Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0011213

Physical Location & Seq

Genomic Coordinates Forward (+)

56086037 .. 56088603

Gene Structure 2567 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG412200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGGACGACATGAAAGACAAGGTCAAGGGCTTCATCAAGAACCCATTCTCGTCTTCTTCCTCCGGCAAATTCAAGGGCCAAGGCCGAGTCTTGGGCTCCTCCTCCGCCGGTCCCGCCAATTCTCCGATCCTCAACCGCCCCTCGCAGCCTCCCCAATCGAAGCCCAACCCCATTTCCACCTCAAAGTCTTCTTCGTCAACTTCCAAGCCTTCGCCTCAGAGAACACAGAGCCTCGATCAGAAGAGACCCGAATTGCCGACGGAACCAAAGCCCAACCGCAAACCGCAAGAGGGGTTTGATCCGTTCGACGCGTTAATCACTCCGGGGAAGAGATCTCAGAATGGGTTTACCTTGAACGTGTTTGATTGCCCCATTTGCGGCAAAGCTTTCAGGTCAGAAGACGAGGTGTCCATACATGTTGATAGCTGTGTGAATAATTCAGCTGACAATGAAAGTGCGGAGGGTGTTTCGGGGTCGGTGGAGACGTCTCGGAGTGGATTGGAGGCTTGCATTGGTACATTTGCTTCGGGCAATCCCGGTTCGGGGTCTGTTGAGATTGTGCTGAGGCTGTTGAGGAATGTAGTTAGGGAACCGGAGAATGTGAAGTTCAGGAAGGTTCGGATGAGTAATCCGAAGATTAGGGAGGCTATTGGTGAGGTTGTGGGAGGCATTGAGTTGCTGGAGTTTGTGGGGTTTGAATTGAAGGAAGAGGAGGGAGAGATGTGGGCAGTGATGGAGGTTCCTTCCGCGGAGCAGATTGGTGTAATGAAGAAGGGGATAGAATTGCTGGAACCGCCCAAGGTGCAAGAACCGCAGAAGAAAGAGAAGTTGACATCCGCTGGTTCGGGTGACTTGGATGAACAGATTGAACCAAAGAAGGTTGACAGACAGACCAGGGTCTTCTTTTCTGTCTCTGAAAGTGTAGCAGCAAAAATTGAGCTACCAGAAAGTTTCTATAGCCTCTCAGCTATGGAGCTGAAAAGAGAAGCTGAAGCGAGAAAGAAGAAGATTGACGATTCGCAGATGCTGATACCGAAGTCATATAGGGAAAAGCAGGCGAAAGCTGCTAAAAAGAGGTACACAAAAACTGTTATCCGGGTCCAGTTTCCTGACGGAGTGGTGCTCCAAGGTGTTTTTTCTCCTGCAGAGCCAACTAGTGCTCTCTATGAGTACGTCAGCTTAGCATTGAAAGAGCCTTGTTTGGAATTTGAGCTGTTGAATCCTGCAGCTATCAAGCGGCGGGTGATCCCCCACTCTCCTGCAGCAGGGGAGAGACCAGCAACACTAGCTGATGAGGACTTGGTCCCCTCGGCTCTTGTCAAGTTTAAACCTATTGAAACGGATTCCATTGTTTTCACGGGGCTATGCAATGAACTCCTTCAAATTAGTGAACCACTGGGAAGTGGTTCAGCTGTTGGTCATGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005769 GO:0005770 GO:0005773 GO:0005774 GO:0005829 GO:0006508 GO:0006807 GO:0006810 GO:0006914 GO:0006950 GO:0006952 GO:0007034 GO:0007041 GO:0008150 GO:0008152 GO:0008333 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010008 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0016192 GO:0016197 GO:0016236 GO:0019538 GO:0019898 GO:0030163 GO:0031090 GO:0031410 GO:0031901 GO:0031902 GO:0031982 GO:0032509 GO:0032510 GO:0032991 GO:0033554 GO:0034976 GO:0036503 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0061919 GO:0071704 GO:0071985 GO:0097708 GO:0098542 GO:0098588 GO:0098805 GO:0098852 GO:1901564 GO:1901565 GO:1901575 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

PUB UBX

Protein Analysis

475

Amino Acids

51.7

Weight (kDa)

6.89

Isoelectric Point (pI)

