Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0009323

Physical Location & Seq

Genomic Coordinates Reverse (-)

13015553 .. 13021904

Gene Structure 6352 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1144400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGGCTTCGGCGAAGACGGCCCGGTCGAGAGGCGCGCCGGTTAAAGAGAATGGCGTCAAGCTCGAGGAAGGCCTCAATGTCTTCAAGTCTGACAAGTTCGATTCCCAGAGCTACGTCCAGTCACGATGCTCCCTCAACGAGAAGGATATAAGACAATTATGTTCATATCTTTTGGACTTGAAGAGAGCTTCCGCCGAGGAAATGCGTAGAAGTGTCTATGCTAACTATTCAGCATTCATACGCACCTCCAAAGAGATATCAGATTTGGAGGGAGAGCTATCCTCTATCAGAAACCTGCTATCCACTCAAGCTGCTTTGATTCATGGTCTAGCTGAGGGAGTAAACATCGATTCCCTATCTAAATCTGTTCCTGAAGGTTCTAGTGAAAATGGTGTATTAAGTTTTGAAGATAGAGATCCTACAGACCTGGAGAAATGGTTAATAGAATTTCCTGATCTCTTGGATGTTCTATTAGCGGAAAGGAGAGTGGATGAAGCTTTAGATGCCCTAGATGAAGGTGAACGCGTGGCTGCTGAAGCAAAACAACTGAAGAAGTTGGATCAAGCTTTACTCGTGTCTCTGCAGACTTCCATTGTTGAACGCAGGCAAAAGTTAGCTGACCAGCTTGCTGAGGCTGCTTGCCAGCCTTCTACGCGTGGTGGTGAACTTCGTGCAGCTATCTCAGCACTGAAAAGGCTTGGGGATGGCCCTCGTGCACACAGTTTGCTGCTCAATGCACATTTCCAAAGATATCAGTATAATATGCAAAGCCTTCGTCCATCAAGCACCTCATATGGAGGAGCTTATACTGCTGCACTCTCACAGTTGGTGTTCTCTGCTATTGCTCAAGCTGCCAGTGATTCGTCAGCGATATTTGGCAAGGAACCAAATTATATTTCAGAGCTTGTGATGTGGGCAATAAACCAAACCGAGGCTTTTGCCTCTCTTACTAAAAGACATGCATTAGCATCATCAGCTGCTGCTGGGGGGTTAAGAGCTGCTGCAGAGTGTGTTCAAATTGCATTAGGCCATTGTTCCTTGTTGGAAGCTCGTGGTTTGGCACTTTGTCCTGTACTTTTGAAACTCTTTAGGCCTAGTGTTGAACAAGCACTAGGCGCTAATTTAAAAAGAATCGAGGAAAGCACTGCTGCCTTAGCTGCTGCTGATGACTGGGTACTTACATATGCTCCAACTGCTACACGGCAACCTGGCAGGCCTTCAACTACATCCCTCGGTAATATGACAGCGTTCCAACATAAGCTTACTAGTAGTGCACATCGGTTCAATTTCATGGTCCAGGATTTCTTTGAGGATGTAGGACCATTGCTCAGTATGCAGTTGGGCGGTCAGACATTGGAGGGTTTGTTCCAAGTATTTAATTCATATGTGAACATGCTCATAAAAGCATTACCGGGTTCAATGGAGGAAGAAGCAAACTTTGAAGGTTCTGGGAATAAAATTGTCAGTGTAGCTGAGAATGAAGCCCAACAGATTGCTTTGCTGGCAAATGCATCCTTATTAGCAGATGAACTACTTCCACGCGCAGCCATGAAGCTGTCTCCACTGAATCAGGTTGCTTACAGGGATGATCTTCGTAGAAGATCATCAGATAGGCAAAACCGGCATCCTGAGCAAAGGGAGTGGAAGAGGCGGCTTGTCAGCTCAGTTGATAGATTAAAAGATAGTTTCTGTCGTCAGCATGCTCTAGATCTCATTTTTACAGAGGATGGTGATAGCCATCTTACTGCTGATATGTACATAAACATGGATGCGAATGTGGAAGAGGTTGATTGGTTCCCATCCTTAATATTCCAGGAACTTTTTGTAAAACTAAATAGAATGGCCAGTATAGCAGCAGAAATGTTTGTAGGCAGGGAAAGATTTGCTACATTGCTTCTAATGAGACTAACAGAAACTGTCATATTGTGGCTTTCGGAAGACCAGAGCTTTTGGGATGATATTGAGGATGGACCACCTTTAGGTCCTCTTGGCTTACAACAATTCTATCTGGATATGAAGTTTGTCATACTCTTTGCCTCTCAAGGTCGTTACCTATCTCGAAATTTGAATCGAGCTATTAACGAGATCATATCTAAAGCCATGGCAGCATTTTCTGCAACTGGCATGGATCCCAATAGTGTGCTCCCAGAAGATGAATGGTTCAATGAAGTCTGTCAAGACGCAATTGAAAGATTAAGTGGAAAACCAAAAGCTGTGAACGGTGATCGGGATCTTAATAGCCCAACCGCCTCTGTTTCGGCACAGTCAATCTCATCTGTTAGATCTCATGGGAGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0008104 GO:0008150 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022607 GO:0031503 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048278 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C Vps51

