MD16G1139300.v1.1
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
10723556 .. 10735841
12286 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1139300.v1.1.491

Sequence Viewer

Length: 6648 bp
ATGTCGTCGAAAGAGAGCTCAACTGTTCGATTCCCAGCCCGAAACGTCGCGAGGAACTCGCAATCCGAACCGAACGAGAACGAATTCGAAACCGCGTCGAATCCAATCCACTTTCCACCTCCAAGAACGCCTCTTAACAGCATTGCAGATCCAGCCCAGCTGCAGAAGGAACTCCATGAGTTTGATTTCGATTCGCAACCAAAGTTCGAGGCGATTCGATCCGGTCGGTATTCGTTATCGTTGGATAGGAAGATCGAAGCTCCGGAGAAAGCTGGACATGGTGGAGGTCTCAGCTATGGAACTCCTAGGGTTTCGTCAGGTCGCGGAGGGAAGGCGCACTCGGAGCCAAACTCGGCTCAAAGCACTCCGGCAAGGACCAGTAGAGCTTCCATTGGTGGAGCAATGGGAGGTTGTACCGGAAGCAAAGCTCTGCAGTACAATGGAGGCAGAGCAGGGAGCTGTTCTAGAATCTCCCGGGAGGTTTCTGTGGTGAATTCCGAGGTTTTAGCTCAAGTTCCGCATTTTGAGCTAGCGGAGGACTCTTCGTTCTGGAACGATCACAATGTGCAGGTGCTGATTCGAATTCGGCCATTGAGTAGTATGGAGAGAGCTTTGCAAGGGCAAGGCCGGTGTTTGAAGCAGGAAAGCGCGAAAACTCTGGTTTGGCATGGTCATCCGGAAACCAGATTCACATTCGATCACATTGCATGCGAGACAATATCACAGGAAAAGCTGTTCAGAGTTGCTGGGTTGCCCATGGTGGAGAATTGCTTGTCTGGTTATAATAGCTGCATGTTTGCTTACGGTCAGACGGGTAGTGGCAAAACATACACAATGATGGGTGAAATATACGAGGTTGAAGGGCAGCTCAATGAAGATTGTGGGCTTACTCCACGCATTTTTGAGTATTTGTTTAAGAGGATCAGACTGGAAGAGGAAAGCAGGCGGGAGGAACAGCTGAAGTACAGCTGCAAATGTTCCTTTCTCGAGATTTACAATGAGCAGATAACAGATCTCTTGGAGCCTACATCAACTAATCTACAACTCAGGGAGGACTTGAAGAAAGGGGTATATGTTGAAAACCTTACAGAATACAATGTGAGGAATGTTAATGATGTTGTCAAGCTCCTGTTACAGGGTGCTTCAAACAAAAAAATGGCAGCAACGCAGATGAACAGTGAGAGCAGCCGATCCCACAGTGTTTTCACATGTATCATAGAAAGCCGTTGGGAAAAGGATTCCATGACCCATTTTAGATTCGCTAGGTTGAACTTAGTAGATCTAGCTGGCTCAGAAAGGCAGAAAAGCTCTGGTGCAGAGGGAGATCGTTTGAAAGAAGCAGCAAATATCAACAAATCATTATCAACTCTTGGCTTGGTGATAATGTCTTTGGTCGACTTAGCACATGGGAAACATAGACATGTTCCCTATAGAGATTCAAGGCTTACATTTCTTCTTCAGGATTCTCTGGGTGGGAACTCAAAAACAACTATAATATCGAATGTCAGCCCATCAATTTGTTCTGCAAATGAGACACTTAGCACTTTGAAGTTTGCCCAGCGTGCCAAACTCATCCAGAACAATGCTAAAGTGAATGAAGATGCTTCAGGTGACACAACTGCACTTCAGCGACAAATCCAACAGCTGAAGGGCCAGTTGTCCATCCTAATGATGCACCATAACCTCTCGAGGTCTTCAACAAGTTGCGTGCCAAGTAGTGAAGAACCTAGATTCAGTGACTTGCCTGAGAAATATGATGACTCTCAAGAAGAAAACATGGCAACTAATAAGTTACCAATCATGCAAAGCAAGAAGATGAAAAGCATGGAGACTGTTTTAGTTGGTGCCCTAAGAAGGGAAAAGATGGCAGAACATGAAGTCCAGAAGTTGGTGGCTGAAATTGAACACATGAACAACTTGGTTTGCCAAAGAGAGGAGGATGTTGGACATAATAAAGTGATGCTAAGGTTTCGGGAGGACAAAATTAAACGATTTGAACTGTTGACGGATGGAATGTTGTCTGCTGAGAAGTATCTTATGGAGGAGAACAAGGCTTTACTGGAAGAGATTCAGCTGCTTCAAGCAAGAATTGATAGCAATCCAGAATTGACCCGATATGCTGTGGAGAACTTTAGACTTCTTGAGCAACTTAAATTGTACCAAAACTTTCACGAGCATGGAGAGCGAGAAACATTGCTAGCTGAAATATCAGAATTACGCAATCAGCTTCTGGATACACTTCAAGGAAAGCTTCCATGCTCAAATGAAGATCAGAATAGTGATACCATAAGGGAACTGGAAGATTGCAGGATCATGAATTCAAAACTGATTAGGGAAGTAGATGAATTACAACTTGAACTGCAAAAGCATATGAACTCCAGTCAGGCTACCTCGGGCTCTGTCAGATATTCTTTCTCCAAGGAAACTGAGGAATTCAGGCAATCAGATAAATATTCAATGGTTGAAACCTTGTCTATAAGAAGTGACTCTGGAGATGAAATAGCATCTTACACTCAGGAGGAAAGCTGCAGATACATGGAAGTCTCATGCAACAAGGACAAATTAGAAATCCAATCTGAGCTGAAATGTGAAAGTCATTTTCTGAAATCAGGTGATATACATAAAGACAACAAGGGCATGATAATGATGATCACTGAAGACGTTGAGAGGAAGGCTTTGCAAGCTAAGCTGGACAAAATGGCTAAGGACCTTGAGGAGGTTGAGATGGAGACAGCGAGAACAATTCTTCATTTACAGGAAGAGGTTGCTGCCCTTCAGTTTGAACTTGATGAGAGATTACAGTGCATGATTCAGGAAAATACAATACTGAAAAACACAATTGCAGCAAAAGAGGATCAAATGAGAACACTGAGTGGGGAGTGGGAAAAGGCAACCTTAGAACTAACAAGATTCCTCCTAGATGGTTCTAGATCCCTCAGAAACGCCTCCAGCCAAATAGAAACTATTGCTTGTTCATTTCCTCAAGCTAACATTTGTGTCAGTGAAGATGTCCAGAGGGCTGCCAAAGTTTGCATGGAAAAAGAAGAAACAATTGAACTTCTACAGAAGAGTTTGGAAGATGCGCGAATGATGGTAATGGAAATGGAACAGAAGTTAAGTTCCTTGAAGGGAGCAACAATGGCTTTAAGTGAACTCCAGCATTTGGATAATGATGAAAGCACCAAAGAGGCAATTCCCTTCTGCATGCTGTCAGATGAGCAGACCAACATGATTGAGATGCTAGAGAGAAAAATCATATATAAGGAAAGTCAGTTCAAAGAAGCAGAAAAATGTGCCAATGCTGCGTTCCTTGTAATAAAATGGCTTATGGATCGTAATGCTAGTTATGCAACGGAGAGAAAGATTCCTATCTCAGTTCTAGCTATACCAGCCAGAATGCCCAACCACACAACTAGTGACACAAATGAAAATGCTTTAAGAGAGCCTTGCAAAATTTCTCAGTCTTGTATGGTTGAACCGCTATCATTAGAAGCACATAAGTATTTGAAATCTGAAAATCTTTATCACATGCTGCATGAAATAAAGAATGAGCTCAGTGTAGCAAATGGTAGATTGAAAACTACTGAAGATTTCATTTACACAATAAATGAGGATGAAGATAAATGGAGTACTGATAGTTTGACGTCCAGCTGTGATACTTCAACAGAAAGTTCTTGTTCTCTTAACCAATTTTGGGCACTTGAAGGGAAAACGGGGGAACTAAGAGTTGAAGAAGGCTCAGTGCTTCAGTCCGCTGATCATGATCCAGAGGAGTCAAAGAAGCTCTTCAAACATTTCACTCATTCTGAAGGAGAATCATTCTGCTTGAAAAAAGAATTAGAGATGACACGTGATGCTTTCCACAAACTCTCTGTTAGGCTAACCACACTTGTTAGTGAGTTGGACATTGGAGGTAGTTCTCAACCAGCAGAGTTGAAAGAAATTGTTCCATTGTTTGACTTGAGGATGGAGAATGCTGATGCAGGGTGTTGTATTACAGAAAAGGTAGCTGCCGATCAGAAGAGTGATTTTGCTGGTAGCTTCTTAAGCAAATTTGAAGAAGCGCATGCAATGATAAAAGAAGCCGATGTTATGTTAAATGCCTTGGTGGAAGCAAATGAAAATGCAAAAGAATTGACTGGGCTGTGGAAGCAAGCTGGTGAGGATCTGATGTTAGAGAGAGCAAGCTTTACTGAAGAAGTTGAACATCTCAAATCTTCAGTACGTCTAATAGAAAGAGAGAACGAGCTACTGCAGGATCAATCTCATTATAATTTGGTGGAGATAGCAAAATCATTGTCTTTGCTTGAAGAGTGTTTTATGCAATTAAAAAGTGATGTGGAGGACAAGTTCAAAGTAATATATGCTGATACTTCATCCATGGGAAGGGAGATACACTGCTTTATTAGCAATTCAAGATCATTGCTTGAAGAACTATGCTCTGAGAGATTGGAGAAAGACTTTTCCACATCTGTCCTTCATCAGTGTCTCATTGGAGAGCTTATCTCCAGAATATCATGTTCTAATGTTGAAATCAGTTTCCATCCATTCAGACAGCAAGAAGGCTGCTCAACAACAAATAAACTGCAAAGGATATCGTCAAGTTGTGAGGATGGCATAGTGCGTACTAGTAAAATCTCCAAAGATGATGCACATCAAAGAGGAACAAATTTGAAAGCCGGTGACTTCAATTTATCCCACAATACTTTGATTGATGAGAATTTAGCACTGAAGGAAGAATTGCAACGGAAAGAGGTTCTACTAGAGGGCTTGCATTTTGATTTTAGAATGTTGCAGGAATCAGCATCCAGCACAAAGGATATAAAGGATGAAACTGAAAGGCTGATGAAATCTTTGAGCCAAATCCAGAATGAACTAGAATTAAAAACATGCCTACTTGATGATATGTTGGCTCAACATGAAAATCTCGGGGGTCGTCTCACTGACACTGAAAAGGCTCTGCTTGAATCAAATTTTAATCTCGAGCAGGCCACAGAAACAATCAACACTCTTTCAGAGCAAAACTGTGAGTTGAAAGAGCTTCTAAAAGATCTCTATCTCAAAATGTCTGAAGCCGAAGAACAACTGGAAGAGCAGAAGGAAGTGGTGAAAGGTTTGGAAGAGGAAATTATTCATTTGACTTCTTCAATGGAAAAAAAATTACTCTACTCAGTTGAAGGCTTTGAGGATGATTTGAGAAGAGTCATCAGCGAGAGAGACCAACTCCTAGAAGAGGTCCATTCCCTGAATGATAAACTTGAGATGGCATATGCAATGGCCGATGAACATGAAGCTATATCCGTTGAAGCTCGCCAGGAATCTGAGTCAAGTAAGATGTATGCCGAACAAAAGGAAGAGGAGGTTAAGATTTTAGAACGCTCTGTTGAGGAGCTTGAATGTACCATCAATGTATTGGAAAAAAAGGTATATGAGATGAATGATGAGGTAGAAAGACATCGGTTAATCAGAGATGCACTAGAACTGGAACTCCAAGCTTTAAGACACAGATTGTATACAGTTGAAAATTTCGGTGAACATATGGATTCAGAAAACATAAACGGTGAACAAGCTGAAGATCTGATATCTAGGCAACTGCAGAGTAGGCTACTGGAACTTCATGAGGCTCACAACAAGATAAAGCTTCTTGAAGAGGAAAGGGCAGAGCAGGATAAAGAGATCAAACAATGCAAAGAATACATCTCTGAAATCGTGTTGCATGCTGAAGCCCAGACGTCACAGTACCAACAGAAGTACAAGACTCTTGAGGCCATGGTTTGTGAAGTGAAAGAAGATAAGAGAAACGCAACATCAACAGCTGTGGCATCAGACAAATCAGAGAAAATCAGGACGAGGGGTTCCAGTTCGCCATTCAGATGCATTTCAAGTTTGGTTCAGCAGATGAATACGGAGAAGGAACAAGAATTGTCTTCGGCCAGGCTTCGGATTGAGGAACTAGAGAATCTGGCAGCTAGCCGGCAGAAGGAGGTATGTTTGCTGAATACTAGGCTGACTGCAGCAGAGAGCATGACACATGATGTCATTCGGGATTTACTTGGTGTCAAATTGGACATGACTAACTATGCAAACTTGATAGACCAATATCACGTTCAAAAACTAGTAGAAGAGGCTCATCAGCAAACAGAAGAATTCCAAGCAAAGGAGCAAGAAATTCTCGGCTTAAGGAAGCAGATAGATGATCTAATGGAGGAAAGACAGAGTTGCATATCCGAAATAGATAAAAAGGAAGAAGATATGATGACTGCTCGGACGACATTACAACAACTCCAAGACAGAGATCAAATGCTTTCTGCACAGAATGAGAAGTTGAAGGTGGATAAGACCAATCTGAAGCGGAGGGTGGCGGAGCTGGATGAGATGGTAAGAACAATTCTTGGAACACCAAAAACACAGCAGCAGCAGCCGCCAATTCACCGCACATCCAAGACCAAGAACAGTAGCTCATTGAAGTTGCATGAGGTTGATTACGCCAGGAGACTGGAACAGTCCGAGAAGCATCTTTCTCGCGTGAATGGCGAACTTGCTCAATACATCAAATCTGGCAGCAGCAGTGGCACCGGTGGTGGACATTCACGAGACAAGCGTTTCGGACACACGTCGGAAACGGACTATAGAAAGCAGAAGAATTGA

Protein Analysis

2216

Amino Acids

252.56

Weight (kDa)

5.18

Isoelectric Point (pI)

52.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 190 - 340 2.8e-20 Microtubule binding
Kinesin PF00225 194 - 525 2.1e-110 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 783, 4272
AarI CACCTGC 1 cut(s) 559
AatII GACGTC 2 cut(s) 3647, 5735
Acc36I ACCTGC 1 cut(s) 559
AccB1I GGYRCC 2 cut(s) 1844, 6572
AccB7I CCANNNNNTGG 2 cut(s) 1888, 3163
AccI GTMKAC 2 cut(s) 1395, 5513
AccII CGCG 6 cut(s) 50, 95, 324, 650, 3085, 6525
AccIII TCCGGA 2 cut(s) 262, 676
AcoI YGGCCR 3 cut(s) 587, 5277, 5931
AcvI CACGTG 1 cut(s) 3851
AcyI GRCGYC 2 cut(s) 3644, 5732
AdeI CACNNNGTG 2 cut(s) 565, 2873
AflII CTTAAG 2 cut(s) 4045, 6178
AflIII ACRYGT 4 cut(s) 1208, 1420, 3848, 6612
AgeI ACCGGT 1 cut(s) 6575
AhlI ACTAGT 3 cut(s) 3413, 4628, 6115
AjiI CACGTC 1 cut(s) 6615
AjnI CCWGG 3 cut(s) 5313, 5933, 6488
AjuI GAANNNNNNNTTGG 4 cut(s) 3290, 3322, 6090, 6122
