MD17G1011100.v1.1

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0016909
Physical Location & Seq
Forward (+)
683081 .. 685871
2791 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1011100.v1.1.491

Sequence Viewer

Length: 2118 bp
ATGATCAATGCTCTTTCTGGGAGCATGGAGTCTGTCAAGAGTGAGAACTCATGCACCTCCGACCTCAAACCGCCGTCTCCGACGGAATCCACGACGATGTCTATGTCCATCTCAGAATGTAAGAAAACCACCACTCCTCCATCCTCAGAGCTGGATCAGCAAAGCAGCTTAACTCCGCTGAGCCTTAACTTTCCGACGCTCAAGTTCGAGCTAGACGATGTTGAAGTCCAATCTCCCGACCATTCCATCTGGGATTCTTTGTTCTCCGAACAATTCGATACAGATTTCATGGTCTTATCGCCCGTCCCAAACAACATGCCGAACTCGCCCCAAAACGGTGGTTCAGCAACTCATCAGAATTACAATTACAATTACAATTACGCTCAGTCCATGCAAGGGCAGAGCCTCTCGGGCTGCTCTCCCACTAGATTTTCGCCGCATCTCGGAGCGTTCAGCAGCACGCACAACCCTAAGGGCAAGGGACTCAGCCCGCTCCGTAGGGTTTTCAACTCTCCTGTCAACCAATACATGCAGCCCGCTGATCAGAACATGCAGTCACTCCCTGTTTCCATCGAAGACTTCTTGGACGATTATCAACGTGACGGATTCATAGTCGCCTACCCGACAACAACATCGTCCAAGATGTCAGGAAGCTCGTCGCAGTTTTACAATCATCACGATCATTTGCCAGCATCATCGACAGTTCCATCCGCCACGTTGGACTGCATGCCGATACATAACTCTTCGAGGTTTAGCAGATCGGAGAGCGAAGCGTCGTTGGTTACCGCTGGTAATTCTCAGCTGACCCAAGAGAGCAGCAGGGGAAGTGGCTATCAGCAGATGGGCGGTGCGCCACTTTCACAACAATTGCAACAAGAACGCATGCAAGAGAAGCAGCAACAGCCGCTGATGCAGCCGCACAAACACCACCAACACCAACACCAACAACAACAGAACCTGCATTACAATATGATGCCGCCTATGGCACATGAGCAGGAACAAGATAGCGGGCTCCAACTGGTTCACCTCCTTCTTGCATGCGCCGAGGCGGTTGCAAAAGAAGACTACATGTTAGCAAGAAGGTACCTTCACCACCTGAACCGAGTGGTGACACCACTCGGCGATTCCATGCAGCGTGTCGCTTCTTGCTTCACAGAAGCTCTAAGCGCACGCTTGGCCGCCACTCTAACCACAACCCCTAGCGGTTCCGCCTCGAAACCCTTCTCTCCTTTCCCTCCAAACTCCTTTGAAATCCTCAAAATCTACCAAATAGTCTACCAAGCCTGCCCCTACATCAAATTCGCACACTTCACCGCCAACCAAGCCATCTTCGAGGCGTTCGAGTCCGAAGAACGTGTACACGTCATCGACCTAGATATTCTTCAAGGATATCAGTGGCCAGCTTTCATGCAGGCCTTGGCTGCCCGCCCAGGCGGGGCTCCCTTTCTACGAATAACCGGGGTGGGCCCCTGCATAGAGGGAGTGAAAGAGACAGGCCGGTGTTTGACCGAATTAGCCCTCTCTCTTCACGTCCCATTTGAGTTCCATGCAGTTGGGGAGCAACTTGAAGATCTCAAGCCACACATGTTCAACCGGAGGATTGGCGAAGCGCTGGCTGTGAACACCGTTAACCGACTCCACCGAGTTTCGGTCAATTGCCTAGGGAACTTGCTAGCCATGATCCGTGACCAAGCACCCAACATTGTGACATTGGTGGAACAAGAAGCAAGTCATAACGGGCCCTACTTTTTGGGTAGGTTTCTCGAGGCTTTACATTACTACTCGGCGATTTTTGACTCGTTGGACGCGACATTCCCACCGGACTCTGCACAGAGGGCGAAGGTGGAGCAGTACATATTTGCGCCGGAGATACGCAACATCGTGGCTTGTGAAGGGGTGGAGCGGACGGAGAGGCACGAGAGGTTGGAGAAGTGGAGGAAGGTGATGGAGAGTAAAGGGTTCAAGAGCGTGCCGCTGAGCGCGAACGCGGTGACTCAGTCGAAGATATTGCTAGGGTTGTATTCTTGCGACGGGTATAGGATGACGGAAGACAAAGGTTGCTTGCTCTTGGGGTGGCAAGACAGGTCTATTATGGCTGCTTCTGCATGGAGATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