Protein Analysis

767

Amino Acids

84.52

Weight (kDa)

5.27

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS51_Exo84_N	PF08700	28 - 104	3.3e-13	Vps51/EXO84/COG1 N-terminal
Exo84_C	PF16528	145 - 354	1.2e-19	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49830 AT5G49830 AT5G49830
fragaria_vesca	FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400
malus_domestica	MD09G1158400.v1.1 MD17G1144400.v1.1
prunus_persica	Prupe.3G167600_v2.0.a1
pyrus_communis	pycom09g07700 pycom17g13750
rosa_chinensis	RchiOBHm_Chr2g0150201
rosa_laevigata	RLG00000020478
rosa_multiflora	Rmu_ssc0000020.1_g000009
rosa_roxburghii	Rroxscaffold_2G00097370
rosa_rugosa	Rorug02G0419700 Rorug02G0419800
rosa_samantha	Rh2BG491100 Rh2CG465200
rosa_wichuraiana	Rw2G039070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	22
Acc36I	ACCTGC	1 cut(s)	303
AccII	CGCG	4 cut(s)	35, 525, 655, 1542
AciI	CCGC	5 cut(s)	192, 476, 1344, 1651, 2247
AclWI	GGATC	5 cut(s)	410, 567, 2123, 2136, 2238
AcoI	YGGCCR	1 cut(s)	1842
AcsI	RAATTY	2 cut(s)	446, 2062
AcuI	CTGAAG	3 cut(s)	393, 555, 569
AcyI	GRCGYC	1 cut(s)	54
AfaI	GTAC	3 cut(s)	1074, 1176, 1757
AfiI	CCNNNNNNNGG	2 cut(s)	931, 1979
AflIII	ACRYGT	2 cut(s)	523, 653
AhlI	ACTAGT	1 cut(s)	1265
AjnI	CCWGG	4 cut(s)	426, 1207, 1296, 1812
AjuI	GAANNNNNNNTTGG	2 cut(s)	880, 912
AloI	GAACNNNNNNTCC	2 cut(s)	1349, 1381
Alw21I	GWGCWC	3 cut(s)	718, 1276, 2145
Alw26I	GTCTC	3 cut(s)	582, 1563, 1897
Alw44I	GTGCAC	2 cut(s)	714, 1272
AlwI	GGATC	5 cut(s)	410, 567, 2123, 2136, 2238
AlwNI	CAGNNNCTG	2 cut(s)	980, 1916
Ama87I	CYCGRG	1 cut(s)	62
AoxI	GGCC	7 cut(s)	18, 70, 706, 1027, 1091, 1214, 1842
ApaLI	GTGCAC	2 cut(s)	714, 1272
ApoI	RAATTY	2 cut(s)	446, 2062
ArsI	GACNNNNNNTTYG	2 cut(s)	760, 792
AscI	GGCGCGCC	1 cut(s)	33
Asp700I	GAANNNNTTC	1 cut(s)	1533
AspLEI	GCGC	4 cut(s)	35, 37, 1118, 1544
AspS9I	GGNCC	6 cut(s)	19, 707, 1294, 1319, 1970, 1982
AsuC2I	CCSGG	2 cut(s)	22, 1413
AsuHPI	GGTGA	4 cut(s)	530, 674, 1742, 2234
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	4 cut(s)	1294, 1319, 1970, 1982
BaeGI	GKGCMC	2 cut(s)	718, 1276
BalI	TGGCCA	1 cut(s)	1844
