Rh2BG680700

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0016909
Physical Location & Seq
Reverse (-)
89035823 .. 89041795
5973 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG680700.1

Sequence Viewer

Length: 2124 bp
ATGATGATGAACTCTCATTGTGGGAGCATGGGTTCGATCAAGAGTGAGAACTCATGCAGCGATTTCAAACCAACTTCTCCCAACGAATCAACAATAATGTCCGAACCACCAAAGAAAGCTACGAGTACTACCACTACTGCTCTGTCTTCCTCCGACATGATGGATCACAGTACTACTAGCTTAACCCCACCGAGCCTCAACTTCCCAGCTCTCAAATTCGAGCTAGAAGGCGACGTCGAAGTTGAATCACCAGACCATTCCATATGGGAGTCGTTGTTTTCGGAACAATTTGATACTGATTTCATGGTGTTGTCCCCGGTGGCAAACACGAACAATAATCTACCCAACTCTCCTCGTACTTTCGGTTACAATGGTCAGGCGATTCAGGGACAGACTAGCTTTTCGGGCTGCTCTCCTCCTCGCTTTGGTTCACCTCCGCTCGGAGCTTTCAGCAGGGACAACAGCAAAGGAAAGGGACTAAGTCCACTCCGGAGGGTTTTCAACTCTCCCGTGAATTACATACAGCAAGAGCCGGAGAACCTGCAGTCACTACCACCAGCGTCAATCGAAGACTTCTTGGATGACTATCAAAGAGACGGCTTTGTAGCAGCGTATAGTGACCCTAACCTTAACCCAACAACCACATGCACATCAAAGATGTCAGGAGGAGGAAGCAATTTGTCCTCGCAATCTTATCACAACCCAATGGTTTCAATGGATTGCAACATGTCAACAACCATGCAAAACCCTTCCAGGTTTTCGCGATCGGTGAGCGAAACATCGTTAGTTACGGCGTGTAACTCTCAGATGACCCAAGAGTCGAGGGGGGGTGGAGCATATCAGCAGATGGGATCCAACTGTAGTGCACCGTTATCACAACAATTGATGCACGAACGCCAGCAAGAGAAGCAACACATGCAGATGCACCCACAAAAGCAACACCACAACAACCACAATTACAATATGATGGCGCCTTCTCTTCCTCCTGTTGCACCTGAGCCGGAACAAGACAGTGGTCTCCAACTGGTTCATCTCCTTCTTGCTTGTGCAGAAGCTGTTGCGAAAGAAGATTACATGTTAGCAAGAAGGTATCTCCACCACCTCAATCAAGTGGTGTCGGCTCTTGGCGACTCCATGCAACGTGTTGCCGCCTGCTTCACAGAAGCCTTAAGCGCACGCCTTGCCGCAACTCTAACCACCAATCCAGGTGCTTTGGCGCCCAAGCCCTTCTCTCCTTTCCCTCCCAACTCCCTAGAAATCCTCAAGATATACCAAATTGTCTACCAAGCCTGCCCCTACGTCAAATTCGCTCACTTCACCGCTAACCAAGCCATTTTCGAGGCGTTTGAGTCCGAAGAACGTGTGCATGTTATTGACCTCGATATTCTTCAAGGTTATCAATGGCCAGCTTTCATGCAAGCCCTAGCAGCCCGATCGGGCGGTGCCCCATTTCTCCGAATAACTGGAGTCGGTCCATGCTTAGAGGCGGTGAAAGAGACGGGCCGGTGTTTGACTGAATTAGCCATCTCTCTTCACGTCCCCTTTGAGTTTCATGCAGTTGGAGAACAACTAGAAGACCTCAAACCACACATGTTCAACCGAAGAATAGGCGAAGCCCTAGCAGTGAACACCGTGAACCGTCTCCACCGCGTTCCGGGGAACTGTCTCGGCAACTTATTAGCCATGATCCGTGACCAAGCACCCAACATTGTGACCCTAGTGGAACAAGAGGCCAGCCACAATGGACCCTACTTTTTGGGCAGGTTCCTCGAAGCCCTACACTATTACTCGGCGATTTTCGACTCGTTGGACGCCACGTTCCCACCGGACTCGGCGCAAAGGGCTAAGGTGGAGCAGTACATATTTGCGCCGGAGATACGGAACATTGTAGCATGTGAAGGAGCGGAGAGGACGGAGAGGCACGAGAGGCTTGAGAAGTGGAGGAAAATAATGGAAGGGAAGGGTTTCAAAAGCGTGCCACTGAGTGCGAACGCGGTGACTCAGTCGAAGATATTGCTGGGTTTGTACTCGTGCGACGGCTATAGAATGACGGAGGACAAAGGTTGCTTGCTGTTGGGGTGGCAAGACCGGTCTATTATGGCGGCGTCTGCATGGAGATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

707

Amino Acids

78.1

Weight (kDa)

5.78

Isoelectric Point (pI)

58.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 342 - 706 4.1e-132 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016909)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g53920
malus_domestica MD09G1007200.v1.1 MD17G1011100.v1.1
prunus_persica Prupe.3G309800_v2.0.a1
pyrus_communis pycom111g00540
rosa_chinensis RchiOBHm_Chr2g0176081
rosa_laevigata RLG00000022379
rosa_multiflora Rmu_sc0009879.1_g000008
rosa_rugosa Rorug02G0590300
rosa_samantha Rh2AG669100 Rh2BG680700 Rh2CG643600 Rh2DG694400
rosa_wichuraiana Rw2G054880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 817
AatII GACGTC 1 cut(s) 237
Acc36I ACCTGC 2 cut(s) 549, 1752
AccB1I GGYRCC 3 cut(s) 970, 1216, 1442
AccBSI CCGCTC 2 cut(s) 439, 1904
AccI GTMKAC 1 cut(s) 1281
AccII CGCG 3 cut(s) 763, 1650, 1994
AccIII TCCGGA 1 cut(s) 489
AclWI GGATC 4 cut(s) 171, 846, 859, 1681
AcoI YGGCCR 1 cut(s) 1403
AcsI RAATTY 2 cut(s) 215, 1304
AcyI GRCGYC 5 cut(s) 234, 971, 1217, 1812, 2105
AdeI CACNNNGTG 1 cut(s) 1985
AfaI GTAC 5 cut(s) 127, 172, 358, 1859, 2027
AfiI CCNNNNNNNGG 3 cut(s) 425, 440, 1654
AflII CTTAAG 1 cut(s) 1168
AflIII ACRYGT 5 cut(s) 726, 1074, 1141, 1360, 1590
AgeI ACCGGT 1 cut(s) 2088
AgsI TTSAA 7 cut(s) 67, 245, 502, 714, 1391, 1597, 1969
AjiI CACGTC 1 cut(s) 1537
AjnI CCWGG 2 cut(s) 752, 1204
AloI GAACNNNNNNTCC 4 cut(s) 16, 48, 1802, 1834
AluBI AGCT 8 cut(s) 119, 180, 209, 223, 399, 446, 1055, 1409
AluI AGCT 8 cut(s) 119, 180, 209, 223, 399, 446, 1055, 1409
Alw21I GWGCWC 1 cut(s) 868
Alw26I GTCTC 5 cut(s) 588, 1022, 1490, 1646, 1670
Alw44I GTGCAC 1 cut(s) 864
AlwI GGATC 4 cut(s) 171, 846, 859, 1681
AlwNI CAGNNNCTG 1 cut(s) 1055
Aor13HI TCCGGA 1 cut(s) 489
AoxI GGCC 3 cut(s) 1403, 1501, 1731
