Prupe.3G202000_v2.0.a1
WRKY Family

WRKY transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
21025351 .. 21029457
4107 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G202000.6

Sequence Viewer

Length: 1461 bp
ATGATTTCTCTAGGGGAACCTGGGACAGATAAAATTGCCTCTGATATAGTACCGAAGAAAGAGAGTTCAAATAGTGAAATTCATGCTCCACATCAAAATCCTGATAATGGGATCTGTCCCCTGCAATCAGATCATAGAGGAAATGTTCAGTCTCTAATACCTGAGAAATCGTTACAGCTGCCTGATGGTGTTGGTACTGCATCTCAATCAAATCAAGAAGGAAGTGTTACGTCTTTAACATCTGAGAAAGCACCACAAACCCCTGAAACCTCTGCCCTTGTCTTGCGATCTGGTCAAGAAGGAAGCACTCCATCTACAGCACGAGAGAGAGGGTTAGAGGATGGTTATCACTGGAGAAAATACGGCCAGAAACTTGTTAAGGGAAATGCATATGTAAGAAGTTACTACAGATGTACGCATCCAAAATGTCCAGTGAAGAGGCAAGTGGAGCGCACACATAATGGGCAGATAACAGATACTGTTTACTTTGGTGAGCATGGACATCCTAAAGCTCAAGTTAGCGTCCCTGTAGCTGTTAGTTTTCTCGTGTCCATTGTCGAAGAAAGACCAGAAGAGCTTTTGTTAACTGGTGTCGAAGGCAAACCATCGGATGTGCATGGCCACACATCTAACCAGATTGAGCCAGTGGATCCCTCTCAGCTATCAACCGTTGCAGATAATGAAGGTGTGCAGAGAGTGCTCTCTCAATCAAATAGAACCAGAGATGGTGATCCAGACTCAAAAAGACAGAAGAAGGAAAAGCATAATGGCAACTCAATTCCGGTGGATAAGCCAGCTGGTGAACCGCGTGTTGTTGTTCAGACTATGAGTGAGGCTGATATAGTGAATGATGGCTACAGGTGGCGCAAATATGGGCAGAAGTTAGTAAAAGGCAATCCAAATCCAAGGAGTTACTACAGATGCTCAAATCCTGGGTGCCCTGTTAAGAAACATGTAGAGAGGGCGTCTCATGATTCAAAAGTTGTTATAGCCACATATGAGGGGCAACACGATCATGATATGCCACCCACAAGGACTGTGACCCACAATGCAGCAGCATCAAATGTGATTACGACGGCCCGTAATGGTGAGTCTGGCACTACATCAGATGGGAATGCCGTCTGCCATGATACTAGCCCAAAACACGAAGATAAACCAAACAAGCAACTTAATGTTGAGCCAAGAACTAAATCAAGTGATGTTGCTGGCTGTGATATGGTCGTTGATTCTGCTCTGGGTCCTGAAAGAAAATTAAATGAGCAAGTGGTTGGCAAAGCATGTACCACAGAAGAAAGTGATGCCCCTGATATAATTGTTCCTAGGGCTAATGAATTGCAAAATGGCGAGTCAGGAATTAAATCAGAAGGCAACAACGCCTGCATTGATACGGTCGTTCACGGCAATCTGTGTCCAGAAAGTAATTCACCGGAGCAAAAAAATCCAAAAGCAGAACCTGTCTAA

Protein Analysis

487

Amino Acids

52.76

Weight (kDa)