BamHI	GGATCC	1 cut(s)	2128
BauI	CACGAG	3 cut(s)	572, 711, 1050
BbsI	GAAGAC	3 cut(s)	20, 73, 1944
Bbv12I	GWGCWC	3 cut(s)	718, 1276, 2145
BbvCI	CCTCAGC	2 cut(s)	333, 630
BccI	CCATC	6 cut(s)	698, 787, 1721, 1746, 1807, 1961
BceAI	ACGGC	2 cut(s)	33, 1217
BcgI	CGANNNNNNTGC	4 cut(s)	755, 789, 920, 954
BciT130I	CCWGG	4 cut(s)	428, 1209, 1298, 1814
BcnI	CCSGG	2 cut(s)	22, 1413
BcoDI	GTCTC	3 cut(s)	582, 1563, 1897
BcuI	ACTAGT	1 cut(s)	1265
BfaI	CTAG	7 cut(s)	329, 381, 509, 1095, 1112, 1266, 1706
BfmI	CTRYAG	3 cut(s)	420, 581, 1002
BfoI	RGCGCY	1 cut(s)	1119
BfuAI	ACCTGC	1 cut(s)	303
BglII	AGATCT	2 cut(s)	1708, 2282
Bme1390I	CCNGG	6 cut(s)	22, 428, 1209, 1298, 1413, 1814
Bme18I	GGWCC	4 cut(s)	1294, 1319, 1970, 1982
BmeT110I	CYCGRG	1 cut(s)	62
BmgT120I	GGNCC	6 cut(s)	19, 707, 1294, 1319, 1970, 1982
BmiI	GGNNCC	3 cut(s)	885, 1796, 2130
BmrFI	CCNGG	6 cut(s)	22, 428, 1209, 1298, 1413, 1814
BmrI	ACTGGG	1 cut(s)	1180
BmsI	GCATC	6 cut(s)	116, 493, 977, 1520, 1633, 1759
BmuI	ACTGGG	1 cut(s)	1180
BpiI	GAAGAC	3 cut(s)	20, 73, 1944
BplI	GAGNNNNNCTC	2 cut(s)	266, 298
BpmI	CTGGAG	1 cut(s)	449
Bpu10I	CCTNAGC	4 cut(s)	333, 630, 1153, 1629
BpuEI	CTTGAG	3 cut(s)	291, 831, 2025
BpuMI	CCSGG	2 cut(s)	22, 1413
Bsa29I	ATCGAT	1 cut(s)	348
BsaBI	GATNNNNATC	3 cut(s)	414, 1737, 2229
BsaHI	GRCGYC	1 cut(s)	54
BsaJI	CCNNGG	4 cut(s)	195, 930, 1231, 2100
BsaXI	ACNNNNNCTCC	6 cut(s)	422, 452, 1171, 1201, 1349, 1379
Bsc4I	CCNNNNNNNGG	2 cut(s)	931, 1979
Bse118I	RCCGGY	2 cut(s)	37, 1620
Bse1I	ACTGG	5 cut(s)	118, 855, 1175, 1845, 2125
Bse3DI	GCAATG	2 cut(s)	1322, 1889
Bse8I	GATNNNNATC	3 cut(s)	414, 1737, 2229
BseBI	CCWGG	4 cut(s)	428, 1209, 1298, 1814
BseCI	ATCGAT	1 cut(s)	348
BseDI	CCNNGG	4 cut(s)	195, 930, 1231, 2100
BseJI	GATNNNNATC	3 cut(s)	414, 1737, 2229
BseLI	CCNNNNNNNGG	2 cut(s)	931, 1979
BseMI	GCAATG	2 cut(s)	1322, 1889
BseMII	CTCAG	7 cut(s)	324, 621, 696, 1342, 1464, 1620, 1677
BseNI	ACTGG	5 cut(s)	118, 855, 1175, 1845, 2125
BsePI	GCGCGC	1 cut(s)	33
BseRI	GAGGAG	1 cut(s)	813
BseSI	GKGCMC	2 cut(s)	718, 1276
BseYI	CCCAGC	1 cut(s)	983
BsgI	GTGCAG	2 cut(s)	693, 798
