WRKY transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G04880 AT2G04880 |
| fragaria_vesca | FvH4_6g41210 |
| malus_domestica | MD09G1121600.v1.1 MD17G1112600.v1.1 |
| prunus_persica | Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 |
| pyrus_communis | pycom09g04600 pycom17g10430 |
| rosa_chinensis | RchiOBHm_Chr2g0156771 |
| rosa_laevigata | RLG00000020940 |
| rosa_multiflora | Rmu_sc0008149.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00092740 |
| rosa_rugosa | Rorug02G0456100 Rorug02G0456100 |
| rosa_samantha | Rh2AG521500 Rh2BG535000 Rh2CG506400 Rh2DG544000 |
| rosa_wichuraiana | Rw2G043060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 166 |
| Acc16I | TGCGCA | 1 cut(s) | 615 |
| Acc36I | ACCTGC | 1 cut(s) | 166 |
| AccB1I | GGYRCC | 1 cut(s) | 178 |
| AccII | CGCG | 1 cut(s) | 1101 |
| AciI | CCGC | 2 cut(s) | 1054, 1099 |
| AclWI | GGATC | 3 cut(s) | 119, 644, 725 |
| AcoI | YGGCCR | 3 cut(s) | 364, 463, 619 |
| AcsI | RAATTY | 1 cut(s) | 385 |
| AcuI | CTGAAG | 1 cut(s) | 702 |
| AcvI | CACGTG | 1 cut(s) | 1157 |
| AcyI | GRCGYC | 1 cut(s) | 938 |
| AfaI | GTAC | 4 cut(s) | 415, 830, 1077, 1243 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 107, 1005 |
| AflIII | ACRYGT | 2 cut(s) | 925, 1038 |
| AgsI | TTSAA | 1 cut(s) | 666 |
| AjnI | CCWGG | 1 cut(s) | 904 |
| AluBI | AGCT | 2 cut(s) | 530, 661 |
| AluI | AGCT | 2 cut(s) | 530, 661 |
| Alw21I | GWGCWC | 1 cut(s) | 702 |
| Alw26I | GTCTC | 1 cut(s) | 945 |
| AlwI | GGATC | 3 cut(s) | 119, 644, 725 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 530, 680 |
| Ama87I | CYCGRG | 1 cut(s) | 9 |
| AoxI | GGCC | 4 cut(s) | 364, 463, 619, 1050 |
| ApeKI | GCWGC | 2 cut(s) | 527, 1028 |
| ApoI | RAATTY | 1 cut(s) | 385 |
| AseI | ATTAAT | 1 cut(s) | 81 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 226 |
| AspLEI | GCGC | 2 cut(s) | 616, 840 |
| AspS9I | GGNCC | 1 cut(s) | 1051 |
| AsuHPI | GGTGA | 3 cut(s) | 503, 605, 1006 |
| AsuII | TTCGAA | 1 cut(s) | 950 |
| AvaI | CYCGRG | 1 cut(s) | 9 |
| BalI | TGGCCA | 3 cut(s) | 366, 465, 621 |
| BanI | GGYRCC | 1 cut(s) | 178 |
| BanII | GRGCYC | 1 cut(s) | 1202 |
| BbrPI | CACGTG | 1 cut(s) | 1157 |
| BbsI | GAAGAC | 1 cut(s) | 571 |
| Bbv12I | GWGCWC | 1 cut(s) | 702 |
| BbvI | GCAGC | 2 cut(s) | 539, 1040 |
| BccI | CCATC | 8 cut(s) | 14, 179, 319, 335, 584, 719, 818, 828 |
| BceAI | ACGGC | 2 cut(s) | 671, 1065 |
