Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0011213

Physical Location & Seq

Genomic Coordinates Forward (+)

1483975 .. 1487485

Gene Structure 3511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1020600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGAAAGACAAGTTCAAGGGCTTCATGAAGAACACCTTCTCGTCTTCGTCCTCCGGTAAATTCAAGGGCCAAGGCCGAGTCTTGGGATCGTCTTCTTCCTCTGGCCCCGCCGATTCGGTCCTCATTCGCCCTAAGCAGACTCCCCATTCCAATCCCAAACCCGTCCCGAATTCGAATTCAAATTCAAATTCTTCGGTCGCCTCCCCAAATCCCAAGCCTTCGCCACAGAAAACGCAGATTATTCATCAGGAGAAAGCGCAAATTCCTGATCAGAGCCAGGCGGAGCCGTCGTTCAATTCGAAGCCTGATCGAAAAACAGAAACTGGGTTTGATCCGTTTGACGCTCTGATCACGCCGGGGAAGAGATCCCAGAACGGGTTTACGCTAAATGTCTTCGAATGTCCGATTTGCGGGCAATCGTTTAGGTCGGAAGACGAGGTCTCCGTACATGTAGATAGCTGTGCTAATACTTCGGTGGAGAACAAAAGTGTGGAGGGTGTTGGCGTTTCGCGGTCGCCGGATAACGGGTCTGAGTCGTCGAGGAGCGAATTGGAAGCTCGCATTGGTACATTTTCTTCAGGAAATCCGGCTGCCGGGTCAGTTGAGGTTGTTCTGAGGCTGTTGAGGAATATAGTTAAGGAACCGGAGAACGTGAAGTTTAGAAGGATTCGGATGAGTAATCCGAAGATAAGGGAGTCCCTTGGTGAGGTTGTGGGAGGCATTGAGTTGCTGGAGTTTGTGGGGTTTGAATTGAAAGAGGAGGATGGGGAGATGTGGGCGGTAATGGAGGTTCCAAGGGAAGAACAAATTAATTTGATGAAAAGGGGAATAGCATTACTGGAACCGCCGAAGGTACAAGAAGTAGATATTTCGGCATCCATTGCTTCATTGAAGGTGGATGAACCAGTTGAACCAAGGAAGGTTGACCGGCAGACGAGGGTCTTCTTTTCGGTCTCTGAAAGTGTGGCAGCAAGAATTGAGGTACCAGCATCTTTCTACAACCTCTCAGCTACGGAGCTGAAAAGAGAAGCTGAAATGAGAAAGAAGAAGATTGAAGATTCACAGATGTTGATCCCAAAGTCATTCAAGGAAAAGCAGGCAAAAGCTGCTAAAAGGAGATACAGAAAAACTGTTATCCGGATCCAGTTTCCCGATGGAGTGGTGCTCCAGGGTGTTTTTTCTCCTTTGGAGCCAACCAGCTCTTTGTACGAGTATGTGAGCTCAGCACTGAAAGAGCCTAGTTTGGAATTCGAGCTGTTAAATCCTGTAGCCCTCAAACGGCGGGTGATCCCTCATTTTCCAGCAGCAGGAAAGAAAGCAGCAACACTAGCTGATGAGGATCTGATGCCCTCGGCTCTTGTCAAGTTCAAACCCATCGAAACAGATTCGGTTGTCTTCACAGGGCTGTGTAATGACCTCCTTGAGATAAGTGAACCACTTACGAGCGGTTCAGCTGCTGCTCCTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005769 GO:0005770 GO:0005773 GO:0005774 GO:0005829 GO:0006508 GO:0006807 GO:0006810 GO:0006914 GO:0006950 GO:0006952 GO:0007034 GO:0007041 GO:0008150 GO:0008152 GO:0008333 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010008 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0016192 GO:0016197 GO:0016236 GO:0019538 GO:0019898 GO:0030163 GO:0031090 GO:0031410 GO:0031901 GO:0031902 GO:0031982 GO:0032509 GO:0032510 GO:0032991 GO:0033554 GO:0034976 GO:0036503 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0061919 GO:0071704 GO:0071985 GO:0097708 GO:0098542 GO:0098588 GO:0098805 GO:0098852 GO:1901564 GO:1901565 GO:1901575 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

