MD16G1065200.v1.1

Plant protein of unknown function (DUF863)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
4573897 .. 4580102
6206 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1065200.v1.1.491

Sequence Viewer

Length: 3090 bp
ATGCCCGGGTATTACTCAATGAGGGATCTTAATGAGGATCCAAACAATTTTAGCTGGCCCTTATATTACGGAGATAAAACCTTATCAAATAGGCAGTATTGCAATGGTTTCTTGCCGAGGGCCATGACTGATGCTTTTCCACGGTATGATAAGGATGTAGTCAAGCAGACCATGCTTGAGCACGAGGCCATATTTAAGGATCAGGTGATTGAACTTCACCGGCTGTACAGAATTCAAAGGGACTTGATGGATGAAATAAAACGGAAAGAACTACATAGAAACCATATACCCATGGAGACATCATTGTTGTCAAGTCCCTTAGCATCTCAAATTACATCTGAAGATGCTCGGAAATGGCATGATTCCAGCTTTCCTTTGGTAAACTCTGTTAATGCTGGACCATCGATTCCAGGTGTTGAAGGTACCCATTCTCCATCTAGTGCCGTGAAAGGAAACAACCAAAAAATTGGTTTGTTTCCATACCAAAATGGGATTAGTTCAAAAGTTGTTGAGGTGATGGAGTCAAGACCCACAAAAGTGAGGAAAAAAATGTTTGATCTTCAACTTCCAGCTGATGTGTACGTTGATTCTGATGAAGGGGAGCAGTTCACTGATGAGAAAGCTTCTGGCACTCCTACTTGTCAGCCGAATAAAAATTGTAAAACCACACTTGGGGGTGGTGCAAAGCTCTTTTTCTGCGAAGGTGCGAAGACAGATTGCAAAGGACATGTTTCAAGATCTGATACATGTTCGAGGAGCACAAATGGTTTGGCTGACTTGAATGAGCCTATTCAAATTGAAGAAACAAATGCTTCAGAATATGCTGATCCTCTGGGCCATGACTCTTATCATGGAAAGATTCAGGGTCCTGATCAGGCGGCTAATTCTAGGTTGCAGCTTTTAGGTTTGCCGAAGGAAATATCACTCAACCCTCATCATGTCAGTGATAAGGTTATCCCGAACAAGATATATTTGGAGAACGAAAGTGGAAAAGGGTGGTTTTCCCATGTTCTTGAAGCAGGGCAAAGTAAAAGCAGCCTTAAAACTGTTTCCCAATGTCTCCAAACAGAAAGGTTGCCGATATCGTCCCATCCAATGCAAAGGACAGTTTGTGGTGCGGAGAATTCGGATAGAAGTCATGAAATTTCCAATAATAAGCATCAGAATATTTTTGTGACTTCTCATATGCCCAGTCCATATCATCACATTCTTCCTTCCTCGGATGTGACCAGGTCATGGACTCACTCGGTTTCATCTTGGGAAAAGCCAGGCAGTGGCGTAAGCCAAAAGCCAATATCAGCTCTAACTCACCCGTGTTTTCCTTCATCTGCTACCTTGAGCAAGAGTTCCCAGTCATCAGTTCAGAGCAATGGGATCTTTGGAGATAGGTGGTATCTTAACAGCAATTCTAGTTCTAACCATGGTTCTGGAAGTGAAGTACCATACCAAAATGGTTTTCACCATGGTTCATCTTCAGGGTCTAAGGAACTAGTTCGCTTCTCATCTCTCAGCTGCGACTATCAGAGCAGCAGTAATGATCACAACGGAGGCCCTGAGCAGTTAAGGAGTCAGGGTTCAGCGACACACTACAAGGGTTCAAATTGCAAGGATGTGAAGTTTGCAAAGGAAGTAAACTTAAATGTAGTGCTTTCAAAAAGCTCATCGGATGAAGAAATGCCCCAGCAACGTCTTAGGATCGTAGGGGGGGAACAAAAGCATGAGGACCATCTTGCAGCTTTGCCGTGGCTAAGAGCCAAGCCTGCTTCTAAGAATGAATTTGCCAATGTAGGCAGAGTTTCAAAGACTGATATGCAGGATTTAAATCAAATTTTTGCTGAGGACATAAAATCAGTTCCTTGCGAGAATGATGTTGAGGCCAGAAGGACTGAACTAGGTGACAGCCCGTGCAAGAGAAAACTTCTTGGGTTTCCTATTTTTGTTCAGTCCCATAACACTAAGAACGAGTCTTATTCTGTTACCTCCCCGTCTGTGGAAAATAACAAGAGAAACGGAGGACTGGATATCAACTTGCCTTGCGATCCTTCAGCTCCTGACTTGGCCACAAAGAATGTAGAAGAAATTGTAGTTGTAGAAGAGAGAATAGATACGAAGGTTGCAAGTTTCAGACATGTCATCGATTTGAACTCGTGTGTCAGTGATGATGAAGAATCTTTGAAACCTTCTGCTCCAACCACCAGTGTGAAGATCACAGTACACATAGATTTGGAAGCCCCAATTGTACCCGGGGCTGATGATGGTGTCATTCTTGTGGAAGCATCTGCTGAAAAGCAGAAAGCAATGCCTTTAGCATCGCCACAACAGCCAGCTGAACCTCCTCAAGGGGAACTTGTGAGAGTAGCAGCGGAGGCAATAGTTGCCATCTCATCATCTGGTCCCTACAATCATACTGATGAATCCTCTTGCAGTCCACCGGAAGCTTCTTCAATCGATCCCCTTCTGTGGTTTGTGGAGATAGCTTCCACTTGTGGGAATGATCTTGAGAGCAAGTTTGACATCGTTGTGAGAGGCAAAGATGGTGATGATGATGATGAATCTTTATCAGACGCATTTGATTACTTTGAATTTGTGACTTTGAAACTGAGAGAGACCAAGGAAGAAGATTACATGCCTAAGCCTCTGGTTCCAGAAAACTTGAACCTGGAAGAAACCGGAAACACATTACTACCAAATCCTCCCAGAAGAGGCCAGTCAAGGAGAGGGAGGCAGCGGAGGGACTTCCAAAGGGATATCCTTCCCGGTCTTGCTTCCTTGTCAAGGCACGAGGTGACAGAAGATCTCCAGACATTTGGAGGATTAATGCGGGCAATGGGCCATTCATGGCAGACGGGACTAACCAGGAGAAACTCAACAAGAAACGGTTGTGGTAGGGGCAGGCGACGAGCAGTGGTGAATCCCTCTCCCCCTGTGGAAACTATCCCAGCTTGCAGTCCACTGGTACAGCAGCTTAATAATACAGAAATGGGACTGGAAGATAGAAGCCTAACCGGTTGGGGTAAGACGACCAGAAGGCCTCGTAGGCAAAGATGCGCGGCAGGTAATAATCTCCCATCATCCGTTCCTTTAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1030

Amino Acids

113.62

Weight (kDa)

6.03

Isoelectric Point (pI)

56.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF863 PF05904 132 - 369 3.7e-73 Plant protein of unknown function (DUF863)
DUF863 PF05904 367 - 1016 1.5e-242 Plant protein of unknown function (DUF863)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3044
Acc65I GGTACC 1 cut(s) 422
AccB1I GGYRCC 1 cut(s) 422
AccB7I CCANNNNNTGG 2 cut(s) 1236, 1274
AccII CGCG 1 cut(s) 3050
AciI CCGC 6 cut(s) 878, 1118, 2363, 2728, 2821, 3050
AclWI GGATC 9 cut(s) 32, 33, 45, 207, 821, 1382, 1703, 2033, 2444
AcoI YGGCCR 1 cut(s) 2058
AcsI RAATTY 6 cut(s) 231, 1123, 1143, 1775, 1827, 2582
AcuI CTGAAG 4 cut(s) 360, 798, 1458, 2028
AdeI CACNNNGTG 1 cut(s) 2785
