7g0243371
rosa_laevigata	RLG00000000852
rosa_multiflora	Rmu_sc0001036.1_g000028 Rmu_sc0001461.1_g000106
rosa_roxburghii	Rroxscaffold_3G00222150
rosa_rugosa	Rorug07G0318600
rosa_samantha	Rh7BG444800
rosa_wichuraiana	Rw7G039490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	343
Acc65I	GGTACC	1 cut(s)	834
AccB1I	GGYRCC	4 cut(s)	184, 241, 834, 1061
AccI	GTMKAC	1 cut(s)	62
AccII	CGCG	2 cut(s)	422, 1495
AccIII	TCCGGA	2 cut(s)	333, 685
AciI	CCGC	9 cut(s)	147, 209, 239, 284, 353, 449, 569, 725, 770
AclWI	GGATC	6 cut(s)	324, 585, 1121, 1134, 1468, 1592
AcsI	RAATTY	1 cut(s)	498
AcuI	CTGAAG	1 cut(s)	478
AcyI	GRCGYC	3 cut(s)	212, 242, 516
AfaI	GTAC	2 cut(s)	302, 836
AfiI	CCNNNNNNNGG	6 cut(s)	310, 403, 604, 745, 1298, 1408
AflIII	ACRYGT	2 cut(s)	420, 660
AgeI	ACCGGT	1 cut(s)	758
AgsI	TTSAA	6 cut(s)	53, 434, 460, 469, 672, 1162
AhdI	GACNNNNNGTC	1 cut(s)	1271
AjiI	CACGTC	1 cut(s)	1381
AjnI	CCWGG	3 cut(s)	1046, 1098, 1405
AjuI	GAANNNNNNNTTGG	4 cut(s)	29, 61, 242, 274
Alw21I	GWGCWC	3 cut(s)	333, 816, 1386
Alw26I	GTCTC	3 cut(s)	651, 1331, 1570
Alw44I	GTGCAC	1 cut(s)	1382
AlwI	GGATC	6 cut(s)	324, 585, 1121, 1134, 1468, 1592
Ama87I	CYCGRG	1 cut(s)	1516
Aor13HI	TCCGGA	2 cut(s)	333, 685
AoxI	GGCC	6 cut(s)	107, 116, 535, 747, 864, 1432
ApaLI	GTGCAC	1 cut(s)	1382
ApeKI	GCWGC	6 cut(s)	15, 18, 137, 175, 191, 884
ApoI	RAATTY	1 cut(s)	498
AsiGI	ACCGGT	1 cut(s)	758
Asp718I	GGTACC	1 cut(s)	834
AspLEI	GCGC	4 cut(s)	244, 396, 1497, 1569
AspS9I	GGNCC	6 cut(s)	108, 117, 688, 747, 865, 1432
AsuC2I	CCSGG	2 cut(s)	854, 1180
AsuHPI	GGTGA	4 cut(s)	77, 839, 842, 1123
AsuII	TTCGAA	1 cut(s)	224
AvaI	CYCGRG	1 cut(s)	1516
AvaII	GGWCC	1 cut(s)	688
AxyI	CCTNAGG	1 cut(s)	1571
BaeGI	GKGCMC	2 cut(s)	1066, 1386
BamHI	GGATCC	1 cut(s)	1126
BanI	GGYRCC	4 cut(s)	184, 241, 834, 1061
BanII	GRGCYC	3 cut(s)	147, 894, 1002
BbsI	GAAGAC	1 cut(s)	355
Bbv12I	GWGCWC	3 cut(s)	333, 816, 1386
BbvCI	CCTCAGC	2 cut(s)	402, 1359
BbvI	GCAGC	6 cut(s)	27, 30, 149, 187, 203, 896
BccI	CCATC	9 cut(s)	119, 128, 505, 559, 608, 912, 1052, 1117, 1316
BceAI	ACGGC	2 cut(s)	113, 184
