Rroxscaffold_5G00368740
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
50483912 .. 50495726
11815 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00368740.1

Sequence Viewer

Length: 6252 bp
ATGTCGAAGGAGAGCTCAACGGCACGATTCCCAGCCCGAAACGTTTCGAGGACGCAGCAGCCGGAGCCTAACGAGAACGAGTTCGAAACGCCGGCGAATCCAATCCAATTTCCGCCTCCGAGGACGCCTCTGAACAGCATAGCAGATCCAGCGCAATTGCAGAAGGAGTTTCTCGAACTCGATTTGGATTCGCATCCGAAGCTCGAAGCCGTTAGATCCGGTAGGTTTTCTTTATCGGAGAGAAGGCTCGAGGCTTTGGATAAAGGTGGAAATGCCGGTCTCAGCTTCGGAACTCCTAGGGTTTCAGGCAGAGGAGGAAAGGCGCATTCGGAGCCTAACTCGGCGCAAAGCACTCCGGCGAGAAATCGAGCTTCGATTGGAGGTTGTGCAATTTTGACTCAAGTACCGCATTTTGAGCTTGTTGAAGACTCGTCGTTTTGGACTGATCACAATGTGCAGGTACTGATTCGAATTCGGCCATTGAGTAGTATGGAGAGGGCTTTGCAAGGGTGTGGTAGGTGTTTGAAGCAGGAGAGCTCACAAACTTTGGTGTTGCATGGTCCTCCTGAAGCTAGATTCACATTTGATCATATTGCATGCGAGATGATATCACAGGAAAAGCTGTTCAAGGTTGCAGGAATGCCCATGGTGGAGAATTGCTTGTCTGGTTATAATAGCTGTATGTTCGCCTACGGTCAGACAGGTAGTGGCAAAACGTACACAATGATGGGTGAGATATATGAGATTGAGGGACAACTCAATGACGATTGTGGGATTACTCCACGCATTTTTGAATATTTGTTCAAGAGGATTAGAATGGAAGAGGAGAACAGGAGAGAGGAACAGCTGAAGTATAGCTGCAAATGTTCCTTTCTCGAGATTTACAATGAGCAGATAACAGATCTCTTGGAGCCTTCATCAACTAATCTACAACTCAGGGAGGACTTGAAGAAAGGGGTTTACGTTGAAAACCTTACAGAATACAATGTGACAAATGTTAATGATGTTGTCAAGCTTCTGTTACATGGTGCTTCGAACAGAAAAATGGCAGCTACACACATGAACAGCGAGAGCAGCCGCTCACATAGTGTTTTCACTTGTATCATTGAAAGTCGTTGGGAAAACAATTCCATGACTCATTTTAGATTTGCAAGGTTGAATTTAGTAGATCTAGCTGGTTCAGAGAGGCAGAAAGGCTCTGGTGCAGAGGGAGATCGTTTGAAAGAAGCAGCAAATATAAACAAATCGTTATCAACTCTTGGGTTGGTGATAATGTCTCTAGTTGATTTAGCGCATGGAAAGCAGAGACATGTTCCTTATAGAGATTCAAGGCTCACGTTTCTGCTTCAGGATTCTCTGGGTGGGAACTCTAAAACAACTATAATTGCAAATGCTAAAGTGAATGAAGATGCTTCAGGTGACATAACTGCTCTTCAGCGACACATCCAACAGCTAAAGGCATGGATTGCATTTGGCCAGTTGTCCTTTCTGATGAAGCATCATAACCTCTCATGGCCTTCATCAAGTTGTGCCCCAAGTATTGAAGAACCTAGACGCGGTGACTTGCCTGAGGAAGACAACTGTATAGGAGAGAAAACGGAAACTGATAGTCATAAGATGTCAAGTGTCCAAAACAAGAAGTTGAAATGCATGGAAGCCATTTTGGTTGGTGCCCTGAGAAGGGAAAAGATGGCAGACAATGCACTACAGAATTTGGTGGCTGAAATTGAACATATGAACCGTTTGGCCTGTGAAAGAGAGGAGGATGCTAGACATACTAAAATAATGCTAAGGTCTCGTGATGAGAAAATTAAAAGACTTGAGTTGTTGGTGGATGGAATGTTGTCTGCTGAGAAGTATCTCATGGAAGAGAACAAAGCTTTGCTAGAAGAGATGCAGATGCTTCAAACAGGACCTGATGGAAATCCAGAATTGACCCGATATGCTGTGGAGAACAGTAGACTTCTTGAGCAACTTCAATTGTATCAAAAATTTTACGAACACGGAGAGCGAGAAACATTGCTAGCTGAAGTATCAGAATTACGTAATCAGTTTCTGGATATCCTTCAAAAAAAGCTTCCATTCTCAAGTGAAAATGAAAGTCAGAATAGTGATATCAGAAAGGAATTGGAAGATTGCAGGGGCATGAACTCTAAGCTGATTAGGGAAGTAGATGAACTACAATTAGAAATGAGAAAGTACATGAGCTCCAGTCAAGCTGCATCTGACTCTGTCAGAAATTCTTTCTCCAAGGGTGCTGAGGAGTTCAGGCAATCAGATAAATATTCAATGGTGGAAACCTTATCTGTGCGAAGCGACTCTGGAGATGAAATGGCATCTTATACCGATGCAGATGATGAGGCTTTACAGAATCATGTGATTCATAACCAAAATGGTGATGATAGTCGAAAGAAGTTGATGGATGCTAAAATGTTGACTGAGGCAGGGAAGTCTGAGCAGGCTTGTTTGAAATCATGTGATTTTCATAAGGAAAGCATGGGTTTGCTGATGGATAGCAGTAAAGATGTTGAGAGGAAAGCTTTACAAGCCAAATTGGACAAAATGGCTAAGGACCTGGAGGAGGTCAAATCACTTAATAGCCACTTTCAAGAAGATAAGCTATTACAGTTGTCTTGCCAGAAACAAACTGAAATGGTTTGTGAACAGGTTGAGATCGAGACGGCAAGAACAATTCTTCATTTACAGGAAGAGGTTGCTGCCCTTCAGCTTGAACTTGATGAAAAATTACAGGGCATGATTCAGGAAAATACTACATTGAAAAATACCATAGCATCTAAAGAGGATGAAATAAGGACGCTGAAAATGGATTGGGAAAAGGCAACCTTAGAACTAACAAGGTTCCTTCTTGATGGTTCTAGATCCCTCAAAAATGCATCCAGCCAAATAAAAAGGATCACCCACTCATTTCCTCAAGCTAATGTTTGTATTAGTGAAAATGTTCAGAGGGCTGCCAAAGTTTGCTTGGAAAAGGAAGAAACGATTATATTACTGCAAAAGAGCTTGGAAGATGCACAAAACATGGTAACAGAAATGGGACAGAAGTTAAGTTCCTTGAAGGGAGCAACAATGGCTTTAAGTGAACTCCAGCATCTGAATAGTGATGAAAAAATGAAGTCTAAAGATCTTCATCACTTGATACATGAAATAAAAAATGCGCTTACTGTAGCAAATGGTAGATTGAAAAATATTGAAGATTTTGTTTACATGTGCCCTTCAGGAGACGAAGATGAGTGGAGTACTGATAGTTCCATGTCAAGCTGTGATACTTCATCTGAAAGTATTTCTTCTGGACATGTATTGTGGACAATGGAAGGGCATTTAGGGGACCTAAAAGTTGAAGAAGGCCCAGTACTTCAGTCTGCTTATCAAGATCCAGAAAAGTCAAACAAGCTGTTAAAAAATTTCACTCAACCTGAAGGAGCATCCTTCTGCCTGAAAAAAGAATTAGAGATAACACTTGATGCTTTTAACACTCTATATGTTCGGTTAGCCTCACTTGTTAGTGAGACTGTCAGTGAAAATCATTCTCAAGAAGGAGATGTAAAACAAATTGTTCCACCGTTTAAGCTGAAGACGGAGAGTGCTTATGCAGGTTGTCATACAACAGAAAAGCTAGTTGCTGGTGAGAAAAGTGATTTCACTAGTAGCTTCTTAATCAACTTTGAAGAAGCGCATGCAACAATAAAAGAGGCTGATTTCATGTTAAATGCCTTGCTGGAAGCCAATGAAAATTCAAAACAATTGACTGGGCTGTGGAAGCAAACTGGTGAGGAACTAATGTTAGAGAGAGCAAGCTTTATTAAAGAAGTGGAACATCTCAAATCTTCAGTACTTTTAAAAGAAAGAGAGAACAAGCTGCTGCAAAATCAATCTTATTCTGATTTGGCAGAGATAGAAAAATCAGTGTCTCTGCTTGAAGAGTGTTTCATGCAATTAAAAAGTGATGTCGAGGACAGGTTTAAAGTAATATATGCTGATGTTTTCTCAATGGGGAGTGAGATACGCAACTTTATTAGCAGTTCTAGATCATTCCTAGAGGAAACATGCTCTGAGACATTGGAGAAAGAATTTGCCATGTTTGTGCTTCATCAGTGTCTAAGAGGAGAGCTGGTCCCCAATATGTCATGTGCTAATTTAGATAATGATTATCGGCAATTCAGGAAGCAAGAAGGATGTTCAGAGATGAATAAACTGCATAAGATCTGGTCAAGTGGTGAGGAGAGCACCATGCTTATTAGTACCCTCTCCATAGATGATGGGGATCAACGTGAAGTTGTCACCAACTTGAAAGAAAGCGAGTGCGGTCTCTCCCATGATACTTTGATACATGAGAACTTAGTACTGAAGGAAGAATTGGAAAGGAAGGAAGCTCTACTAGAGGGCGTGCATTTTGATTTTAGAACGTTGCAGGAATCAGCATCCAACACAAAGGATATAAAGGACGAAACTGAAAAGCTGATACAATCGTTGAGCCAAATTCAGCTTGAACTGGAAATGAAAACATGCCACCTTGATGACATGTTGGTTGAACATAGAAAACTTGAGGATCATCTGACTAATACTGAAAAGGCTTTGCTTATATCAAATTCTAATCTTGAGCAGGCCAATGAAACAGTTGATACTCTTTCAGAGCAAAACATTGAGTTGAAAGTGCTTCTAAAAGATCTCTATCTCAACAAAGTTGAAGCTGAAGAACAACTGGAAGAGCAGAAGGAGGTGGTAAAAGGTTTGGAAAAAGAAATTCTACATTTGAATTCTTCGATGGAAGAAAAAGTACTCTGTTCAGTTGAAGGTATTCAGGGTGAGTTGAGAAAGGCTATCGGTGAAAGAGATCGACTACATGAGGAAGTTCAGTCCTTGAATGATAAACTTGAGATGGCATGTGCAATAGCTGATGAAAACGAAGCTATCTCTGTTGAAGCTCGCCAGGAAGCTGAGACAAGTAAGATGGATGCCAAACAAAAAGAAGAGGAAGTTAAGATCTTAGAACACTCTGTTGAGGAGCTTGAATGCACCATCAATGTACTAGAAAAAAAGGTGTATGAGATGGATGATGAGGTAGAAAGACATCGATTGATCAGAGATGCATTAGAACTGGAACTCCAAGCTTTAAGACAGAGATTATCAACAGTTGAAAATTTCACTGAAAATGCGGATTCGGAAAACACAAAAGCTGAAGAAGATGAAGACCTGATATCTAGGCAACTTAAGAGTAAGCTACTGGAACTTCATGAGGCTCATAACAGGATAAAGCTTCTTGAAGAGGAAAGAGCAGAATGGGAAAAAGAGATCAAACAATGCAAGGAATACATCTCTGAACTTGTGTTGCATGCGGAAGCTCAGGCGTCACAGTACCAACAGAAGGCTGTTGCACTTTTTGAACAGTACAAGACTCTTGAGGCCATGGTCTCAGAAGTAAAAGCAGATAAGACATGTTCAACAACCACAGCTGCAACATCAGACAAAACCGAGAGGAGCTCAATCAGGACAAGGGGTTCTGGTTCACCCTTCAGGTGCATATCAACTTTGGTTCAGCAAATGAATATGGAGAAGGATCAGGAATTGTCTACAGCCAGGCTTCGGATTGAGGAACTAGAGGCACTGGCTGCCAGTTGGCAAAAGGAGGTATGTTTGCTGAATACTAGACTAGCAGCAACAGAAAGCATGACACATGATGTCATTCGAGATTTACTTGGTGTCAAATTGGACATGACTAACTATGCAGAGCAAGAAATTCTCAACTTGAGAAAGCAGATAAATGATCTAATGGAGGAAAGACAAAGTTGCAAATCCGAAATAGAAAAAAAAGAAGGGGATATACTGGCTGCTCAGATGTCTGTGCAAGAACTCCAAGAGAGGGATCAAATGCTTTCTGCACAGAATGAGATGTTGAAGACGGACAAGGCCAATCTAAAGAGGAGAGTATCGGAACTGGATGATATGGTAAAAACAATTCTTGGAACACCAAGTACCTGGCATCCAAGTCTTGGAACACCTAGTACCCGGCATCCAAGTCAACAAACATCCACGAACAAGAAAAGTGCATTCAGATTACATGATGGTGATTTTACCAGAAGACTGGAACAGTCTGAGAAGCATCTCTCTCGTGTCAATGGTGAACTTGCTCAATATATCAAATCAGGTGGTGGTCAGGTGCGAGACAAACGCTTCAGTCACGGGTCAGAACTAGACAACAGGAAGCAGAAGAACTCGAGTCTGGATAGAGTATAA

Protein Analysis

2083

Amino Acids

236.72

Weight (kDa)

5.15

Isoelectric Point (pI)

52.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 157 - 469 1.6e-101 Kinesin motor domain
Microtub_bd PF16796 187 - 303 8.8e-20 Microtubule binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 672
Acc36I ACCTGC 2 cut(s) 448, 3602
AccB1I GGYRCC 1 cut(s) 1670
AccB7I CCANNNNNTGG 1 cut(s) 6008
AccBSI CCGCTC 1 cut(s) 1080
AccI GTMKAC 2 cut(s) 1960, 5588
AccII CGCG 1 cut(s) 1557
AciI CCGC 7 cut(s) 113, 407, 1078, 1557, 4323, 5174, 5354
AclI AACGTT 2 cut(s) 42, 4424
AclWI GGATC 9 cut(s) 140, 210, 2874, 2921, 3386, 4290, 4575, 5583, 5889
AcoI YGGCCR 2 cut(s) 476, 1474
AcyI GRCGYC 2 cut(s) 125, 5366
AdeI CACNNNGTG 2 cut(s) 454, 1088
AfiI CCNNNNNNNGG 8 cut(s) 1556, 1680, 1681, 2581, 5383, 5601, 5878, 6008
AflII CTTAAG 1 cut(s) 5228
AflIII ACRYGT 5 cut(s) 1309, 3225, 3313, 4539, 5453
AhlI ACTAGT 1 cut(s) 3662
AjnI CCWGG 4 cut(s) 2574, 4947, 5594, 5993
AjuI GAANNNNNNNTTGG 2 cut(s) 4358, 4390
AloI GAACNNNNNNTCC 6 cut(s) 608, 640, 5106, 5138, 5500, 5532
Alw21I GWGCWC 5 cut(s) 17, 539, 2210, 4247, 5501
AlwI GGATC 9 cut(s) 140, 210, 2874, 2921, 3386, 4290, 4575, 5583, 5889
AlwNI CAGNNNCTG 4 cut(s) 463, 1916, 2056, 3112
Ama87I CYCGRG 3 cut(s) 248, 875, 6232