54.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB	PF09409	183 - 257	1e-17	PUB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011213)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01650 AT2G01650 AT2G01650
fragaria_vesca	FvH4_4g33820
malus_domestica	MD13G1029800.v1.1 MD16G1020600.v1.1
prunus_persica	Prupe.1G331600_v2.0.a1 Prupe.1G331600_v2.0.a1
pyrus_communis	pycom13g01820 pycom16g01850
rosa_chinensis	RchiOBHm_Chr4g0443331
rosa_laevigata	RLG00000005937
rosa_multiflora	Rmu_ssc0000122.1_g000008
rosa_roxburghii	Rroxscaffold_5G00383910
rosa_rugosa	Rorug04G0345500
rosa_samantha	Rh4AG400600 Rh4BG412200 Rh4CG427600 Rh4DG407600
rosa_wichuraiana	Rw4G034560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	488
AccII	CGCG	2 cut(s)	311, 749
AclWI	GGATC	3 cut(s)	121, 293, 1240
AcsI	RAATTY	2 cut(s)	68, 1205
AcuI	CTGAAG	1 cut(s)	1011
AcyI	GRCGYC	1 cut(s)	485
AfaI	GTAC	3 cut(s)	517, 1079, 1172
AfiI	CCNNNNNNNGG	6 cut(s)	91, 290, 377, 542, 543, 1265
AflIII	ACRYGT	3 cut(s)	309, 357, 415
AgsI	TTSAA	9 cut(s)	73, 355, 698, 703, 869, 1189, 1219, 1337, 1382
AhdI	GACNNNNNGTC	1 cut(s)	406
AhlI	ACTAGT	1 cut(s)	1154
AjnI	CCWGG	1 cut(s)	893
Alw21I	GWGCWC	2 cut(s)	1125, 1162
Alw26I	GTCTC	5 cut(s)	238, 476, 492, 916, 1267
AlwI	GGATC	3 cut(s)	121, 293, 1240
AlwNI	CAGNNNCTG	1 cut(s)	1027
AoxI	GGCC	2 cut(s)	76, 82
ApeKI	GCWGC	5 cut(s)	145, 926, 1064, 1226, 1262
ApoI	RAATTY	2 cut(s)	68, 1205
Asp700I	GAANNNNTTC	3 cut(s)	44, 1377, 1405
AspS9I	GGNCC	4 cut(s)	76, 110, 1099, 1303
AsuC2I	CCSGG	3 cut(s)	324, 537, 1097
AsuHPI	GGTGA	3 cut(s)	665, 860, 1255
AvaII	GGWCC	3 cut(s)	110, 1099, 1303
BaeI	ACNNNNGTAYC	2 cut(s)	1022, 1055
BanII	GRGCYC	1 cut(s)	98
BarI	GAAGNNNNNNTAC	2 cut(s)	508, 540
BbsI	GAAGAC	4 cut(s)	45, 180, 405, 892
Bbv12I	GWGCWC	2 cut(s)	1125, 1162
BbvCI	CCTCAGC	1 cut(s)	563
BbvI	GCAGC	5 cut(s)	157, 938, 1051, 1238, 1274
BccI	CCATC	1 cut(s)	727
BciT130I	CCWGG	1 cut(s)	895
BcnI	CCSGG	3 cut(s)	324, 537, 1097
BcoDI	GTCTC	5 cut(s)	238, 476, 492, 916, 1267
BcuI	ACTAGT	1 cut(s)	1154
BfaI	CTAG	2 cut(s)	1155, 1286
BfmI	CTRYAG	4 cut(s)	955, 1143, 1224, 1260
BglII	AGATCT	1 cut(s)	332
BisI	GCNGC	7 cut(s)	146, 379, 927, 1065, 1227, 1238, 1263
BlpI	GCTNAGC	1 cut(s)	1180
BlsI	GCNGC	7 cut(s)	147, 380, 928, 1066, 1228, 1239, 1264
Bme1390I	CCNGG	4 cut(s)	324, 537, 895, 1097