PUB UBX

Protein Analysis

490

Amino Acids

53.62

Weight (kDa)

8.45

Isoelectric Point (pI)

56.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB	PF09409	200 - 273	7.2e-18	PUB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011213)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01650 AT2G01650 AT2G01650
fragaria_vesca	FvH4_4g33820
malus_domestica	MD13G1029800.v1.1 MD16G1020600.v1.1
prunus_persica	Prupe.1G331600_v2.0.a1 Prupe.1G331600_v2.0.a1
pyrus_communis	pycom13g01820 pycom16g01850
rosa_chinensis	RchiOBHm_Chr4g0443331
rosa_laevigata	RLG00000005937
rosa_multiflora	Rmu_ssc0000122.1_g000008
rosa_roxburghii	Rroxscaffold_5G00383910
rosa_rugosa	Rorug04G0345500
rosa_samantha	Rh4AG400600 Rh4BG412200 Rh4CG427600 Rh4DG407600
rosa_wichuraiana	Rw4G034560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	982
AccB1I	GGYRCC	1 cut(s)	982
AccBSI	CCGCTC	1 cut(s)	1446
AccII	CGCG	1 cut(s)	511
AccIII	TCCGGA	1 cut(s)	1137
AciI	CCGC	8 cut(s)	108, 281, 411, 511, 779, 845, 1282, 1446
AclWI	GGATC	8 cut(s)	94, 326, 360, 1066, 1135, 1148, 1282, 1347
AcsI	RAATTY	7 cut(s)	59, 169, 175, 181, 187, 261, 1247
AcuI	CTGAAG	1 cut(s)	561
AfaI	GTAC	5 cut(s)	447, 568, 855, 984, 1208
AfiI	CCNNNNNNNGG	8 cut(s)	82, 375, 410, 524, 593, 706, 1278, 1307
AflIII	ACRYGT	1 cut(s)	448
AjnI	CCWGG	2 cut(s)	276, 1167
AjuI	GAANNNNNNNTTGG	2 cut(s)	546, 578
AloI	GAACNNNNNNTCC	2 cut(s)	275, 307
Alw21I	GWGCWC	2 cut(s)	1167, 1223
Alw26I	GTCTC	2 cut(s)	445, 958
AlwI	GGATC	8 cut(s)	94, 326, 360, 1066, 1135, 1148, 1282, 1347
AlwNI	CAGNNNCTG	2 cut(s)	323, 1457
Aor13HI	TCCGGA	1 cut(s)	1137
AoxI	GGCC	3 cut(s)	67, 73, 103
ApeKI	GCWGC	7 cut(s)	590, 968, 1106, 1304, 1319, 1454, 1457
ApoI	RAATTY	7 cut(s)	59, 169, 175, 181, 187, 261, 1247
AseI	ATTAAT	1 cut(s)	810
Asp700I	GAANNNNTTC	1 cut(s)	35
Asp718I	GGTACC	1 cut(s)	982
AspLEI	GCGC	1 cut(s)	259
AspS9I	GGNCC	3 cut(s)	67, 104, 118
AsuC2I	CCSGG	2 cut(s)	357, 595
AsuHPI	GGTGA	2 cut(s)	716, 1297
AsuII	TTCGAA	3 cut(s)	173, 299, 396
AvaII	GGWCC	1 cut(s)	118