AfaI GTAC 7 cut(s) 227, 424, 581, 1440, 2214, 2241, 2958
AfiI CCNNNNNNNGG 9 cut(s) 672, 1236, 1274, 1990, 2339, 2460, 2487, 2702, 2775
AflIII ACRYGT 3 cut(s) 727, 746, 2128
AgeI ACCGGT 1 cut(s) 3005
AhlI ACTAGT 1 cut(s) 1489
AjnI CCWGG 5 cut(s) 409, 1229, 1267, 2658, 2855
AjuI GAANNNNNNNTTGG 2 cut(s) 1440, 1472
AleI CACNNNNGTG 2 cut(s) 536, 2198
AloI GAACNNNNNNTCC 2 cut(s) 1558, 1590
Alw21I GWGCWC 2 cut(s) 183, 761
Alw26I GTCTC 3 cut(s) 290, 1064, 2600
AlwI GGATC 9 cut(s) 32, 33, 45, 207, 821, 1382, 1703, 2033, 2444
AlwNI CAGNNNCTG 1 cut(s) 2051
Ama87I CYCGRG 2 cut(s) 5, 2243
ApeKI GCWGC 8 cut(s) 895, 1035, 1512, 1527, 1733, 2360, 2725, 2962
ApoI RAATTY 6 cut(s) 231, 1123, 1143, 1775, 1827, 2582
AseI ATTAAT 1 cut(s) 2816
AsiGI ACCGGT 1 cut(s) 3005
Asp700I GAANNNNTTC 1 cut(s) 1491
Asp718I GGTACC 1 cut(s) 422
AspLEI GCGC 1 cut(s) 3050
AspS9I GGNCC 9 cut(s) 57, 120, 398, 835, 866, 1550, 1723, 2393, 2830
AsuC2I CCSGG 5 cut(s) 6, 7, 2244, 2245, 2757
AsuHPI GGTGA 9 cut(s) 209, 217, 526, 1301, 1451, 1907, 2549, 2797, 2920
AvaI CYCGRG 2 cut(s) 5, 2243
AvaII GGWCC 4 cut(s) 398, 866, 1723, 2393
BaeI ACNNNNGTAYC 2 cut(s) 2097, 2130
BalI TGGCCA 1 cut(s) 2060
BamHI GGATCC 1 cut(s) 37
BanI GGYRCC 1 cut(s) 422
BauI CACGAG 3 cut(s) 182, 2146, 2780
BbsI GAAGAC 1 cut(s) 716
Bbv12I GWGCWC 2 cut(s) 183, 761
BbvCI CCTCAGC 1 cut(s) 1836
BbvI GCAGC 8 cut(s) 907, 1047, 1499, 1539, 1745, 2372, 2737, 2974
BceAI ACGGC 2 cut(s) 428, 1726
BciT130I CCWGG 5 cut(s) 411, 1231, 1269, 2660, 2857
BclI TGATCA 2 cut(s) 871, 1537
BcnI CCSGG 5 cut(s) 6, 7, 2244, 2245, 2757
BcoDI GTCTC 3 cut(s) 290, 1064, 2600
BcuI ACTAGT 1 cut(s) 1489
BfaI CTAG 5 cut(s) 438, 888, 1410, 1490, 1892
BfuAI ACCTGC 1 cut(s) 3044
BglI GCCNNNNNGGC 1 cut(s) 3037
BglII AGATCT 2 cut(s) 737, 2794
Bme18I GGWCC 4 cut(s) 398, 866, 1723, 2393
BmeT110I CYCGRG 2 cut(s) 5, 2243
BmgT120I GGNCC 9 cut(s) 57, 120, 398, 835, 866, 1550, 1723, 2393, 2830
BmiI GGNNCC 5 cut(s) 39, 424, 867, 2395, 2643
BmrI ACTGGG 2 cut(s) 1185, 1345
BmsI GCATC 7 cut(s) 121, 332, 334, 1168, 2285, 2318, 3035
BmuI ACTGGG 2 cut(s) 1185, 1345