Alw21I GWGCWC 2 cut(s) 20, 3555
AlwNI CAGNNNCTG 2 cut(s) 574, 2230
Ama87I CYCGRG 6 cut(s) 474, 986, 1687, 2392, 4928, 4982
Aor13HI TCCGGA 2 cut(s) 262, 676
AoxI GGCC 7 cut(s) 587, 625, 1651, 4989, 5277, 5766, 5931
ArsI GACNNNNNNTTYG 4 cut(s) 4283, 4315, 6587, 6619
AsiGI ACCGGT 1 cut(s) 6575
Asp700I GAANNNNTTC 5 cut(s) 83, 2067, 3785, 3945, 5130
AspA2I CCTAGG 1 cut(s) 305
AspLEI GCGC 4 cut(s) 337, 650, 3085, 4066
AspS9I GGNCC 4 cut(s) 375, 1651, 2707, 5236
AsuC2I CCSGG 2 cut(s) 475, 476
AsuII TTCGAA 2 cut(s) 87, 580
AsuNHI GCTAGC 3 cut(s) 529, 2197, 5969
AvaI CYCGRG 6 cut(s) 474, 986, 1687, 2392, 4928, 4982
AvaII GGWCC 3 cut(s) 375, 2707, 5236
AvrII CCTAGG 1 cut(s) 305
BaeGI GKGCMC 2 cut(s) 1849, 3700
BanI GGYRCC 2 cut(s) 1844, 6572
BanII GRGCYC 3 cut(s) 20, 2399, 3555
BauI CACGAG 2 cut(s) 2171, 6591
BbrPI CACGTG 1 cut(s) 3851
BbsI GAAGAC 3 cut(s) 1686, 2664, 5919
Bbv12I GWGCWC 2 cut(s) 20, 3555
BceAI ACGGC 1 cut(s) 1209
BcgI CGANNNNNNTGC 4 cut(s) 686, 720, 6503, 6537
BciT130I CCWGG 3 cut(s) 5315, 5935, 6490
BciVI GTATCC 1 cut(s) 2227
BclI TGATCA 2 cut(s) 2649, 3757
BcnI CCSGG 2 cut(s) 475, 476
BcuI ACTAGT 3 cut(s) 3413, 4628, 6115
BfmI CTRYAG 9 cut(s) 161, 431, 1429, 2527, 3062, 4253, 5594, 6012, 6628
BfrI CTTAAG 2 cut(s) 4045, 6178
BfuAI ACCTGC 1 cut(s) 559
BfuI GTATCC 1 cut(s) 2227
BglII AGATCT 4 cut(s) 1012, 1279, 5050, 5575
BlnI CCTAGG 1 cut(s) 305
BlpI GCTNAGC 1 cut(s) 2685
BmcAI AGTACT 1 cut(s) 3631
Bme1390I CCNGG 5 cut(s) 475, 476, 5315, 5935, 6490
Bme18I GGWCC 3 cut(s) 375, 2707, 5236
BmeT110I CYCGRG 6 cut(s) 474, 986, 1687, 2392, 4928, 4982
BmgBI CACGTC 1 cut(s) 6615
BmgT120I GGNCC 4 cut(s) 375, 1651, 2707, 5236
BmiI GGNNCC 5 cut(s) 345, 1023, 1846, 5857, 6574
BmrFI CCNGG 5 cut(s) 475, 476, 5315, 5935, 6490
BmrI ACTGGG 1 cut(s) 4149
BmtI GCTAGC 3 cut(s) 533, 2201, 5973
BmuI ACTGGG 1 cut(s) 4149
BoxI GACNNNNGTC 1 cut(s) 6613
BpiI GAAGAC 3 cut(s) 1686, 2664, 5919
BplI GAGNNNNNCTC 6 cut(s) 335, 367, 4490, 4522, 5208, 5240
BpmI CTGGAG 5 cut(s) 2362, 2511, 2932, 3140, 4492
Bpu10I CCTNAGC 2 cut(s) 1964, 2703
Bpu1102I GCTNAGC 1 cut(s) 2685
Bpu14I TTCGAA 2 cut(s) 87, 580
BpuEI CTTGAG 8 cut(s) 495, 1749, 2162, 2732, 2967, 3982, 5279, 5783
BpuMI CCSGG 2 cut(s) 475, 476
BsaAI YACGTR 1 cut(s) 3851
BsaBI GATNNNNATC 5 cut(s) 2097, 3368, 3762, 4653, 5055
BsaHI GRCGYC 2 cut(s) 3644, 5732
BsaI GGTCTC 2 cut(s) 293, 5211
BsaJI CCNNGG 9 cut(s) 305, 474, 498, 756, 2391, 2418, 4104, 4380, 5769
BsaWI WCCGGW 5 cut(s) 221, 262, 416, 676, 6575
BsaXI ACNNNNNCTCC 6 cut(s) 4334, 4364, 5472, 5502, 6267, 6297
Bse118I RCCGGY 4 cut(s) 627, 4679, 5973, 6575
