Rh4BG376000

Plant protein of unknown function (DUF863)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0007903
Physical Location & Seq
Reverse (-)
53164872 .. 53171079
6208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG376000.1

Sequence Viewer

Length: 3123 bp
ATGTTTGTTCAAGATGCTTGCAGTATAAGCCGATTCGGGTCAATATTTAAGGACCTTAATTGGCATAGGCAGATTGATTTCAGCATTCTTTGCTCATTTTTATTTCTACTCCATAAGACACTTGAACGGTTTCAATTTCATGTGATCCAGGTGTATGAACTTCACCGCCTGTACAGAATACAAAGGGACTTGATGGATGAAATCAAAAGAAAAGAACTGCATAGAAACCATATGCCCATGGAGGCATCATTATCCTCAAGTCCCTTAGCATCTCAAATTACTTCTGAACATACTCGGAAATGGCCTGATTCCAGCTTCCCTTTGGTGAACTCGGTTTATGCGGGACCATCAAGTTCAGGTGTTGAAGGCATTCATTCTCAATCTAGTGCTATTAAAGGGAACGGGCCAAAAAATGGTCTATATCCGTGTCAAAATGGTATAAGTTCAAAAGATGTTGAGGTGTTGGATTCAAGACCTACAAAAGTGAGGAAAAAAATGTTTGACCTTCAACTTCCAGCTGATGTGTACATAGATTCTGAAGAAGGGGAAGAGTGCAGTGACGAGAAAGTTTCTTGCATGCCTAGTTGTCTGTCAACTAAAAATTGTAAAATCGCACCTGAGGGTGGTGGGAAGGTCTTTTTGGGTGATGGCGGGAAGTCTGACTTTGCAGGGGATGCGTTGAGATCAGAGAGATGTCCAAGGGGTGCAAATGGTTTTGCTGACTTGAATGAGCCCATTCAACCTGAAGAAGCAAGTGCTTCAGGATATAATGATCCTCCGGGCCATGACTCTTTTCGGGGGAAGATTCAAGGCCCTGATCTGCCTGCTAAGTCAAGGTCACAGCTTCTGGGTGATGGAGCAAAAAATGGGTGGTTTTCCCATGTTCTTGAATCAGGGCCAAATAAAAGCAACCTCAAAACTGTGTCCCAGTGTCCGCAAACGGAAAGGTTGCCTATATCATCCCAGCCAGTCCAAGTTTCTGTGAACAATGTTCATGAACAAAATTTCTATTTGACGGATAAAAGCAAGGTGAATTTGTGGAGAGAGAGGACAATTTCTGGTGTTGAGAGTTCCGAAAGAAGTAACGAGTTTTCCAGTAACAAGCACCCGAGTACCTTTGTGGCATCTAATGTGCCCAGTCCTTATCCGATTCTTCCTTCTTCTGATTTGGCCAAGTCCTGGACTCACTCGGTTTCTTCTTGGGAAAAGCCAGGCAGTAGCTTAAGCCAGAAGTCAATGTCAGTTCAAGCTCACCCATGTTTTAATTCATCTGCTACCTTGAGTAAGAGTTCCCAGTCATCGGTTCAGAGTAATGGGATTTTCGGAGACAGGTGGAATCTCAACAACAATTCTAGATCTAACCAAGGTTCAGGAAGTGAATTGCCGTACCAAAATGGGTTTCATCATGGTTCTTCTTCTGGGTCTAAGGAGCAACTGGTCCGCTTTCCTTCTCTCAACTGTGACTATCAGAGCAGCAGTAGCAATCATAATGGAGGTTCTGAACACTTGATGAGTCATGGTTCAGCAACGTACTACAAGGGTTCAAATTTCTTGGATGTGAAGTCTGCAAAGGAAGTAAACTTGAACGTGATGCTTTCAAACAGTTCATCTAATGAAGAATTACCCCAGCGAGGTCTTAAGATCATGGGTGGAGAACAAAAGCATGAGGACCCTCTTGCAGCTTTGCCGTGGCTAAGAGCTAAGCCTGCTGGTAAGAACGAGTTTGCCAATGGTGGCGGAGTTTCTAAGACCGGTGAGCCTAGTATCTTTCAGTCTTCTGTGAATAATTTATCCAATAAAATTGAAGCTGGAAAGGGTTTCAATCAAATTTTTACTCAGAGTATAAAATCATTTTCATGCGGGAATGATGTTGAGGCGAGGAGGACTGAACTAGCTGATAGCCCGAGTAATAAAAAACTTCTTGGATTTCCTATTTTTGAGAAGTCTCAGCTTTTGAAGAATGAGTCCTTTTCTCTCACCTCCCCTTCTGTGTCTATTCCTCACCCATCGGAGAGTGAAGTGGAAAATAACAGAAGAAATAGATTGCTGGACATCAACTTGCCTTGTGATACTGCAGCTCCTGACTTGGCCAGAAAGAGCGTAGCAGAAATTGTAGTGGTAGAAGACAGAAGGGATAAACAGTTTGGTAATTTCAGACATCACATTGACCTGAACTTCTGTATCAGCGATGATGAAGCATCTTTGAAACCTTCTGCTCCAAGAGGCAGTTTGAAGATTGCAGTGGAGATAGATTTGGAAGCCCCCATTTCTCCGGAGACTGATGATGAGGATGATGTCATTCATGGGGAAGCATCTGCACAAAAGCAGAACAAGATGTCTTTAGCATTACCACAGAAAAAAACTGAACCTTCTGGAGATGAGCTTGCAAGAGTAGCAGCAGAGGCAATTGTTGCCATTTCATCATGCGGTCCTCCTGATCCTATGGATGAATCCTCTTGCAAACTAGCAGAAGCATCTTCAGTTGACCCTCTTATGTGGTTTGTGGACGTAGTTTCTACATGTGGGAATGATCTTGAGAACAAGTTTGACACTGTTCTCAGGAGTGACGATAGTGAAGGTATTGAAGAATCTTTAGTAGAAGAGTTTGATTACTTTGAATTCCTCACTTTGAAACTGAAGGAAACCAAGGAAGAAGATTACATGCCCAAGCCTTTGGTTCCGGAAAATATAAAGTTTGAAGAGTCAGGAACCAATTTACTATCAAATACGCCCCGAAGGGGCCAGTCAAGGAGAGGGAGGCAGCGGCGGGACTTCCAAAGGGATATCCTTCCCGGCCTTGTTTCTTTGTCAAGGCATGAGGTAACAGAAGATATCCAGACATTTGGAGGGTTGATGCGGGCAACAGGTCATCCTTCGTGGCAATCGGGGTTGGCAAGAAGGAACTCAACAAGAAATGGTTGTGCTAGGGGCAGGCGACGAGCAGTGGCGAGTCCCTCACCCCCTATGATCACCATCCCGGTTTGCACTCCACCGATACAGCAGTTTAGTAATACCGAAATGGCACTGGAAGATAGAAGCCTAACAGGTTGGGGTAAGACTACTAGAAGGCCCCGTAGGCAAAGATGCGCGGCAGGTAATCTTCCCTCTCTTCCTTTAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF863

Protein Analysis

1040

Amino Acids

114.56

Weight (kDa)

6.27

Isoelectric Point (pI)

59.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF863 PF05904 113 - 1029 0.0 Plant protein of unknown function (DUF863)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3083
AccB7I CCANNNNNTGG 2 cut(s) 413, 1179
AccII CGCG 1 cut(s) 3089
AccIII TCCGGA 2 cut(s) 2272, 2680
AclWI GGATC 3 cut(s) 139, 767, 2432
AcoI YGGCCR 2 cut(s) 1170, 2088
AcsI RAATTY 5 cut(s) 1003, 1033, 1546, 1827, 2618
AcuI CTGAAG 5 cut(s) 558, 744, 765, 2463, 2657
AfaI GTAC 5 cut(s) 173, 527, 1114, 1388, 1532
AfiI CCNNNNNNNGG 6 cut(s) 413, 623, 1179, 1300, 1631, 2738