Bsh1236I	CGCG	4 cut(s)	35, 525, 655, 1542
Bsh1285I	CGRYCG	1 cut(s)	26
BshFI	GGCC	7 cut(s)	20, 72, 708, 1029, 1093, 1216, 1844
BshVI	ATCGAT	1 cut(s)	348
BsiEI	CGRYCG	1 cut(s)	26
BsiHKAI	GWGCWC	3 cut(s)	718, 1276, 2145
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	4 cut(s)	22, 38, 1412, 1621
BslI	CCNNNNNNNGG	2 cut(s)	931, 1979
BsmAI	GTCTC	3 cut(s)	582, 1563, 1897
BsmI	GAATGC	1 cut(s)	233
BsnI	GGCC	7 cut(s)	20, 72, 708, 1029, 1093, 1216, 1844
BsoBI	CYCGRG	1 cut(s)	62
Bsp1286I	GDGCHC	3 cut(s)	718, 1276, 2145
Bsp1407I	TGTACA	1 cut(s)	1755
Bsp19I	CCATGG	1 cut(s)	2100
BspACI	CCGC	5 cut(s)	192, 476, 1344, 1651, 2247
BspANI	GGCC	7 cut(s)	20, 72, 708, 1029, 1093, 1216, 1844
BspCNI	CTCAG	7 cut(s)	325, 622, 695, 1341, 1465, 1621, 1676
BspDI	ATCGAT	1 cut(s)	348
BspFNI	CGCG	4 cut(s)	35, 525, 655, 1542
BspLI	GGNNCC	3 cut(s)	885, 1796, 2130
BspMAI	CTGCAG	2 cut(s)	585, 1006
BspMI	ACCTGC	1 cut(s)	303
BspPI	GGATC	5 cut(s)	410, 567, 2123, 2136, 2238
BsrDI	GCAATG	2 cut(s)	1322, 1889
BsrFI	RCCGGY	2 cut(s)	37, 1620
BsrGI	TGTACA	1 cut(s)	1755
BsrI	ACTGG	5 cut(s)	118, 855, 1175, 1845, 2125
BssAI	RCCGGY	2 cut(s)	37, 1620
BssECI	CCNNGG	4 cut(s)	195, 930, 1231, 2100
BssHII	GCGCGC	1 cut(s)	33
BssNI	GRCGYC	1 cut(s)	54
BssSI	CACGAG	3 cut(s)	572, 711, 1050
BssT1I	CCWWGG	1 cut(s)	2100
Bst2BI	CACGAG	3 cut(s)	572, 711, 1050
Bst2UI	CCWGG	4 cut(s)	428, 1209, 1298, 1814
Bst4CI	ACNGT	5 cut(s)	722, 825, 1918, 2222, 2265
Bst6I	CTCTTC	3 cut(s)	176, 1640, 1776
BstACI	GRCGYC	1 cut(s)	54
BstAPI	GCANNNNNTGC	1 cut(s)	2114
BstAUI	TGTACA	1 cut(s)	1755
BstC8I	GCNNGC	8 cut(s)	35, 605, 627, 640, 644, 1214, 1503, 1701
BstDEI	CTNAG	8 cut(s)	333, 630, 682, 1153, 1328, 1473, 1629, 1663
BstDSI	CCRYGG	1 cut(s)	2100
BstFNI	CGCG	4 cut(s)	35, 525, 655, 1542
BstH2I	RGCGCY	1 cut(s)	1119
BstHHI	GCGC	4 cut(s)	35, 37, 1118, 1544
BstMAI	GTCTC	3 cut(s)	582, 1563, 1897
BstMCI	CGRYCG	1 cut(s)	26
BstNI	CCWGG	4 cut(s)	428, 1209, 1298, 1814
BstNSI	RCATGY	3 cut(s)	962, 1396, 1703
BstSCI	CCNGG	6 cut(s)	20, 426, 1207, 1296, 1411, 1812
BstSFI	CTRYAG	3 cut(s)	420, 581, 1002
BstSLI	GKGCMC	2 cut(s)	718, 1276