706

Amino Acids

78.63

Weight (kDa)

5.93

Isoelectric Point (pI)

65.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 340 - 704 1.1e-131 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016909)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g53920
malus_domestica MD09G1007200.v1.1 MD17G1011100.v1.1
prunus_persica Prupe.3G309800_v2.0.a1
pyrus_communis pycom111g00540
rosa_chinensis RchiOBHm_Chr2g0176081
rosa_laevigata RLG00000022379
rosa_multiflora Rmu_sc0009879.1_g000008
rosa_rugosa Rorug02G0590300
rosa_samantha Rh2AG669100 Rh2BG680700 Rh2CG643600 Rh2DG694400
rosa_wichuraiana Rw2G054880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 966
Acc65I GGTACC 1 cut(s) 1083
AccB1I GGYRCC 1 cut(s) 1083
AccBSI CCGCTC 2 cut(s) 493, 1903
AccI GTMKAC 1 cut(s) 1275
AccII CGCG 3 cut(s) 1808, 1982, 1988
AclWI GGATC 2 cut(s) 162, 1675
AcoI YGGCCR 2 cut(s) 1176, 1397
AcsI RAATTY 1 cut(s) 1298
AfaI GTAC 3 cut(s) 1085, 1359, 1853
AfeI AGCGCT 1 cut(s) 1611
AfiI CCNNNNNNNGG 5 cut(s) 335, 396, 443, 1435, 1648
AflIII ACRYGT 4 cut(s) 1068, 1354, 1360, 1584
AgsI TTSAA 7 cut(s) 224, 508, 1250, 1385, 1568, 1591, 1963
AjiI CACGTC 2 cut(s) 1363, 1531
AjnI CCWGG 1 cut(s) 1429
AloI GAACNNNNNNTCC 2 cut(s) 245, 277
AluBI AGCT 7 cut(s) 151, 168, 211, 654, 802, 1160, 1403
AluI AGCT 7 cut(s) 151, 168, 211, 654, 802, 1160, 1403
Alw26I GTCTC 2 cut(s) 81, 1484
AlwI GGATC 2 cut(s) 162, 1675
AlwNI CAGNNNCTG 2 cut(s) 907, 958
Ama87I CYCGRG 2 cut(s) 409, 1763
Aor51HI AGCGCT 1 cut(s) 1611
AoxI GGCC 6 cut(s) 1176, 1397, 1413, 1465, 1495, 1739
ApaI GGGCCC 2 cut(s) 1469, 1743
ApoI RAATTY 1 cut(s) 1298
Asp700I GAANNNNTTC 1 cut(s) 1220
Asp718I GGTACC 1 cut(s) 1083
AspA2I CCTAGG 1 cut(s) 1660
AspLEI GCGC 6 cut(s) 853, 1043, 1169, 1612, 1864, 1982
AspS9I GGNCC 4 cut(s) 1465, 1466, 1739, 1740
AsuC2I CCSGG 1 cut(s) 1459
AsuHPI GGTGA 6 cut(s) 1016, 1082, 1120, 1303, 1954, 2002