AflII CTTAAG 2 cut(s) 1222, 1637
AflIII ACRYGT 1 cut(s) 2519
AgeI ACCGGT 1 cut(s) 1751
AjnI CCWGG 3 cut(s) 147, 1178, 1210
AjuI GAANNNNNNNTTGG 4 cut(s) 623, 655, 1383, 1415
Alw26I GTCTC 3 cut(s) 1320, 1950, 2270
AlwI GGATC 3 cut(s) 139, 767, 2432
AlwNI CAGNNNCTG 2 cut(s) 847, 2081
Ama87I CYCGRG 2 cut(s) 1108, 1903
Aor13HI TCCGGA 2 cut(s) 2272, 2680
ApeKI GCWGC 5 cut(s) 1473, 1679, 2075, 2396, 2761
ApoI RAATTY 5 cut(s) 1003, 1033, 1546, 1827, 2618
AsiGI ACCGGT 1 cut(s) 1751
Asp700I GAANNNNTTC 2 cut(s) 129, 369
AspLEI GCGC 1 cut(s) 3089
AsuC2I CCSGG 3 cut(s) 780, 2793, 2978
AvaI CYCGRG 2 cut(s) 1108, 1903
AvaII GGWCC 5 cut(s) 52, 344, 1438, 1669, 2429
AxyI CCTNAGG 1 cut(s) 618
BaeGI GKGCMC 1 cut(s) 1137
BaeI ACNNNNGTAYC 6 cut(s) 1096, 1129, 2164, 2197, 2987, 3020
BalI TGGCCA 2 cut(s) 1172, 2090
BanII GRGCYC 1 cut(s) 735
BbsI GAAGAC 2 cut(s) 1767, 2130
BbvI GCAGC 5 cut(s) 1485, 1691, 2087, 2408, 2773
BccI CCATC 6 cut(s) 187, 355, 641, 848, 2014, 2981
BceAI ACGGC 2 cut(s) 1369, 1672
BciT130I CCWGG 3 cut(s) 149, 1180, 1212
BclI TGATCA 1 cut(s) 2967
BcnI CCSGG 3 cut(s) 780, 2793, 2978
BcoDI GTCTC 3 cut(s) 1320, 1950, 2270
BfaI CTAG 8 cut(s) 384, 582, 1353, 1761, 1892, 2465, 2925, 3063
BfmI CTRYAG 1 cut(s) 2073
BfrI CTTAAG 2 cut(s) 1222, 1637
BfuAI ACCTGC 1 cut(s) 3083
BglI GCCNNNNNGGC 1 cut(s) 3076
BglII AGATCT 1 cut(s) 1355
BisI GCNGC 7 cut(s) 1474, 1680, 2076, 2397, 2762, 2765, 3090
BlpI GCTNAGC 1 cut(s) 1701
BlsI GCNGC 7 cut(s) 1475, 1681, 2077, 2398, 2763, 2766, 3091
Bme1390I CCNGG 6 cut(s) 149, 780, 1180, 1212, 2793, 2978
Bme18I GGWCC 5 cut(s) 52, 344, 1438, 1669, 2429
BmeT110I CYCGRG 2 cut(s) 1108, 1903
BmiI GGNNCC 6 cut(s) 345, 1671, 2679, 2710, 2741, 3071
BmrFI CCNGG 6 cut(s) 149, 780, 1180, 1212, 2793, 2978
BmrI ACTGGG 3 cut(s) 922, 1131, 1288
BmuI ACTGGG 3 cut(s) 922, 1131, 1288
BpiI GAAGAC 2 cut(s) 1767, 2130
BpmI CTGGAG 1 cut(s) 2394
Bpu10I CCTNAGC 1 cut(s) 265
Bpu1102I GCTNAGC 1 cut(s) 1701
BpuEI CTTGAG 3 cut(s) 241, 1300, 2555
BpuMI CCSGG 3 cut(s) 780, 2793, 2978
BsaBI GATNNNNATC 1 cut(s) 2972