Bse3DI GCAATG 7 cut(s) 141, 408, 702, 2192, 4077, 4421, 5280
Bse8I GATNNNNATC 5 cut(s) 2097, 3368, 3762, 4653, 5055
BseAI TCCGGA 2 cut(s) 262, 676
BseBI CCWGG 3 cut(s) 5315, 5935, 6490
BseDI CCNNGG 9 cut(s) 305, 474, 498, 756, 2391, 2418, 4104, 4380, 5769
BseJI GATNNNNATC 5 cut(s) 2097, 3368, 3762, 4653, 5055
BseMI GCAATG 7 cut(s) 141, 408, 702, 2192, 4077, 4421, 5280
BseRI GAGGAG 6 cut(s) 1949, 2057, 2729, 3785, 5372, 5402
BseSI GKGCMC 2 cut(s) 1849, 3700
BseYI CCCAGC 4 cut(s) 34, 156, 746, 1557
BsgI GTGCAG 4 cut(s) 587, 1335, 1605, 6294
Bsh1236I CGCG 6 cut(s) 50, 95, 324, 650, 3085, 6525
Bsh1285I CGRYCG 1 cut(s) 226
BshFI GGCC 7 cut(s) 589, 627, 1653, 4991, 5279, 5768, 5933
BshNI GGYRCC 2 cut(s) 1844, 6572
BshTI ACCGGT 1 cut(s) 6575
BsiEI CGRYCG 1 cut(s) 226
BsiHKAI GWGCWC 2 cut(s) 20, 3555
BsiHKCI CYCGRG 6 cut(s) 474, 986, 1687, 2392, 4928, 4982
BsmBI CGTCTC 1 cut(s) 4943
BsmI GAATGC 2 cut(s) 3402, 3979
BsnI GGCC 7 cut(s) 589, 627, 1653, 4991, 5279, 5768, 5933
Bso31I GGTCTC 2 cut(s) 293, 5211
BsoBI CYCGRG 6 cut(s) 474, 986, 1687, 2392, 4928, 4982
Bsp119I TTCGAA 2 cut(s) 87, 580
Bsp1286I GDGCHC 5 cut(s) 20, 1849, 2399, 3555, 3700
Bsp13I TCCGGA 2 cut(s) 262, 676
Bsp1720I GCTNAGC 1 cut(s) 2685
Bsp19I CCATGG 3 cut(s) 756, 4380, 5769
Bsp68I TCGCGA 1 cut(s) 50
BspANI GGCC 7 cut(s) 589, 627, 1653, 4991, 5279, 5768, 5933
BspEI TCCGGA 2 cut(s) 262, 676
BspFNI CGCG 6 cut(s) 50, 95, 324, 650, 3085, 6525
BspHI TCATGA 3 cut(s) 2313, 3760, 5617
BspLI GGNNCC 5 cut(s) 345, 1023, 1846, 5857, 6574
BspMAI CTGCAG 6 cut(s) 165, 435, 2531, 4257, 5598, 6016
BspMI ACCTGC 1 cut(s) 559
BspOI GCTAGC 3 cut(s) 533, 2201, 5973
BspQI GCTCTTC 2 cut(s) 3791, 5085
BspT104I TTCGAA 2 cut(s) 87, 580
BspT107I GGYRCC 2 cut(s) 1844, 6572
BspTI CTTAAG 2 cut(s) 4045, 6178
BspTNI GGTCTC 2 cut(s) 293, 5211
BsrDI GCAATG 7 cut(s) 141, 408, 702, 2192, 4077, 4421, 5280
BsrFI RCCGGY 4 cut(s) 627, 4679, 5973, 6575
BssAI RCCGGY 4 cut(s) 627, 4679, 5973, 6575
BssECI CCNNGG 9 cut(s) 305, 474, 498, 756, 2391, 2418, 4104, 4380, 5769
BssNAI GTATAC 1 cut(s) 5514
BssNI GRCGYC 2 cut(s) 3644, 5732
BssSI CACGAG 2 cut(s) 2171, 6591
BssT1I CCWWGG 6 cut(s) 305, 756, 2418, 4104, 4380, 5769
Bst1107I GTATAC 1 cut(s) 5514
Bst2BI CACGAG 2 cut(s) 2171, 6591
Bst2UI CCWGG 3 cut(s) 5315, 5935, 6490
BstACI GRCGYC 2 cut(s) 3644, 5732
BstAFI CTTAAG 2 cut(s) 4045, 6178
BstBAI YACGTR 1 cut(s) 3851
BstBI TTCGAA 2 cut(s) 87, 580
BstDSI CCRYGG 3 cut(s) 756, 4380, 5769
BstENI CCTNNNNNAGG 3 cut(s) 1133, 2714, 5231
BstFNI CGCG 6 cut(s) 50, 95, 324, 650, 3085, 6525
BstHHI GCGC 4 cut(s) 337, 650, 3085, 4066
BstMCI CGRYCG 1 cut(s) 226
BstNI CCWGG 3 cut(s) 5315, 5935, 6490