ApaLI GTGCAC 1 cut(s) 864
ApeKI GCWGC 4 cut(s) 57, 408, 608, 1427
ApoI RAATTY 2 cut(s) 215, 1304
ArsI GACNNNNNNTTYG 2 cut(s) 385, 417
AsiGI ACCGGT 1 cut(s) 2088
Asp700I GAANNNNTTC 1 cut(s) 1964
AspLEI GCGC 5 cut(s) 973, 1175, 1219, 1837, 1870
AspS9I GGNCC 3 cut(s) 1472, 1501, 1745
AsuC2I CCSGG 2 cut(s) 317, 1656
AsuHPI GGTGA 6 cut(s) 240, 423, 781, 1309, 1501, 2008
AvaII GGWCC 2 cut(s) 1472, 1745
BaeGI GKGCMC 2 cut(s) 868, 1447
BalI TGGCCA 1 cut(s) 1405
BamHI GGATCC 1 cut(s) 851
BanI GGYRCC 3 cut(s) 970, 1216, 1442
BauI CACGAG 2 cut(s) 1922, 2029
BbsI GAAGAC 3 cut(s) 138, 576, 1581
Bbv12I GWGCWC 1 cut(s) 868
BbvI GCAGC 4 cut(s) 69, 395, 620, 1439
BccI CCATC 4 cut(s) 154, 841, 961, 1532
BceAI ACGGC 3 cut(s) 613, 807, 2053
BcgI CGANNNNNNTGC 6 cut(s) 1416, 1450, 1750, 1784, 1996, 2030
BciT130I CCWGG 2 cut(s) 754, 1206
BcnI CCSGG 2 cut(s) 317, 1656
BcoDI GTCTC 5 cut(s) 588, 1022, 1490, 1646, 1670
BfaI CTAG 9 cut(s) 177, 224, 396, 1253, 1424, 1571, 1619, 1718, 2122
BfmI CTRYAG 3 cut(s) 542, 859, 2041
BfoI RGCGCY 2 cut(s) 974, 1220
BfrI CTTAAG 1 cut(s) 1168
BfuAI ACCTGC 2 cut(s) 549, 1752
BisI GCNGC 7 cut(s) 58, 409, 609, 1149, 1185, 1428, 2103
BlsI GCNGC 7 cut(s) 59, 410, 610, 1150, 1186, 1429, 2104
BmcAI AGTACT 2 cut(s) 127, 172
Bme1390I CCNGG 4 cut(s) 317, 754, 1206, 1656
Bme18I GGWCC 2 cut(s) 1472, 1745
BmgBI CACGTC 1 cut(s) 1537
BmgT120I GGNCC 3 cut(s) 1472, 1501, 1745
BmiI GGNNCC 6 cut(s) 853, 972, 1218, 1444, 1747, 1766
BmrFI CCNGG 4 cut(s) 317, 754, 1206, 1656
BmsI GCATC 3 cut(s) 876, 912, 2108
BoxI GACNNNNGTC 1 cut(s) 1014
BpiI GAAGAC 3 cut(s) 138, 576, 1581
BpmI CTGGAG 1 cut(s) 1485
Bpu10I CCTNAGC 2 cut(s) 996, 1845
BpuEI CTTGAG 2 cut(s) 1247, 1952
BpuMI CCSGG 2 cut(s) 317, 1656
BsaBI GATNNNNATC 1 cut(s) 585
BsaHI GRCGYC 5 cut(s) 234, 971, 1217, 1812, 2105
BsaI GGTCTC 1 cut(s) 1022
BsaJI CCNNGG 2 cut(s) 315, 1655
BsaWI WCCGGW 3 cut(s) 489, 1825, 2088
BsaXI ACNNNNNCTCC 4 cut(s) 16, 46, 260, 290
Bsc4I CCNNNNNNNGG 3 cut(s) 425, 440, 1654
Bse118I RCCGGY 2 cut(s) 1503, 2088
Bse1I ACTGG 2 cut(s) 1029, 1468
Bse8I GATNNNNATC 1 cut(s) 585
BseAI TCCGGA 1 cut(s) 489