BsaJI CCNNGG 5 cut(s) 237, 698, 1363, 1688, 2646
BsaWI WCCGGW 3 cut(s) 1751, 2272, 2680
BsaXI ACNNNNNCTCC 2 cut(s) 2062, 2092
Bsc4I CCNNNNNNNGG 6 cut(s) 413, 623, 1179, 1300, 1631, 2738
Bse118I RCCGGY 1 cut(s) 1751
Bse1I ACTGG 8 cut(s) 928, 968, 1095, 1137, 1294, 1440, 2743, 3030
Bse21I CCTNAGG 1 cut(s) 618
Bse8I GATNNNNATC 1 cut(s) 2972
BseAI TCCGGA 2 cut(s) 2272, 2680
BseBI CCWGG 3 cut(s) 149, 1180, 1212
BseDI CCNNGG 5 cut(s) 237, 698, 1363, 1688, 2646
BseGI GGATG 8 cut(s) 202, 679, 959, 1561, 2296, 2452, 2869, 2973
BseJI GATNNNNATC 1 cut(s) 2972
BseLI CCNNNNNNNGG 6 cut(s) 413, 623, 1179, 1300, 1631, 2738
BseMII CTCAG 4 cut(s) 609, 1850, 1961, 2572
BseNI ACTGG 8 cut(s) 928, 968, 1095, 1137, 1294, 1440, 2743, 3030
BseRI GAGGAG 1 cut(s) 1894
BseSI GKGCMC 1 cut(s) 1137
BseXI GCAGC 5 cut(s) 1485, 1691, 2087, 2408, 2773
BseYI CCCAGC 2 cut(s) 963, 1626
BsgI GTGCAG 2 cut(s) 574, 2301
Bsh1236I CGCG 1 cut(s) 3089
BshTI ACCGGT 1 cut(s) 1751
BsiHKCI CYCGRG 2 cut(s) 1108, 1903
BsiSI CCGG 6 cut(s) 779, 1752, 2273, 2681, 2793, 2978
BslFI GGGAC 6 cut(s) 200, 246, 357, 910, 2783, 2937
BslI CCNNNNNNNGG 6 cut(s) 413, 623, 1179, 1300, 1631, 2738
BsmAI GTCTC 3 cut(s) 1320, 1950, 2270
BsmFI GGGAC 6 cut(s) 200, 246, 357, 910, 2783, 2937
BsmI GAATGC 2 cut(s) 84, 369
BsoBI CYCGRG 2 cut(s) 1108, 1903
Bsp1286I GDGCHC 2 cut(s) 735, 1137
Bsp13I TCCGGA 2 cut(s) 2272, 2680
Bsp1407I TGTACA 2 cut(s) 171, 525
Bsp143I GATC 9 cut(s) 144, 683, 772, 817, 1355, 1641, 2437, 2530, 2967
Bsp1720I GCTNAGC 1 cut(s) 1701
Bsp19I CCATGG 1 cut(s) 237
BspCNI CTCAG 4 cut(s) 610, 1849, 1960, 2571
BspEI TCCGGA 2 cut(s) 2272, 2680
BspFNI CGCG 1 cut(s) 3089
BspHI TCATGA 1 cut(s) 994
BspLI GGNNCC 6 cut(s) 345, 1671, 2679, 2710, 2741, 3071
BspMAI CTGCAG 1 cut(s) 2077
BspMI ACCTGC 1 cut(s) 3083
BspPI GGATC 3 cut(s) 139, 767, 2432
BspTI CTTAAG 2 cut(s) 1222, 1637
BsrFI RCCGGY 1 cut(s) 1751
BsrGI TGTACA 2 cut(s) 171, 525
BsrI ACTGG 8 cut(s) 928, 968, 1095, 1137, 1294, 1440, 2743, 3030
BssAI RCCGGY 1 cut(s) 1751
BssECI CCNNGG 5 cut(s) 237, 698, 1363, 1688, 2646