BciT130I	CCWGG	3 cut(s)	1048, 1100, 1407
BclI	TGATCA	2 cut(s)	702, 1194
BcnI	CCSGG	2 cut(s)	854, 1180
BcoDI	GTCTC	3 cut(s)	651, 1331, 1570
BfaI	CTAG	4 cut(s)	216, 378, 845, 978
BfmI	CTRYAG	1 cut(s)	1619
BfoI	RGCGCY	3 cut(s)	245, 397, 1570
BglI	GCCNNNNNGGC	2 cut(s)	115, 374
BlpI	GCTNAGC	1 cut(s)	1563
Bme1390I	CCNGG	5 cut(s)	854, 1048, 1100, 1180, 1407
Bme18I	GGWCC	1 cut(s)	688
BmeRI	GACNNNNNGTC	1 cut(s)	1271
BmeT110I	CYCGRG	1 cut(s)	1516
BmgBI	CACGTC	1 cut(s)	1381
BmgT120I	GGNCC	6 cut(s)	108, 117, 688, 747, 865, 1432
BmiI	GGNNCC	7 cut(s)	186, 243, 690, 836, 1063, 1128, 1317
BmrFI	CCNGG	5 cut(s)	854, 1048, 1100, 1180, 1407
BmrI	ACTGGG	1 cut(s)	784
BmsI	GCATC	1 cut(s)	1336
BmuI	ACTGGG	1 cut(s)	784
BpiI	GAAGAC	1 cut(s)	355
BpmI	CTGGAG	3 cut(s)	341, 491, 1442
Bpu10I	CCTNAGC	3 cut(s)	402, 1359, 1487
Bpu1102I	GCTNAGC	1 cut(s)	1563
Bpu14I	TTCGAA	1 cut(s)	224
BpuEI	CTTGAG	2 cut(s)	1313, 1562
BpuMI	CCSGG	2 cut(s)	854, 1180
BsaHI	GRCGYC	3 cut(s)	212, 242, 516
BsaI	GGTCTC	1 cut(s)	1331
BsaJI	CCNNGG	7 cut(s)	411, 868, 1098, 1099, 1405, 1406, 1517
BsaWI	WCCGGW	3 cut(s)	333, 685, 758
BsaXI	ACNNNNNCTCC	2 cut(s)	81, 111
Bsc4I	CCNNNNNNNGG	6 cut(s)	310, 403, 604, 745, 1298, 1408
Bse118I	RCCGGY	3 cut(s)	244, 368, 758
Bse1I	ACTGG	4 cut(s)	58, 545, 790, 1059
Bse21I	CCTNAGG	1 cut(s)	1571
Bse3DI	GCAATG	1 cut(s)	27
BseAI	TCCGGA	2 cut(s)	333, 685
BseBI	CCWGG	3 cut(s)	1048, 1100, 1407
BseDI	CCNNGG	7 cut(s)	411, 868, 1098, 1099, 1405, 1406, 1517
BseGI	GGATG	5 cut(s)	570, 619, 904, 935, 1063
BseLI	CCNNNNNNNGG	6 cut(s)	310, 403, 604, 745, 1298, 1408
BseMI	GCAATG	1 cut(s)	27
BseMII	CTCAG	8 cut(s)	393, 684, 757, 915, 1203, 1350, 1554, 1562
BseNI	ACTGG	4 cut(s)	58, 545, 790, 1059
BseRI	GAGGAG	3 cut(s)	404, 620, 1588
BseSI	GKGCMC	2 cut(s)	1066, 1386
BseXI	GCAGC	6 cut(s)	27, 30, 149, 187, 203, 896
BseYI	CCCAGC	1 cut(s)	887
Bsh1236I	CGCG	2 cut(s)	422, 1495
Bsh1285I	CGRYCG	1 cut(s)	360
BshFI	GGCC	6 cut(s)	109, 118, 537, 749, 866, 1434
BshNI	GGYRCC	4 cut(s)	184, 241, 834, 1061
BshTI	ACCGGT	1 cut(s)	758
BsiEI	CGRYCG	1 cut(s)	360
BsiHKAI	GWGCWC	3 cut(s)	333, 816, 1386