BamHI	GGATCC	1 cut(s)	1140
BanI	GGYRCC	1 cut(s)	982
BanII	GRGCYC	1 cut(s)	1223
BarI	GAAGNNNNNNTAC	2 cut(s)	559, 591
BbsI	GAAGAC	6 cut(s)	36, 84, 385, 438, 934, 1387
Bbv12I	GWGCWC	2 cut(s)	1167, 1223
BbvI	GCAGC	7 cut(s)	577, 980, 1093, 1316, 1331, 1441, 1444
BccI	CCATC	3 cut(s)	758, 1148, 1382
BceAI	ACGGC	2 cut(s)	271, 1295
BciT130I	CCWGG	2 cut(s)	278, 1169
BclI	TGATCA	2 cut(s)	268, 348
BcnI	CCSGG	2 cut(s)	357, 595
BcoDI	GTCTC	2 cut(s)	445, 958
BfaI	CTAG	2 cut(s)	1239, 1328
BfmI	CTRYAG	1 cut(s)	1266
BisI	GCNGC	7 cut(s)	591, 969, 1107, 1305, 1320, 1455, 1458
BlpI	GCTNAGC	1 cut(s)	1222
BlsI	GCNGC	7 cut(s)	592, 970, 1108, 1306, 1321, 1456, 1459
Bme1390I	CCNGG	4 cut(s)	278, 357, 595, 1169
Bme18I	GGWCC	1 cut(s)	118
BmgT120I	GGNCC	3 cut(s)	67, 104, 118
BmiI	GGNNCC	8 cut(s)	106, 285, 642, 792, 843, 984, 1142, 1191
BmrFI	CCNGG	4 cut(s)	278, 357, 595, 1169
BmrI	ACTGGG	1 cut(s)	333
BmsI	GCATC	3 cut(s)	884, 998, 1335
BmuI	ACTGGG	1 cut(s)	333
BoxI	GACNNNNGTC	1 cut(s)	938
BpiI	GAAGAC	6 cut(s)	36, 84, 385, 438, 934, 1387
BplI	GAGNNNNNCTC	2 cut(s)	1149, 1181
BpmI	CTGGAG	2 cut(s)	752, 1151
Bpu10I	CCTNAGC	1 cut(s)	132
Bpu1102I	GCTNAGC	1 cut(s)	1222
Bpu14I	TTCGAA	3 cut(s)	173, 299, 396
BpuEI	CTTGAG	1 cut(s)	1442
BpuMI	CCSGG	2 cut(s)	357, 595
BsaBI	GATNNNNATC	2 cut(s)	1070, 1338
BsaI	GGTCTC	2 cut(s)	445, 958
BsaJI	CCNNGG	7 cut(s)	70, 356, 700, 794, 914, 1168, 1350
BsaWI	WCCGGW	3 cut(s)	53, 643, 1137
BsaXI	ACNNNNNCTCC	4 cut(s)	275, 305, 425, 455
Bsc4I	CCNNNNNNNGG	8 cut(s)	82, 375, 410, 524, 593, 706, 1278, 1307
Bse118I	RCCGGY	1 cut(s)	927
Bse1I	ACTGG	4 cut(s)	328, 843, 905, 1144
Bse3DI	GCAATG	1 cut(s)	879
Bse8I	GATNNNNATC	2 cut(s)	1070, 1338
BseAI	TCCGGA	1 cut(s)	1137
BseBI	CCWGG	2 cut(s)	278, 1169
BseDI	CCNNGG	7 cut(s)	70, 356, 700, 794, 914, 1168, 1350
BseGI	GGATG	4 cut(s)	678, 769, 875, 904
BseJI	GATNNNNATC	2 cut(s)	1070, 1338
BseLI	CCNNNNNNNGG	8 cut(s)	82, 375, 410, 524, 593, 706, 1278, 1307
BseMI	GCAATG	1 cut(s)	879
BseMII	CTCAG	4 cut(s)	522, 605, 1020, 1236
BseNI	ACTGG	4 cut(s)	328, 843, 905, 1144
BseRI	GAGGAG	2 cut(s)	556, 773
BseXI	GCAGC	7 cut(s)	577, 980, 1093, 1316, 1331, 1441, 1444
Bsh1236I	CGCG	1 cut(s)	511
Bsh1285I	CGRYCG	2 cut(s)	198, 515
BshFI	GGCC	3 cut(s)	69, 75, 105
BshNI	GGYRCC	1 cut(s)	982
BsiEI	CGRYCG	2 cut(s)	198, 515
BsiHKAI	GWGCWC	2 cut(s)	1167, 1223
BsiSI	CCGG	8 cut(s)	54, 356, 518, 587, 594, 644, 928, 1138
BslFI	GGGAC	2 cut(s)	149, 682
BslI	CCNNNNNNNGG	8 cut(s)	82, 375, 410, 524, 593, 706, 1278, 1307
BsmAI	GTCTC	2 cut(s)	445, 958
BsmFI	GGGAC	2 cut(s)	149, 682
BsnI	GGCC	3 cut(s)	69, 75, 105
Bso31I	GGTCTC	2 cut(s)	445, 958
Bsp119I	TTCGAA	3 cut(s)	173, 299, 396
Bsp1286I	GDGCHC	2 cut(s)	1167, 1223
Bsp13I	TCCGGA	1 cut(s)	1137
Bsp1720I	GCTNAGC	1 cut(s)	1222
BspACI	CCGC	8 cut(s)	108, 281, 411, 511, 779, 845, 1282, 1446
BspANI	GGCC	3 cut(s)	69, 75, 105
BspCNI	CTCAG	4 cut(s)	523, 606, 1019, 1235
BspEI	TCCGGA	1 cut(s)	1137
BspFNI	CGCG	1 cut(s)	511
BspHI	TCATGA	1 cut(s)	24
BspLI	GGNNCC	8 cut(s)	106, 285, 642, 792, 843, 984, 1142, 1191
BspPI	GGATC	8 cut(s)	94, 326, 360, 1066, 1135, 1148, 1282, 1347
BspT104I	TTCGAA	3 cut(s)	173, 299, 396
BspT107I	GGYRCC	1 cut(s)	982
BspTNI	GGTCTC	2 cut(s)	445, 958
BsrBI	CCGCTC	1 cut(s)	1446
BsrDI	GCAATG	1 cut(s)	879
BsrFI	RCCGGY	1 cut(s)	927
BsrI	ACTGG	4 cut(s)	328, 843, 905, 1144
BssAI	RCCGGY	1 cut(s)	927
BssECI	CCNNGG	7 cut(s)	70, 356, 700, 794, 914, 1168, 1350
BssT1I	CCWWGG	4 cut(s)	70, 700, 794, 914
Bst2UI	CCWGG	2 cut(s)	278, 1169
Bst4CI	ACNGT	1 cut(s)	1132
Bst6I	CTCTTC	1 cut(s)	356
BstAPI	GCANNNNNTGC	2 cut(s)	881, 1106
BstBI	TTCGAA	3 cut(s)	173, 299, 396
BstC8I	GCNNGC	3 cut(s)	413, 559, 1098
BstDEI	CTNAG	5 cut(s)	132, 531, 614, 1006, 1222
BstENI	CCTNNNNNAGG	1 cut(s)	704
BstF5I	GGATG	4 cut(s)	678, 769, 875, 904
BstFNI	CGCG	1 cut(s)	511
BstHHI	GCGC	1 cut(s)	259
BstMAI	GTCTC	2 cut(s)	445, 958
BstMCI	CGRYCG	2 cut(s)	198, 515
BstMWI	GCNNNNNNNGC	3 cut(s)	881, 1106, 1328
BstNI	CCWGG	2 cut(s)	278, 1169
BstNSI	RCATGY	1 cut(s)	452
BstPAI	GACNNNNGTC	1 cut(s)	938