BseBI CCWGG 2 cut(s) 754, 1206
BseDI CCNNGG 2 cut(s) 315, 1655
BseGI GGATG 1 cut(s) 586
BseJI GATNNNNATC 1 cut(s) 585
BseLI CCNNNNNNNGG 3 cut(s) 425, 440, 1654
BseMII CTCAG 4 cut(s) 818, 987, 1973, 2015
BseNI ACTGG 2 cut(s) 1029, 1468
BseRI GAGGAG 4 cut(s) 342, 405, 408, 681
BseSI GKGCMC 2 cut(s) 868, 1447
BseXI GCAGC 4 cut(s) 69, 395, 620, 1439
BseYI CCCAGC 2 cut(s) 205, 2017
BsgI GTGCAG 1 cut(s) 1068
Bsh1236I CGCG 3 cut(s) 763, 1650, 1994
Bsh1285I CGRYCG 2 cut(s) 767, 1436
BshFI GGCC 3 cut(s) 1405, 1503, 1733
BshNI GGYRCC 3 cut(s) 970, 1216, 1442
BshTI ACCGGT 1 cut(s) 2088
BsiEI CGRYCG 2 cut(s) 767, 1436
BsiHKAI GWGCWC 1 cut(s) 868
BsiSI CCGG 9 cut(s) 317, 490, 533, 1001, 1504, 1655, 1826, 1871, 2089
BslFI GGGAC 5 cut(s) 298, 402, 470, 489, 1523
BslI CCNNNNNNNGG 3 cut(s) 425, 440, 1654
BsmAI GTCTC 5 cut(s) 588, 1022, 1490, 1646, 1670
BsmBI CGTCTC 3 cut(s) 588, 1490, 1646
BsmFI GGGAC 5 cut(s) 298, 402, 470, 489, 1523
BsnI GGCC 3 cut(s) 1405, 1503, 1733
Bso31I GGTCTC 1 cut(s) 1022
Bsp1286I GDGCHC 2 cut(s) 868, 1447
Bsp13I TCCGGA 1 cut(s) 489
Bsp143I GATC 6 cut(s) 36, 163, 764, 851, 1433, 1686
Bsp68I TCGCGA 1 cut(s) 763
BspANI GGCC 3 cut(s) 1405, 1503, 1733
BspCNI CTCAG 4 cut(s) 817, 988, 1974, 2014
BspEI TCCGGA 1 cut(s) 489
BspFNI CGCG 3 cut(s) 763, 1650, 1994
BspLI GGNNCC 6 cut(s) 853, 972, 1218, 1444, 1747, 1766
BspMAI CTGCAG 1 cut(s) 546
BspMI ACCTGC 2 cut(s) 549, 1752
BspPI GGATC 4 cut(s) 171, 846, 859, 1681
BspT107I GGYRCC 3 cut(s) 970, 1216, 1442
BspTI CTTAAG 1 cut(s) 1168
BspTNI GGTCTC 1 cut(s) 1022
BsrBI CCGCTC 2 cut(s) 439, 1904
BsrFI RCCGGY 2 cut(s) 1503, 2088
BsrI ACTGG 2 cut(s) 1029, 1468
BssAI RCCGGY 2 cut(s) 1503, 2088
BssECI CCNNGG 2 cut(s) 315, 1655
BssMI GATC 6 cut(s) 36, 163, 764, 851, 1433, 1686
BssNI GRCGYC 5 cut(s) 234, 971, 1217, 1812, 2105
BssSI CACGAG 2 cut(s) 1922, 2029
Bst2BI CACGAG 2 cut(s) 1922, 2029
Bst2UI CCWGG 2 cut(s) 754, 1206
Bst4CI ACNGT 7 cut(s) 170, 860, 870, 1013, 1633, 1640, 1664
Bst6I CTCTTC 2 cut(s) 984, 1536
BstACI GRCGYC 5 cut(s) 234, 971, 1217, 1812, 2105
BstAFI CTTAAG 1 cut(s) 1168