BsiHKCI	CYCGRG	1 cut(s)	1516
BsiSI	CCGG	8 cut(s)	245, 296, 334, 369, 686, 759, 853, 1179
BslFI	GGGAC	1 cut(s)	656
BslI	CCNNNNNNNGG	6 cut(s)	310, 403, 604, 745, 1298, 1408
BsmAI	GTCTC	3 cut(s)	651, 1331, 1570
BsmBI	CGTCTC	1 cut(s)	1570
BsmFI	GGGAC	1 cut(s)	656
BsmI	GAATGC	4 cut(s)	241, 886, 1370, 1454
BsnI	GGCC	6 cut(s)	109, 118, 537, 749, 866, 1434
Bso31I	GGTCTC	1 cut(s)	1331
BsoBI	CYCGRG	1 cut(s)	1516
Bsp119I	TTCGAA	1 cut(s)	224
Bsp1286I	GDGCHC	7 cut(s)	147, 333, 816, 894, 1002, 1066, 1386
Bsp13I	TCCGGA	2 cut(s)	333, 685
Bsp143I	GATC	8 cut(s)	316, 357, 590, 702, 1126, 1194, 1460, 1584
Bsp1720I	GCTNAGC	1 cut(s)	1563
Bsp19I	CCATGG	1 cut(s)	411
BspACI	CCGC	9 cut(s)	147, 209, 239, 284, 353, 449, 569, 725, 770
BspANI	GGCC	6 cut(s)	109, 118, 537, 749, 866, 1434
BspCNI	CTCAG	8 cut(s)	394, 685, 756, 916, 1204, 1351, 1555, 1563
BspEI	TCCGGA	2 cut(s)	333, 685
BspFNI	CGCG	2 cut(s)	422, 1495
BspHI	TCATGA	2 cut(s)	876, 912
BspLI	GGNNCC	7 cut(s)	186, 243, 690, 836, 1063, 1128, 1317
BspPI	GGATC	6 cut(s)	324, 585, 1121, 1134, 1468, 1592
BspT104I	TTCGAA	1 cut(s)	224
BspT107I	GGYRCC	4 cut(s)	184, 241, 834, 1061
BspTNI	GGTCTC	1 cut(s)	1331
BsrDI	GCAATG	1 cut(s)	27
BsrFI	RCCGGY	3 cut(s)	244, 368, 758
BsrI	ACTGG	4 cut(s)	58, 545, 790, 1059
BssAI	RCCGGY	3 cut(s)	244, 368, 758
BssECI	CCNNGG	7 cut(s)	411, 868, 1098, 1099, 1405, 1406, 1517
BssMI	GATC	8 cut(s)	316, 357, 590, 702, 1126, 1194, 1460, 1584
BssNI	GRCGYC	3 cut(s)	212, 242, 516
BssT1I	CCWWGG	2 cut(s)	411, 868
Bst2UI	CCWGG	3 cut(s)	1048, 1100, 1407
Bst4CI	ACNGT	7 cut(s)	184, 716, 898, 969, 1192, 1471, 1511
Bst6I	CTCTTC	1 cut(s)	72
BstACI	GRCGYC	3 cut(s)	212, 242, 516
BstAPI	GCANNNNNTGC	1 cut(s)	184
BstBI	TTCGAA	1 cut(s)	224
BstC8I	GCNNGC	8 cut(s)	147, 189, 246, 370, 950, 1040, 1493, 1548
BstDSI	CCRYGG	1 cut(s)	411
BstENI	CCTNNNNNAGG	1 cut(s)	401
BstF5I	GGATG	5 cut(s)	570, 619, 904, 935, 1063
BstFNI	CGCG	2 cut(s)	422, 1495
BstH2I	RGCGCY	3 cut(s)	245, 397, 1570
BstHHI	GCGC	4 cut(s)	244, 396, 1497, 1569
BstKTI	GATC	8 cut(s)	319, 360, 593, 705, 1129, 1197, 1463, 1587
BstMAI	GTCTC	3 cut(s)	651, 1331, 1570