6.19

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 936
AccII CGCG 1 cut(s) 808
AciI CCGC 1 cut(s) 806
AclWI GGATC 4 cut(s) 119, 644, 657, 725
AcoI YGGCCR 2 cut(s) 364, 619
AcsI RAATTY 1 cut(s) 78
AcyI GRCGYC 1 cut(s) 965
AfaI GTAC 4 cut(s) 51, 196, 415, 1282
AfiI CCNNNNNNNGG 1 cut(s) 107
AflIII ACRYGT 1 cut(s) 952
AgsI TTSAA 2 cut(s) 69, 978
AjnI CCWGG 2 cut(s) 19, 931
AluBI AGCT 6 cut(s) 178, 512, 533, 577, 661, 797
AluI AGCT 6 cut(s) 178, 512, 533, 577, 661, 797
Alw21I GWGCWC 1 cut(s) 702
Alw26I GTCTC 2 cut(s) 156, 972
AlwI GGATC 4 cut(s) 119, 644, 657, 725
AlwNI CAGNNNCTG 2 cut(s) 479, 1454
AoxI GGCC 3 cut(s) 364, 619, 1077
ApeKI GCWGC 3 cut(s) 178, 1052, 1055
ApoI RAATTY 1 cut(s) 78
AspA2I CCTAGG 1 cut(s) 1319
AspLEI GCGC 2 cut(s) 453, 867
AspS9I GGNCC 2 cut(s) 1078, 1238
AsuHPI GGTGA 5 cut(s) 503, 740, 812, 1100, 1416
AvaII GGWCC 1 cut(s) 1238
AvrII CCTAGG 1 cut(s) 1319
BaeGI GKGCMC 1 cut(s) 941
BaeI ACNNNNGTAYC 2 cut(s) 1377, 1410
BalI TGGCCA 1 cut(s) 621
BamHI GGATCC 1 cut(s) 649
BanI GGYRCC 1 cut(s) 936
BauI CACGAG 2 cut(s) 321, 545
Bbv12I GWGCWC 1 cut(s) 702
BbvI GCAGC 3 cut(s) 165, 1064, 1067
BccI CCATC 7 cut(s) 179, 319, 335, 613, 719, 845, 1103
BceAI ACGGC 4 cut(s) 379, 1092, 1103, 1414
BciT130I CCWGG 2 cut(s) 21, 933
BcoDI GTCTC 2 cut(s) 156, 972
BfaI CTAG 3 cut(s) 11, 1134, 1320
BfmI CTRYAG 5 cut(s) 315, 406, 528, 856, 916
BisI GCNGC 3 cut(s) 179, 1053, 1056
BlnI CCTAGG 1 cut(s) 1319
BlsI GCNGC 3 cut(s) 180, 1054, 1057
Bme1390I CCNGG 2 cut(s) 21, 933
Bme18I GGWCC 1 cut(s) 1238
BmgT120I GGNCC 2 cut(s) 1078, 1238
BmiI GGNNCC 4 cut(s) 18, 651, 938, 1239
BmrFI CCNGG 2 cut(s) 21, 933
BmsI GCATC 5 cut(s) 209, 427, 911, 1067, 1288
BplI GAGNNNNNCTC 2 cut(s) 952, 984
BpmI CTGGAG 1 cut(s) 373
BpuEI CTTGAG 1 cut(s) 498
BsaBI GATNNNNATC 2 cut(s) 345, 729
BsaHI GRCGYC 1 cut(s) 965
BsaJI CCNNGG 4 cut(s) 20, 905, 932, 1319
BsaWI WCCGGW 2 cut(s) 781, 1426
Bsc4I CCNNNNNNNGG 1 cut(s) 107
Bse1I ACTGG 4 cut(s) 356, 431, 592, 644
Bse8I GATNNNNATC 2 cut(s) 345, 729
BseBI CCWGG 2 cut(s) 21, 933
BseDI CCNNGG 4 cut(s) 20, 905, 932, 1319
BseGI GGATG 4 cut(s) 346, 418, 502, 616
BseJI GATNNNNATC 2 cut(s) 345, 729
BseLI CCNNNNNNNGG 1 cut(s) 107
BseMII CTCAG 3 cut(s) 153, 234, 671
BseNI ACTGG 4 cut(s) 356, 431, 592, 644
BseSI GKGCMC 1 cut(s) 941
BseXI GCAGC 3 cut(s) 165, 1064, 1067
BsgI GTGCAG 1 cut(s) 710
Bsh1236I CGCG 1 cut(s) 808
Bsh1285I CGRYCG 1 cut(s) 1392
BshFI GGCC 3 cut(s) 366, 621, 1079
BshNI GGYRCC 1 cut(s) 936
BsiEI CGRYCG 1 cut(s) 1392
BsiHKAI GWGCWC 1 cut(s) 702
BsiSI CCGG 2 cut(s) 782, 1427