BstAPI GCANNNNNTGC 2 cut(s) 916, 1181
BstC8I GCNNGC 9 cut(s) 899, 1153, 1177, 1291, 1407, 1419, 1735, 1976, 2069
BstDEI CTNAG 7 cut(s) 479, 804, 996, 1480, 1845, 1982, 2001
BstF5I GGATG 1 cut(s) 586
BstFNI CGCG 3 cut(s) 763, 1650, 1994
BstH2I RGCGCY 2 cut(s) 974, 1220
BstHHI GCGC 5 cut(s) 973, 1175, 1219, 1837, 1870
BstKTI GATC 6 cut(s) 39, 166, 767, 854, 1436, 1689
BstMAI GTCTC 5 cut(s) 588, 1022, 1490, 1646, 1670
BstMBI GATC 6 cut(s) 36, 163, 764, 851, 1433, 1686
BstMCI CGRYCG 2 cut(s) 767, 1436
BstNI CCWGG 2 cut(s) 754, 1206
BstNSI RCATGY 7 cut(s) 648, 730, 919, 1078, 1370, 1594, 1896
BstPAI GACNNNNGTC 1 cut(s) 1014
BstSCI CCNGG 4 cut(s) 315, 752, 1204, 1654
BstSFI CTRYAG 3 cut(s) 542, 859, 2041
BstSLI GKGCMC 2 cut(s) 868, 1447
BstUI CGCG 3 cut(s) 763, 1650, 1994
BstV1I GCAGC 4 cut(s) 69, 395, 620, 1439
BstV2I GAAGAC 3 cut(s) 138, 576, 1581
BstX2I RGATCY 1 cut(s) 851
BstYI RGATCY 1 cut(s) 851
BsuRI GGCC 3 cut(s) 1405, 1503, 1733
BtrI CACGTC 1 cut(s) 1537
BtsCI GGATG 1 cut(s) 586
BtsI GCAGTG 1 cut(s) 1629
BtsIMutI CAGTG 3 cut(s) 1018, 1629, 1979
BtuMI TCGCGA 1 cut(s) 763
BveI ACCTGC 2 cut(s) 549, 1752
Cac8I GCNNGC 9 cut(s) 899, 1153, 1177, 1291, 1407, 1419, 1735, 1976, 2069
CaiI CAGNNNCTG 1 cut(s) 1055
CfoI GCGC 5 cut(s) 973, 1175, 1219, 1837, 1870
Cfr10I RCCGGY 2 cut(s) 1503, 2088
Cfr13I GGNCC 3 cut(s) 1472, 1501, 1745
CseI GACGC 3 cut(s) 549, 1820, 2094
Csp6I GTAC 5 cut(s) 126, 171, 357, 1858, 2026
CspAI ACCGGT 1 cut(s) 2088
CviQI GTAC 5 cut(s) 126, 171, 357, 1858, 2026
DdeI CTNAG 7 cut(s) 479, 804, 996, 1480, 1845, 1982, 2001
DinI GGCGCC 2 cut(s) 972, 1218
DpnI GATC 6 cut(s) 38, 165, 766, 853, 1435, 1688
DpnII GATC 6 cut(s) 36, 163, 764, 851, 1433, 1686
DraIII CACNNNGTG 1 cut(s) 1985
DrdI GACNNNNNNGTC 1 cut(s) 817
DseDI GACNNNNNNGTC 1 cut(s) 817
EaeI YGGCCR 1 cut(s) 1403
Eam1104I CTCTTC 2 cut(s) 984, 1536
EarI CTCTTC 2 cut(s) 984, 1536
Eco31I GGTCTC 1 cut(s) 1022
Eco47I GGWCC 2 cut(s) 1472, 1745
EcoRII CCWGG 2 cut(s) 752, 1204
EgeI GGCGCC 2 cut(s) 972, 1218
EheI GGCGCC 2 cut(s) 972, 1218
Esp3I CGTCTC 3 cut(s) 588, 1490, 1646
FaqI GGGAC 5 cut(s) 298, 402, 470, 489, 1523