BssMI GATC 9 cut(s) 144, 683, 772, 817, 1355, 1641, 2437, 2530, 2967
BssT1I CCWWGG 4 cut(s) 237, 698, 1363, 2646
Bst2UI CCWGG 3 cut(s) 149, 1180, 1212
Bst4CI ACNGT 6 cut(s) 129, 922, 1460, 1604, 2142, 2554
Bst6I CTCTTC 4 cut(s) 543, 2595, 2694, 3114
BstAFI CTTAAG 2 cut(s) 1222, 1637
BstAPI GCANNNNNTGC 3 cut(s) 90, 674, 2411
BstAUI TGTACA 2 cut(s) 171, 525
BstC8I GCNNGC 7 cut(s) 19, 578, 825, 1707, 2385, 2859, 2933
BstDSI CCRYGG 2 cut(s) 237, 1688
BstF5I GGATG 8 cut(s) 202, 679, 959, 1561, 2296, 2452, 2869, 2973
BstFNI CGCG 1 cut(s) 3089
BstHHI GCGC 1 cut(s) 3089
BstKTI GATC 9 cut(s) 147, 686, 775, 820, 1358, 1644, 2440, 2533, 2970
BstMAI GTCTC 3 cut(s) 1320, 1950, 2270
BstMBI GATC 9 cut(s) 144, 683, 772, 817, 1355, 1641, 2437, 2530, 2967
BstMWI GCNNNNNNNGC 9 cut(s) 27, 90, 674, 1479, 1706, 2393, 2402, 2411, 3076
BstNI CCWGG 3 cut(s) 149, 1180, 1212
BstNSI RCATGY 3 cut(s) 580, 2523, 2665
BstSCI CCNGG 6 cut(s) 147, 778, 1178, 1210, 2791, 2976
BstSFI CTRYAG 1 cut(s) 2073
BstSLI GKGCMC 1 cut(s) 1137
BstUI CGCG 1 cut(s) 3089
BstV1I GCAGC 5 cut(s) 1485, 1691, 2087, 2408, 2773
BstV2I GAAGAC 2 cut(s) 1767, 2130
BstX2I RGATCY 1 cut(s) 1355
BstXI CCANNNNNNTGG 2 cut(s) 2674, 2843
BstYI RGATCY 1 cut(s) 1355
Bsu36I CCTNAGG 1 cut(s) 618
BtgI CCRYGG 2 cut(s) 237, 1688
BtgZI GCGATG 1 cut(s) 2202
BtsCI GGATG 8 cut(s) 202, 679, 959, 1561, 2296, 2452, 2869, 2973
BtsI GCAGTG 3 cut(s) 562, 2247, 2949
BtsIMutI CAGTG 6 cut(s) 562, 935, 2247, 2550, 2949, 3023
BveI ACCTGC 1 cut(s) 3083
Cac8I GCNNGC 7 cut(s) 19, 578, 825, 1707, 2385, 2859, 2933
CaiI CAGNNNCTG 2 cut(s) 847, 2081
CciI TCATGA 1 cut(s) 994
CfoI GCGC 1 cut(s) 3089
Cfr10I RCCGGY 1 cut(s) 1751
Csp6I GTAC 5 cut(s) 172, 526, 1113, 1387, 1531
CspAI ACCGGT 1 cut(s) 1751
CviQI GTAC 5 cut(s) 172, 526, 1113, 1387, 1531
DpnI GATC 9 cut(s) 146, 685, 774, 819, 1357, 1643, 2439, 2532, 2969
DpnII GATC 9 cut(s) 144, 683, 772, 817, 1355, 1641, 2437, 2530, 2967
EaeI YGGCCR 2 cut(s) 1170, 2088
Eam1104I CTCTTC 4 cut(s) 543, 2595, 2694, 3114
EarI CTCTTC 4 cut(s) 543, 2595, 2694, 3114