BpiI GAAGAC 1 cut(s) 716
BpmI CTGGAG 1 cut(s) 2783
Bpu10I CCTNAGC 4 cut(s) 319, 1554, 1836, 2631
BpuEI CTTGAG 4 cut(s) 197, 1357, 2322, 2519
BpuMI CCSGG 5 cut(s) 6, 7, 2244, 2245, 2757
Bsa29I ATCGAT 3 cut(s) 404, 2136, 2448
BsaBI GATNNNNATC 1 cut(s) 1821
BsaI GGTCTC 1 cut(s) 2600
BsaWI WCCGGW 3 cut(s) 2431, 2669, 3005
BsaXI ACNNNNNCTCC 4 cut(s) 415, 445, 1558, 1588
Bsc4I CCNNNNNNNGG 9 cut(s) 672, 1236, 1274, 1990, 2339, 2460, 2487, 2702, 2775
Bse118I RCCGGY 2 cut(s) 219, 3005
Bse1I ACTGG 7 cut(s) 1191, 1351, 2022, 2196, 2707, 2958, 2991
Bse3DI GCAATG 4 cut(s) 109, 1375, 2304, 2832
Bse8I GATNNNNATC 1 cut(s) 1821
BseBI CCWGG 5 cut(s) 411, 1231, 1269, 2660, 2857
BseCI ATCGAT 3 cut(s) 404, 2136, 2448
BseGI GGATG 7 cut(s) 160, 256, 1090, 1228, 1615, 1672, 3071
BseJI GATNNNNATC 1 cut(s) 1821
BseLI CCNNNNNNNGG 9 cut(s) 672, 1236, 1274, 1990, 2339, 2460, 2487, 2702, 2775
BseMI GCAATG 4 cut(s) 109, 1375, 2304, 2832
BseMII CTCAG 4 cut(s) 1522, 1545, 1827, 2591
BseNI ACTGG 7 cut(s) 1191, 1351, 2022, 2196, 2707, 2958, 2991
BseRI GAGGAG 2 cut(s) 769, 2325
BseXI GCAGC 8 cut(s) 907, 1047, 1499, 1539, 1745, 2372, 2737, 2974
BseYI CCCAGC 2 cut(s) 1680, 2938
Bsh1236I CGCG 1 cut(s) 3050
BshNI GGYRCC 1 cut(s) 422
BshTI ACCGGT 1 cut(s) 3005
BshVI ATCGAT 3 cut(s) 404, 2136, 2448
BsiHKAI GWGCWC 2 cut(s) 183, 761
BsiHKCI CYCGRG 2 cut(s) 5, 2243
BsiSI CCGG 7 cut(s) 6, 220, 2244, 2432, 2670, 2757, 3006
BslFI GGGAC 8 cut(s) 254, 300, 1072, 1930, 2379, 2747, 2862, 2997
BslI CCNNNNNNNGG 9 cut(s) 672, 1236, 1274, 1990, 2339, 2460, 2487, 2702, 2775
BsmAI GTCTC 3 cut(s) 290, 1064, 2600
BsmFI GGGAC 8 cut(s) 254, 300, 1072, 1930, 2379, 2747, 2862, 2997
Bso31I GGTCTC 1 cut(s) 2600
BsoBI CYCGRG 2 cut(s) 5, 2243
Bsp1286I GDGCHC 2 cut(s) 183, 761
Bsp1407I TGTACA 1 cut(s) 225
Bsp19I CCATGG 3 cut(s) 291, 1420, 1462
BspACI CCGC 6 cut(s) 878, 1118, 2363, 2728, 2821, 3050
BspCNI CTCAG 4 cut(s) 1521, 1546, 1828, 2592
BspDI ATCGAT 3 cut(s) 404, 2136, 2448
BspFNI CGCG 1 cut(s) 3050
BspHI TCATGA 1 cut(s) 1138
BspLI GGNNCC 5 cut(s) 39, 424, 867, 2395, 2643