BstMBI	GATC	8 cut(s)	316, 357, 590, 702, 1126, 1194, 1460, 1584
BstMCI	CGRYCG	1 cut(s)	360
BstMWI	GCNNNNNNNGC	9 cut(s)	115, 134, 146, 184, 245, 374, 1048, 1144, 1355
BstNI	CCWGG	3 cut(s)	1048, 1100, 1407
BstSCI	CCNGG	5 cut(s)	852, 1046, 1098, 1178, 1405
BstSFI	CTRYAG	1 cut(s)	1619
BstSLI	GKGCMC	2 cut(s)	1066, 1386
BstUI	CGCG	2 cut(s)	422, 1495
BstV1I	GCAGC	6 cut(s)	27, 30, 149, 187, 203, 896
BstV2I	GAAGAC	1 cut(s)	355
BstX2I	RGATCY	3 cut(s)	316, 590, 1126
BstXI	CCANNNNNNTGG	1 cut(s)	1054
BstYI	RGATCY	3 cut(s)	316, 590, 1126
Bsu36I	CCTNAGG	1 cut(s)	1571
BsuRI	GGCC	6 cut(s)	109, 118, 537, 749, 866, 1434
BtgI	CCRYGG	1 cut(s)	411
BtrI	CACGTC	1 cut(s)	1381
BtsCI	GGATG	5 cut(s)	570, 619, 904, 935, 1063
BtsIMutI	CAGTG	3 cut(s)	797, 921, 1507
Cac8I	GCNNGC	8 cut(s)	147, 189, 246, 370, 950, 1040, 1493, 1548
CciI	TCATGA	2 cut(s)	876, 912
CfoI	GCGC	4 cut(s)	244, 396, 1497, 1569
Cfr10I	RCCGGY	3 cut(s)	244, 368, 758
Cfr13I	GGNCC	6 cut(s)	108, 117, 688, 747, 865, 1432
CseI	GACGC	2 cut(s)	201, 505
Csp6I	GTAC	2 cut(s)	301, 835
CspAI	ACCGGT	1 cut(s)	758
CviAII	CATG	8 cut(s)	412, 877, 913, 941, 1219, 1278, 1298, 1320
CviQI	GTAC	2 cut(s)	301, 835
DinI	GGCGCC	1 cut(s)	243
DpnI	GATC	8 cut(s)	318, 359, 592, 704, 1128, 1196, 1462, 1586
DpnII	GATC	8 cut(s)	316, 357, 590, 702, 1126, 1194, 1460, 1584
DrdI	GACNNNNNNGTC	1 cut(s)	343
DriI	GACNNNNNGTC	1 cut(s)	1271
DseDI	GACNNNNNNGTC	1 cut(s)	343
Eam1104I	CTCTTC	1 cut(s)	72
Eam1105I	GACNNNNNGTC	1 cut(s)	1271
EarI	CTCTTC	1 cut(s)	72
Eco130I	CCWWGG	2 cut(s)	411, 868
Eco24I	GRGCYC	3 cut(s)	147, 894, 1002
Eco31I	GGTCTC	1 cut(s)	1331
Eco47I	GGWCC	1 cut(s)	688
Eco57I	CTGAAG	1 cut(s)	478
Eco81I	CCTNAGG	1 cut(s)	1571
Eco88I	CYCGRG	1 cut(s)	1516
EcoNI	CCTNNNNNAGG	1 cut(s)	401
EcoO109I	RGGNCCY	2 cut(s)	747, 865
EcoRI	GAATTC	1 cut(s)	498
EcoRII	CCWGG	3 cut(s)	1046, 1098, 1405
EcoT14I	CCWWGG	2 cut(s)	411, 868
EcoT22I	ATGCAT	2 cut(s)	1299, 1454
EcoT38I	GRGCYC	3 cut(s)	147, 894, 1002
EgeI	GGCGCC	1 cut(s)	243
EheI	GGCGCC	1 cut(s)	243
ErhI	CCWWGG	2 cut(s)	411, 868
Esp3I	CGTCTC	1 cut(s)	1570
