WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G04880 AT2G04880 |
| fragaria_vesca | FvH4_6g41210 |
| malus_domestica | MD09G1121600.v1.1 MD17G1112600.v1.1 |
| prunus_persica | Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 Prupe.3G202000_v2.0.a1 |
| pyrus_communis | pycom09g04600 pycom17g10430 |
| rosa_chinensis | RchiOBHm_Chr2g0156771 |
| rosa_laevigata | RLG00000020940 |
| rosa_multiflora | Rmu_sc0008149.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00092740 |
| rosa_rugosa | Rorug02G0456100 Rorug02G0456100 |
| rosa_samantha | Rh2AG521500 Rh2BG535000 Rh2CG506400 Rh2DG544000 |
| rosa_wichuraiana | Rw2G043060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 936 |
| AccII | CGCG | 1 cut(s) | 808 |
| AciI | CCGC | 1 cut(s) | 806 |
| AclWI | GGATC | 4 cut(s) | 119, 644, 657, 725 |
| AcoI | YGGCCR | 2 cut(s) | 364, 619 |
| AcsI | RAATTY | 1 cut(s) | 78 |
| AcyI | GRCGYC | 1 cut(s) | 965 |
| AfaI | GTAC | 4 cut(s) | 51, 196, 415, 1282 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 107 |
| AflIII | ACRYGT | 1 cut(s) | 952 |
| AgsI | TTSAA | 2 cut(s) | 69, 978 |
| AjnI | CCWGG | 2 cut(s) | 19, 931 |
| AluBI | AGCT | 6 cut(s) | 178, 512, 533, 577, 661, 797 |
| AluI | AGCT | 6 cut(s) | 178, 512, 533, 577, 661, 797 |
| Alw21I | GWGCWC | 1 cut(s) | 702 |
| Alw26I | GTCTC | 2 cut(s) | 156, 972 |
| AlwI | GGATC | 4 cut(s) | 119, 644, 657, 725 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 479, 1454 |
| AoxI | GGCC | 3 cut(s) | 364, 619, 1077 |
| ApeKI | GCWGC | 3 cut(s) | 178, 1052, 1055 |
| ApoI | RAATTY | 1 cut(s) | 78 |
| AspA2I | CCTAGG | 1 cut(s) | 1319 |
| AspLEI | GCGC | 2 cut(s) | 453, 867 |
| AspS9I | GGNCC | 2 cut(s) | 1078, 1238 |
| AsuHPI | GGTGA | 5 cut(s) | 503, 740, 812, 1100, 1416 |
| AvaII | GGWCC | 1 cut(s) | 1238 |
| AvrII | CCTAGG | 1 cut(s) | 1319 |
| BaeGI | GKGCMC | 1 cut(s) | 941 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1377, 1410 |
| BalI | TGGCCA | 1 cut(s) | 621 |
| BamHI | GGATCC | 1 cut(s) | 649 |
| BanI | GGYRCC | 1 cut(s) | 936 |
| BauI | CACGAG | 2 cut(s) | 321, 545 |
| Bbv12I | GWGCWC | 1 cut(s) | 702 |
| BbvI | GCAGC | 3 cut(s) | 165, 1064, 1067 |
| BccI | CCATC | 7 cut(s) | 179, 319, 335, 613, 719, 845, 1103 |
| BceAI | ACGGC | 4 cut(s) | 379, 1092, 1103, 1414 |
| BciT130I | CCWGG | 2 cut(s) | 21, 933 |