| BciT130I | CCWGG | 1 cut(s) | 906 |
| BciVI | GTATCC | 1 cut(s) | 556 |
| BclI | TGATCA | 1 cut(s) | 985 |
| BcoDI | GTCTC | 1 cut(s) | 945 |
| BfaI | CTAG | 1 cut(s) | 1107 |
| BfmI | CTRYAG | 2 cut(s) | 406, 889 |
| BfuAI | ACCTGC | 1 cut(s) | 166 |
| BfuI | GTATCC | 1 cut(s) | 556 |
| BisI | GCNGC | 3 cut(s) | 528, 1029, 1099 |
| BlsI | GCNGC | 3 cut(s) | 529, 1030, 1100 |
| Bme1390I | CCNGG | 1 cut(s) | 906 |
| BmeT110I | CYCGRG | 1 cut(s) | 9 |
| BmgT120I | GGNCC | 1 cut(s) | 1051 |
| BmiI | GGNNCC | 2 cut(s) | 180, 304 |
| BmrFI | CCNGG | 1 cut(s) | 906 |
| BmsI | GCATC | 6 cut(s) | 209, 427, 635, 884, 899, 1040 |
| BpiI | GAAGAC | 1 cut(s) | 571 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 925, 957 |
| BpmI | CTGGAG | 1 cut(s) | 373 |
| Bpu14I | TTCGAA | 1 cut(s) | 950 |
| BpuEI | CTTGAG | 2 cut(s) | 344, 1325 |
| BsaAI | YACGTR | 1 cut(s) | 1157 |
| BsaBI | GATNNNNATC | 3 cut(s) | 345, 729, 1191 |
| BsaHI | GRCGYC | 1 cut(s) | 938 |
| BsaJI | CCNNGG | 3 cut(s) | 783, 878, 1080 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 107, 1005 |
| Bse1I | ACTGG | 2 cut(s) | 356, 644 |
| Bse3DI | GCAATG | 1 cut(s) | 119 |
| Bse8I | GATNNNNATC | 3 cut(s) | 345, 729, 1191 |
| BseBI | CCWGG | 1 cut(s) | 906 |
| BseDI | CCNNGG | 3 cut(s) | 783, 878, 1080 |
| BseGI | GGATG | 2 cut(s) | 418, 914 |
| BseJI | GATNNNNATC | 3 cut(s) | 345, 729, 1191 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 107, 1005 |
| BseMI | GCAATG | 1 cut(s) | 119 |
| BseMII | CTCAG | 4 cut(s) | 153, 234, 719, 1187 |
| BseNI | ACTGG | 2 cut(s) | 356, 644 |
| BseXI | GCAGC | 2 cut(s) | 539, 1040 |
| BseYI | CCCAGC | 1 cut(s) | 523 |
| BsgI | GTGCAG | 2 cut(s) | 258, 710 |
| Bsh1236I | CGCG | 1 cut(s) | 1101 |
| BshFI | GGCC | 4 cut(s) | 366, 465, 621, 1052 |
| BshNI | GGYRCC | 1 cut(s) | 178 |
| BsiHKAI | GWGCWC | 1 cut(s) | 702 |
| BsiHKCI | CYCGRG | 1 cut(s) | 9 |
| BslFI | GGGAC | 2 cut(s) | 37, 506 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 107, 1005 |
| BsmAI | GTCTC | 1 cut(s) | 945 |
| BsmBI | CGTCTC | 1 cut(s) | 945 |
| BsmFI | GGGAC | 2 cut(s) | 37, 506 |
| BsmI | GAATGC | 3 cut(s) | 502, 616, 1093 |
| BsnI | GGCC | 4 cut(s) | 366, 465, 621, 1052 |
| BsoBI | CYCGRG | 1 cut(s) | 9 |
| Bsp119I | TTCGAA | 1 cut(s) | 950 |
| Bsp1286I | GDGCHC | 2 cut(s) | 702, 1202 |
| Bsp143I | GATC | 8 cut(s) | 111, 130, 287, 649, 730, 985, 1192, 1288 |