FauNDI CATATG 1 cut(s) 263
FblI GTMKAC 1 cut(s) 1281
Fnu4HI GCNGC 7 cut(s) 58, 409, 609, 1149, 1185, 1428, 2103
FokI GGATG 1 cut(s) 593
Fsp4HI GCNGC 7 cut(s) 58, 409, 609, 1149, 1185, 1428, 2103
FspBI CTAG 9 cut(s) 177, 224, 396, 1253, 1424, 1571, 1619, 1718, 2122
GlaI GCGC 5 cut(s) 972, 1174, 1218, 1836, 1869
GluI GCNGC 7 cut(s) 58, 409, 609, 1149, 1185, 1428, 2103
GsaI CCCAGC 2 cut(s) 209, 2021
GsuI CTGGAG 1 cut(s) 1485
HaeII RGCGCY 2 cut(s) 974, 1220
HaeIII GGCC 3 cut(s) 1405, 1503, 1733
HapII CCGG 9 cut(s) 317, 490, 533, 1001, 1504, 1655, 1826, 1871, 2089
HgaI GACGC 3 cut(s) 549, 1820, 2094
HhaI GCGC 5 cut(s) 973, 1175, 1219, 1837, 1870
Hin1I GRCGYC 5 cut(s) 234, 971, 1217, 1812, 2105
Hin6I GCGC 5 cut(s) 971, 1173, 1217, 1835, 1868
HinP1I GCGC 5 cut(s) 971, 1173, 1217, 1835, 1868
HincII GTYRAC 1 cut(s) 732
HindII GTYRAC 1 cut(s) 732
HpaII CCGG 9 cut(s) 317, 490, 533, 1001, 1504, 1655, 1826, 1871, 2089
HphI GGTGA 6 cut(s) 240, 423, 781, 1309, 1501, 2008
Hpy166II GTNNAC 7 cut(s) 431, 485, 732, 866, 1282, 1627, 1636
Hpy188I TCNGA 7 cut(s) 103, 154, 283, 443, 807, 1354, 1457
Hpy188III TCNNGA 5 cut(s) 40, 490, 663, 762, 1264
Hpy8I GTNNAC 7 cut(s) 431, 485, 732, 866, 1282, 1627, 1636
Hpy99I CGWCG 3 cut(s) 236, 239, 2039
HpyAV CCTTC 9 cut(s) 221, 759, 984, 1046, 1080, 1237, 1892, 1949, 1954
HpyCH4III ACNGT 7 cut(s) 170, 860, 870, 1013, 1633, 1640, 1664
HpyCH4IV ACGT 6 cut(s) 234, 1141, 1299, 1360, 1536, 1817
HpyF3I CTNAG 7 cut(s) 479, 804, 996, 1480, 1845, 1982, 2001
HpySE526I ACGT 6 cut(s) 234, 1141, 1299, 1360, 1536, 1817
Hsp92I GRCGYC 5 cut(s) 234, 971, 1217, 1812, 2105
HspAI GCGC 5 cut(s) 971, 1173, 1217, 1835, 1868
KasI GGCGCC 2 cut(s) 970, 1216
Kpn2I TCCGGA 1 cut(s) 489
Kzo9I GATC 6 cut(s) 36, 163, 764, 851, 1433, 1686
LmnI GCTCC 5 cut(s) 24, 443, 833, 1852, 1901
Lsp1109I GCAGC 4 cut(s) 69, 395, 620, 1439
LweI GCATC 3 cut(s) 876, 912, 2108
MaeI CTAG 9 cut(s) 177, 224, 396, 1253, 1424, 1571, 1619, 1718, 2122
MaeII ACGT 6 cut(s) 234, 1141, 1299, 1360, 1536, 1817
MaeIII GTNAC 8 cut(s) 365, 546, 617, 787, 797, 1691, 1711, 1996