BspMI ACCTGC 1 cut(s) 3044
BspPI GGATC 9 cut(s) 32, 33, 45, 207, 821, 1382, 1703, 2033, 2444
BspT107I GGYRCC 1 cut(s) 422
BspTNI GGTCTC 1 cut(s) 2600
BsrDI GCAATG 4 cut(s) 109, 1375, 2304, 2832
BsrFI RCCGGY 2 cut(s) 219, 3005
BsrGI TGTACA 1 cut(s) 225
BsrI ACTGG 7 cut(s) 1191, 1351, 2022, 2196, 2707, 2958, 2991
BssAI RCCGGY 2 cut(s) 219, 3005
BssSI CACGAG 3 cut(s) 182, 2146, 2780
BssT1I CCWWGG 4 cut(s) 291, 1420, 1462, 2610
Bst2BI CACGAG 3 cut(s) 182, 2146, 2780
Bst2UI CCWGG 5 cut(s) 411, 1231, 1269, 2660, 2857
Bst4CI ACNGT 5 cut(s) 144, 1048, 1108, 2212, 2879
Bst6I CTCTTC 2 cut(s) 2088, 2695
BstAPI GCANNNNNTGC 2 cut(s) 172, 2375
BstAUI TGTACA 1 cut(s) 225
BstC8I GCNNGC 6 cut(s) 56, 1761, 2325, 2823, 2894, 2944
BstDSI CCRYGG 5 cut(s) 140, 291, 1420, 1462, 1742
BstENI CCTNNNNNAGG 2 cut(s) 2337, 2773
BstF5I GGATG 7 cut(s) 160, 256, 1090, 1228, 1615, 1672, 3071
BstFNI CGCG 1 cut(s) 3050
BstHHI GCGC 1 cut(s) 3050
BstMAI GTCTC 3 cut(s) 290, 1064, 2600
BstMWI GCNNNNNNNGC 6 cut(s) 172, 1760, 2320, 2366, 2375, 3037
BstNI CCWGG 5 cut(s) 411, 1231, 1269, 2660, 2857
BstNSI RCATGY 4 cut(s) 731, 750, 2132, 2629
BstUI CGCG 1 cut(s) 3050
BstV1I GCAGC 8 cut(s) 907, 1047, 1499, 1539, 1745, 2372, 2737, 2974
BstV2I GAAGAC 1 cut(s) 716
BstX2I RGATCY 5 cut(s) 25, 37, 737, 1374, 2794
BstXI CCANNNNNNTGG 3 cut(s) 467, 1427, 2807
BstYI RGATCY 5 cut(s) 25, 37, 737, 1374, 2794
Bsu15I ATCGAT 3 cut(s) 404, 2136, 2448
BsuTUI ATCGAT 3 cut(s) 404, 2136, 2448
BtgI CCRYGG 5 cut(s) 140, 291, 1420, 1462, 1742
BtgZI GCGATG 1 cut(s) 2295
BtsCI GGATG 7 cut(s) 160, 256, 1090, 1228, 1615, 1672, 3071
BtsI GCAGTG 2 cut(s) 1279, 2910
BtsIMutI CAGTG 7 cut(s) 609, 949, 1279, 2161, 2203, 2910, 2951
BveI ACCTGC 1 cut(s) 3044
Cac8I GCNNGC 6 cut(s) 56, 1761, 2325, 2823, 2894, 2944
CaiI CAGNNNCTG 1 cut(s) 2051
CciI TCATGA 1 cut(s) 1138
CfoI GCGC 1 cut(s) 3050
Cfr10I RCCGGY 2 cut(s) 219, 3005
Cfr13I GGNCC 9 cut(s) 57, 120, 398, 835, 866, 1550, 1723, 2393, 2830
Cfr9I CCCGGG 2 cut(s) 5, 2243
ClaI ATCGAT 3 cut(s) 404, 2136, 2448
CseI GACGC 1 cut(s) 2573
CsiI ACCWGGT 1 cut(s) 1229