BstSCI	CCNGG	4 cut(s)	276, 355, 593, 1167
BstSFI	CTRYAG	1 cut(s)	1266
BstUI	CGCG	1 cut(s)	511
BstV1I	GCAGC	7 cut(s)	577, 980, 1093, 1316, 1331, 1441, 1444
BstV2I	GAAGAC	6 cut(s)	36, 84, 385, 438, 934, 1387
BstX2I	RGATCY	3 cut(s)	365, 1140, 1339
BstYI	RGATCY	3 cut(s)	365, 1140, 1339
BsuRI	GGCC	3 cut(s)	69, 75, 105
BtsCI	GGATG	4 cut(s)	678, 769, 875, 904
BtsIMutI	CAGTG	1 cut(s)	1226
Cac8I	GCNNGC	3 cut(s)	413, 559, 1098
CaiI	CAGNNNCTG	2 cut(s)	323, 1457
CciI	TCATGA	1 cut(s)	24
CfoI	GCGC	1 cut(s)	259
Cfr10I	RCCGGY	1 cut(s)	927
Cfr13I	GGNCC	3 cut(s)	67, 104, 118
CseI	GACGC	1 cut(s)	350
Csp6I	GTAC	5 cut(s)	446, 567, 854, 983, 1207
CviAII	CATG	2 cut(s)	25, 449
CviQI	GTAC	5 cut(s)	446, 567, 854, 983, 1207
DdeI	CTNAG	5 cut(s)	132, 531, 614, 1006, 1222
Eam1104I	CTCTTC	1 cut(s)	356
EarI	CTCTTC	1 cut(s)	356
EciI	GGCGGA	1 cut(s)	296
Ecl136II	GAGCTC	1 cut(s)	1221
Eco130I	CCWWGG	4 cut(s)	70, 700, 794, 914
Eco24I	GRGCYC	1 cut(s)	1223
Eco31I	GGTCTC	2 cut(s)	445, 958
Eco47I	GGWCC	1 cut(s)	118
Eco53kI	GAGCTC	1 cut(s)	1221
Eco57I	CTGAAG	1 cut(s)	561
EcoICRI	GAGCTC	1 cut(s)	1221
EcoNI	CCTNNNNNAGG	1 cut(s)	704
EcoRI	GAATTC	3 cut(s)	169, 175, 1247
EcoRII	CCWGG	2 cut(s)	276, 1167
EcoT14I	CCWWGG	4 cut(s)	70, 700, 794, 914
EcoT38I	GRGCYC	1 cut(s)	1223
ErhI	CCWWGG	4 cut(s)	70, 700, 794, 914
FaeI	CATG	2 cut(s)	28, 452
FaiI	YATR	4 cut(s)	26, 450, 632, 1215
FalI	AAGNNNNNCTT	2 cut(s)	20, 52
FaqI	GGGAC	2 cut(s)	149, 682
FatI	CATG	2 cut(s)	24, 448
FauI	CCCGC	3 cut(s)	115, 404, 1275
FbaI	TGATCA	2 cut(s)	268, 348
Fnu4HI	GCNGC	7 cut(s)	591, 969, 1107, 1305, 1320, 1455, 1458
FokI	GGATG	4 cut(s)	685, 776, 862, 911
FriOI	GRGCYC	1 cut(s)	1223
Fsp4HI	GCNGC	7 cut(s)	591, 969, 1107, 1305, 1320, 1455, 1458
FspBI	CTAG	2 cut(s)	1239, 1328
GlaI	GCGC	1 cut(s)	258
GluI	GCNGC	7 cut(s)	591, 969, 1107, 1305, 1320, 1455, 1458
GsuI	CTGGAG	2 cut(s)	752, 1151
HaeIII	GGCC	3 cut(s)	69, 75, 105
HapII	CCGG	8 cut(s)	54, 356, 518, 587, 594, 644, 928, 1138
HgaI	GACGC	1 cut(s)	350
HhaI	GCGC	1 cut(s)	259
Hin1II	CATG	2 cut(s)	28, 452