BslFI GGGAC 3 cut(s) 37, 102, 509
BslI CCNNNNNNNGG 1 cut(s) 107
BsmAI GTCTC 2 cut(s) 156, 972
BsmBI CGTCTC 1 cut(s) 972
BsmFI GGGAC 3 cut(s) 37, 102, 509
BsmI GAATGC 1 cut(s) 1120
BsnI GGCC 3 cut(s) 366, 621, 1079
Bsp1286I GDGCHC 2 cut(s) 702, 941
Bsp143I GATC 6 cut(s) 111, 130, 287, 649, 730, 1012
BspACI CCGC 1 cut(s) 806
BspANI GGCC 3 cut(s) 366, 621, 1079
BspCNI CTCAG 3 cut(s) 154, 235, 670
BspFNI CGCG 1 cut(s) 808
BspHI TCATGA 2 cut(s) 970, 1015
BspLI GGNNCC 4 cut(s) 18, 651, 938, 1239
BspPI GGATC 4 cut(s) 119, 644, 657, 725
BspQI GCTCTTC 1 cut(s) 567
BspT107I GGYRCC 1 cut(s) 936
BsrI ACTGG 4 cut(s) 356, 431, 592, 644
BssECI CCNNGG 4 cut(s) 20, 905, 932, 1319
BssMI GATC 6 cut(s) 111, 130, 287, 649, 730, 1012
BssNI GRCGYC 1 cut(s) 965
BssSI CACGAG 2 cut(s) 321, 545
BssT1I CCWWGG 2 cut(s) 905, 1319
Bst2BI CACGAG 2 cut(s) 321, 545
Bst2UI CCWGG 2 cut(s) 21, 933
Bst4CI ACNGT 4 cut(s) 481, 670, 1039, 1390
Bst6I CTCTTC 2 cut(s) 431, 567
BstACI GRCGYC 1 cut(s) 965
BstAPI GCANNNNNTGC 1 cut(s) 697
BstC8I GCNNGC 3 cut(s) 795, 1207, 1378
BstDEI CTNAG 3 cut(s) 162, 243, 657
BstF5I GGATG 4 cut(s) 346, 418, 502, 616
BstFNI CGCG 1 cut(s) 808
BstHHI GCGC 2 cut(s) 453, 867
BstKTI GATC 6 cut(s) 114, 133, 290, 652, 733, 1015
BstMAI GTCTC 2 cut(s) 156, 972
BstMBI GATC 6 cut(s) 111, 130, 287, 649, 730, 1012
BstMCI CGRYCG 1 cut(s) 1392
BstMWI GCNNNNNNNGC 2 cut(s) 448, 697
BstNI CCWGG 2 cut(s) 21, 933
BstNSI RCATGY 2 cut(s) 956, 1281
BstSCI CCNGG 2 cut(s) 19, 931
BstSFI CTRYAG 5 cut(s) 315, 406, 528, 856, 916
BstSLI GKGCMC 1 cut(s) 941
BstUI CGCG 1 cut(s) 808
BstV1I GCAGC 3 cut(s) 165, 1064, 1067
BstX2I RGATCY 2 cut(s) 111, 649
BstYI RGATCY 2 cut(s) 111, 649
BsuRI GGCC 3 cut(s) 366, 621, 1079
BtsCI GGATG 4 cut(s) 346, 418, 502, 616
BtsIMutI CAGTG 3 cut(s) 349, 438, 651
Cac8I GCNNGC 3 cut(s) 795, 1207, 1378
CaiI CAGNNNCTG 2 cut(s) 479, 1454
CciI TCATGA 2 cut(s) 970, 1015
CfoI GCGC 2 cut(s) 453, 867
Cfr13I GGNCC 2 cut(s) 1078, 1238
CseI GACGC 2 cut(s) 511, 954
Csp6I GTAC 4 cut(s) 50, 195, 414, 1281
CspCI CAANNNNNGTGG 2 cut(s) 765, 800
CviAII CATG 8 cut(s) 83, 497, 617, 953, 971, 1016, 1127, 1278
CviQI GTAC 4 cut(s) 50, 195, 414, 1281
DdeI CTNAG 3 cut(s) 162, 243, 657
DpnI GATC 6 cut(s) 113, 132, 289, 651, 732, 1014
DpnII GATC 6 cut(s) 111, 130, 287, 649, 730, 1012
EaeI YGGCCR 2 cut(s) 364, 619
Eam1104I CTCTTC 2 cut(s) 431, 567
EarI CTCTTC 2 cut(s) 431, 567
Eco130I CCWWGG 2 cut(s) 905, 1319
Eco47I GGWCC 1 cut(s) 1238
EcoO109I RGGNCCY 1 cut(s) 1238
EcoRII CCWGG 2 cut(s) 19, 931
EcoT14I CCWWGG 2 cut(s) 905, 1319