AsuNHI GCTAGC 1 cut(s) 1672
AvaI CYCGRG 2 cut(s) 409, 1763
AvrII CCTAGG 1 cut(s) 1660
AxyI CCTNAGG 1 cut(s) 471
BaeGI GKGCMC 2 cut(s) 1469, 1743
BalI TGGCCA 1 cut(s) 1399
BanI GGYRCC 1 cut(s) 1083
BanII GRGCYC 4 cut(s) 1014, 1441, 1469, 1743
BarI GAAGNNNNNNTAC 2 cut(s) 1341, 1373
BauI CACGAG 1 cut(s) 1916
BbsI GAAGAC 3 cut(s) 582, 1068, 2055
BccI CCATC 8 cut(s) 116, 148, 254, 578, 715, 835, 1334, 1939
BceAI ACGGC 1 cut(s) 58
BcgI CGANNNNNNTGC 4 cut(s) 1034, 1068, 1990, 2024
BciT130I CCWGG 1 cut(s) 1431
BclI TGATCA 2 cut(s) 3, 541
BcnI CCSGG 1 cut(s) 1459
BcoDI GTCTC 2 cut(s) 81, 1484
BfaI CTAG 7 cut(s) 212, 426, 1200, 1373, 1661, 1673, 2012
BfoI RGCGCY 1 cut(s) 1613
BfuAI ACCTGC 1 cut(s) 966
BglI GCCNNNNNGGC 1 cut(s) 411
BglII AGATCT 1 cut(s) 1570
BlnI CCTAGG 1 cut(s) 1660
BlpI GCTNAGC 2 cut(s) 179, 1976
Bme1390I CCNGG 2 cut(s) 1431, 1459
BmeT110I CYCGRG 2 cut(s) 409, 1763
BmgBI CACGTC 2 cut(s) 1363, 1531
BmgT120I GGNCC 4 cut(s) 1465, 1466, 1739, 1740
BmiI GGNNCC 7 cut(s) 1013, 1085, 1207, 1440, 1467, 1468, 1741
BmrFI CCNGG 2 cut(s) 1431, 1459
BmsI GCATC 5 cut(s) 448, 701, 900, 963, 2102
BmtI GCTAGC 1 cut(s) 1676
BpiI GAAGAC 3 cut(s) 582, 1068, 2055
Bpu1102I GCTNAGC 2 cut(s) 179, 1976
BpuEI CTTGAG 2 cut(s) 185, 1559
BpuMI CCSGG 1 cut(s) 1459
BsaJI CCNNGG 5 cut(s) 1044, 1416, 1429, 1458, 1660
BsaWI WCCGGW 2 cut(s) 1593, 1819
BsaXI ACNNNNNCTCC 4 cut(s) 118, 121, 148, 151
Bsc4I CCNNNNNNNGG 5 cut(s) 335, 396, 443, 1435, 1648
Bse118I RCCGGY 1 cut(s) 1497
Bse1I ACTGG 1 cut(s) 1023
Bse21I CCTNAGG 1 cut(s) 471
BseBI CCWGG 1 cut(s) 1431
BseDI CCNNGG 5 cut(s) 1044, 1416, 1429, 1458, 1660
BseGI GGATG 3 cut(s) 140, 707, 2046
BseLI CCNNNNNNNGG 5 cut(s) 335, 396, 443, 1435, 1648
BseMII CTCAG 8 cut(s) 126, 159, 170, 398, 499, 812, 1967, 2009
BseNI ACTGG 1 cut(s) 1023
BseRI GAGGAG 1 cut(s) 126
BseSI GKGCMC 2 cut(s) 1469, 1743
BsgI GTGCAG 1 cut(s) 1812
Bsh1236I CGCG 3 cut(s) 1808, 1982, 1988
BshFI GGCC 6 cut(s) 1178, 1399, 1415, 1467, 1497, 1741
BshNI GGYRCC 1 cut(s) 1083
BsiHKCI CYCGRG 2 cut(s) 409, 1763
BsiSI CCGG 5 cut(s) 1458, 1498, 1594, 1820, 1865
BslFI GGGAC 3 cut(s) 290, 495, 1517