| BcoDI | GTCTC | 2 cut(s) | 156, 972 |
| BfaI | CTAG | 3 cut(s) | 11, 1134, 1320 |
| BfmI | CTRYAG | 5 cut(s) | 315, 406, 528, 856, 916 |
| BisI | GCNGC | 3 cut(s) | 179, 1053, 1056 |
| BlnI | CCTAGG | 1 cut(s) | 1319 |
| BlsI | GCNGC | 3 cut(s) | 180, 1054, 1057 |
| Bme1390I | CCNGG | 2 cut(s) | 21, 933 |
| Bme18I | GGWCC | 1 cut(s) | 1238 |
| BmgT120I | GGNCC | 2 cut(s) | 1078, 1238 |
| BmiI | GGNNCC | 4 cut(s) | 18, 651, 938, 1239 |
| BmrFI | CCNGG | 2 cut(s) | 21, 933 |
| BmsI | GCATC | 5 cut(s) | 209, 427, 911, 1067, 1288 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 952, 984 |
| BpmI | CTGGAG | 1 cut(s) | 373 |
| BpuEI | CTTGAG | 1 cut(s) | 498 |
| BsaBI | GATNNNNATC | 2 cut(s) | 345, 729 |
| BsaHI | GRCGYC | 1 cut(s) | 965 |
| BsaJI | CCNNGG | 4 cut(s) | 20, 905, 932, 1319 |
| BsaWI | WCCGGW | 2 cut(s) | 781, 1426 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 107 |
| Bse1I | ACTGG | 4 cut(s) | 356, 431, 592, 644 |
| Bse8I | GATNNNNATC | 2 cut(s) | 345, 729 |
| BseBI | CCWGG | 2 cut(s) | 21, 933 |
| BseDI | CCNNGG | 4 cut(s) | 20, 905, 932, 1319 |
| BseGI | GGATG | 4 cut(s) | 346, 418, 502, 616 |
| BseJI | GATNNNNATC | 2 cut(s) | 345, 729 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 107 |
| BseMII | CTCAG | 3 cut(s) | 153, 234, 671 |
| BseNI | ACTGG | 4 cut(s) | 356, 431, 592, 644 |
| BseSI | GKGCMC | 1 cut(s) | 941 |
| BseXI | GCAGC | 3 cut(s) | 165, 1064, 1067 |
| BsgI | GTGCAG | 1 cut(s) | 710 |
| Bsh1236I | CGCG | 1 cut(s) | 808 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1392 |
| BshFI | GGCC | 3 cut(s) | 366, 621, 1079 |
| BshNI | GGYRCC | 1 cut(s) | 936 |
| BsiEI | CGRYCG | 1 cut(s) | 1392 |
| BsiHKAI | GWGCWC | 1 cut(s) | 702 |
| BsiSI | CCGG | 2 cut(s) | 782, 1427 |
| BslFI | GGGAC | 3 cut(s) | 37, 102, 509 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 107 |
| BsmAI | GTCTC | 2 cut(s) | 156, 972 |
| BsmBI | CGTCTC | 1 cut(s) | 972 |
| BsmFI | GGGAC | 3 cut(s) | 37, 102, 509 |
| BsmI | GAATGC | 1 cut(s) | 1120 |
| BsnI | GGCC | 3 cut(s) | 366, 621, 1079 |
| Bsp1286I | GDGCHC | 2 cut(s) | 702, 941 |
| Bsp143I | GATC | 6 cut(s) | 111, 130, 287, 649, 730, 1012 |
| BspACI | CCGC | 1 cut(s) | 806 |
| BspANI | GGCC | 3 cut(s) | 366, 621, 1079 |
| BspCNI | CTCAG | 3 cut(s) | 154, 235, 670 |
| BspFNI | CGCG | 1 cut(s) | 808 |