Csp6I GTAC 7 cut(s) 226, 423, 580, 1439, 2213, 2240, 2957
CspAI ACCGGT 1 cut(s) 3005
CviQI GTAC 7 cut(s) 226, 423, 580, 1439, 2213, 2240, 2957
DraI TTTAAA 1 cut(s) 1821
DraIII CACNNNGTG 1 cut(s) 2785
EaeI YGGCCR 1 cut(s) 2058
Eam1104I CTCTTC 2 cut(s) 2088, 2695
EarI CTCTTC 2 cut(s) 2088, 2695
Eco130I CCWWGG 4 cut(s) 291, 1420, 1462, 2610
Eco147I AGGCCT 1 cut(s) 3031
Eco31I GGTCTC 1 cut(s) 2600
Eco32I GATATC 3 cut(s) 1083, 2023, 2749
Eco47I GGWCC 4 cut(s) 398, 866, 1723, 2393
Eco57I CTGAAG 4 cut(s) 360, 798, 1458, 2028
Eco88I CYCGRG 2 cut(s) 5, 2243
EcoNI CCTNNNNNAGG 2 cut(s) 2337, 2773
EcoO109I RGGNCCY 2 cut(s) 866, 1550
EcoRI GAATTC 2 cut(s) 231, 1123
EcoRII CCWGG 5 cut(s) 409, 1229, 1267, 2658, 2855
EcoRV GATATC 3 cut(s) 1083, 2023, 2749
EcoT14I CCWWGG 4 cut(s) 291, 1420, 1462, 2610
ErhI CCWWGG 4 cut(s) 291, 1420, 1462, 2610
FalI AAGNNNNNCTT 2 cut(s) 2331, 2363
FaqI GGGAC 8 cut(s) 254, 300, 1072, 1930, 2379, 2747, 2862, 2997
FauI CCCGC 1 cut(s) 2814
FauNDI CATATG 1 cut(s) 1185
FbaI TGATCA 2 cut(s) 871, 1537
FokI GGATG 7 cut(s) 167, 263, 1077, 1235, 1622, 1679, 3058
FspBI CTAG 5 cut(s) 438, 888, 1410, 1490, 1892
GlaI GCGC 1 cut(s) 3049
GsaI CCCAGC 2 cut(s) 1684, 2942
GsuI CTGGAG 1 cut(s) 2783
HapII CCGG 7 cut(s) 6, 220, 2244, 2432, 2670, 2757, 3006
HgaI GACGC 1 cut(s) 2573
HhaI GCGC 1 cut(s) 3050
Hin6I GCGC 1 cut(s) 3048
HinP1I GCGC 1 cut(s) 3048
HindIII AAGCTT 2 cut(s) 621, 2436
HpaII CCGG 7 cut(s) 6, 220, 2244, 2432, 2670, 2757, 3006
HphI GGTGA 9 cut(s) 209, 217, 526, 1301, 1451, 1907, 2549, 2797, 2920
Hpy166II GTNNAC 7 cut(s) 382, 580, 609, 1633, 2215, 2429, 2951
Hpy8I GTNNAC 7 cut(s) 382, 580, 609, 1633, 2215, 2429, 2951
Hpy99I CGWCG 1 cut(s) 2901
HpyCH4III ACNGT 5 cut(s) 144, 1048, 1108, 2212, 2879
HpyCH4IV ACGT 2 cut(s) 582, 1687
HpyF10VI GCNNNNNNNGC 6 cut(s) 172, 1760, 2320, 2366, 2375, 3037
HpySE526I ACGT 2 cut(s) 582, 1687
HspAI GCGC 1 cut(s) 3048
KpnI GGTACC 1 cut(s) 426
Ksp22I TGATCA 2 cut(s) 871, 1537
LmnI GCTCC 4 cut(s) 601, 756, 2053, 2191
Lsp1109I GCAGC 8 cut(s) 907, 1047, 1499, 1539, 1745, 2372, 2737, 2974