| BspACI | CCGC | 2 cut(s) | 1054, 1099 |
| BspANI | GGCC | 4 cut(s) | 366, 465, 621, 1052 |
| BspCNI | CTCAG | 4 cut(s) | 154, 235, 718, 1188 |
| BspFNI | CGCG | 1 cut(s) | 1101 |
| BspHI | TCATGA | 2 cut(s) | 943, 988 |
| BspLI | GGNNCC | 2 cut(s) | 180, 304 |
| BspMI | ACCTGC | 1 cut(s) | 166 |
| BspPI | GGATC | 3 cut(s) | 119, 644, 725 |
| BspT104I | TTCGAA | 1 cut(s) | 950 |
| BspT107I | GGYRCC | 1 cut(s) | 178 |
| BsrDI | GCAATG | 1 cut(s) | 119 |
| BsrI | ACTGG | 2 cut(s) | 356, 644 |
| BssECI | CCNNGG | 3 cut(s) | 783, 878, 1080 |
| BssMI | GATC | 8 cut(s) | 111, 130, 287, 649, 730, 985, 1192, 1288 |
| BssNI | GRCGYC | 1 cut(s) | 938 |
| BssT1I | CCWWGG | 2 cut(s) | 878, 1080 |
| Bst2UI | CCWGG | 1 cut(s) | 906 |
| Bst4CI | ACNGT | 1 cut(s) | 1012 |
| BstACI | GRCGYC | 1 cut(s) | 938 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 697 |
| BstBAI | YACGTR | 1 cut(s) | 1157 |
| BstBI | TTCGAA | 1 cut(s) | 950 |
| BstC8I | GCNNGC | 4 cut(s) | 702, 1054, 1136, 1168 |
| BstDEI | CTNAG | 4 cut(s) | 162, 243, 705, 1196 |
| BstDSI | CCRYGG | 1 cut(s) | 783 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 105 |
| BstF5I | GGATG | 2 cut(s) | 418, 914 |
| BstFNI | CGCG | 1 cut(s) | 1101 |
| BstHHI | GCGC | 2 cut(s) | 616, 840 |
| BstKTI | GATC | 8 cut(s) | 114, 133, 290, 652, 733, 988, 1195, 1291 |
| BstMAI | GTCTC | 1 cut(s) | 945 |
| BstMBI | GATC | 8 cut(s) | 111, 130, 287, 649, 730, 985, 1192, 1288 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 697, 1107, 1387 |
| BstNI | CCWGG | 1 cut(s) | 906 |
| BstNSI | RCATGY | 2 cut(s) | 929, 1242 |
| BstSCI | CCNGG | 1 cut(s) | 904 |
| BstSFI | CTRYAG | 2 cut(s) | 406, 889 |
| BstUI | CGCG | 1 cut(s) | 1101 |
| BstV1I | GCAGC | 2 cut(s) | 539, 1040 |
| BstV2I | GAAGAC | 1 cut(s) | 571 |
| BstX2I | RGATCY | 2 cut(s) | 111, 649 |
| BstYI | RGATCY | 2 cut(s) | 111, 649 |
| BsuI | GTATCC | 1 cut(s) | 556 |
| BsuRI | GGCC | 4 cut(s) | 366, 465, 621, 1052 |
| BtgI | CCRYGG | 1 cut(s) | 783 |
| BtgZI | GCGATG | 1 cut(s) | 1344 |
| BtsCI | GGATG | 2 cut(s) | 418, 914 |
| BtsI | GCAGTG | 1 cut(s) | 270 |
| BtsIMutI | CAGTG | 2 cut(s) | 270, 349 |
| BveI | ACCTGC | 1 cut(s) | 166 |
| Cac8I | GCNNGC | 4 cut(s) | 702, 1054, 1136, 1168 |
| CaiI | CAGNNNCTG | 2 cut(s) | 530, 680 |
| CciI | TCATGA | 2 cut(s) | 943, 988 |
| CfoI | GCGC | 2 cut(s) | 616, 840 |
| Cfr13I | GGNCC | 1 cut(s) | 1051 |
| CseI | GACGC | 3 cut(s) | 159, 927, 1346 |