AoxI GGCC 8 cut(s) 476, 1474, 1514, 1746, 3364, 4623, 5421, 5925
Asp700I GAANNNNTTC 4 cut(s) 43, 80, 2958, 4815
AspA2I CCTAGG 1 cut(s) 296
AspLEI GCGC 6 cut(s) 154, 325, 346, 1294, 3178, 3694
AspS9I GGNCC 6 cut(s) 560, 1913, 2572, 3346, 3365, 4132
AsuC2I CCSGG 1 cut(s) 6025
AsuII TTCGAA 3 cut(s) 84, 469, 1034
AsuNHI GCTAGC 1 cut(s) 2023
AvaI CYCGRG 3 cut(s) 248, 875, 6232
AvaII GGWCC 5 cut(s) 560, 1913, 2572, 3346, 4132
AvrII CCTAGG 1 cut(s) 296
AxyI CCTNAGG 1 cut(s) 1569
BaeGI GKGCMC 3 cut(s) 1534, 1675, 3233
BaeI ACNNNNGTAYC 4 cut(s) 387, 420, 4472, 4505
BalI TGGCCA 1 cut(s) 1476
BanI GGYRCC 1 cut(s) 1670
BanII GRGCYC 4 cut(s) 17, 539, 2210, 5501
BarI GAAGNNNNNNTAC 6 cut(s) 3354, 3386, 4779, 4811, 5823, 5855
BauI CACGAG 2 cut(s) 1797, 6126
BbsI GAAGAC 6 cut(s) 432, 1581, 3599, 5214, 5921, 6103
Bbv12I GWGCWC 5 cut(s) 17, 539, 2210, 4247, 5501
BbvCI CCTCAGC 1 cut(s) 2259
BceAI ACGGC 3 cut(s) 36, 194, 2697
BcgI CGANNNNNNTGC 2 cut(s) 6107, 6141
BciT130I CCWGG 4 cut(s) 2576, 4949, 5596, 5995
BclI TGATCA 3 cut(s) 445, 586, 5097
BcnI CCSGG 1 cut(s) 6025
BcuI ACTAGT 1 cut(s) 3662
BfmI CTRYAG 3 cut(s) 1706, 3183, 5589
BfrI CTTAAG 1 cut(s) 5228
BfuAI ACCTGC 2 cut(s) 448, 3602
BglII AGATCT 6 cut(s) 901, 1168, 3142, 4221, 4684, 5001
BlnI CCTAGG 1 cut(s) 296
BmcAI AGTACT 5 cut(s) 3259, 3372, 3852, 4362, 4797
Bme1390I CCNGG 5 cut(s) 2576, 4949, 5596, 5995, 6025
Bme18I GGWCC 5 cut(s) 560, 1913, 2572, 3346, 4132
BmeT110I CYCGRG 3 cut(s) 248, 875, 6232
BmgT120I GGNCC 6 cut(s) 560, 1913, 2572, 3346, 3365, 4132
BmiI GGNNCC 7 cut(s) 66, 333, 912, 1672, 2861, 3347, 4134
BmrFI CCNGG 5 cut(s) 2576, 4949, 5596, 5995, 6025
BmrI ACTGGG 2 cut(s) 3362, 3777
BmtI GCTAGC 1 cut(s) 2027
BmuI ACTGGG 2 cut(s) 3362, 3777
BpiI GAAGAC 6 cut(s) 432, 1581, 3599, 5214, 5921, 6103
BplI GAGNNNNNCTC 6 cut(s) 112, 144, 323, 355, 5483, 5515
BpmI CTGGAG 4 cut(s) 2194, 2343, 2597, 3089
Bpu10I CCTNAGC 4 cut(s) 1790, 2259, 2568, 5361
Bpu14I TTCGAA 3 cut(s) 84, 469, 1034
BpuMI CCSGG 1 cut(s) 6025
Bsa29I ATCGAT 1 cut(s) 5092
BsaAI YACGTR 1 cut(s) 2045
BsaBI GATNNNNATC 5 cut(s) 192, 1923, 3147, 4281, 4689
BsaHI GRCGYC 2 cut(s) 125, 5366
BsaI GGTCTC 4 cut(s) 284, 1800, 4331, 5434
BsaJI CCNNGG 5 cut(s) 119, 296, 645, 2250, 5424
BsaWI WCCGGW 1 cut(s) 218
BsaXI ACNNNNNCTCC 6 cut(s) 2192, 2222, 4116, 4146, 5106, 5136
Bsc4I CCNNNNNNNGG 8 cut(s) 1556, 1680, 1681, 2581, 5383, 5601, 5878, 6008
Bse118I RCCGGY 2 cut(s) 91, 275
Bse21I CCTNAGG 1 cut(s) 1569
Bse3DI GCAATG 1 cut(s) 2018
Bse8I GATNNNNATC 5 cut(s) 192, 1923, 3147, 4281, 4689
BseBI CCWGG 4 cut(s) 2576, 4949, 5596, 5995