Hin6I	GCGC	1 cut(s)	257
HinP1I	GCGC	1 cut(s)	257
HincII	GTYRAC	1 cut(s)	925
HindII	GTYRAC	1 cut(s)	925
HinfI	GANTC	8 cut(s)	78, 113, 139, 533, 667, 695, 1058, 1385
HpaII	CCGG	8 cut(s)	54, 356, 518, 587, 594, 644, 928, 1138
HphI	GGTGA	2 cut(s)	716, 1297
Hpy166II	GTNNAC	3 cut(s)	381, 925, 1433
Hpy188III	TCNNGA	7 cut(s)	25, 166, 248, 266, 579, 1138, 1151
Hpy8I	GTNNAC	3 cut(s)	381, 925, 1433
Hpy99I	CGWCG	2 cut(s)	292, 541
HpyAV	CCTTC	6 cut(s)	46, 228, 657, 844, 886, 913
HpyCH4III	ACNGT	1 cut(s)	1132
HpyCH4IV	ACGT	1 cut(s)	651
HpyF10VI	GCNNNNNNNGC	3 cut(s)	881, 1106, 1328
HpyF3I	CTNAG	5 cut(s)	132, 531, 614, 1006, 1222
HpySE526I	ACGT	1 cut(s)	651
Hsp92II	CATG	2 cut(s)	28, 452
HspAI	GCGC	1 cut(s)	257
Kpn2I	TCCGGA	1 cut(s)	1137
KpnI	GGTACC	1 cut(s)	986
Ksp22I	TGATCA	2 cut(s)	268, 348
LmnI	GCTCC	6 cut(s)	283, 543, 1015, 1170, 1189, 1465
Lsp1109I	GCAGC	7 cut(s)	577, 980, 1093, 1316, 1331, 1441, 1444
LweI	GCATC	3 cut(s)	884, 998, 1335
MaeI	CTAG	2 cut(s)	1239, 1328
MaeII	ACGT	1 cut(s)	651
MbiI	CCGCTC	1 cut(s)	1446
MflI	RGATCY	3 cut(s)	365, 1140, 1339
MhlI	GDGCHC	2 cut(s)	1167, 1223
MlyI	GAGTC	4 cut(s)	87, 133, 542, 704
MmeI	TCCRAC	1 cut(s)	408
MroI	TCCGGA	1 cut(s)	1137
MroXI	GAANNNNTTC	1 cut(s)	35
MseI	TTAA	3 cut(s)	636, 810, 1259
MspA1I	CMGCKG	1 cut(s)	1454
MspI	CCGG	8 cut(s)	54, 356, 518, 587, 594, 644, 928, 1138
MspR9I	CCNGG	4 cut(s)	278, 357, 595, 1169
MvaI	CCWGG	2 cut(s)	278, 1169
MvnI	CGCG	1 cut(s)	511
MwoI	GCNNNNNNNGC	3 cut(s)	881, 1106, 1328
NciI	CCSGG	2 cut(s)	357, 595
NlaIII	CATG	2 cut(s)	28, 452
NlaIV	GGNNCC	8 cut(s)	106, 285, 642, 792, 843, 984, 1142, 1191
NmeAIII	GCCGAG	2 cut(s)	101, 1331
NspI	RCATGY	1 cut(s)	452
NspV	TTCGAA	3 cut(s)	173, 299, 396
PagI	TCATGA	1 cut(s)	24
PciI	ACATGT	1 cut(s)	448
PcsI	WCGNNNNNNNCGW	2 cut(s)	296, 441
PdmI	GAANNNNTTC	1 cut(s)	35
PfeI	GAWTC	4 cut(s)	113, 667, 1058, 1385
PflFI	GACNNNGTC	1 cut(s)	437
PkrI	GCNGC	7 cut(s)	592, 970, 1108, 1306, 1321, 1456, 1459
PleI	GAGTC	4 cut(s)	86, 133, 541, 703
PpsI	GAGTC	4 cut(s)	86, 133, 541, 703