| Csp6I | GTAC | 4 cut(s) | 414, 829, 1076, 1242 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 259, 294 |
| CviQI | GTAC | 4 cut(s) | 414, 829, 1076, 1242 |
| DdeI | CTNAG | 4 cut(s) | 162, 243, 705, 1196 |
| DpnI | GATC | 8 cut(s) | 113, 132, 289, 651, 732, 987, 1194, 1290 |
| DpnII | GATC | 8 cut(s) | 111, 130, 287, 649, 730, 985, 1192, 1288 |
| EaeI | YGGCCR | 3 cut(s) | 364, 463, 619 |
| Eco130I | CCWWGG | 2 cut(s) | 878, 1080 |
| Eco24I | GRGCYC | 1 cut(s) | 1202 |
| Eco57I | CTGAAG | 1 cut(s) | 702 |
| Eco72I | CACGTG | 1 cut(s) | 1157 |
| Eco88I | CYCGRG | 1 cut(s) | 9 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 105 |
| EcoRII | CCWGG | 1 cut(s) | 904 |
| EcoT14I | CCWWGG | 2 cut(s) | 878, 1080 |
| EcoT38I | GRGCYC | 1 cut(s) | 1202 |
| ErhI | CCWWGG | 2 cut(s) | 878, 1080 |
| Esp3I | CGTCTC | 1 cut(s) | 945 |
| FaqI | GGGAC | 2 cut(s) | 37, 506 |
| FauI | CCCGC | 1 cut(s) | 1061 |
| FauNDI | CATATG | 2 cut(s) | 391, 970 |
| FbaI | TGATCA | 1 cut(s) | 985 |
| Fnu4HI | GCNGC | 3 cut(s) | 528, 1029, 1099 |
| FokI | GGATG | 2 cut(s) | 405, 921 |
| FriOI | GRGCYC | 1 cut(s) | 1202 |
| Fsp4HI | GCNGC | 3 cut(s) | 528, 1029, 1099 |
| FspAI | RTGCGCAY | 1 cut(s) | 615 |
| FspBI | CTAG | 1 cut(s) | 1107 |
| FspI | TGCGCA | 1 cut(s) | 615 |
| GlaI | GCGC | 2 cut(s) | 615, 839 |
| GluI | GCNGC | 3 cut(s) | 528, 1029, 1099 |
| GsaI | CCCAGC | 1 cut(s) | 527 |
| GsuI | CTGGAG | 1 cut(s) | 373 |
| HaeIII | GGCC | 4 cut(s) | 366, 465, 621, 1052 |
| HgaI | GACGC | 3 cut(s) | 159, 927, 1346 |
| HhaI | GCGC | 2 cut(s) | 616, 840 |
| Hin1I | GRCGYC | 1 cut(s) | 938 |
| Hin6I | GCGC | 2 cut(s) | 614, 838 |
| HinP1I | GCGC | 2 cut(s) | 614, 838 |
| HinfI | GANTC | 3 cut(s) | 947, 1064, 1187 |
| HphI | GGTGA | 3 cut(s) | 503, 605, 1006 |
| Hpy166II | GTNNAC | 2 cut(s) | 455, 1044 |
| Hpy188I | TCNGA | 9 cut(s) | 43, 70, 130, 244, 795, 1174, 1192, 1197, 1324 |
| Hpy188III | TCNNGA | 9 cut(s) | 9, 215, 296, 436, 734, 944, 989, 1304, 1361 |
| Hpy8I | GTNNAC | 2 cut(s) | 455, 1044 |
| Hpy99I | CGWCG | 3 cut(s) | 175, 610, 1051 |
| HpyAV | CCTTC | 4 cut(s) | 212, 293, 748, 1319 |
| HpyCH4III | ACNGT | 1 cut(s) | 1012 |
| HpyCH4IV | ACGT | 3 cut(s) | 451, 1038, 1156 |
| HpyCH4V | TGCA | 6 cut(s) | 124, 200, 275, 674, 691, 1232 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 697, 1107, 1387 |
| HpyF3I | CTNAG | 4 cut(s) | 162, 243, 705, 1196 |