| BspHI | TCATGA | 2 cut(s) | 970, 1015 |
| BspLI | GGNNCC | 4 cut(s) | 18, 651, 938, 1239 |
| BspPI | GGATC | 4 cut(s) | 119, 644, 657, 725 |
| BspQI | GCTCTTC | 1 cut(s) | 567 |
| BspT107I | GGYRCC | 1 cut(s) | 936 |
| BsrI | ACTGG | 4 cut(s) | 356, 431, 592, 644 |
| BssECI | CCNNGG | 4 cut(s) | 20, 905, 932, 1319 |
| BssMI | GATC | 6 cut(s) | 111, 130, 287, 649, 730, 1012 |
| BssNI | GRCGYC | 1 cut(s) | 965 |
| BssSI | CACGAG | 2 cut(s) | 321, 545 |
| BssT1I | CCWWGG | 2 cut(s) | 905, 1319 |
| Bst2BI | CACGAG | 2 cut(s) | 321, 545 |
| Bst2UI | CCWGG | 2 cut(s) | 21, 933 |
| Bst4CI | ACNGT | 4 cut(s) | 481, 670, 1039, 1390 |
| Bst6I | CTCTTC | 2 cut(s) | 431, 567 |
| BstACI | GRCGYC | 1 cut(s) | 965 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 697 |
| BstC8I | GCNNGC | 3 cut(s) | 795, 1207, 1378 |
| BstDEI | CTNAG | 3 cut(s) | 162, 243, 657 |
| BstF5I | GGATG | 4 cut(s) | 346, 418, 502, 616 |
| BstFNI | CGCG | 1 cut(s) | 808 |
| BstHHI | GCGC | 2 cut(s) | 453, 867 |
| BstKTI | GATC | 6 cut(s) | 114, 133, 290, 652, 733, 1015 |
| BstMAI | GTCTC | 2 cut(s) | 156, 972 |
| BstMBI | GATC | 6 cut(s) | 111, 130, 287, 649, 730, 1012 |
| BstMCI | CGRYCG | 1 cut(s) | 1392 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 448, 697 |
| BstNI | CCWGG | 2 cut(s) | 21, 933 |
| BstNSI | RCATGY | 2 cut(s) | 956, 1281 |
| BstSCI | CCNGG | 2 cut(s) | 19, 931 |
| BstSFI | CTRYAG | 5 cut(s) | 315, 406, 528, 856, 916 |
| BstSLI | GKGCMC | 1 cut(s) | 941 |
| BstUI | CGCG | 1 cut(s) | 808 |
| BstV1I | GCAGC | 3 cut(s) | 165, 1064, 1067 |
| BstX2I | RGATCY | 2 cut(s) | 111, 649 |
| BstYI | RGATCY | 2 cut(s) | 111, 649 |
| BsuRI | GGCC | 3 cut(s) | 366, 621, 1079 |
| BtsCI | GGATG | 4 cut(s) | 346, 418, 502, 616 |
| BtsIMutI | CAGTG | 3 cut(s) | 349, 438, 651 |
| Cac8I | GCNNGC | 3 cut(s) | 795, 1207, 1378 |
| CaiI | CAGNNNCTG | 2 cut(s) | 479, 1454 |
| CciI | TCATGA | 2 cut(s) | 970, 1015 |
| CfoI | GCGC | 2 cut(s) | 453, 867 |
| Cfr13I | GGNCC | 2 cut(s) | 1078, 1238 |
| CseI | GACGC | 2 cut(s) | 511, 954 |
| Csp6I | GTAC | 4 cut(s) | 50, 195, 414, 1281 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 765, 800 |
| CviAII | CATG | 8 cut(s) | 83, 497, 617, 953, 971, 1016, 1127, 1278 |
| CviQI | GTAC | 4 cut(s) | 50, 195, 414, 1281 |
| DdeI | CTNAG | 3 cut(s) | 162, 243, 657 |