BseCI ATCGAT 1 cut(s) 5092
BseDI CCNNGG 5 cut(s) 119, 296, 645, 2250, 5424
BseJI GATNNNNATC 5 cut(s) 192, 1923, 3147, 4281, 4689
BseLI CCNNNNNNNGG 8 cut(s) 1556, 1680, 1681, 2581, 5383, 5601, 5878, 6008
BseMI GCAATG 1 cut(s) 2018
BseSI GKGCMC 3 cut(s) 1534, 1675, 3233
BseYI CCCAGC 1 cut(s) 31
BsgI GTGCAG 3 cut(s) 476, 1224, 5880
Bsh1236I CGCG 1 cut(s) 1557
BshFI GGCC 8 cut(s) 478, 1476, 1516, 1748, 3366, 4625, 5423, 5927
BshNI GGYRCC 1 cut(s) 1670
BshVI ATCGAT 1 cut(s) 5092
BsiHKAI GWGCWC 5 cut(s) 17, 539, 2210, 4247, 5501
BsiHKCI CYCGRG 3 cut(s) 248, 875, 6232
BsiSI CCGG 6 cut(s) 62, 92, 219, 276, 356, 6025
BslFI GGGAC 4 cut(s) 765, 3069, 3359, 4118
BslI CCNNNNNNNGG 8 cut(s) 1556, 1680, 1681, 2581, 5383, 5601, 5878, 6008
BsmBI CGTCTC 2 cut(s) 2672, 3234
BsmFI GGGAC 4 cut(s) 765, 3069, 3359, 4118
BsmI GAATGC 4 cut(s) 325, 645, 5036, 6065
BsnI GGCC 8 cut(s) 478, 1476, 1516, 1748, 3366, 4625, 5423, 5927
Bso31I GGTCTC 4 cut(s) 284, 1800, 4331, 5434
BsoBI CYCGRG 3 cut(s) 248, 875, 6232
Bsp119I TTCGAA 3 cut(s) 84, 469, 1034
Bsp1286I GDGCHC 8 cut(s) 17, 539, 1534, 1675, 2210, 3233, 4247, 5501
Bsp19I CCATGG 2 cut(s) 645, 5424
BspACI CCGC 7 cut(s) 113, 407, 1078, 1557, 4323, 5174, 5354
BspANI GGCC 8 cut(s) 478, 1476, 1516, 1748, 3366, 4625, 5423, 5927
BspDI ATCGAT 1 cut(s) 5092
BspFNI CGCG 1 cut(s) 1557
BspHI TCATGA 1 cut(s) 5251
BspLI GGNNCC 7 cut(s) 66, 333, 912, 1672, 2861, 3347, 4134
BspMI ACCTGC 2 cut(s) 448, 3602
BspOI GCTAGC 1 cut(s) 2027
BspPI GGATC 9 cut(s) 140, 210, 2874, 2921, 3386, 4290, 4575, 5583, 5889
BspQI GCTCTTC 2 cut(s) 1437, 4719
BspT104I TTCGAA 3 cut(s) 84, 469, 1034
BspT107I GGYRCC 1 cut(s) 1670
BspTI CTTAAG 1 cut(s) 5228
BspTNI GGTCTC 4 cut(s) 284, 1800, 4331, 5434
BsrBI CCGCTC 1 cut(s) 1080
BsrDI GCAATG 1 cut(s) 2018
BsrFI RCCGGY 2 cut(s) 91, 275
BssAI RCCGGY 2 cut(s) 91, 275
BssECI CCNNGG 5 cut(s) 119, 296, 645, 2250, 5424
BssNI GRCGYC 2 cut(s) 125, 5366
BssSI CACGAG 2 cut(s) 1797, 6126
BssT1I CCWWGG 4 cut(s) 296, 645, 2250, 5424
Bst2BI CACGAG 2 cut(s) 1797, 6126
Bst2UI CCWGG 4 cut(s) 2576, 4949, 5596, 5995
Bst6I CTCTTC 9 cut(s) 816, 1437, 1863, 1884, 2703, 3933, 4719, 4983, 5277
BstACI GRCGYC 2 cut(s) 125, 5366
BstAFI CTTAAG 1 cut(s) 5228
BstAPI GCANNNNNTGC 3 cut(s) 1466, 1700, 5627
BstBAI YACGTR 1 cut(s) 2045
BstBI TTCGAA 3 cut(s) 84, 469, 1034
BstDSI CCRYGG 2 cut(s) 645, 5424
BstENI CCTNNNNNAGG 1 cut(s) 2579
BstFNI CGCG 1 cut(s) 1557
BstHHI GCGC 6 cut(s) 154, 325, 346, 1294, 3178, 3694
BstNI CCWGG 4 cut(s) 2576, 4949, 5596, 5995
BstSCI CCNGG 5 cut(s) 2574, 4947, 5594, 5993, 6023