EciI GGCGGA 1 cut(s) 1752
Eco130I CCWWGG 4 cut(s) 237, 698, 1363, 2646
Eco24I GRGCYC 1 cut(s) 735
Eco32I GATATC 2 cut(s) 2785, 2833
Eco47I GGWCC 5 cut(s) 52, 344, 1438, 1669, 2429
Eco57I CTGAAG 5 cut(s) 558, 744, 765, 2463, 2657
Eco81I CCTNAGG 1 cut(s) 618
Eco88I CYCGRG 2 cut(s) 1108, 1903
EcoO109I RGGNCCY 4 cut(s) 52, 812, 1669, 3069
EcoRI GAATTC 1 cut(s) 2618
EcoRII CCWGG 3 cut(s) 147, 1178, 1210
EcoRV GATATC 2 cut(s) 2785, 2833
EcoT14I CCWWGG 4 cut(s) 237, 698, 1363, 2646
EcoT38I GRGCYC 1 cut(s) 735
ErhI CCWWGG 4 cut(s) 237, 698, 1363, 2646
FalI AAGNNNNNCTT 2 cut(s) 647, 679
FaqI GGGAC 6 cut(s) 200, 246, 357, 910, 2783, 2937
FauI CCCGC 5 cut(s) 334, 644, 1853, 2760, 2850
FauNDI CATATG 1 cut(s) 231
FbaI TGATCA 1 cut(s) 2967
Fnu4HI GCNGC 7 cut(s) 1474, 1680, 2076, 2397, 2762, 2765, 3090
FokI GGATG 8 cut(s) 209, 686, 946, 1568, 2303, 2459, 2856, 2960
FriOI GRGCYC 1 cut(s) 735
Fsp4HI GCNGC 7 cut(s) 1474, 1680, 2076, 2397, 2762, 2765, 3090
FspBI CTAG 8 cut(s) 384, 582, 1353, 1761, 1892, 2465, 2925, 3063
GlaI GCGC 1 cut(s) 3088
GluI GCNGC 7 cut(s) 1474, 1680, 2076, 2397, 2762, 2765, 3090
GsaI CCCAGC 2 cut(s) 967, 1630
GsuI CTGGAG 1 cut(s) 2394
HapII CCGG 6 cut(s) 779, 1752, 2273, 2681, 2793, 2978
HhaI GCGC 1 cut(s) 3089
Hin6I GCGC 1 cut(s) 3087
HinP1I GCGC 1 cut(s) 3087
HincII GTYRAC 2 cut(s) 594, 2485
HindII GTYRAC 2 cut(s) 594, 2485
HpaII CCGG 6 cut(s) 779, 1752, 2273, 2681, 2793, 2978
Hpy166II GTNNAC 7 cut(s) 328, 526, 594, 985, 1579, 2485, 2506
Hpy8I GTNNAC 7 cut(s) 328, 526, 594, 985, 1579, 2485, 2506
Hpy99I CGWCG 1 cut(s) 2940
HpyCH4III ACNGT 6 cut(s) 129, 922, 1460, 1604, 2142, 2554
HpyCH4IV ACGT 3 cut(s) 1529, 1587, 2508
HpyF10VI GCNNNNNNNGC 9 cut(s) 27, 90, 674, 1479, 1706, 2393, 2402, 2411, 3076
HpySE526I ACGT 3 cut(s) 1529, 1587, 2508
HspAI GCGC 1 cut(s) 3087
Kpn2I TCCGGA 2 cut(s) 2272, 2680
Ksp22I TGATCA 1 cut(s) 2967
Kzo9I GATC 9 cut(s) 144, 683, 772, 817, 1355, 1641, 2437, 2530, 2967
LmnI GCTCC 4 cut(s) 857, 1429, 2083, 2221
Lsp1109I GCAGC 5 cut(s) 1485, 1691, 2087, 2408, 2773