FaeI	CATG	8 cut(s)	415, 880, 916, 944, 1222, 1281, 1301, 1323
FaqI	GGGAC	1 cut(s)	656
FatI	CATG	8 cut(s)	411, 876, 912, 940, 1218, 1277, 1297, 1319
FauI	CCCGC	3 cut(s)	154, 360, 562
FauNDI	CATATG	1 cut(s)	1023
FbaI	TGATCA	2 cut(s)	702, 1194
FblI	GTMKAC	1 cut(s)	62
FokI	GGATG	5 cut(s)	577, 626, 891, 922, 1070
FriOI	GRGCYC	3 cut(s)	147, 894, 1002
FspBI	CTAG	4 cut(s)	216, 378, 845, 978
GlaI	GCGC	4 cut(s)	243, 395, 1496, 1568
GsaI	CCCAGC	1 cut(s)	891
GsuI	CTGGAG	3 cut(s)	341, 491, 1442
HaeII	RGCGCY	3 cut(s)	245, 397, 1570
HaeIII	GGCC	6 cut(s)	109, 118, 537, 749, 866, 1434
HapII	CCGG	8 cut(s)	245, 296, 334, 369, 686, 759, 853, 1179
HgaI	GACGC	2 cut(s)	201, 505
HhaI	GCGC	4 cut(s)	244, 396, 1497, 1569
Hin1I	GRCGYC	3 cut(s)	212, 242, 516
Hin1II	CATG	8 cut(s)	415, 880, 916, 944, 1222, 1281, 1301, 1323
Hin6I	GCGC	4 cut(s)	242, 394, 1495, 1567
HinP1I	GCGC	4 cut(s)	242, 394, 1495, 1567
HincII	GTYRAC	3 cut(s)	63, 204, 901
HindII	GTYRAC	3 cut(s)	63, 204, 901
HindIII	AAGCTT	1 cut(s)	623
HpaII	CCGG	8 cut(s)	245, 296, 334, 369, 686, 759, 853, 1179
HphI	GGTGA	4 cut(s)	77, 839, 842, 1123
Hpy166II	GTNNAC	7 cut(s)	63, 133, 168, 204, 652, 901, 1384
Hpy188I	TCNGA	5 cut(s)	497, 533, 595, 707, 1367
Hpy8I	GTNNAC	7 cut(s)	63, 133, 168, 204, 652, 901, 1384
Hpy99I	CGWCG	3 cut(s)	128, 521, 1484
HpyCH4III	ACNGT	7 cut(s)	184, 716, 898, 969, 1192, 1471, 1511
HpyCH4IV	ACGT	2 cut(s)	662, 1380
HpyCH4V	TGCA	6 cut(s)	289, 778, 884, 1297, 1384, 1452
HpyF10VI	GCNNNNNNNGC	9 cut(s)	115, 134, 146, 184, 245, 374, 1048, 1144, 1355
HpySE526I	ACGT	2 cut(s)	662, 1380
Hsp92I	GRCGYC	3 cut(s)	212, 242, 516
Hsp92II	CATG	8 cut(s)	415, 880, 916, 944, 1222, 1281, 1301, 1323
HspAI	GCGC	4 cut(s)	242, 394, 1495, 1567
KasI	GGCGCC	1 cut(s)	241
Kpn2I	TCCGGA	2 cut(s)	333, 685
KpnI	GGTACC	1 cut(s)	838
KroI	GCCGGC	2 cut(s)	244, 368
KroNI	GCCGGC	2 cut(s)	246, 370
Ksp22I	TGATCA	2 cut(s)	702, 1194
Kzo9I	GATC	8 cut(s)	316, 357, 590, 702, 1126, 1194, 1460, 1584
LmnI	GCTCC	5 cut(s)	336, 391, 510, 1208, 1321
Lsp1109I	GCAGC	6 cut(s)	27, 30, 149, 187, 203, 896
LweI	GCATC	1 cut(s)	1336
MaeI	CTAG	4 cut(s)	216, 378, 845, 978