BstUI	CGCG	4 cut(s)	35, 525, 655, 1542
BstV2I	GAAGAC	3 cut(s)	20, 73, 1944
BstX2I	RGATCY	5 cut(s)	415, 1708, 2128, 2230, 2282
BstYI	RGATCY	5 cut(s)	415, 1708, 2128, 2230, 2282
Bsu15I	ATCGAT	1 cut(s)	348
BsuRI	GGCC	7 cut(s)	20, 72, 708, 1029, 1093, 1216, 1844
BsuTUI	ATCGAT	1 cut(s)	348
BtgI	CCRYGG	1 cut(s)	2100
BtsI	GCAGTG	1 cut(s)	1143
BtsIMutI	CAGTG	5 cut(s)	686, 862, 1143, 1471, 1562
BveI	ACCTGC	1 cut(s)	303
Cac8I	GCNNGC	8 cut(s)	35, 605, 627, 640, 644, 1214, 1503, 1701
CaiI	CAGNNNCTG	2 cut(s)	980, 1916
CfoI	GCGC	4 cut(s)	35, 37, 1118, 1544
Cfr10I	RCCGGY	2 cut(s)	37, 1620
Cfr13I	GGNCC	6 cut(s)	19, 707, 1294, 1319, 1970, 1982
ClaI	ATCGAT	1 cut(s)	348
CseI	GACGC	2 cut(s)	43, 2189
Csp6I	GTAC	3 cut(s)	1073, 1175, 1756
CspCI	CAANNNNNGTGG	2 cut(s)	1622, 1657
CviQI	GTAC	3 cut(s)	1073, 1175, 1756
DdeI	CTNAG	8 cut(s)	333, 630, 682, 1153, 1328, 1473, 1629, 1663
DraI	TTTAAA	1 cut(s)	1125
DrdI	GACNNNNNNGTC	1 cut(s)	22
DseDI	GACNNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	1 cut(s)	1842
Eam1104I	CTCTTC	3 cut(s)	176, 1640, 1776
EarI	CTCTTC	3 cut(s)	176, 1640, 1776
EciI	GGCGGA	1 cut(s)	181
Eco130I	CCWWGG	1 cut(s)	2100
Eco147I	AGGCCT	3 cut(s)	72, 1093, 1216
Eco32I	GATATC	2 cut(s)	258, 752
Eco47I	GGWCC	4 cut(s)	1294, 1319, 1970, 1982
Eco57I	CTGAAG	3 cut(s)	393, 555, 569
Eco88I	CYCGRG	1 cut(s)	62
EcoO109I	RGGNCCY	1 cut(s)	1982
EcoRII	CCWGG	4 cut(s)	426, 1207, 1296, 1812
EcoRV	GATATC	2 cut(s)	258, 752
EcoT14I	CCWWGG	1 cut(s)	2100
EcoT22I	ATGCAT	2 cut(s)	964, 1513
ErhI	CCWWGG	1 cut(s)	2100
FauNDI	CATATG	3 cut(s)	793, 1183, 1384
FspBI	CTAG	7 cut(s)	329, 381, 509, 1095, 1112, 1266, 1706
GlaI	GCGC	4 cut(s)	34, 36, 1117, 1543
GsaI	CCCAGC	1 cut(s)	987
GsuI	CTGGAG	1 cut(s)	449
HaeII	RGCGCY	1 cut(s)	1119
HaeIII	GGCC	7 cut(s)	20, 72, 708, 1029, 1093, 1216, 1844
HapII	CCGG	4 cut(s)	22, 38, 1412, 1621
HgaI	GACGC	2 cut(s)	43, 2189
HhaI	GCGC	4 cut(s)	35, 37, 1118, 1544
Hin1I	GRCGYC	1 cut(s)	54
Hin6I	GCGC	4 cut(s)	33, 35, 1116, 1542
HinP1I	GCGC	4 cut(s)	33, 35, 1116, 1542
HindIII	AAGCTT	3 cut(s)	495, 564, 1259
HinfI	GANTC	7 cut(s)	101, 319, 350, 860, 1131, 1567, 2068