MaeI CTAG 8 cut(s) 384, 582, 1353, 1761, 1892, 2465, 2925, 3063
MaeII ACGT 3 cut(s) 1529, 1587, 2508
MaeIII GTNAC 7 cut(s) 557, 837, 1082, 1097, 1460, 2564, 2821
MalI GATC 9 cut(s) 146, 685, 774, 819, 1357, 1643, 2439, 2532, 2969
MboI GATC 9 cut(s) 144, 683, 772, 817, 1355, 1641, 2437, 2530, 2967
MfeI CAATTG 1 cut(s) 2406
MflI RGATCY 1 cut(s) 1355
MhlI GDGCHC 2 cut(s) 735, 1137
MlsI TGGCCA 2 cut(s) 1172, 2090
MluNI TGGCCA 2 cut(s) 1172, 2090
MlyI GAGTC 6 cut(s) 782, 1177, 1522, 1973, 2711, 2959
MmeI TCCRAC 1 cut(s) 444
Mox20I TGGCCA 2 cut(s) 1172, 2090
MroI TCCGGA 2 cut(s) 2272, 2680
MroXI GAANNNNTTC 2 cut(s) 129, 369
MscI TGGCCA 2 cut(s) 1172, 2090
MseI TTAA 7 cut(s) 48, 57, 393, 1223, 1263, 1638, 3116
MslI CAYNNNNRTG 1 cut(s) 1855
Msp20I TGGCCA 2 cut(s) 1172, 2090
MspA1I CMGCKG 2 cut(s) 518, 2764
MspCI CTTAAG 2 cut(s) 1222, 1637
MspI CCGG 6 cut(s) 779, 1752, 2273, 2681, 2793, 2978
MspR9I CCNGG 6 cut(s) 149, 780, 1180, 1212, 2793, 2978
MunI CAATTG 1 cut(s) 2406
Mva1269I GAATGC 2 cut(s) 84, 369
MvaI CCWGG 3 cut(s) 149, 1180, 1212
MvnI CGCG 1 cut(s) 3089
MwoI GCNNNNNNNGC 9 cut(s) 27, 90, 674, 1479, 1706, 2393, 2402, 2411, 3076
NciI CCSGG 3 cut(s) 780, 2793, 2978
NcoI CCATGG 1 cut(s) 237
NdeI CATATG 1 cut(s) 231
NdeII GATC 9 cut(s) 144, 683, 772, 817, 1355, 1641, 2437, 2530, 2967
NlaIV GGNNCC 6 cut(s) 345, 1671, 2679, 2710, 2741, 3071
NmuCI GTSAC 4 cut(s) 557, 837, 1460, 2564
NspI RCATGY 3 cut(s) 580, 2523, 2665
PaeI GCATGC 1 cut(s) 580
PagI TCATGA 1 cut(s) 994
PciI ACATGT 1 cut(s) 2519
PctI GAATGC 2 cut(s) 84, 369
PdmI GAANNNNTTC 2 cut(s) 129, 369
PflMI CCANNNNNTGG 2 cut(s) 413, 1179
PfoI TCCNGGA 1 cut(s) 1178
PinAI ACCGGT 1 cut(s) 1751
PkrI GCNGC 7 cut(s) 1475, 1681, 2077, 2398, 2763, 2766, 3091
PleI GAGTC 6 cut(s) 782, 1177, 1521, 1972, 2710, 2958
PpsI GAGTC 6 cut(s) 782, 1177, 1521, 1972, 2710, 2958
PpuMI RGGWCCY 2 cut(s) 52, 1669
PscI ACATGT 1 cut(s) 2519
Psp5II RGGWCCY 2 cut(s) 52, 1669
Psp6I CCWGG 3 cut(s) 147, 1178, 1210
PspFI CCCAGC 2 cut(s) 963, 1626
PspGI CCWGG 3 cut(s) 147, 1178, 1210