EcoT22I ATGCAT 1 cut(s) 391
ErhI CCWWGG 2 cut(s) 905, 1319
Esp3I CGTCTC 1 cut(s) 972
FaeI CATG 8 cut(s) 86, 500, 620, 956, 974, 1019, 1130, 1281
FaqI GGGAC 3 cut(s) 37, 102, 509
FatI CATG 8 cut(s) 82, 496, 616, 952, 970, 1015, 1126, 1277
FauNDI CATATG 2 cut(s) 391, 997
Fnu4HI GCNGC 3 cut(s) 179, 1053, 1056
FokI GGATG 4 cut(s) 353, 405, 489, 623
Fsp4HI GCNGC 3 cut(s) 179, 1053, 1056
FspBI CTAG 3 cut(s) 11, 1134, 1320
GlaI GCGC 2 cut(s) 452, 866
GluI GCNGC 3 cut(s) 179, 1053, 1056
GsuI CTGGAG 1 cut(s) 373
HaeIII GGCC 3 cut(s) 366, 621, 1079
HapII CCGG 2 cut(s) 782, 1427
HgaI GACGC 2 cut(s) 511, 954
HhaI GCGC 2 cut(s) 453, 867
Hin1I GRCGYC 1 cut(s) 965
Hin1II CATG 8 cut(s) 86, 500, 620, 956, 974, 1019, 1130, 1281
Hin6I GCGC 2 cut(s) 451, 865
HinP1I GCGC 2 cut(s) 451, 865
HincII GTYRAC 1 cut(s) 585
HindII GTYRAC 1 cut(s) 585
HinfI GANTC 5 cut(s) 737, 974, 1091, 1226, 1346
HpaI GTTAAC 1 cut(s) 585
HpaII CCGG 2 cut(s) 782, 1427
HphI GGTGA 5 cut(s) 503, 740, 812, 1100, 1416
Hpy166II GTNNAC 4 cut(s) 484, 585, 803, 1396
Hpy188I TCNGA 7 cut(s) 43, 130, 244, 610, 822, 1108, 1363
Hpy188III TCNNGA 9 cut(s) 101, 215, 296, 734, 971, 1016, 1241, 1350, 1412
Hpy8I GTNNAC 4 cut(s) 484, 585, 803, 1396
Hpy99I CGWCG 1 cut(s) 1078
HpyAV CCTTC 6 cut(s) 212, 293, 590, 677, 748, 1358
HpyCH4III ACNGT 4 cut(s) 481, 670, 1039, 1390
HpyCH4IV ACGT 1 cut(s) 230
HpyCH4V TGCA 9 cut(s) 124, 200, 389, 616, 674, 691, 1052, 1336, 1380
HpyF10VI GCNNNNNNNGC 2 cut(s) 448, 697
HpyF3I CTNAG 3 cut(s) 162, 243, 657
HpySE526I ACGT 1 cut(s) 230
Hsp92I GRCGYC 1 cut(s) 965
Hsp92II CATG 8 cut(s) 86, 500, 620, 956, 974, 1019, 1130, 1281
HspAI GCGC 2 cut(s) 451, 865
KspAI GTTAAC 1 cut(s) 585
Kzo9I GATC 6 cut(s) 111, 130, 287, 649, 730, 1012
LguI GCTCTTC 1 cut(s) 567
LmnI GCTCC 3 cut(s) 91, 448, 1429
Lsp1109I GCAGC 3 cut(s) 165, 1064, 1067
LweI GCATC 5 cut(s) 209, 427, 911, 1067, 1288
MaeI CTAG 3 cut(s) 11, 1134, 1320
MaeII ACGT 1 cut(s) 230
MaeIII GTNAC 5 cut(s) 171, 226, 401, 911, 1039
MalI GATC 6 cut(s) 113, 132, 289, 651, 732, 1014
MboI GATC 6 cut(s) 111, 130, 287, 649, 730, 1012
MboII GAAGA 7 cut(s) 67, 448, 572, 584, 763, 1160, 1301
MflI RGATCY 2 cut(s) 111, 649
MhlI GDGCHC 2 cut(s) 702, 941
MlsI TGGCCA 1 cut(s) 621
MluCI AATT 8 cut(s) 33, 78, 777, 1250, 1311, 1331, 1353, 1420
MluNI TGGCCA 1 cut(s) 621
MlyI GAGTC 3 cut(s) 731, 1100, 1355
Mox20I TGGCCA 1 cut(s) 621
Mph1103I ATGCAT 1 cut(s) 391
MscI TGGCCA 1 cut(s) 621
MseI TTAA 7 cut(s) 236, 378, 584, 945, 1170, 1253, 1356
MslI CAYNNNNRTG 1 cut(s) 1014
Msp20I TGGCCA 1 cut(s) 621