| HpySE526I | ACGT | 3 cut(s) | 451, 1038, 1156 |
| Hsp92I | GRCGYC | 1 cut(s) | 938 |
| HspAI | GCGC | 2 cut(s) | 614, 838 |
| Ksp22I | TGATCA | 1 cut(s) | 985 |
| Kzo9I | GATC | 8 cut(s) | 111, 130, 287, 649, 730, 985, 1192, 1288 |
| LmnI | GCTCC | 1 cut(s) | 1378 |
| Lsp1109I | GCAGC | 2 cut(s) | 539, 1040 |
| LweI | GCATC | 6 cut(s) | 209, 427, 635, 884, 899, 1040 |
| MaeI | CTAG | 1 cut(s) | 1107 |
| MaeII | ACGT | 3 cut(s) | 451, 1038, 1156 |
| MaeIII | GTNAC | 4 cut(s) | 401, 676, 884, 1012 |
| MalI | GATC | 8 cut(s) | 113, 132, 289, 651, 732, 987, 1194, 1290 |
| MboI | GATC | 8 cut(s) | 111, 130, 287, 649, 730, 985, 1192, 1288 |
| MboII | GAAGA | 4 cut(s) | 29, 576, 608, 763 |
| MflI | RGATCY | 2 cut(s) | 111, 649 |
| MhlI | GDGCHC | 2 cut(s) | 702, 1202 |
| MlsI | TGGCCA | 3 cut(s) | 366, 465, 621 |
| MluCI | AATT | 5 cut(s) | 78, 149, 385, 854, 1314 |
| MluNI | TGGCCA | 3 cut(s) | 366, 465, 621 |
| MlyI | GAGTC | 1 cut(s) | 1073 |
| MnlI | CCTC | 7 cut(s) | 5, 241, 264, 432, 799, 927, 967 |
| Mox20I | TGGCCA | 3 cut(s) | 366, 465, 621 |
| MroXI | GAANNNNTTC | 1 cut(s) | 226 |
| MscI | TGGCCA | 3 cut(s) | 366, 465, 621 |
| MseI | TTAA | 5 cut(s) | 81, 236, 1125, 1317, 1414 |
| MslI | CAYNNNNRTG | 1 cut(s) | 987 |
| Msp20I | TGGCCA | 3 cut(s) | 366, 465, 621 |
| MspA1I | CMGCKG | 1 cut(s) | 530 |
| MspR9I | CCNGG | 1 cut(s) | 906 |
| Mva1269I | GAATGC | 3 cut(s) | 502, 616, 1093 |
| MvaI | CCWGG | 1 cut(s) | 906 |
| MvnI | CGCG | 1 cut(s) | 1101 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 697, 1107, 1387 |
| NdeI | CATATG | 2 cut(s) | 391, 970 |
| NdeII | GATC | 8 cut(s) | 111, 130, 287, 649, 730, 985, 1192, 1288 |
| NlaIV | GGNNCC | 2 cut(s) | 180, 304 |
| NmuCI | GTSAC | 1 cut(s) | 1012 |
| NsbI | TGCGCA | 1 cut(s) | 615 |
| NspI | RCATGY | 2 cut(s) | 929, 1242 |
| NspV | TTCGAA | 1 cut(s) | 950 |
| PaeR7I | CTCGAG | 1 cut(s) | 9 |
| PagI | TCATGA | 2 cut(s) | 943, 988 |
| PaqCI | CACCTGC | 1 cut(s) | 166 |
| PciI | ACATGT | 1 cut(s) | 925 |
| PctI | GAATGC | 3 cut(s) | 502, 616, 1093 |
| PdmI | GAANNNNTTC | 1 cut(s) | 226 |
| PfeI | GAWTC | 2 cut(s) | 947, 1187 |
| PfoI | TCCNGGA | 1 cut(s) | 904 |
| PkrI | GCNGC | 3 cut(s) | 529, 1030, 1100 |
| PleI | GAGTC | 1 cut(s) | 1072 |
| PmaCI | CACGTG | 1 cut(s) | 1157 |
| PmlI | CACGTG | 1 cut(s) | 1157 |
| PpsI | GAGTC | 1 cut(s) | 1072 |
| Ppu21I | YACGTR | 1 cut(s) | 1157 |
| PscI | ACATGT | 1 cut(s) | 925 |