Bme18I	GGWCC	3 cut(s)	110, 1099, 1303
BmeRI	GACNNNNNGTC	1 cut(s)	406
BmgT120I	GGNCC	4 cut(s)	76, 110, 1099, 1303
BmiI	GGNNCC	8 cut(s)	97, 112, 264, 591, 741, 792, 1100, 1305
BmrFI	CCNGG	4 cut(s)	324, 537, 895, 1097
BmrI	ACTGGG	1 cut(s)	1406
BmsI	GCATC	1 cut(s)	1014
BmuI	ACTGGG	1 cut(s)	1406
BoxI	GACNNNNGTC	1 cut(s)	896
BpiI	GAAGAC	4 cut(s)	45, 180, 405, 892
BplI	GAGNNNNNCTC	2 cut(s)	1107, 1139
BpmI	CTGGAG	1 cut(s)	701
Bpu10I	CCTNAGC	1 cut(s)	563
Bpu1102I	GCTNAGC	1 cut(s)	1180
BpuMI	CCSGG	3 cut(s)	324, 537, 1097
BsaHI	GRCGYC	1 cut(s)	485
BsaI	GGTCTC	2 cut(s)	238, 1267
BsaJI	CCNNGG	7 cut(s)	79, 323, 747, 798, 894, 1126, 1308
BsaWI	WCCGGW	1 cut(s)	592
Bsc4I	CCNNNNNNNGG	6 cut(s)	91, 290, 377, 542, 543, 1265
Bse118I	RCCGGY	1 cut(s)	107
Bse1I	ACTGG	2 cut(s)	1102, 1401
Bse3DI	GCAATG	1 cut(s)	1375
BseBI	CCWGG	1 cut(s)	895
BseDI	CCNNGG	7 cut(s)	79, 323, 747, 798, 894, 1126, 1308
BseGI	GGATG	3 cut(s)	627, 833, 862
BseLI	CCNNNNNNNGG	6 cut(s)	91, 290, 377, 542, 543, 1265
BseMI	GCAATG	1 cut(s)	1375
BseMII	CTCAG	4 cut(s)	230, 350, 554, 978
BseNI	ACTGG	2 cut(s)	1102, 1401
BseRI	GAGGAG	3 cut(s)	88, 91, 725
BseXI	GCAGC	5 cut(s)	157, 938, 1051, 1238, 1274
Bsh1236I	CGCG	2 cut(s)	311, 749
BshFI	GGCC	2 cut(s)	78, 84
BsiHKAI	GWGCWC	2 cut(s)	1125, 1162
BsiSI	CCGG	6 cut(s)	63, 108, 323, 537, 593, 1096
BslFI	GGGAC	2 cut(s)	96, 1289
BslI	CCNNNNNNNGG	6 cut(s)	91, 290, 377, 542, 543, 1265
BsmAI	GTCTC	5 cut(s)	238, 476, 492, 916, 1267
BsmBI	CGTCTC	2 cut(s)	476, 492
BsmFI	GGGAC	2 cut(s)	96, 1289
BsnI	GGCC	2 cut(s)	78, 84
Bso31I	GGTCTC	2 cut(s)	238, 1267
Bsp1286I	GDGCHC	3 cut(s)	98, 1125, 1162
Bsp143I	GATC	5 cut(s)	126, 235, 298, 332, 1245
Bsp1720I	GCTNAGC	1 cut(s)	1180
BspANI	GGCC	2 cut(s)	78, 84
BspCNI	CTCAG	4 cut(s)	229, 349, 555, 977
BspFNI	CGCG	2 cut(s)	311, 749
BspLI	GGNNCC	8 cut(s)	97, 112, 264, 591, 741, 792, 1100, 1305
BspMAI	CTGCAG	3 cut(s)	1147, 1228, 1264
BspPI	GGATC	3 cut(s)	121, 293, 1240
BspTNI	GGTCTC	2 cut(s)	238, 1267
BsrDI	GCAATG	1 cut(s)	1375
BsrFI	RCCGGY	1 cut(s)	107
BsrI	ACTGG	2 cut(s)	1102, 1401
BssAI	RCCGGY	1 cut(s)	107
BssECI	CCNNGG	7 cut(s)	79, 323, 747, 798, 894, 1126, 1308
BssMI	GATC	5 cut(s)	126, 235, 298, 332, 1245
BssNI	GRCGYC	1 cut(s)	485
BssT1I	CCWWGG	3 cut(s)	79, 798, 1126
Bst2UI	CCWGG	1 cut(s)	895
Bst4CI	ACNGT	1 cut(s)	1090