PspN4I GGNNCC 6 cut(s) 345, 1671, 2679, 2710, 2741, 3071
PspPPI RGGWCCY 2 cut(s) 52, 1669
PstI CTGCAG 1 cut(s) 2077
PstNI CAGNNNCTG 2 cut(s) 847, 2081
PsuI RGATCY 1 cut(s) 1355
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 5 cut(s) 173, 527, 1114, 1388, 1532
RsaNI GTAC 5 cut(s) 172, 526, 1113, 1387, 1531
RseI CAYNNNNRTG 1 cut(s) 1855
SaqAI TTAA 7 cut(s) 48, 57, 393, 1223, 1263, 1638, 3116
SatI GCNGC 7 cut(s) 1474, 1680, 2076, 2397, 2762, 2765, 3090
Sau3AI GATC 9 cut(s) 144, 683, 772, 817, 1355, 1641, 2437, 2530, 2967
SchI GAGTC 6 cut(s) 782, 1177, 1522, 1973, 2711, 2959
ScrFI CCNGG 6 cut(s) 149, 780, 1180, 1212, 2793, 2978
SduI GDGCHC 2 cut(s) 735, 1137
SfcI CTRYAG 1 cut(s) 2073
SinI GGWCC 5 cut(s) 52, 344, 1438, 1669, 2429
SmiMI CAYNNNNRTG 1 cut(s) 1855
SmlI CTYRAG 5 cut(s) 256, 1222, 1279, 1637, 2534
SmoI CTYRAG 5 cut(s) 256, 1222, 1279, 1637, 2534
SphI GCATGC 1 cut(s) 580
SspI AATATT 1 cut(s) 45
SspMI CTAG 8 cut(s) 384, 582, 1353, 1761, 1892, 2465, 2925, 3063
StyD4I CCNGG 6 cut(s) 147, 778, 1178, 1210, 2791, 2976
StyI CCWWGG 4 cut(s) 237, 698, 1363, 2646
TaaI ACNGT 6 cut(s) 129, 922, 1460, 1604, 2142, 2554
TaiI ACGT 3 cut(s) 1532, 1590, 2511
TatI WGTACW 2 cut(s) 171, 525
TauI GCSGC 2 cut(s) 2767, 3092
Tru1I TTAA 7 cut(s) 48, 57, 393, 1223, 1263, 1638, 3116
Tru9I TTAA 7 cut(s) 48, 57, 393, 1223, 1263, 1638, 3116
TscAI CASTG 6 cut(s) 562, 935, 2247, 2557, 2949, 3030
TseFI GTSAC 4 cut(s) 557, 837, 1460, 2564
TseI GCWGC 5 cut(s) 1473, 1679, 2075, 2396, 2761
Tsp45I GTSAC 4 cut(s) 557, 837, 1460, 2564
TspGWI ACGGA 3 cut(s) 414, 956, 1031
TspRI CASTG 6 cut(s) 562, 935, 2247, 2557, 2949, 3030
Van91I CCANNNNNTGG 2 cut(s) 413, 1179
Vha464I CTTAAG 2 cut(s) 1222, 1637
VpaK11BI GGWCC 5 cut(s) 52, 344, 1438, 1669, 2429
XapI RAATTY 5 cut(s) 1003, 1033, 1546, 1827, 2618
XbaI TCTAGA 1 cut(s) 1352
XceI RCATGY 3 cut(s) 580, 2523, 2665
XcmI CCANNNNNNNNNTGG 1 cut(s) 319
XmnI GAANNNNTTC 2 cut(s) 129, 369
XspI CTAG 8 cut(s) 384, 582, 1353, 1761, 1892, 2465, 2925, 3063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.