BslI CCNNNNNNNGG 5 cut(s) 335, 396, 443, 1435, 1648
BsmAI GTCTC 2 cut(s) 81, 1484
BsmBI CGTCTC 1 cut(s) 81
BsmFI GGGAC 3 cut(s) 290, 495, 1517
BsnI GGCC 6 cut(s) 1178, 1399, 1415, 1467, 1497, 1741
BsoBI CYCGRG 2 cut(s) 409, 1763
Bsp120I GGGCCC 2 cut(s) 1465, 1739
Bsp1286I GDGCHC 4 cut(s) 1014, 1441, 1469, 1743
Bsp1407I TGTACA 1 cut(s) 1357
Bsp143I GATC 7 cut(s) 3, 154, 541, 679, 758, 1570, 1680
Bsp1720I GCTNAGC 2 cut(s) 179, 1976
BspANI GGCC 6 cut(s) 1178, 1399, 1415, 1467, 1497, 1741
BspCNI CTCAG 8 cut(s) 125, 158, 171, 397, 498, 811, 1968, 2008
BspFNI CGCG 3 cut(s) 1808, 1982, 1988
BspLI GGNNCC 7 cut(s) 1013, 1085, 1207, 1440, 1467, 1468, 1741
BspMI ACCTGC 1 cut(s) 966
BspOI GCTAGC 1 cut(s) 1676
BspPI GGATC 2 cut(s) 162, 1675
BspT107I GGYRCC 1 cut(s) 1083
BsrBI CCGCTC 2 cut(s) 493, 1903
BsrFI RCCGGY 1 cut(s) 1497
BsrGI TGTACA 1 cut(s) 1357
BsrI ACTGG 1 cut(s) 1023
BssAI RCCGGY 1 cut(s) 1497
BssECI CCNNGG 5 cut(s) 1044, 1416, 1429, 1458, 1660
BssMI GATC 7 cut(s) 3, 154, 541, 679, 758, 1570, 1680
BssSI CACGAG 1 cut(s) 1916
BssT1I CCWWGG 2 cut(s) 1416, 1660
Bst2BI CACGAG 1 cut(s) 1916
Bst2UI CCWGG 1 cut(s) 1431
Bst4CI ACNGT 3 cut(s) 338, 703, 1627
Bst6I CTCTTC 2 cut(s) 748, 1530
BstAUI TGTACA 1 cut(s) 1357
BstEII GGTNACC 1 cut(s) 781
BstF5I GGATG 3 cut(s) 140, 707, 2046
BstFNI CGCG 3 cut(s) 1808, 1982, 1988
BstH2I RGCGCY 1 cut(s) 1613
BstHHI GCGC 6 cut(s) 853, 1043, 1169, 1612, 1864, 1982
BstKTI GATC 7 cut(s) 6, 157, 544, 682, 761, 1573, 1683
BstMAI GTCTC 2 cut(s) 81, 1484
BstMBI GATC 7 cut(s) 3, 154, 541, 679, 758, 1570, 1680
BstNI CCWGG 1 cut(s) 1431
BstNSI RCATGY 8 cut(s) 319, 532, 553, 730, 886, 1041, 1072, 1588
BstPI GGTNACC 1 cut(s) 781
BstSCI CCNGG 2 cut(s) 1429, 1457
BstSLI GKGCMC 2 cut(s) 1469, 1743
BstUI CGCG 3 cut(s) 1808, 1982, 1988
BstV2I GAAGAC 3 cut(s) 582, 1068, 2055
BstX2I RGATCY 1 cut(s) 1570
BstXI CCANNNNNNTGG 2 cut(s) 338, 1553
BstYI RGATCY 1 cut(s) 1570
Bsu36I CCTNAGG 1 cut(s) 471
BsuRI GGCC 6 cut(s) 1178, 1399, 1415, 1467, 1497, 1741
BtrI CACGTC 2 cut(s) 1363, 1531
BtsCI GGATG 3 cut(s) 140, 707, 2046
BtsIMutI CAGTG 1 cut(s) 1400
BveI ACCTGC 1 cut(s) 966
CaiI CAGNNNCTG 2 cut(s) 907, 958
CfoI GCGC 6 cut(s) 853, 1043, 1169, 1612, 1864, 1982
Cfr10I RCCGGY 1 cut(s) 1497
Cfr13I GGNCC 4 cut(s) 1465, 1466, 1739, 1740
CseI GACGC 3 cut(s) 205, 762, 1814
Csp6I GTAC 3 cut(s) 1084, 1358, 1852
CviQI GTAC 3 cut(s) 1084, 1358, 1852
DpnI GATC 7 cut(s) 5, 156, 543, 681, 760, 1572, 1682
DpnII GATC 7 cut(s) 3, 154, 541, 679, 758, 1570, 1680
EaeI YGGCCR 2 cut(s) 1176, 1397
Eam1104I CTCTTC 2 cut(s) 748, 1530
EarI CTCTTC 2 cut(s) 748, 1530
EciI GGCGGA 2 cut(s) 700, 1198
Eco130I CCWWGG 2 cut(s) 1416, 1660
Eco147I AGGCCT 1 cut(s) 1415
Eco24I GRGCYC 4 cut(s) 1014, 1441, 1469, 1743
Eco32I GATATC 1 cut(s) 1391
Eco47III AGCGCT 1 cut(s) 1611
Eco81I CCTNAGG 1 cut(s) 471
Eco88I CYCGRG 2 cut(s) 409, 1763
Eco91I GGTNACC 1 cut(s) 781
EcoO109I RGGNCCY 2 cut(s) 1466, 1740
EcoO65I GGTNACC 1 cut(s) 781
EcoRII CCWGG 1 cut(s) 1429
EcoRV GATATC 1 cut(s) 1391
EcoT14I CCWWGG 2 cut(s) 1416, 1660
EcoT38I GRGCYC 4 cut(s) 1014, 1441, 1469, 1743
ErhI CCWWGG 2 cut(s) 1416, 1660
Esp3I CGTCTC 1 cut(s) 81
FaqI GGGAC 3 cut(s) 290, 495, 1517
FauI CCCGC 5 cut(s) 498, 544, 1001, 1427, 1433
FbaI TGATCA 2 cut(s) 3, 541
FblI GTMKAC 1 cut(s) 1275
FokI GGATG 3 cut(s) 127, 694, 2053
FriOI GRGCYC 4 cut(s) 1014, 1441, 1469, 1743
FspBI CTAG 7 cut(s) 212, 426, 1200, 1373, 1661, 1673, 2012
GlaI GCGC 6 cut(s) 852, 1042, 1168, 1611, 1863, 1981
HaeII RGCGCY 1 cut(s) 1613
HaeIII GGCC 6 cut(s) 1178, 1399, 1415, 1467, 1497, 1741
HapII CCGG 5 cut(s) 1458, 1498, 1594, 1820, 1865
HgaI GACGC 3 cut(s) 205, 762, 1814
HhaI GCGC 6 cut(s) 853, 1043, 1169, 1612, 1864, 1982
Hin6I GCGC 6 cut(s) 851, 1041, 1167, 1610, 1862, 1980
HinP1I GCGC 6 cut(s) 851, 1041, 1167, 1610, 1862, 1980
HincII GTYRAC 2 cut(s) 520, 1630
HindII GTYRAC 2 cut(s) 520, 1630
HpaI GTTAAC 1 cut(s) 1630
HpaII CCGG 5 cut(s) 1458, 1498, 1594, 1820, 1865
HphI GGTGA 6 cut(s) 1016, 1082, 1120, 1303, 1954, 2002
Hpy166II GTNNAC 7 cut(s) 520, 1024, 1276, 1358, 1360, 1621, 1630
Hpy188III TCNNGA 6 cut(s) 37, 236, 648, 677, 1763, 1963
Hpy8I GTNNAC 7 cut(s) 520, 1024, 1276, 1358, 1360, 1621, 1630
Hpy99I CGWCG 6 cut(s) 85, 97, 199, 661, 778, 2033
HpyAV CCTTC 7 cut(s) 1040, 1074, 1097, 1231, 1834, 1886, 1933