BstNSI RCATGY 9 cut(s) 711, 796, 1212, 1424, 3208, 3532, 4070, 4893, 5720
BstPAI GACNNNNGTC 1 cut(s) 6613
BstSCI CCNGG 5 cut(s) 473, 474, 5313, 5933, 6488
BstSFI CTRYAG 9 cut(s) 161, 431, 1429, 2527, 3062, 4253, 5594, 6012, 6628
BstSLI GKGCMC 2 cut(s) 1849, 3700
BstUI CGCG 6 cut(s) 50, 95, 324, 650, 3085, 6525
BstV2I GAAGAC 3 cut(s) 1686, 2664, 5919
BstX2I RGATCY 7 cut(s) 148, 1012, 1279, 2930, 4165, 5050, 5575
BstXI CCANNNNNNTGG 1 cut(s) 6496
BstYI RGATCY 7 cut(s) 148, 1012, 1279, 2930, 4165, 5050, 5575
BstZ17I GTATAC 1 cut(s) 5514
BsuI GTATCC 1 cut(s) 2227
BsuRI GGCC 7 cut(s) 589, 627, 1653, 4991, 5279, 5768, 5933
BtgI CCRYGG 3 cut(s) 756, 4380, 5769
BtrI CACGTC 1 cut(s) 6615
BtsI GCAGTG 2 cut(s) 4396, 6574
BtuMI TCGCGA 1 cut(s) 50
BveI ACCTGC 1 cut(s) 559
CaiI CAGNNNCTG 2 cut(s) 574, 2230
CciI TCATGA 3 cut(s) 2313, 3760, 5617
CfoI GCGC 4 cut(s) 337, 650, 3085, 4066
Cfr10I RCCGGY 4 cut(s) 627, 4679, 5973, 6575
Cfr13I GGNCC 4 cut(s) 375, 1651, 2707, 5236
Cfr9I CCCGGG 1 cut(s) 474
CseI GACGC 1 cut(s) 84
CspAI ACCGGT 1 cut(s) 6575
CspCI CAANNNNNGTGG 2 cut(s) 5799, 5834
DraIII CACNNNGTG 2 cut(s) 565, 2873
EaeI YGGCCR 3 cut(s) 587, 5277, 5931
EciI GGCGGA 1 cut(s) 6377
Ecl136II GAGCTC 2 cut(s) 18, 3553
Eco130I CCWWGG 6 cut(s) 305, 756, 2418, 4104, 4380, 5769
Eco24I GRGCYC 3 cut(s) 20, 2399, 3555
Eco31I GGTCTC 2 cut(s) 293, 5211
Eco32I GATATC 2 cut(s) 4596, 5583
Eco47I GGWCC 3 cut(s) 375, 2707, 5236
Eco53kI GAGCTC 2 cut(s) 18, 3553
Eco72I CACGTG 1 cut(s) 3851
Eco88I CYCGRG 6 cut(s) 474, 986, 1687, 2392, 4928, 4982
EcoICRI GAGCTC 2 cut(s) 18, 3553
EcoNI CCTNNNNNAGG 3 cut(s) 1133, 2714, 5231
EcoO109I RGGNCCY 1 cut(s) 2707
EcoRI GAATTC 6 cut(s) 83, 493, 582, 2317, 2432, 6146
EcoRII CCWGG 3 cut(s) 5313, 5933, 6488
EcoRV GATATC 2 cut(s) 4596, 5583
EcoT14I CCWWGG 6 cut(s) 305, 756, 2418, 4104, 4380, 5769
EcoT22I ATGCAT 1 cut(s) 5879
EcoT38I GRGCYC 3 cut(s) 20, 2399, 3555
ErhI CCWWGG 6 cut(s) 305, 756, 2418, 4104, 4380, 5769
Esp3I CGTCTC 1 cut(s) 4943
FalI AAGNNNNNCTT 8 cut(s) 2235, 2267, 2879, 2911, 3430, 3462, 3770, 3802
FauI CCCGC 1 cut(s) 939
FauNDI CATATG 3 cut(s) 2370, 5269, 5538
FbaI TGATCA 2 cut(s) 2649, 3757
FblI GTMKAC 2 cut(s) 1395, 5513
FriOI GRGCYC 3 cut(s) 20, 2399, 3555
GlaI GCGC 4 cut(s) 336, 649, 3084, 4065
GsaI CCCAGC 4 cut(s) 38, 160, 750, 1561
GsuI CTGGAG 5 cut(s) 2362, 2511, 2932, 3140, 4492
HaeIII GGCC 7 cut(s) 589, 627, 1653, 4991, 5279, 5768, 5933
HgaI GACGC 1 cut(s) 84
HhaI GCGC 4 cut(s) 337, 650, 3085, 4066
Hin1I GRCGYC 2 cut(s) 3644, 5732
Hin6I GCGC 4 cut(s) 335, 648, 3083, 4064
HinP1I GCGC 4 cut(s) 335, 648, 3083, 4064