BstSFI CTRYAG 3 cut(s) 1706, 3183, 5589
BstSLI GKGCMC 3 cut(s) 1534, 1675, 3233
BstSNI TACGTA 1 cut(s) 2045
BstUI CGCG 1 cut(s) 1557
BstV2I GAAGAC 6 cut(s) 432, 1581, 3599, 5214, 5921, 6103
BstXI CCANNNNNNTGG 2 cut(s) 5994, 6100
Bsu15I ATCGAT 1 cut(s) 5092
Bsu36I CCTNAGG 1 cut(s) 1569
BsuRI GGCC 8 cut(s) 478, 1476, 1516, 1748, 3366, 4625, 5423, 5927
BsuTUI ATCGAT 1 cut(s) 5092
BtgI CCRYGG 2 cut(s) 645, 5424
BtsIMutI CAGTG 5 cut(s) 3541, 3930, 4118, 5163, 5621
BveI ACCTGC 2 cut(s) 448, 3602
CaiI CAGNNNCTG 4 cut(s) 463, 1916, 2056, 3112
CciI TCATGA 1 cut(s) 5251
CfoI GCGC 6 cut(s) 154, 325, 346, 1294, 3178, 3694
Cfr10I RCCGGY 2 cut(s) 91, 275
Cfr13I GGNCC 6 cut(s) 560, 1913, 2572, 3346, 3365, 4132
ClaI ATCGAT 1 cut(s) 5092
CseI GACGC 5 cut(s) 61, 133, 1563, 2824, 5355
CspCI CAANNNNNGTGG 2 cut(s) 6145, 6180
DraI TTTAAA 2 cut(s) 3858, 3982
DraIII CACNNNGTG 2 cut(s) 454, 1088
EaeI YGGCCR 2 cut(s) 476, 1474
Eam1104I CTCTTC 9 cut(s) 816, 1437, 1863, 1884, 2703, 3933, 4719, 4983, 5277
EarI CTCTTC 9 cut(s) 816, 1437, 1863, 1884, 2703, 3933, 4719, 4983, 5277
EciI GGCGGA 1 cut(s) 102
Ecl136II GAGCTC 4 cut(s) 15, 537, 2208, 5499
Eco105I TACGTA 1 cut(s) 2045
Eco130I CCWWGG 4 cut(s) 296, 645, 2250, 5424
Eco24I GRGCYC 4 cut(s) 17, 539, 2210, 5501
Eco31I GGTCTC 4 cut(s) 284, 1800, 4331, 5434
Eco32I GATATC 4 cut(s) 609, 2062, 2116, 5217
Eco47I GGWCC 5 cut(s) 560, 1913, 2572, 3346, 4132
Eco53kI GAGCTC 4 cut(s) 15, 537, 2208, 5499
Eco81I CCTNAGG 1 cut(s) 1569
Eco88I CYCGRG 3 cut(s) 248, 875, 6232
EcoICRI GAGCTC 4 cut(s) 15, 537, 2208, 5499
EcoNI CCTNNNNNAGG 1 cut(s) 2579
EcoO109I RGGNCCY 3 cut(s) 1913, 2572, 3346
EcoRI GAATTC 2 cut(s) 471, 4774
EcoRII CCWGG 4 cut(s) 2574, 4947, 5594, 5993
EcoRV GATATC 4 cut(s) 609, 2062, 2116, 5217
EcoT14I CCWWGG 4 cut(s) 296, 645, 2250, 5424
EcoT22I ATGCAT 3 cut(s) 1652, 2896, 5110
EcoT38I GRGCYC 4 cut(s) 17, 539, 2210, 5501
ErhI CCWWGG 4 cut(s) 296, 645, 2250, 5424
Esp3I CGTCTC 2 cut(s) 2672, 3234
FalI AAGNNNNNCTT 4 cut(s) 2828, 2860, 3289, 3321
FaqI GGGAC 4 cut(s) 765, 3069, 3359, 4118
FauNDI CATATG 1 cut(s) 1734
FbaI TGATCA 3 cut(s) 445, 586, 5097
FblI GTMKAC 2 cut(s) 1960, 5588
FriOI GRGCYC 4 cut(s) 17, 539, 2210, 5501
GlaI GCGC 6 cut(s) 153, 324, 345, 1293, 3177, 3693
GsaI CCCAGC 1 cut(s) 35
GsuI CTGGAG 4 cut(s) 2194, 2343, 2597, 3089
HaeIII GGCC 8 cut(s) 478, 1476, 1516, 1748, 3366, 4625, 5423, 5927
HapII CCGG 6 cut(s) 62, 92, 219, 276, 356, 6025
HgaI GACGC 5 cut(s) 61, 133, 1563, 2824, 5355
HhaI GCGC 6 cut(s) 154, 325, 346, 1294, 3178, 3694
Hin1I GRCGYC 2 cut(s) 125, 5366
Hin6I GCGC 6 cut(s) 152, 323, 344, 1292, 3176, 3692