Bst6I	CTCTTC	3 cut(s)	236, 323, 702
BstACI	GRCGYC	1 cut(s)	485
BstC8I	GCNNGC	2 cut(s)	508, 1056
BstDEI	CTNAG	5 cut(s)	216, 336, 563, 964, 1180
BstDSI	CCRYGG	1 cut(s)	747
BstENI	CCTNNNNNAGG	1 cut(s)	1263
BstF5I	GGATG	3 cut(s)	627, 833, 862
BstFNI	CGCG	2 cut(s)	311, 749
BstKTI	GATC	5 cut(s)	129, 238, 301, 335, 1248
BstMAI	GTCTC	5 cut(s)	238, 476, 492, 916, 1267
BstMBI	GATC	5 cut(s)	126, 235, 298, 332, 1245
BstMWI	GCNNNNNNNGC	7 cut(s)	113, 375, 793, 802, 811, 1064, 1286
BstNI	CCWGG	1 cut(s)	895
BstNSI	RCATGY	1 cut(s)	419
BstPAI	GACNNNNGTC	1 cut(s)	896
BstSCI	CCNGG	4 cut(s)	322, 535, 893, 1095
BstSFI	CTRYAG	4 cut(s)	955, 1143, 1224, 1260
BstUI	CGCG	2 cut(s)	311, 749
BstV1I	GCAGC	5 cut(s)	157, 938, 1051, 1238, 1274
BstV2I	GAAGAC	4 cut(s)	45, 180, 405, 892
BstX2I	RGATCY	1 cut(s)	332
BstYI	RGATCY	1 cut(s)	332
BsuRI	GGCC	2 cut(s)	78, 84
BtgI	CCRYGG	1 cut(s)	747
BtsCI	GGATG	3 cut(s)	627, 833, 862
BtsI	GCAGTG	1 cut(s)	735
BtsIMutI	CAGTG	2 cut(s)	735, 1394
Cac8I	GCNNGC	2 cut(s)	508, 1056
CaiI	CAGNNNCTG	1 cut(s)	1027
Cfr10I	RCCGGY	1 cut(s)	107
Cfr13I	GGNCC	4 cut(s)	76, 110, 1099, 1303
Cfr42I	CCGCGG	1 cut(s)	750
CseI	GACGC	1 cut(s)	317
Csp6I	GTAC	3 cut(s)	516, 1078, 1171
CviAII	CATG	3 cut(s)	10, 416, 1421
CviQI	GTAC	3 cut(s)	516, 1078, 1171
DdeI	CTNAG	5 cut(s)	216, 336, 563, 964, 1180
DpnI	GATC	5 cut(s)	128, 237, 300, 334, 1247
DpnII	GATC	5 cut(s)	126, 235, 298, 332, 1245
DraI	TTTAAA	1 cut(s)	1327
DriI	GACNNNNNGTC	1 cut(s)	406
Eam1104I	CTCTTC	3 cut(s)	236, 323, 702
Eam1105I	GACNNNNNGTC	1 cut(s)	406
EarI	CTCTTC	3 cut(s)	236, 323, 702
EciI	GGCGGA	1 cut(s)	94
Eco130I	CCWWGG	3 cut(s)	79, 798, 1126
Eco24I	GRGCYC	1 cut(s)	98
Eco31I	GGTCTC	2 cut(s)	238, 1267
Eco47I	GGWCC	3 cut(s)	110, 1099, 1303
Eco57I	CTGAAG	1 cut(s)	1011
EcoNI	CCTNNNNNAGG	1 cut(s)	1263
EcoRII	CCWGG	1 cut(s)	893
EcoT14I	CCWWGG	3 cut(s)	79, 798, 1126
EcoT22I	ATGCAT	1 cut(s)	1426
EcoT38I	GRGCYC	1 cut(s)	98
ErhI	CCWWGG	3 cut(s)	79, 798, 1126
Esp3I	CGTCTC	2 cut(s)	476, 492
FaeI	CATG	3 cut(s)	13, 419, 1424
FaqI	GGGAC	2 cut(s)	96, 1289
FatI	CATG	3 cut(s)	9, 415, 1420
FauI	CCCGC	2 cut(s)	121, 1233
Fnu4HI	GCNGC	7 cut(s)	146, 379, 927, 1065, 1227, 1238, 1263
FokI	GGATG	3 cut(s)	634, 820, 869
FriOI	GRGCYC	1 cut(s)	98
Fsp4HI	GCNGC	7 cut(s)	146, 379, 927, 1065, 1227, 1238, 1263
FspBI	CTAG	2 cut(s)	1155, 1286