| DpnI | GATC | 6 cut(s) | 113, 132, 289, 651, 732, 1014 |
| DpnII | GATC | 6 cut(s) | 111, 130, 287, 649, 730, 1012 |
| EaeI | YGGCCR | 2 cut(s) | 364, 619 |
| Eam1104I | CTCTTC | 2 cut(s) | 431, 567 |
| EarI | CTCTTC | 2 cut(s) | 431, 567 |
| Eco130I | CCWWGG | 2 cut(s) | 905, 1319 |
| Eco47I | GGWCC | 1 cut(s) | 1238 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1238 |
| EcoRII | CCWGG | 2 cut(s) | 19, 931 |
| EcoT14I | CCWWGG | 2 cut(s) | 905, 1319 |
| EcoT22I | ATGCAT | 1 cut(s) | 391 |
| ErhI | CCWWGG | 2 cut(s) | 905, 1319 |
| Esp3I | CGTCTC | 1 cut(s) | 972 |
| FaeI | CATG | 8 cut(s) | 86, 500, 620, 956, 974, 1019, 1130, 1281 |
| FaqI | GGGAC | 3 cut(s) | 37, 102, 509 |
| FatI | CATG | 8 cut(s) | 82, 496, 616, 952, 970, 1015, 1126, 1277 |
| FauNDI | CATATG | 2 cut(s) | 391, 997 |
| Fnu4HI | GCNGC | 3 cut(s) | 179, 1053, 1056 |
| FokI | GGATG | 4 cut(s) | 353, 405, 489, 623 |
| Fsp4HI | GCNGC | 3 cut(s) | 179, 1053, 1056 |
| FspBI | CTAG | 3 cut(s) | 11, 1134, 1320 |
| GlaI | GCGC | 2 cut(s) | 452, 866 |
| GluI | GCNGC | 3 cut(s) | 179, 1053, 1056 |
| GsuI | CTGGAG | 1 cut(s) | 373 |
| HaeIII | GGCC | 3 cut(s) | 366, 621, 1079 |
| HapII | CCGG | 2 cut(s) | 782, 1427 |
| HgaI | GACGC | 2 cut(s) | 511, 954 |
| HhaI | GCGC | 2 cut(s) | 453, 867 |
| Hin1I | GRCGYC | 1 cut(s) | 965 |
| Hin1II | CATG | 8 cut(s) | 86, 500, 620, 956, 974, 1019, 1130, 1281 |
| Hin6I | GCGC | 2 cut(s) | 451, 865 |
| HinP1I | GCGC | 2 cut(s) | 451, 865 |
| HincII | GTYRAC | 1 cut(s) | 585 |
| HindII | GTYRAC | 1 cut(s) | 585 |
| HinfI | GANTC | 5 cut(s) | 737, 974, 1091, 1226, 1346 |
| HpaI | GTTAAC | 1 cut(s) | 585 |
| HpaII | CCGG | 2 cut(s) | 782, 1427 |
| HphI | GGTGA | 5 cut(s) | 503, 740, 812, 1100, 1416 |
| Hpy166II | GTNNAC | 4 cut(s) | 484, 585, 803, 1396 |
| Hpy188I | TCNGA | 7 cut(s) | 43, 130, 244, 610, 822, 1108, 1363 |
| Hpy188III | TCNNGA | 9 cut(s) | 101, 215, 296, 734, 971, 1016, 1241, 1350, 1412 |
| Hpy8I | GTNNAC | 4 cut(s) | 484, 585, 803, 1396 |
| Hpy99I | CGWCG | 1 cut(s) | 1078 |
| HpyAV | CCTTC | 6 cut(s) | 212, 293, 590, 677, 748, 1358 |
| HpyCH4III | ACNGT | 4 cut(s) | 481, 670, 1039, 1390 |
| HpyCH4IV | ACGT | 1 cut(s) | 230 |
| HpyCH4V | TGCA | 9 cut(s) | 124, 200, 389, 616, 674, 691, 1052, 1336, 1380 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 448, 697 |
| HpyF3I | CTNAG | 3 cut(s) | 162, 243, 657 |