| PshBI | ATTAAT | 1 cut(s) | 81 |
| Psp6I | CCWGG | 1 cut(s) | 904 |
| PspCI | CACGTG | 1 cut(s) | 1157 |
| PspFI | CCCAGC | 1 cut(s) | 523 |
| PspGI | CCWGG | 1 cut(s) | 904 |
| PspN4I | GGNNCC | 2 cut(s) | 180, 304 |
| PspPI | GGNCC | 1 cut(s) | 1051 |
| PstNI | CAGNNNCTG | 2 cut(s) | 530, 680 |
| PsuI | RGATCY | 2 cut(s) | 111, 649 |
| PvuII | CAGCTG | 1 cut(s) | 530 |
| RsaI | GTAC | 4 cut(s) | 415, 830, 1077, 1243 |
| RsaNI | GTAC | 4 cut(s) | 414, 829, 1076, 1242 |
| RseI | CAYNNNNRTG | 1 cut(s) | 987 |
| SaqAI | TTAA | 5 cut(s) | 81, 236, 1125, 1317, 1414 |
| SatI | GCNGC | 3 cut(s) | 528, 1029, 1099 |
| Sau3AI | GATC | 8 cut(s) | 111, 130, 287, 649, 730, 985, 1192, 1288 |
| Sau96I | GGNCC | 1 cut(s) | 1051 |
| SchI | GAGTC | 1 cut(s) | 1073 |
| ScrFI | CCNGG | 1 cut(s) | 906 |
| SduI | GDGCHC | 2 cut(s) | 702, 1202 |
| SetI | ASST | 8 cut(s) | 163, 180, 454, 532, 663, 810, 1041, 1159 |
| SfaNI | GCATC | 6 cut(s) | 209, 427, 635, 884, 899, 1040 |
| SfcI | CTRYAG | 2 cut(s) | 406, 889 |
| Sfr274I | CTCGAG | 1 cut(s) | 9 |
| SfuI | TTCGAA | 1 cut(s) | 950 |
| SlaI | CTCGAG | 1 cut(s) | 9 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 987 |
| SmlI | CTYRAG | 3 cut(s) | 9, 323, 1304 |
| SmoI | CTYRAG | 3 cut(s) | 9, 323, 1304 |
| Sse9I | AATT | 5 cut(s) | 78, 149, 385, 854, 1314 |
| SsiI | CCGC | 2 cut(s) | 1054, 1099 |
| SspMI | CTAG | 1 cut(s) | 1107 |
| StyD4I | CCNGG | 1 cut(s) | 904 |
| StyI | CCWWGG | 2 cut(s) | 878, 1080 |
| TaaI | ACNGT | 1 cut(s) | 1012 |
| TaiI | ACGT | 3 cut(s) | 454, 1041, 1159 |
| TaqI | TCGA | 3 cut(s) | 10, 608, 950 |
| TasI | AATT | 5 cut(s) | 78, 149, 385, 854, 1314 |
| TauI | GCSGC | 1 cut(s) | 1101 |
| TfiI | GAWTC | 2 cut(s) | 947, 1187 |
| Tru1I | TTAA | 5 cut(s) | 81, 236, 1125, 1317, 1414 |
| Tru9I | TTAA | 5 cut(s) | 81, 236, 1125, 1317, 1414 |
| TscAI | CASTG | 2 cut(s) | 277, 356 |
| TseFI | GTSAC | 1 cut(s) | 1012 |
| TseI | GCWGC | 2 cut(s) | 527, 1028 |
| Tsp45I | GTSAC | 1 cut(s) | 1012 |
| TspDTI | ATGAA | 3 cut(s) | 378, 1134, 1310 |
| TspGWI | ACGGA | 2 cut(s) | 576, 1156 |
| TspRI | CASTG | 2 cut(s) | 277, 356 |
| VspI | ATTAAT | 1 cut(s) | 81 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 105 |
| XapI | RAATTY | 1 cut(s) | 385 |
| XceI | RCATGY | 2 cut(s) | 929, 1242 |
| XhoI | CTCGAG | 1 cut(s) | 9 |
| XmnI | GAANNNNTTC | 1 cut(s) | 226 |
| XspI | CTAG | 1 cut(s) | 1107 |