LweI GCATC 7 cut(s) 121, 332, 334, 1168, 2285, 2318, 3035
MabI ACCWGGT 1 cut(s) 1229
MaeI CTAG 5 cut(s) 438, 888, 1410, 1490, 1892
MaeII ACGT 2 cut(s) 582, 1687
MaeIII GTNAC 6 cut(s) 1174, 1225, 1895, 1975, 2587, 2785
MfeI CAATTG 1 cut(s) 2235
MflI RGATCY 5 cut(s) 25, 37, 737, 1374, 2794
MhlI GDGCHC 2 cut(s) 183, 761
MlsI TGGCCA 1 cut(s) 2060
MluNI TGGCCA 1 cut(s) 2060
MlyI GAGTC 5 cut(s) 530, 836, 1234, 1576, 1973
MmeI TCCRAC 1 cut(s) 2213
Mox20I TGGCCA 1 cut(s) 2060
MroXI GAANNNNTTC 1 cut(s) 1491
MscI TGGCCA 1 cut(s) 2060
MslI CAYNNNNRTG 6 cut(s) 536, 942, 2198, 2267, 2409, 2519
Msp20I TGGCCA 1 cut(s) 2060
MspA1I CMGCKG 5 cut(s) 572, 1512, 2327, 2363, 2728
MspI CCGG 7 cut(s) 6, 220, 2244, 2432, 2670, 2757, 3006
MunI CAATTG 1 cut(s) 2235
MvaI CCWGG 5 cut(s) 411, 1231, 1269, 2660, 2857
MvnI CGCG 1 cut(s) 3050
MwoI GCNNNNNNNGC 6 cut(s) 172, 1760, 2320, 2366, 2375, 3037
NciI CCSGG 5 cut(s) 6, 7, 2244, 2245, 2757
NcoI CCATGG 3 cut(s) 291, 1420, 1462
NdeI CATATG 1 cut(s) 1185
NlaIV GGNNCC 5 cut(s) 39, 424, 867, 2395, 2643
NmeAIII GCCGAG 1 cut(s) 141
NmuCI GTSAC 5 cut(s) 1174, 1225, 1895, 2587, 2785
NspI RCATGY 4 cut(s) 731, 750, 2132, 2629
OliI CACNNNNGTG 2 cut(s) 536, 2198
PagI TCATGA 1 cut(s) 1138
PceI AGGCCT 1 cut(s) 3031
PciI ACATGT 3 cut(s) 727, 746, 2128
PdmI GAANNNNTTC 1 cut(s) 1491
PfeI GAWTC 8 cut(s) 362, 406, 587, 859, 2168, 2414, 2552, 2911
PflFI GACNNNGTC 1 cut(s) 1231
PflMI CCANNNNNTGG 2 cut(s) 1236, 1274
PinAI ACCGGT 1 cut(s) 3005
PleI GAGTC 5 cut(s) 529, 836, 1234, 1575, 1972
PpsI GAGTC 5 cut(s) 529, 836, 1234, 1575, 1972
PpuMI RGGWCCY 1 cut(s) 866
PscI ACATGT 3 cut(s) 727, 746, 2128
PshBI ATTAAT 1 cut(s) 2816
Psp5II RGGWCCY 1 cut(s) 866
Psp6I CCWGG 5 cut(s) 409, 1229, 1267, 2658, 2855
PspFI CCCAGC 2 cut(s) 1680, 2938
PspGI CCWGG 5 cut(s) 409, 1229, 1267, 2658, 2855
PspN4I GGNNCC 5 cut(s) 39, 424, 867, 2395, 2643
PspPI GGNCC 9 cut(s) 57, 120, 398, 835, 866, 1550, 1723, 2393, 2830
PspPPI RGGWCCY 1 cut(s) 866
PstNI CAGNNNCTG 1 cut(s) 2051
PsuI RGATCY 5 cut(s) 25, 37, 737, 1374, 2794