| HpySE526I | ACGT | 1 cut(s) | 230 |
| Hsp92I | GRCGYC | 1 cut(s) | 965 |
| Hsp92II | CATG | 8 cut(s) | 86, 500, 620, 956, 974, 1019, 1130, 1281 |
| HspAI | GCGC | 2 cut(s) | 451, 865 |
| KspAI | GTTAAC | 1 cut(s) | 585 |
| Kzo9I | GATC | 6 cut(s) | 111, 130, 287, 649, 730, 1012 |
| LguI | GCTCTTC | 1 cut(s) | 567 |
| LmnI | GCTCC | 3 cut(s) | 91, 448, 1429 |
| Lsp1109I | GCAGC | 3 cut(s) | 165, 1064, 1067 |
| LweI | GCATC | 5 cut(s) | 209, 427, 911, 1067, 1288 |
| MaeI | CTAG | 3 cut(s) | 11, 1134, 1320 |
| MaeII | ACGT | 1 cut(s) | 230 |
| MaeIII | GTNAC | 5 cut(s) | 171, 226, 401, 911, 1039 |
| MalI | GATC | 6 cut(s) | 113, 132, 289, 651, 732, 1014 |
| MboI | GATC | 6 cut(s) | 111, 130, 287, 649, 730, 1012 |
| MboII | GAAGA | 7 cut(s) | 67, 448, 572, 584, 763, 1160, 1301 |
| MflI | RGATCY | 2 cut(s) | 111, 649 |
| MhlI | GDGCHC | 2 cut(s) | 702, 941 |
| MlsI | TGGCCA | 1 cut(s) | 621 |
| MluCI | AATT | 8 cut(s) | 33, 78, 777, 1250, 1311, 1331, 1353, 1420 |
| MluNI | TGGCCA | 1 cut(s) | 621 |
| MlyI | GAGTC | 3 cut(s) | 731, 1100, 1355 |
| Mox20I | TGGCCA | 1 cut(s) | 621 |
| Mph1103I | ATGCAT | 1 cut(s) | 391 |
| MscI | TGGCCA | 1 cut(s) | 621 |
| MseI | TTAA | 7 cut(s) | 236, 378, 584, 945, 1170, 1253, 1356 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1014 |
| Msp20I | TGGCCA | 1 cut(s) | 621 |
| MspA1I | CMGCKG | 2 cut(s) | 178, 797 |
| MspI | CCGG | 2 cut(s) | 782, 1427 |
| MspR9I | CCNGG | 2 cut(s) | 21, 933 |
| Mva1269I | GAATGC | 1 cut(s) | 1120 |
| MvaI | CCWGG | 2 cut(s) | 21, 933 |
| MvnI | CGCG | 1 cut(s) | 808 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 448, 697 |
| NdeI | CATATG | 2 cut(s) | 391, 997 |
| NdeII | GATC | 6 cut(s) | 111, 130, 287, 649, 730, 1012 |
| NlaIII | CATG | 8 cut(s) | 86, 500, 620, 956, 974, 1019, 1130, 1281 |
| NlaIV | GGNNCC | 4 cut(s) | 18, 651, 938, 1239 |
| NmuCI | GTSAC | 1 cut(s) | 1039 |
| NsiI | ATGCAT | 1 cut(s) | 391 |
| NspI | RCATGY | 2 cut(s) | 956, 1281 |
| PagI | TCATGA | 2 cut(s) | 970, 1015 |
| PciI | ACATGT | 1 cut(s) | 952 |
| PciSI | GCTCTTC | 1 cut(s) | 567 |
| PctI | GAATGC | 1 cut(s) | 1120 |
| PfeI | GAWTC | 2 cut(s) | 974, 1226 |
| PkrI | GCNGC | 3 cut(s) | 180, 1054, 1057 |
| PleI | GAGTC | 3 cut(s) | 731, 1099, 1354 |
| PpsI | GAGTC | 3 cut(s) | 731, 1099, 1354 |