HpyCH4III ACNGT 3 cut(s) 338, 703, 1627
HpyCH4IV ACGT 5 cut(s) 598, 716, 1354, 1362, 1530
HpySE526I ACGT 5 cut(s) 598, 716, 1354, 1362, 1530
HspAI GCGC 6 cut(s) 851, 1041, 1167, 1610, 1862, 1980
KpnI GGTACC 1 cut(s) 1087
Ksp22I TGATCA 2 cut(s) 3, 541
KspAI GTTAAC 1 cut(s) 1630
Kzo9I GATC 7 cut(s) 3, 154, 541, 679, 758, 1570, 1680
LmnI GCTCC 8 cut(s) 21, 446, 498, 1017, 1444, 1558, 1846, 1900
LweI GCATC 5 cut(s) 448, 701, 900, 963, 2102
MaeI CTAG 7 cut(s) 212, 426, 1200, 1373, 1661, 1673, 2012
MaeII ACGT 5 cut(s) 598, 716, 1354, 1362, 1530
MaeIII GTNAC 7 cut(s) 555, 599, 781, 1108, 1685, 1705, 1990
MalI GATC 7 cut(s) 5, 156, 543, 681, 760, 1572, 1682
MbiI CCGCTC 2 cut(s) 493, 1903
MboI GATC 7 cut(s) 3, 154, 541, 679, 758, 1570, 1680
MfeI CAATTG 2 cut(s) 866, 1654
MflI RGATCY 1 cut(s) 1570
MhlI GDGCHC 4 cut(s) 1014, 1441, 1469, 1743
MlsI TGGCCA 1 cut(s) 1399
MluNI TGGCCA 1 cut(s) 1399
MlyI GAGTC 7 cut(s) 38, 477, 1352, 1629, 1790, 1817, 1987
MmeI TCCRAC 7 cut(s) 84, 104, 218, 699, 1039, 1782, 1905
Mox20I TGGCCA 1 cut(s) 1399
MroXI GAANNNNTTC 1 cut(s) 1220
MscI TGGCCA 1 cut(s) 1399
MseI TTAA 3 cut(s) 170, 186, 1629
MslI CAYNNNNRTG 2 cut(s) 95, 2110
Msp20I TGGCCA 1 cut(s) 1399
MspA1I CMGCKG 6 cut(s) 178, 539, 788, 802, 907, 1975
MspI CCGG 5 cut(s) 1458, 1498, 1594, 1820, 1865
MspR9I CCNGG 2 cut(s) 1431, 1459
MunI CAATTG 2 cut(s) 866, 1654
MvaI CCWGG 1 cut(s) 1431
MvnI CGCG 3 cut(s) 1808, 1982, 1988
NciI CCSGG 1 cut(s) 1459
NdeII GATC 7 cut(s) 3, 154, 541, 679, 758, 1570, 1680
NheI GCTAGC 1 cut(s) 1672
NlaIV GGNNCC 7 cut(s) 1013, 1085, 1207, 1440, 1467, 1468, 1741
NmeAIII GCCGAG 3 cut(s) 1069, 1098, 1763
NmuCI GTSAC 6 cut(s) 555, 599, 1108, 1685, 1705, 1990
NspI RCATGY 8 cut(s) 319, 532, 553, 730, 886, 1041, 1072, 1588
PaeI GCATGC 3 cut(s) 730, 886, 1041
PaeR7I CTCGAG 1 cut(s) 1763
PceI AGGCCT 1 cut(s) 1415
PciI ACATGT 2 cut(s) 1068, 1584
PcsI WCGNNNNNNNCGW 4 cut(s) 89, 213, 1338, 1805
PdmI GAANNNNTTC 1 cut(s) 1220
PfeI GAWTC 4 cut(s) 86, 254, 606, 1124
PflFI GACNNNGTC 2 cut(s) 97, 1996
PleI GAGTC 7 cut(s) 37, 477, 1351, 1629, 1790, 1817, 1987
PpsI GAGTC 7 cut(s) 37, 477, 1351, 1629, 1790, 1817, 1987