MspA1I CMGCKG 2 cut(s) 178, 797
MspI CCGG 2 cut(s) 782, 1427
MspR9I CCNGG 2 cut(s) 21, 933
Mva1269I GAATGC 1 cut(s) 1120
MvaI CCWGG 2 cut(s) 21, 933
MvnI CGCG 1 cut(s) 808
MwoI GCNNNNNNNGC 2 cut(s) 448, 697
NdeI CATATG 2 cut(s) 391, 997
NdeII GATC 6 cut(s) 111, 130, 287, 649, 730, 1012
NlaIII CATG 8 cut(s) 86, 500, 620, 956, 974, 1019, 1130, 1281
NlaIV GGNNCC 4 cut(s) 18, 651, 938, 1239
NmuCI GTSAC 1 cut(s) 1039
NsiI ATGCAT 1 cut(s) 391
NspI RCATGY 2 cut(s) 956, 1281
PagI TCATGA 2 cut(s) 970, 1015
PciI ACATGT 1 cut(s) 952
PciSI GCTCTTC 1 cut(s) 567
PctI GAATGC 1 cut(s) 1120
PfeI GAWTC 2 cut(s) 974, 1226
PkrI GCNGC 3 cut(s) 180, 1054, 1057
PleI GAGTC 3 cut(s) 731, 1099, 1354
PpsI GAGTC 3 cut(s) 731, 1099, 1354
PpuMI RGGWCCY 1 cut(s) 1238
PscI ACATGT 1 cut(s) 952
Psp5II RGGWCCY 1 cut(s) 1238
Psp6I CCWGG 2 cut(s) 19, 931
PspGI CCWGG 2 cut(s) 19, 931
PspN4I GGNNCC 4 cut(s) 18, 651, 938, 1239
PspPI GGNCC 2 cut(s) 1078, 1238
PspPPI RGGWCCY 1 cut(s) 1238
PstNI CAGNNNCTG 2 cut(s) 479, 1454
PsuI RGATCY 2 cut(s) 111, 649
PvuII CAGCTG 2 cut(s) 178, 797
RsaI GTAC 4 cut(s) 51, 196, 415, 1282
RsaNI GTAC 4 cut(s) 50, 195, 414, 1281
RseI CAYNNNNRTG 1 cut(s) 1014
SapI GCTCTTC 1 cut(s) 567
SaqAI TTAA 7 cut(s) 236, 378, 584, 945, 1170, 1253, 1356
SatI GCNGC 3 cut(s) 179, 1053, 1056
Sau3AI GATC 6 cut(s) 111, 130, 287, 649, 730, 1012
Sau96I GGNCC 2 cut(s) 1078, 1238
SchI GAGTC 3 cut(s) 731, 1100, 1355
ScrFI CCNGG 2 cut(s) 21, 933
SduI GDGCHC 2 cut(s) 702, 941
SfaNI GCATC 5 cut(s) 209, 427, 911, 1067, 1288
SfcI CTRYAG 5 cut(s) 315, 406, 528, 856, 916
SinI GGWCC 1 cut(s) 1238
SmiMI CAYNNNNRTG 1 cut(s) 1014
SmlI CTYRAG 1 cut(s) 513
SmoI CTYRAG 1 cut(s) 513
Sse9I AATT 8 cut(s) 33, 78, 777, 1250, 1311, 1331, 1353, 1420
SsiI CCGC 1 cut(s) 806
SspMI CTAG 3 cut(s) 11, 1134, 1320
StyD4I CCNGG 2 cut(s) 19, 931
StyI CCWWGG 2 cut(s) 905, 1319
TaaI ACNGT 4 cut(s) 481, 670, 1039, 1390
TaiI ACGT 1 cut(s) 233
TaqI TCGA 2 cut(s) 558, 594
TasI AATT 8 cut(s) 33, 78, 777, 1250, 1311, 1331, 1353, 1420
TfiI GAWTC 2 cut(s) 974, 1226
Tru1I TTAA 7 cut(s) 236, 378, 584, 945, 1170, 1253, 1356
Tru9I TTAA 7 cut(s) 236, 378, 584, 945, 1170, 1253, 1356
TscAI CASTG 3 cut(s) 356, 438, 651
TseFI GTSAC 1 cut(s) 1039
TseI GCWGC 3 cut(s) 178, 1052, 1055
Tsp45I GTSAC 1 cut(s) 1039
TspDTI ATGAA 3 cut(s) 71, 696, 1344
TspRI CASTG 3 cut(s) 356, 438, 651
VpaK11BI GGWCC 1 cut(s) 1238
XapI RAATTY 1 cut(s) 78
XceI RCATGY 2 cut(s) 956, 1281
XmaJI CCTAGG 1 cut(s) 1319
XspI CTAG 3 cut(s) 11, 1134, 1320
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.