PscI	ACATGT	1 cut(s)	448
PshAI	GACNNNNGTC	1 cut(s)	938
PshBI	ATTAAT	1 cut(s)	810
Psp124BI	GAGCTC	1 cut(s)	1223
Psp6I	CCWGG	2 cut(s)	276, 1167
PspGI	CCWGG	2 cut(s)	276, 1167
PspN4I	GGNNCC	8 cut(s)	106, 285, 642, 792, 843, 984, 1142, 1191
PspPI	GGNCC	3 cut(s)	67, 104, 118
PsrI	GAACNNNNNNTAC	2 cut(s)	774, 806
PstNI	CAGNNNCTG	2 cut(s)	323, 1457
PsuI	RGATCY	3 cut(s)	365, 1140, 1339
PsyI	GACNNNGTC	1 cut(s)	437
PvuII	CAGCTG	1 cut(s)	1454
RsaI	GTAC	5 cut(s)	447, 568, 855, 984, 1208
RsaNI	GTAC	5 cut(s)	446, 567, 854, 983, 1207
SacI	GAGCTC	1 cut(s)	1223
SaqAI	TTAA	3 cut(s)	636, 810, 1259
SatI	GCNGC	7 cut(s)	591, 969, 1107, 1305, 1320, 1455, 1458
Sau96I	GGNCC	3 cut(s)	67, 104, 118
SchI	GAGTC	4 cut(s)	87, 133, 542, 704
ScrFI	CCNGG	4 cut(s)	278, 357, 595, 1169
SduI	GDGCHC	2 cut(s)	1167, 1223
SfaNI	GCATC	3 cut(s)	884, 998, 1335
SfcI	CTRYAG	1 cut(s)	1266
SfuI	TTCGAA	3 cut(s)	173, 299, 396
SinI	GGWCC	1 cut(s)	118
SmlI	CTYRAG	1 cut(s)	1421
SmoI	CTYRAG	1 cut(s)	1421
SsiI	CCGC	8 cut(s)	108, 281, 411, 511, 779, 845, 1282, 1446
SspMI	CTAG	2 cut(s)	1239, 1328
SstI	GAGCTC	1 cut(s)	1223
StyD4I	CCNGG	4 cut(s)	276, 355, 593, 1167
StyI	CCWWGG	4 cut(s)	70, 700, 794, 914
TaaI	ACNGT	1 cut(s)	1132
TaiI	ACGT	1 cut(s)	654
TaqI	TCGA	7 cut(s)	173, 299, 310, 396, 539, 1251, 1377
TaqII	GACCGA	3 cut(s)	106, 184, 940
TfiI	GAWTC	4 cut(s)	113, 667, 1058, 1385
Tru1I	TTAA	3 cut(s)	636, 810, 1259
Tru9I	TTAA	3 cut(s)	636, 810, 1259
TscAI	CASTG	1 cut(s)	1233
TseI	GCWGC	7 cut(s)	590, 968, 1106, 1304, 1319, 1454, 1457
TspDTI	ATGAA	7 cut(s)	13, 17, 41, 233, 833, 876, 915
TspGWI	ACGGA	3 cut(s)	324, 433, 1028
TspRI	CASTG	1 cut(s)	1233
Tth111I	GACNNNGTC	1 cut(s)	437
VpaK11BI	GGWCC	1 cut(s)	118
VspI	ATTAAT	1 cut(s)	810
XagI	CCTNNNNNAGG	1 cut(s)	704
XapI	RAATTY	7 cut(s)	59, 169, 175, 181, 187, 261, 1247
XceI	RCATGY	1 cut(s)	452
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1151
XmnI	GAANNNNTTC	1 cut(s)	35
XspI	CTAG	2 cut(s)	1239, 1328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.