| PpuMI | RGGWCCY | 1 cut(s) | 1238 |
| PscI | ACATGT | 1 cut(s) | 952 |
| Psp5II | RGGWCCY | 1 cut(s) | 1238 |
| Psp6I | CCWGG | 2 cut(s) | 19, 931 |
| PspGI | CCWGG | 2 cut(s) | 19, 931 |
| PspN4I | GGNNCC | 4 cut(s) | 18, 651, 938, 1239 |
| PspPI | GGNCC | 2 cut(s) | 1078, 1238 |
| PspPPI | RGGWCCY | 1 cut(s) | 1238 |
| PstNI | CAGNNNCTG | 2 cut(s) | 479, 1454 |
| PsuI | RGATCY | 2 cut(s) | 111, 649 |
| PvuII | CAGCTG | 2 cut(s) | 178, 797 |
| RsaI | GTAC | 4 cut(s) | 51, 196, 415, 1282 |
| RsaNI | GTAC | 4 cut(s) | 50, 195, 414, 1281 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1014 |
| SapI | GCTCTTC | 1 cut(s) | 567 |
| SaqAI | TTAA | 7 cut(s) | 236, 378, 584, 945, 1170, 1253, 1356 |
| SatI | GCNGC | 3 cut(s) | 179, 1053, 1056 |
| Sau3AI | GATC | 6 cut(s) | 111, 130, 287, 649, 730, 1012 |
| Sau96I | GGNCC | 2 cut(s) | 1078, 1238 |
| SchI | GAGTC | 3 cut(s) | 731, 1100, 1355 |
| ScrFI | CCNGG | 2 cut(s) | 21, 933 |
| SduI | GDGCHC | 2 cut(s) | 702, 941 |
| SfaNI | GCATC | 5 cut(s) | 209, 427, 911, 1067, 1288 |
| SfcI | CTRYAG | 5 cut(s) | 315, 406, 528, 856, 916 |
| SinI | GGWCC | 1 cut(s) | 1238 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1014 |
| SmlI | CTYRAG | 1 cut(s) | 513 |
| SmoI | CTYRAG | 1 cut(s) | 513 |
| Sse9I | AATT | 8 cut(s) | 33, 78, 777, 1250, 1311, 1331, 1353, 1420 |
| SsiI | CCGC | 1 cut(s) | 806 |
| SspMI | CTAG | 3 cut(s) | 11, 1134, 1320 |
| StyD4I | CCNGG | 2 cut(s) | 19, 931 |
| StyI | CCWWGG | 2 cut(s) | 905, 1319 |
| TaaI | ACNGT | 4 cut(s) | 481, 670, 1039, 1390 |
| TaiI | ACGT | 1 cut(s) | 233 |
| TaqI | TCGA | 2 cut(s) | 558, 594 |
| TasI | AATT | 8 cut(s) | 33, 78, 777, 1250, 1311, 1331, 1353, 1420 |
| TfiI | GAWTC | 2 cut(s) | 974, 1226 |
| Tru1I | TTAA | 7 cut(s) | 236, 378, 584, 945, 1170, 1253, 1356 |
| Tru9I | TTAA | 7 cut(s) | 236, 378, 584, 945, 1170, 1253, 1356 |
| TscAI | CASTG | 3 cut(s) | 356, 438, 651 |
| TseFI | GTSAC | 1 cut(s) | 1039 |
| TseI | GCWGC | 3 cut(s) | 178, 1052, 1055 |
| Tsp45I | GTSAC | 1 cut(s) | 1039 |
| TspDTI | ATGAA | 3 cut(s) | 71, 696, 1344 |
| TspRI | CASTG | 3 cut(s) | 356, 438, 651 |
| VpaK11BI | GGWCC | 1 cut(s) | 1238 |
| XapI | RAATTY | 1 cut(s) | 78 |
| XceI | RCATGY | 2 cut(s) | 956, 1281 |
| XmaJI | CCTAGG | 1 cut(s) | 1319 |
| XspI | CTAG | 3 cut(s) | 11, 1134, 1320 |
| Zsp2I | ATGCAT | 1 cut(s) | 391 |