GluI	GCNGC	7 cut(s)	146, 379, 927, 1065, 1227, 1238, 1263
GsuI	CTGGAG	1 cut(s)	701
HaeIII	GGCC	2 cut(s)	78, 84
HapII	CCGG	6 cut(s)	63, 108, 323, 537, 593, 1096
HgaI	GACGC	1 cut(s)	317
Hin1I	GRCGYC	1 cut(s)	485
Hin1II	CATG	3 cut(s)	13, 419, 1424
HincII	GTYRAC	3 cut(s)	198, 831, 883
HindII	GTYRAC	3 cut(s)	198, 831, 883
HindIII	AAGCTT	1 cut(s)	384
HinfI	GANTC	4 cut(s)	87, 1016, 1219, 1343
HpaII	CCGG	6 cut(s)	63, 108, 323, 537, 593, 1096
HphI	GGTGA	3 cut(s)	665, 860, 1255
Hpy166II	GTNNAC	6 cut(s)	198, 348, 831, 883, 1080, 1391
Hpy188I	TCNGA	9 cut(s)	126, 219, 240, 339, 397, 492, 621, 633, 916
Hpy188III	TCNNGA	3 cut(s)	37, 610, 1109
Hpy8I	GTNNAC	6 cut(s)	198, 348, 831, 883, 1080, 1391
Hpy99I	CGWCG	2 cut(s)	262, 311
HpyAV	CCTTC	7 cut(s)	219, 607, 697, 753, 766, 871, 1388
HpyCH4III	ACNGT	1 cut(s)	1090
HpyCH4IV	ACGT	3 cut(s)	357, 485, 1173
HpyCH4V	TGCA	7 cut(s)	510, 805, 1145, 1226, 1262, 1368, 1424
HpyF10VI	GCNNNNNNNGC	7 cut(s)	113, 375, 793, 802, 811, 1064, 1286
HpyF3I	CTNAG	5 cut(s)	216, 336, 563, 964, 1180
HpySE526I	ACGT	3 cut(s)	357, 485, 1173
Hsp92I	GRCGYC	1 cut(s)	485
Hsp92II	CATG	3 cut(s)	13, 419, 1424
KspI	CCGCGG	1 cut(s)	750
Kzo9I	GATC	5 cut(s)	126, 235, 298, 332, 1245
LmnI	GCTCC	4 cut(s)	101, 751, 973, 1128
Lsp1109I	GCAGC	5 cut(s)	157, 938, 1051, 1238, 1274
LweI	GCATC	1 cut(s)	1014
MaeI	CTAG	2 cut(s)	1155, 1286
MaeII	ACGT	3 cut(s)	357, 485, 1173
MaeIII	GTNAC	1 cut(s)	848
MalI	GATC	5 cut(s)	128, 237, 300, 334, 1247
MboI	GATC	5 cut(s)	126, 235, 298, 332, 1245
MflI	RGATCY	1 cut(s)	332
MhlI	GDGCHC	3 cut(s)	98, 1125, 1162
MluCI	AATT	9 cut(s)	68, 118, 251, 436, 698, 782, 933, 1205, 1383
MluI	ACGCGT	1 cut(s)	309
MlyI	GAGTC	1 cut(s)	96
Mph1103I	ATGCAT	1 cut(s)	1426
MroXI	GAANNNNTTC	3 cut(s)	44, 1377, 1405
MseI	TTAA	2 cut(s)	314, 1326
MspA1I	CMGCKG	4 cut(s)	443, 749, 839, 1412
MspI	CCGG	6 cut(s)	63, 108, 323, 537, 593, 1096
MspR9I	CCNGG	4 cut(s)	324, 537, 895, 1097
MssI	GTTTAAAC	1 cut(s)	1327
MvaI	CCWGG	1 cut(s)	895
MvnI	CGCG	2 cut(s)	311, 749
MwoI	GCNNNNNNNGC	7 cut(s)	113, 375, 793, 802, 811, 1064, 1286
NciI	CCSGG	3 cut(s)	324, 537, 1097
NdeII	GATC	5 cut(s)	126, 235, 298, 332, 1245
NlaIII	CATG	3 cut(s)	13, 419, 1424
NlaIV	GGNNCC	8 cut(s)	97, 112, 264, 591, 741, 792, 1100, 1305
NmeAIII	GCCGAG	2 cut(s)	110, 1289
NmuCI	GTSAC	1 cut(s)	848
NsiI	ATGCAT	1 cut(s)	1426