MaeII	ACGT	2 cut(s)	662, 1380
MaeIII	GTNAC	8 cut(s)	485, 632, 784, 1273, 1441, 1471, 1511, 1590
MalI	GATC	8 cut(s)	318, 359, 592, 704, 1128, 1196, 1462, 1586
MboI	GATC	8 cut(s)	316, 357, 590, 702, 1126, 1194, 1460, 1584
MboII	GAAGA	5 cut(s)	33, 59, 355, 419, 422
MfeI	CAATTG	1 cut(s)	290
MflI	RGATCY	3 cut(s)	316, 590, 1126
MhlI	GDGCHC	7 cut(s)	147, 333, 816, 894, 1002, 1066, 1386
MluCI	AATT	4 cut(s)	290, 498, 549, 1269
MluI	ACGCGT	1 cut(s)	420
Mly113I	GGCGCC	1 cut(s)	242
MlyI	GAGTC	6 cut(s)	58, 332, 353, 676, 724, 980
MmeI	TCCRAC	2 cut(s)	618, 963
Mph1103I	ATGCAT	2 cut(s)	1299, 1454
MreI	CGCCGGCG	2 cut(s)	244, 368
MroI	TCCGGA	2 cut(s)	333, 685
MroNI	GCCGGC	2 cut(s)	244, 368
MseI	TTAA	2 cut(s)	552, 1143
MslI	CAYNNNNRTG	2 cut(s)	1202, 1223
MspA1I	CMGCKG	2 cut(s)	161, 887
MspI	CCGG	8 cut(s)	245, 296, 334, 369, 686, 759, 853, 1179
MspR9I	CCNGG	5 cut(s)	854, 1048, 1100, 1180, 1407
MunI	CAATTG	1 cut(s)	290
Mva1269I	GAATGC	4 cut(s)	241, 886, 1370, 1454
MvaI	CCWGG	3 cut(s)	1048, 1100, 1407
MvnI	CGCG	2 cut(s)	422, 1495
MwoI	GCNNNNNNNGC	9 cut(s)	115, 134, 146, 184, 245, 374, 1048, 1144, 1355
NaeI	GCCGGC	2 cut(s)	246, 370
NarI	GGCGCC	1 cut(s)	242
NciI	CCSGG	2 cut(s)	854, 1180
NcoI	CCATGG	1 cut(s)	411
NdeI	CATATG	1 cut(s)	1023
NdeII	GATC	8 cut(s)	316, 357, 590, 702, 1126, 1194, 1460, 1584
NgoMIV	GCCGGC	2 cut(s)	244, 368
NlaIII	CATG	8 cut(s)	415, 880, 916, 944, 1222, 1281, 1301, 1323
NlaIV	GGNNCC	7 cut(s)	186, 243, 690, 836, 1063, 1128, 1317
NmeAIII	GCCGAG	2 cut(s)	166, 612
NmuCI	GTSAC	6 cut(s)	485, 1273, 1441, 1471, 1511, 1590
NsiI	ATGCAT	2 cut(s)	1299, 1454
NspV	TTCGAA	1 cut(s)	224
PagI	TCATGA	2 cut(s)	876, 912
PasI	CCCWGGG	2 cut(s)	1099, 1406
PctI	GAATGC	4 cut(s)	241, 886, 1370, 1454
PdiI	GCCGGC	2 cut(s)	246, 370
PfeI	GAWTC	5 cut(s)	154, 668, 873, 1104, 1162
PinAI	ACCGGT	1 cut(s)	758
Ple19I	CGATCG	1 cut(s)	360
PleI	GAGTC	6 cut(s)	58, 331, 352, 676, 724, 980
PluTI	GGCGCC	1 cut(s)	245
PpsI	GAGTC	6 cut(s)	58, 331, 352, 676, 724, 980
Psp6I	CCWGG	3 cut(s)	1046, 1098, 1405
PspFI	CCCAGC	1 cut(s)	887
PspGI	CCWGG	3 cut(s)	1046, 1098, 1405