MalI GATC 6 cut(s) 38, 165, 766, 853, 1435, 1688
MbiI CCGCTC 2 cut(s) 439, 1904
MboI GATC 6 cut(s) 36, 163, 764, 851, 1433, 1686
MfeI CAATTG 1 cut(s) 881
MflI RGATCY 1 cut(s) 851
MhlI GDGCHC 2 cut(s) 868, 1447
MlsI TGGCCA 1 cut(s) 1405
MluCI AATT 9 cut(s) 215, 287, 514, 676, 881, 955, 1275, 1304, 1517
MluNI TGGCCA 1 cut(s) 1405
Mly113I GGCGCC 2 cut(s) 971, 1217
MlyI GAGTC 8 cut(s) 278, 827, 1124, 1358, 1476, 1796, 1823, 1993
MmeI TCCRAC 5 cut(s) 177, 879, 1045, 1540, 1788
Mox20I TGGCCA 1 cut(s) 1405
MroI TCCGGA 1 cut(s) 489
MroXI GAANNNNTTC 1 cut(s) 1964
MscI TGGCCA 1 cut(s) 1405
MseI TTAA 3 cut(s) 182, 630, 1169
MslI CAYNNNNRTG 2 cut(s) 920, 2116
Msp20I TGGCCA 1 cut(s) 1405
MspCI CTTAAG 1 cut(s) 1168
MspI CCGG 9 cut(s) 317, 490, 533, 1001, 1504, 1655, 1826, 1871, 2089
MspR9I CCNGG 4 cut(s) 317, 754, 1206, 1656
MunI CAATTG 1 cut(s) 881
MvaI CCWGG 2 cut(s) 754, 1206
MvnI CGCG 3 cut(s) 763, 1650, 1994
NarI GGCGCC 2 cut(s) 971, 1217
NciI CCSGG 2 cut(s) 317, 1656
NdeI CATATG 1 cut(s) 263
NdeII GATC 6 cut(s) 36, 163, 764, 851, 1433, 1686
NlaIV GGNNCC 6 cut(s) 853, 972, 1218, 1444, 1747, 1766
NmeAIII GCCGAG 3 cut(s) 1647, 1769, 1811
NmuCI GTSAC 5 cut(s) 546, 617, 1691, 1711, 1996
NruI TCGCGA 1 cut(s) 763
NspI RCATGY 7 cut(s) 648, 730, 919, 1078, 1370, 1594, 1896
PciI ACATGT 3 cut(s) 726, 1074, 1590
PdmI GAANNNNTTC 1 cut(s) 1964
PfeI GAWTC 3 cut(s) 86, 245, 382
PflFI GACNNNGTC 2 cut(s) 480, 2002
PinAI ACCGGT 1 cut(s) 2088
PkrI GCNGC 7 cut(s) 59, 410, 610, 1150, 1186, 1429, 2104
Ple19I CGATCG 2 cut(s) 767, 1436
PleI GAGTC 8 cut(s) 277, 826, 1124, 1357, 1475, 1796, 1823, 1993
PluTI GGCGCC 2 cut(s) 974, 1220
PpsI GAGTC 8 cut(s) 277, 826, 1124, 1357, 1475, 1796, 1823, 1993
PscI ACATGT 3 cut(s) 726, 1074, 1590
PshAI GACNNNNGTC 1 cut(s) 1014
Psp6I CCWGG 2 cut(s) 752, 1204
PspFI CCCAGC 2 cut(s) 205, 2017
PspGI CCWGG 2 cut(s) 752, 1204
PspN4I GGNNCC 6 cut(s) 853, 972, 1218, 1444, 1747, 1766
PspPI GGNCC 3 cut(s) 1472, 1501, 1745
PstI CTGCAG 1 cut(s) 546
PstNI CAGNNNCTG 1 cut(s) 1055
PsuI RGATCY 1 cut(s) 851
PsyI GACNNNGTC 2 cut(s) 480, 2002
PvuI CGATCG 2 cut(s) 767, 1436