HinP1I GCGC 6 cut(s) 152, 323, 344, 1292, 3176, 3692
HincII GTYRAC 2 cut(s) 2436, 6038
HindII GTYRAC 2 cut(s) 2436, 6038
HindIII AAGCTT 7 cut(s) 1013, 1878, 2075, 2538, 3814, 5127, 5273
HpaII CCGG 6 cut(s) 62, 92, 219, 276, 356, 6025
Hpy99I CGWCG 1 cut(s) 436
HpyCH4IV ACGT 7 cut(s) 42, 716, 963, 1337, 2044, 4288, 4424
HpySE526I ACGT 7 cut(s) 42, 716, 963, 1337, 2044, 4288, 4424
Hsp92I GRCGYC 2 cut(s) 125, 5366
HspAI GCGC 6 cut(s) 152, 323, 344, 1292, 3176, 3692
KroI GCCGGC 1 cut(s) 91
KroNI GCCGGC 1 cut(s) 93
Ksp22I TGATCA 3 cut(s) 445, 586, 5097
LguI GCTCTTC 2 cut(s) 1437, 4719
LmnI GCTCC 8 cut(s) 64, 331, 910, 2213, 3080, 3440, 5023, 5496
MaeII ACGT 7 cut(s) 42, 716, 963, 1337, 2044, 4288, 4424
MaeIII GTNAC 8 cut(s) 988, 1020, 1418, 1559, 3043, 4297, 5367, 6194
MbiI CCGCTC 1 cut(s) 1080
MfeI CAATTG 3 cut(s) 155, 1979, 3761
MhlI GDGCHC 8 cut(s) 17, 539, 1534, 1675, 2210, 3233, 4247, 5501
MlsI TGGCCA 1 cut(s) 1476
MluNI TGGCCA 1 cut(s) 1476
MlyI GAGTC 7 cut(s) 391, 422, 1129, 2222, 2312, 5407, 6244
MmeI TCCRAC 2 cut(s) 1471, 4467
Mox20I TGGCCA 1 cut(s) 1476
Mph1103I ATGCAT 3 cut(s) 1652, 2896, 5110
MreI CGCCGGCG 1 cut(s) 91
MroNI GCCGGC 1 cut(s) 91
MroXI GAANNNNTTC 4 cut(s) 43, 80, 2958, 4815
MscI TGGCCA 1 cut(s) 1476
MslI CAYNNNNRTG 4 cut(s) 725, 4100, 4533, 6081
Msp20I TGGCCA 1 cut(s) 1476
MspA1I CMGCKG 2 cut(s) 847, 5471
MspCI CTTAAG 1 cut(s) 5228
MspI CCGG 6 cut(s) 62, 92, 219, 276, 356, 6025
MspR9I CCNGG 5 cut(s) 2576, 4949, 5596, 5995, 6025
MunI CAATTG 3 cut(s) 155, 1979, 3761
Mva1269I GAATGC 4 cut(s) 325, 645, 5036, 6065
MvaI CCWGG 4 cut(s) 2576, 4949, 5596, 5995
MvnI CGCG 1 cut(s) 1557
NaeI GCCGGC 1 cut(s) 93
NciI CCSGG 1 cut(s) 6025
NcoI CCATGG 2 cut(s) 645, 5424
NdeI CATATG 1 cut(s) 1734
NgoMIV GCCGGC 1 cut(s) 91
NheI GCTAGC 1 cut(s) 2023
NlaIV GGNNCC 7 cut(s) 66, 333, 912, 1672, 2861, 3347, 4134
NmeAIII GCCGAG 1 cut(s) 320
NmuCI GTSAC 6 cut(s) 988, 1418, 1559, 4297, 5367, 6194
NsiI ATGCAT 3 cut(s) 1652, 2896, 5110
NspV TTCGAA 3 cut(s) 84, 469, 1034
PaeI GCATGC 3 cut(s) 600, 3698, 5354
PaeR7I CTCGAG 3 cut(s) 248, 875, 6232
PagI TCATGA 1 cut(s) 5251
PciI ACATGT 5 cut(s) 1309, 3225, 3313, 4539, 5453
PciSI GCTCTTC 2 cut(s) 1437, 4719
PctI GAATGC 4 cut(s) 325, 645, 5036, 6065
PdiI GCCGGC 1 cut(s) 93
PdmI GAANNNNTTC 4 cut(s) 43, 80, 2958, 4815
PflFI GACNNNGTC 1 cut(s) 2231
PflMI CCANNNNNTGG 1 cut(s) 6008
PleI GAGTC 7 cut(s) 391, 422, 1129, 2222, 2312, 5407, 6243
PpsI GAGTC 7 cut(s) 391, 422, 1129, 2222, 2312, 5407, 6243
Ppu21I YACGTR 1 cut(s) 2045
PpuMI RGGWCCY 3 cut(s) 1913, 2572, 3346