PsyI GACNNNGTC 1 cut(s) 1231
PvuII CAGCTG 3 cut(s) 572, 1512, 2327
RsaI GTAC 7 cut(s) 227, 424, 581, 1440, 2214, 2241, 2958
RsaNI GTAC 7 cut(s) 226, 423, 580, 1439, 2213, 2240, 2957
RseI CAYNNNNRTG 6 cut(s) 536, 942, 2198, 2267, 2409, 2519
Sau96I GGNCC 9 cut(s) 57, 120, 398, 835, 866, 1550, 1723, 2393, 2830
SchI GAGTC 5 cut(s) 530, 836, 1234, 1576, 1973
SduI GDGCHC 2 cut(s) 183, 761
SexAI ACCWGGT 1 cut(s) 1229
SfaNI GCATC 7 cut(s) 121, 332, 334, 1168, 2285, 2318, 3035
SinI GGWCC 4 cut(s) 398, 866, 1723, 2393
SmaI CCCGGG 2 cut(s) 7, 2245
SmiI ATTTAAAT 1 cut(s) 1821
SmiMI CAYNNNNRTG 6 cut(s) 536, 942, 2198, 2267, 2409, 2519
SmlI CTYRAG 4 cut(s) 176, 1336, 2337, 2498
SmoI CTYRAG 4 cut(s) 176, 1336, 2337, 2498
SpeI ACTAGT 1 cut(s) 1489
SseBI AGGCCT 1 cut(s) 3031
SsiI CCGC 6 cut(s) 878, 1118, 2363, 2728, 2821, 3050
SspI AATATT 1 cut(s) 1168
SspMI CTAG 5 cut(s) 438, 888, 1410, 1490, 1892
StuI AGGCCT 1 cut(s) 3031
StyI CCWWGG 4 cut(s) 291, 1420, 1462, 2610
SwaI ATTTAAAT 1 cut(s) 1821
TaaI ACNGT 5 cut(s) 144, 1048, 1108, 2212, 2879
TaiI ACGT 2 cut(s) 585, 1690
TaqI TCGA 4 cut(s) 404, 752, 2136, 2448
TatI WGTACW 2 cut(s) 225, 2212
TauI GCSGC 2 cut(s) 881, 3053
TfiI GAWTC 8 cut(s) 362, 406, 587, 859, 2168, 2414, 2552, 2911
TscAI CASTG 7 cut(s) 616, 949, 1279, 2161, 2203, 2910, 2958
TseFI GTSAC 5 cut(s) 1174, 1225, 1895, 2587, 2785
TseI GCWGC 8 cut(s) 895, 1035, 1512, 1527, 1733, 2360, 2725, 2962
Tsp45I GTSAC 5 cut(s) 1174, 1225, 1895, 2587, 2785
TspGWI ACGGA 5 cut(s) 84, 277, 1560, 2025, 3064
TspMI CCCGGG 2 cut(s) 5, 2243
TspRI CASTG 7 cut(s) 616, 949, 1279, 2161, 2203, 2910, 2958
Tth111I GACNNNGTC 1 cut(s) 1231
Van91I CCANNNNNTGG 2 cut(s) 1236, 1274
VpaK11BI GGWCC 4 cut(s) 398, 866, 1723, 2393
VspI ATTAAT 1 cut(s) 2816
XagI CCTNNNNNAGG 2 cut(s) 2337, 2773
XapI RAATTY 6 cut(s) 231, 1123, 1143, 1775, 1827, 2582
XceI RCATGY 4 cut(s) 731, 750, 2132, 2629
XcmI CCANNNNNNNNNTGG 1 cut(s) 373
XmaI CCCGGG 2 cut(s) 5, 2243
XmnI GAANNNNTTC 1 cut(s) 1491
XspI CTAG 5 cut(s) 438, 888, 1410, 1490, 1892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.