RruI TCGCGA 1 cut(s) 763
RsaI GTAC 5 cut(s) 127, 172, 358, 1859, 2027
RsaNI GTAC 5 cut(s) 126, 171, 357, 1858, 2026
RseI CAYNNNNRTG 2 cut(s) 920, 2116
SaqAI TTAA 3 cut(s) 182, 630, 1169
SatI GCNGC 7 cut(s) 58, 409, 609, 1149, 1185, 1428, 2103
Sau3AI GATC 6 cut(s) 36, 163, 764, 851, 1433, 1686
Sau96I GGNCC 3 cut(s) 1472, 1501, 1745
ScaI AGTACT 2 cut(s) 127, 172
SchI GAGTC 8 cut(s) 278, 827, 1124, 1358, 1476, 1796, 1823, 1993
ScrFI CCNGG 4 cut(s) 317, 754, 1206, 1656
SduI GDGCHC 2 cut(s) 868, 1447
SfaNI GCATC 3 cut(s) 876, 912, 2108
SfcI CTRYAG 3 cut(s) 542, 859, 2041
SfoI GGCGCC 2 cut(s) 972, 1218
SinI GGWCC 2 cut(s) 1472, 1745
SmiMI CAYNNNNRTG 2 cut(s) 920, 2116
SmlI CTYRAG 3 cut(s) 1168, 1262, 1931
SmoI CTYRAG 3 cut(s) 1168, 1262, 1931
Sse9I AATT 9 cut(s) 215, 287, 514, 676, 881, 955, 1275, 1304, 1517
SspDI GGCGCC 2 cut(s) 970, 1216
SspMI CTAG 9 cut(s) 177, 224, 396, 1253, 1424, 1571, 1619, 1718, 2122
StyD4I CCNGG 4 cut(s) 315, 752, 1204, 1654
TaaI ACNGT 7 cut(s) 170, 860, 870, 1013, 1633, 1640, 1664
TaiI ACGT 6 cut(s) 237, 1144, 1302, 1363, 1539, 1820
TaqII GACCGA 1 cut(s) 1460
TasI AATT 9 cut(s) 215, 287, 514, 676, 881, 955, 1275, 1304, 1517
TatI WGTACW 4 cut(s) 125, 170, 1857, 2025
TauI GCSGC 3 cut(s) 1151, 1187, 2105
TfiI GAWTC 3 cut(s) 86, 245, 382
Tru1I TTAA 3 cut(s) 182, 630, 1169
Tru9I TTAA 3 cut(s) 182, 630, 1169
TscAI CASTG 3 cut(s) 1018, 1629, 1986
TseFI GTSAC 5 cut(s) 546, 617, 1691, 1711, 1996
TseI GCWGC 4 cut(s) 57, 408, 608, 1427
Tsp45I GTSAC 5 cut(s) 546, 617, 1691, 1711, 1996
TspDTI ATGAA 5 cut(s) 23, 292, 1019, 1402, 1541
TspGWI ACGGA 4 cut(s) 1679, 1894, 1928, 2066
TspRI CASTG 3 cut(s) 1018, 1629, 1986
Tth111I GACNNNGTC 2 cut(s) 480, 2002
Vha464I CTTAAG 1 cut(s) 1168
VneI GTGCAC 1 cut(s) 864
VpaK11BI GGWCC 2 cut(s) 1472, 1745
XapI RAATTY 2 cut(s) 215, 1304
XceI RCATGY 7 cut(s) 648, 730, 919, 1078, 1370, 1594, 1896
XmiI GTMKAC 1 cut(s) 1281
XmnI GAANNNNTTC 1 cut(s) 1964
XspI CTAG 9 cut(s) 177, 224, 396, 1253, 1424, 1571, 1619, 1718, 2122
ZraI GACGTC 1 cut(s) 235
ZrmI AGTACT 2 cut(s) 127, 172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.