PspN4I	GGNNCC	7 cut(s)	186, 243, 690, 836, 1063, 1128, 1317
PspPI	GGNCC	6 cut(s)	108, 117, 688, 747, 865, 1432
PsuI	RGATCY	3 cut(s)	316, 590, 1126
PvuI	CGATCG	1 cut(s)	360
PvuII	CAGCTG	2 cut(s)	161, 887
RsaI	GTAC	2 cut(s)	302, 836
RsaNI	GTAC	2 cut(s)	301, 835
RseI	CAYNNNNRTG	2 cut(s)	1202, 1223
SalI	GTCGAC	1 cut(s)	61
SaqAI	TTAA	2 cut(s)	552, 1143
Sau3AI	GATC	8 cut(s)	316, 357, 590, 702, 1126, 1194, 1460, 1584
Sau96I	GGNCC	6 cut(s)	108, 117, 688, 747, 865, 1432
SchI	GAGTC	6 cut(s)	58, 332, 353, 676, 724, 980
ScrFI	CCNGG	5 cut(s)	854, 1048, 1100, 1180, 1407
SduI	GDGCHC	7 cut(s)	147, 333, 816, 894, 1002, 1066, 1386
SfaNI	GCATC	1 cut(s)	1336
SfcI	CTRYAG	1 cut(s)	1619
SfiI	GGCCNNNNNGGCC	1 cut(s)	115
SfoI	GGCGCC	1 cut(s)	243
SfuI	TTCGAA	1 cut(s)	224
SgrAI	CRCCGGYG	2 cut(s)	244, 368
SinI	GGWCC	1 cut(s)	688
SmiMI	CAYNNNNRTG	2 cut(s)	1202, 1223
SmlI	CTYRAG	2 cut(s)	1328, 1541
SmoI	CTYRAG	2 cut(s)	1328, 1541
Sse9I	AATT	4 cut(s)	290, 498, 549, 1269
SsiI	CCGC	9 cut(s)	147, 209, 239, 284, 353, 449, 569, 725, 770
SspDI	GGCGCC	1 cut(s)	241
SspI	AATATT	1 cut(s)	481
SspMI	CTAG	4 cut(s)	216, 378, 845, 978
StyD4I	CCNGG	5 cut(s)	852, 1046, 1098, 1178, 1405
StyI	CCWWGG	2 cut(s)	411, 868
TaaI	ACNGT	7 cut(s)	184, 716, 898, 969, 1192, 1471, 1511
TaiI	ACGT	2 cut(s)	665, 1383
TaqI	TCGA	3 cut(s)	62, 224, 1479
TasI	AATT	4 cut(s)	290, 498, 549, 1269
TauI	GCSGC	4 cut(s)	212, 242, 728, 773
TfiI	GAWTC	5 cut(s)	154, 668, 873, 1104, 1162
Tru1I	TTAA	2 cut(s)	552, 1143
Tru9I	TTAA	2 cut(s)	552, 1143
TscAI	CASTG	3 cut(s)	797, 928, 1514
TseFI	GTSAC	6 cut(s)	485, 1273, 1441, 1471, 1511, 1590
TseI	GCWGC	6 cut(s)	15, 18, 137, 175, 191, 884
Tsp45I	GTSAC	6 cut(s)	485, 1273, 1441, 1471, 1511, 1590
TspDTI	ATGAA	6 cut(s)	37, 865, 893, 978, 1406, 1543
TspGWI	ACGGA	3 cut(s)	669, 1244, 1480
TspRI	CASTG	3 cut(s)	797, 928, 1514
VneI	GTGCAC	1 cut(s)	1382
VpaK11BI	GGWCC	1 cut(s)	688
XagI	CCTNNNNNAGG	1 cut(s)	401
XapI	RAATTY	1 cut(s)	498
XmiI	GTMKAC	1 cut(s)	62
XspI	CTAG	4 cut(s)	216, 378, 845, 978
Zsp2I	ATGCAT	2 cut(s)	1299, 1454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.