HincII GTYRAC 2 cut(s) 1396, 2004
HindII GTYRAC 2 cut(s) 1396, 2004
HindIII AAGCTT 4 cut(s) 2249, 4186, 5493, 5639
Hpy166II GTNNAC 7 cut(s) 1396, 2004, 3152, 5514, 5534, 5564, 6584
Hpy8I GTNNAC 7 cut(s) 1396, 2004, 3152, 5514, 5534, 5564, 6584
Hpy99I CGWCG 4 cut(s) 10, 50, 100, 6619
HpyCH4IV ACGT 8 cut(s) 45, 2661, 3644, 3850, 4225, 5732, 6105, 6614
HpySE526I ACGT 8 cut(s) 45, 2661, 3644, 3850, 4225, 5732, 6105, 6614
Hsp92I GRCGYC 2 cut(s) 3644, 5732
HspAI GCGC 4 cut(s) 335, 648, 3083, 4064
Kpn2I TCCGGA 2 cut(s) 262, 676
KroI GCCGGC 1 cut(s) 5973
KroNI GCCGGC 1 cut(s) 5975
Ksp22I TGATCA 2 cut(s) 2649, 3757
LguI GCTCTTC 2 cut(s) 3791, 5085
MaeII ACGT 8 cut(s) 45, 2661, 3644, 3850, 4225, 5732, 6105, 6614
MaeIII GTNAC 8 cut(s) 1131, 1610, 1736, 1791, 2483, 3416, 4682, 5733
MfeI CAATTG 2 cut(s) 2838, 3051
MflI RGATCY 7 cut(s) 148, 1012, 1279, 2930, 4165, 5050, 5575
MhlI GDGCHC 5 cut(s) 20, 1849, 2399, 3555, 3700
MlyI GAGTC 7 cut(s) 533, 1754, 2480, 3782, 5211, 5333, 5752
MmeI TCCRAC 5 cut(s) 222, 1663, 1924, 3882, 6597
Mph1103I ATGCAT 1 cut(s) 5879
MroI TCCGGA 2 cut(s) 262, 676
MroNI GCCGGC 1 cut(s) 5973
MroXI GAANNNNTTC 5 cut(s) 83, 2067, 3785, 3945, 5130
MslI CAYNNNNRTG 6 cut(s) 836, 1419, 1667, 2175, 2642, 5872
MspA1I CMGCKG 8 cut(s) 160, 958, 969, 1645, 2074, 3651, 3755, 5816
MspCI CTTAAG 2 cut(s) 4045, 6178
MspR9I CCNGG 5 cut(s) 475, 476, 5315, 5935, 6490
MunI CAATTG 2 cut(s) 2838, 3051
Mva1269I GAATGC 2 cut(s) 3402, 3979
MvaI CCWGG 3 cut(s) 5315, 5935, 6490
MvnI CGCG 6 cut(s) 50, 95, 324, 650, 3085, 6525
NaeI GCCGGC 1 cut(s) 5975
NciI CCSGG 2 cut(s) 475, 476
NcoI CCATGG 3 cut(s) 756, 4380, 5769
NdeI CATATG 3 cut(s) 2370, 5269, 5538
NgoMIV GCCGGC 1 cut(s) 5973
NheI GCTAGC 3 cut(s) 529, 2197, 5969
NlaIV GGNNCC 5 cut(s) 345, 1023, 1846, 5857, 6574
NmeAIII GCCGAG 2 cut(s) 332, 6153
NmuCI GTSAC 6 cut(s) 1610, 1736, 2483, 3416, 4682, 5733
NruI TCGCGA 1 cut(s) 50
NsiI ATGCAT 1 cut(s) 5879
NspI RCATGY 9 cut(s) 711, 796, 1212, 1424, 3208, 3532, 4070, 4893, 5720
NspV TTCGAA 2 cut(s) 87, 580
PaeI GCATGC 4 cut(s) 711, 3208, 4070, 5720
PaeR7I CTCGAG 3 cut(s) 986, 1687, 4982
PagI TCATGA 3 cut(s) 2313, 3760, 5617
PaqCI CACCTGC 1 cut(s) 559
PciI ACATGT 2 cut(s) 1208, 1420
PciSI GCTCTTC 2 cut(s) 3791, 5085
PcsI WCGNNNNNNNCGW 1 cut(s) 6598
PctI GAATGC 2 cut(s) 3402, 3979
PdiI GCCGGC 1 cut(s) 5975
PdmI GAANNNNTTC 5 cut(s) 83, 2067, 3785, 3945, 5130
PflMI CCANNNNNTGG 2 cut(s) 1888, 3163
PinAI ACCGGT 1 cut(s) 6575
PleI GAGTC 7 cut(s) 533, 1754, 2480, 3781, 5210, 5332, 5752
PmaCI CACGTG 1 cut(s) 3851
PmlI CACGTG 1 cut(s) 3851
PpsI GAGTC 7 cut(s) 533, 1754, 2480, 3781, 5210, 5332, 5752