PscI ACATGT 5 cut(s) 1309, 3225, 3313, 4539, 5453
PsiI TTATAA 1 cut(s) 672
Psp124BI GAGCTC 4 cut(s) 17, 539, 2210, 5501
Psp1406I AACGTT 2 cut(s) 42, 4424
Psp5II RGGWCCY 3 cut(s) 1913, 2572, 3346
Psp6I CCWGG 4 cut(s) 2574, 4947, 5594, 5993
PspFI CCCAGC 1 cut(s) 31
PspGI CCWGG 4 cut(s) 2574, 4947, 5594, 5993
PspN4I GGNNCC 7 cut(s) 66, 333, 912, 1672, 2861, 3347, 4134
PspPI GGNCC 6 cut(s) 560, 1913, 2572, 3346, 3365, 4132
PspPPI RGGWCCY 3 cut(s) 1913, 2572, 3346
PspXI VCTCGAGB 2 cut(s) 248, 6232
PsrI GAACNNNNNNTAC 6 cut(s) 3250, 3282, 5974, 6004, 6006, 6036
PstNI CAGNNNCTG 4 cut(s) 463, 1916, 2056, 3112
PsyI GACNNNGTC 1 cut(s) 2231
PvuII CAGCTG 2 cut(s) 847, 5471
RseI CAYNNNNRTG 4 cut(s) 725, 4100, 4533, 6081
SacI GAGCTC 4 cut(s) 17, 539, 2210, 5501
SapI GCTCTTC 2 cut(s) 1437, 4719
Sau96I GGNCC 6 cut(s) 560, 1913, 2572, 3346, 3365, 4132
ScaI AGTACT 5 cut(s) 3259, 3372, 3852, 4362, 4797
SchI GAGTC 7 cut(s) 391, 422, 1129, 2222, 2312, 5407, 6244
ScrFI CCNGG 5 cut(s) 2576, 4949, 5596, 5995, 6025
SduI GDGCHC 8 cut(s) 17, 539, 1534, 1675, 2210, 3233, 4247, 5501
SfcI CTRYAG 3 cut(s) 1706, 3183, 5589
Sfr274I CTCGAG 3 cut(s) 248, 875, 6232
SfuI TTCGAA 3 cut(s) 84, 469, 1034
SgrAI CRCCGGYG 1 cut(s) 91
SinI GGWCC 5 cut(s) 560, 1913, 2572, 3346, 4132
SlaI CTCGAG 3 cut(s) 248, 875, 6232
SmiMI CAYNNNNRTG 4 cut(s) 725, 4100, 4533, 6081
SnaBI TACGTA 1 cut(s) 2045
SpeI ACTAGT 1 cut(s) 3662
SphI GCATGC 3 cut(s) 600, 3698, 5354
SsiI CCGC 7 cut(s) 113, 407, 1078, 1557, 4323, 5174, 5354
SspI AATATT 3 cut(s) 797, 2285, 3208
SstI GAGCTC 4 cut(s) 17, 539, 2210, 5501
StyD4I CCNGG 5 cut(s) 2574, 4947, 5594, 5993, 6023
StyI CCWWGG 4 cut(s) 296, 645, 2250, 5424
TaiI ACGT 7 cut(s) 45, 719, 966, 1340, 2047, 4291, 4427
TatI WGTACW 8 cut(s) 2199, 3257, 3370, 3850, 4360, 4795, 5044, 5406
TauI GCSGC 1 cut(s) 1080
TscAI CASTG 5 cut(s) 3541, 3930, 4118, 5170, 5628
TseFI GTSAC 6 cut(s) 988, 1418, 1559, 4297, 5367, 6194
Tsp45I GTSAC 6 cut(s) 988, 1418, 1559, 4297, 5367, 6194
TspGWI ACGGA 4 cut(s) 1613, 2019, 3611, 5933
TspRI CASTG 5 cut(s) 3541, 3930, 4118, 5170, 5628
Tth111I GACNNNGTC 1 cut(s) 2231
Van91I CCANNNNNTGG 1 cut(s) 6008
Vha464I CTTAAG 1 cut(s) 5228
VpaK11BI GGWCC 5 cut(s) 560, 1913, 2572, 3346, 4132
XagI CCTNNNNNAGG 1 cut(s) 2579
XbaI TCTAGA 2 cut(s) 2876, 4043
XcmI CCANNNNNNNNNTGG 1 cut(s) 2980
XhoI CTCGAG 3 cut(s) 248, 875, 6232
XmaJI CCTAGG 1 cut(s) 296
XmiI GTMKAC 2 cut(s) 1960, 5588
XmnI GAANNNNTTC 4 cut(s) 43, 80, 2958, 4815
ZrmI AGTACT 5 cut(s) 3259, 3372, 3852, 4362, 4797
Zsp2I ATGCAT 3 cut(s) 1652, 2896, 5110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.