NspI	RCATGY	1 cut(s)	419
PciI	ACATGT	1 cut(s)	415
PcsI	WCGNNNNNNNCGW	1 cut(s)	482
PdmI	GAANNNNTTC	3 cut(s)	44, 1377, 1405
PfeI	GAWTC	3 cut(s)	1016, 1219, 1343
PflFI	GACNNNGTC	2 cut(s)	20, 1301
PkrI	GCNGC	7 cut(s)	147, 380, 928, 1066, 1228, 1239, 1264
PleI	GAGTC	1 cut(s)	95
PmeI	GTTTAAAC	1 cut(s)	1327
PpsI	GAGTC	1 cut(s)	95
PscI	ACATGT	1 cut(s)	415
PshAI	GACNNNNGTC	1 cut(s)	896
Psp6I	CCWGG	1 cut(s)	893
PspGI	CCWGG	1 cut(s)	893
PspN4I	GGNNCC	8 cut(s)	97, 112, 264, 591, 741, 792, 1100, 1305
PspPI	GGNCC	4 cut(s)	76, 110, 1099, 1303
PstI	CTGCAG	3 cut(s)	1147, 1228, 1264
PstNI	CAGNNNCTG	1 cut(s)	1027
PsuI	RGATCY	1 cut(s)	332
PsyI	GACNNNGTC	2 cut(s)	20, 1301
PvuII	CAGCTG	2 cut(s)	443, 1412
RsaI	GTAC	3 cut(s)	517, 1079, 1172
RsaNI	GTAC	3 cut(s)	516, 1078, 1171
SacII	CCGCGG	1 cut(s)	750
SaqAI	TTAA	2 cut(s)	314, 1326
SatI	GCNGC	7 cut(s)	146, 379, 927, 1065, 1227, 1238, 1263
Sau3AI	GATC	5 cut(s)	126, 235, 298, 332, 1245
Sau96I	GGNCC	4 cut(s)	76, 110, 1099, 1303
SchI	GAGTC	1 cut(s)	96
ScrFI	CCNGG	4 cut(s)	324, 537, 895, 1097
SduI	GDGCHC	3 cut(s)	98, 1125, 1162
SfaNI	GCATC	1 cut(s)	1014
SfcI	CTRYAG	4 cut(s)	955, 1143, 1224, 1260
Sfr303I	CCGCGG	1 cut(s)	750
SgrBI	CCGCGG	1 cut(s)	750
SinI	GGWCC	3 cut(s)	110, 1099, 1303
SpeI	ACTAGT	1 cut(s)	1154
Sse9I	AATT	9 cut(s)	68, 118, 251, 436, 698, 782, 933, 1205, 1383
SspMI	CTAG	2 cut(s)	1155, 1286
StyD4I	CCNGG	4 cut(s)	322, 535, 893, 1095
StyI	CCWWGG	3 cut(s)	79, 798, 1126
TaaI	ACNGT	1 cut(s)	1090
TaiI	ACGT	3 cut(s)	360, 488, 1176
TaqI	TCGA	3 cut(s)	158, 234, 306
TasI	AATT	9 cut(s)	68, 118, 251, 436, 698, 782, 933, 1205, 1383
TauI	GCSGC	2 cut(s)	381, 1240
TfiI	GAWTC	3 cut(s)	1016, 1219, 1343
Tru1I	TTAA	2 cut(s)	314, 1326
Tru9I	TTAA	2 cut(s)	314, 1326
TscAI	CASTG	2 cut(s)	735, 1401
TseFI	GTSAC	1 cut(s)	848
TseI	GCWGC	5 cut(s)	145, 926, 1064, 1226, 1262
Tsp45I	GTSAC	1 cut(s)	848
TspDTI	ATGAA	6 cut(s)	22, 26, 465, 782, 873, 1386
TspGWI	ACGGA	4 cut(s)	275, 291, 1128, 1355
TspRI	CASTG	2 cut(s)	735, 1401
Tth111I	GACNNNGTC	2 cut(s)	20, 1301
VpaK11BI	GGWCC	3 cut(s)	110, 1099, 1303
XagI	CCTNNNNNAGG	1 cut(s)	1263
XapI	RAATTY	2 cut(s)	68, 1205
XceI	RCATGY	1 cut(s)	419
XmnI	GAANNNNTTC	3 cut(s)	44, 1377, 1405
XspI	CTAG	2 cut(s)	1155, 1286
ZraI	GACGTC	1 cut(s)	486
Zsp2I	ATGCAT	1 cut(s)	1426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.