Ppu21I YACGTR 1 cut(s) 3851
PpuMI RGGWCCY 1 cut(s) 2707
PscI ACATGT 2 cut(s) 1208, 1420
PshAI GACNNNNGTC 1 cut(s) 6613
PsiI TTATAA 2 cut(s) 783, 4272
Psp124BI GAGCTC 2 cut(s) 20, 3555
Psp5II RGGWCCY 1 cut(s) 2707
Psp6I CCWGG 3 cut(s) 5313, 5933, 6488
PspCI CACGTG 1 cut(s) 3851
PspFI CCCAGC 4 cut(s) 34, 156, 746, 1557
PspGI CCWGG 3 cut(s) 5313, 5933, 6488
PspN4I GGNNCC 5 cut(s) 345, 1023, 1846, 5857, 6574
PspPI GGNCC 4 cut(s) 375, 1651, 2707, 5236
PspPPI RGGWCCY 1 cut(s) 2707
PstI CTGCAG 6 cut(s) 165, 435, 2531, 4257, 5598, 6016
PstNI CAGNNNCTG 2 cut(s) 574, 2230
PsuI RGATCY 7 cut(s) 148, 1012, 1279, 2930, 4165, 5050, 5575
PvuII CAGCTG 7 cut(s) 160, 958, 969, 1645, 2074, 3651, 5816
RruI TCGCGA 1 cut(s) 50
RseI CAYNNNNRTG 6 cut(s) 836, 1419, 1667, 2175, 2642, 5872
SacI GAGCTC 2 cut(s) 20, 3555
SalI GTCGAC 1 cut(s) 1394
SapI GCTCTTC 2 cut(s) 3791, 5085
Sau96I GGNCC 4 cut(s) 375, 1651, 2707, 5236
ScaI AGTACT 1 cut(s) 3631
SchI GAGTC 7 cut(s) 533, 1754, 2480, 3782, 5211, 5333, 5752
ScrFI CCNGG 5 cut(s) 475, 476, 5315, 5935, 6490
SduI GDGCHC 5 cut(s) 20, 1849, 2399, 3555, 3700
SfcI CTRYAG 9 cut(s) 161, 431, 1429, 2527, 3062, 4253, 5594, 6012, 6628
Sfr274I CTCGAG 3 cut(s) 986, 1687, 4982
SfuI TTCGAA 2 cut(s) 87, 580
SgrAI CRCCGGYG 1 cut(s) 6575
SinI GGWCC 3 cut(s) 375, 2707, 5236
SlaI CTCGAG 3 cut(s) 986, 1687, 4982
SmaI CCCGGG 1 cut(s) 476
SmiMI CAYNNNNRTG 6 cut(s) 836, 1419, 1667, 2175, 2642, 5872
SpeI ACTAGT 3 cut(s) 3413, 4628, 6115
SphI GCATGC 4 cut(s) 711, 3208, 4070, 5720
SspI AATATT 1 cut(s) 2453
SstI GAGCTC 2 cut(s) 20, 3555
StyD4I CCNGG 5 cut(s) 473, 474, 5313, 5933, 6488
StyI CCWWGG 6 cut(s) 305, 756, 2418, 4104, 4380, 5769
TaiI ACGT 8 cut(s) 48, 2664, 3647, 3853, 4228, 5735, 6108, 6617
TatI WGTACW 4 cut(s) 435, 963, 3629, 5751
TauI GCSGC 1 cut(s) 6424
TseFI GTSAC 6 cut(s) 1610, 1736, 2483, 3416, 4682, 5733
Tsp45I GTSAC 6 cut(s) 1610, 1736, 2483, 3416, 4682, 5733
TspGWI ACGGA 6 cut(s) 2021, 3368, 4762, 5290, 5921, 6638
TspMI CCCGGG 1 cut(s) 474
Van91I CCANNNNNTGG 2 cut(s) 1888, 3163
Vha464I CTTAAG 2 cut(s) 4045, 6178
VpaK11BI GGWCC 3 cut(s) 375, 2707, 5236
XagI CCTNNNNNAGG 3 cut(s) 1133, 2714, 5231
XbaI TCTAGA 2 cut(s) 464, 2927
XceI RCATGY 9 cut(s) 711, 796, 1212, 1424, 3208, 3532, 4070, 4893, 5720
XcmI CCANNNNNNNNNTGG 3 cut(s) 2293, 3031, 5410
XhoI CTCGAG 3 cut(s) 986, 1687, 4982
XmaI CCCGGG 1 cut(s) 474
XmaJI CCTAGG 1 cut(s) 305
XmiI GTMKAC 2 cut(s) 1395, 5513
XmnI GAANNNNTTC 5 cut(s) 83, 2067, 3785, 3945, 5130
ZraI GACGTC 2 cut(s) 3645, 5733
ZrmI AGTACT 1 cut(s) 3631
Zsp2I ATGCAT 1 cut(s) 5879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.