PscI ACATGT 2 cut(s) 1068, 1584
Psp6I CCWGG 1 cut(s) 1429
PspEI GGTNACC 1 cut(s) 781
PspGI CCWGG 1 cut(s) 1429
PspN4I GGNNCC 7 cut(s) 1013, 1085, 1207, 1440, 1467, 1468, 1741
PspOMI GGGCCC 2 cut(s) 1465, 1739
PspPI GGNCC 4 cut(s) 1465, 1466, 1739, 1740
PsrI GAACNNNNNNTAC 2 cut(s) 947, 979
PstNI CAGNNNCTG 2 cut(s) 907, 958
PsuI RGATCY 1 cut(s) 1570
PsyI GACNNNGTC 2 cut(s) 97, 1996
PvuII CAGCTG 1 cut(s) 802
RsaI GTAC 3 cut(s) 1085, 1359, 1853
RsaNI GTAC 3 cut(s) 1084, 1358, 1852
RseI CAYNNNNRTG 2 cut(s) 95, 2110
SaqAI TTAA 3 cut(s) 170, 186, 1629
Sau3AI GATC 7 cut(s) 3, 154, 541, 679, 758, 1570, 1680
Sau96I GGNCC 4 cut(s) 1465, 1466, 1739, 1740
SchI GAGTC 7 cut(s) 38, 477, 1352, 1629, 1790, 1817, 1987
ScrFI CCNGG 2 cut(s) 1431, 1459
SduI GDGCHC 4 cut(s) 1014, 1441, 1469, 1743
SfaNI GCATC 5 cut(s) 448, 701, 900, 963, 2102
Sfr274I CTCGAG 1 cut(s) 1763
SlaI CTCGAG 1 cut(s) 1763
SmiMI CAYNNNNRTG 2 cut(s) 95, 2110
SmlI CTYRAG 3 cut(s) 200, 1574, 1763
SmoI CTYRAG 3 cut(s) 200, 1574, 1763
SphI GCATGC 3 cut(s) 730, 886, 1041
SseBI AGGCCT 1 cut(s) 1415
SspMI CTAG 7 cut(s) 212, 426, 1200, 1373, 1661, 1673, 2012
StuI AGGCCT 1 cut(s) 1415
StyD4I CCNGG 2 cut(s) 1429, 1457
StyI CCWWGG 2 cut(s) 1416, 1660
TaaI ACNGT 3 cut(s) 338, 703, 1627
TaiI ACGT 5 cut(s) 601, 719, 1357, 1365, 1533
TaqII GACCGA 2 cut(s) 1523, 1639
TatI WGTACW 2 cut(s) 1357, 1851
TauI GCSGC 6 cut(s) 439, 907, 919, 979, 1181, 1975
TfiI GAWTC 4 cut(s) 86, 254, 606, 1124
Tru1I TTAA 3 cut(s) 170, 186, 1629
Tru9I TTAA 3 cut(s) 170, 186, 1629
TscAI CASTG 1 cut(s) 1400
TseFI GTSAC 6 cut(s) 555, 599, 1108, 1685, 1705, 1990
Tsp45I GTSAC 6 cut(s) 555, 599, 1108, 1685, 1705, 1990
TspDTI ATGAA 3 cut(s) 277, 598, 1396
TspGWI ACGGA 6 cut(s) 98, 485, 618, 1673, 1922, 2060
TspRI CASTG 1 cut(s) 1400
Tth111I GACNNNGTC 2 cut(s) 97, 1996
XapI RAATTY 1 cut(s) 1298
XceI RCATGY 8 cut(s) 319, 532, 553, 730, 886, 1041, 1072, 1588
XhoI CTCGAG 1 cut(s) 1763
XmaJI CCTAGG 1 cut(s) 1660
XmiI GTMKAC 1 cut(s) 1275
XmnI GAANNNNTTC 1 cut(s) 1220
XspI CTAG 7 cut(s) 212, 426, 1200, 1373, 1661, 1673, 2012
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.