HpaII	CCGG	4 cut(s)	22, 38, 1412, 1621
HphI	GGTGA	4 cut(s)	530, 674, 1742, 2234
Hpy166II	GTNNAC	7 cut(s)	343, 521, 665, 716, 1274, 1390, 2218
Hpy188I	TCNGA	7 cut(s)	91, 262, 290, 901, 1350, 1609, 1936
Hpy8I	GTNNAC	7 cut(s)	343, 521, 665, 716, 1274, 1390, 2218
HpyAV	CCTTC	8 cut(s)	62, 136, 368, 509, 657, 782, 1227, 1436
HpyCH4III	ACNGT	5 cut(s)	722, 825, 1918, 2222, 2265
HpyCH4IV	ACGT	1 cut(s)	114
HpyF3I	CTNAG	8 cut(s)	333, 630, 682, 1153, 1328, 1473, 1629, 1663
HpySE526I	ACGT	1 cut(s)	114
Hsp92I	GRCGYC	1 cut(s)	54
HspAI	GCGC	4 cut(s)	33, 35, 1116, 1542
LmnI	GCTCC	4 cut(s)	134, 800, 1192, 2148
LweI	GCATC	6 cut(s)	116, 493, 977, 1520, 1633, 1759
MaeI	CTAG	7 cut(s)	329, 381, 509, 1095, 1112, 1266, 1706
MaeII	ACGT	1 cut(s)	114
MaeIII	GTNAC	2 cut(s)	120, 2048
MfeI	CAATTG	1 cut(s)	2184
MflI	RGATCY	5 cut(s)	415, 1708, 2128, 2230, 2282
MhlI	GDGCHC	3 cut(s)	718, 1276, 2145
MlsI	TGGCCA	1 cut(s)	1844
MluI	ACGCGT	2 cut(s)	523, 653
MluNI	TGGCCA	1 cut(s)	1844
MmeI	TCCRAC	4 cut(s)	537, 1023, 1214, 1276
Mox20I	TGGCCA	1 cut(s)	1844
Mph1103I	ATGCAT	2 cut(s)	964, 1513
MroXI	GAANNNNTTC	1 cut(s)	1533
MscI	TGGCCA	1 cut(s)	1844
MslI	CAYNNNNRTG	1 cut(s)	1763
Msp20I	TGGCCA	1 cut(s)	1844
MspA1I	CMGCKG	1 cut(s)	977
MspI	CCGG	4 cut(s)	22, 38, 1412, 1621
MspR9I	CCNGG	6 cut(s)	22, 428, 1209, 1298, 1413, 1814
MunI	CAATTG	1 cut(s)	2184
Mva1269I	GAATGC	1 cut(s)	233
MvaI	CCWGG	4 cut(s)	428, 1209, 1298, 1814
MvnI	CGCG	4 cut(s)	35, 525, 655, 1542
NciI	CCSGG	2 cut(s)	22, 1413
NcoI	CCATGG	1 cut(s)	2100
NdeI	CATATG	3 cut(s)	793, 1183, 1384
NlaIV	GGNNCC	3 cut(s)	885, 1796, 2130
NmeAIII	GCCGAG	1 cut(s)	220
NmuCI	GTSAC	1 cut(s)	120
NsiI	ATGCAT	2 cut(s)	964, 1513
NspI	RCATGY	3 cut(s)	962, 1396, 1703
PaeI	GCATGC	1 cut(s)	1703
PaeR7I	CTCGAG	1 cut(s)	62
PalAI	GGCGCGCC	1 cut(s)	33
PauI	GCGCGC	1 cut(s)	33
PceI	AGGCCT	3 cut(s)	72, 1093, 1216
PcsI	WCGNNNNNNNCGW	1 cut(s)	23
PctI	GAATGC	1 cut(s)	233
PdmI	GAANNNNTTC	1 cut(s)	1533
PfeI	GAWTC	7 cut(s)	101, 319, 350, 860, 1131, 1567, 2068
PfoI	TCCNGGA	2 cut(s)	1296, 1812
PpuMI	RGGWCCY	1 cut(s)	1982
Psp5II	RGGWCCY	1 cut(s)	1982
Psp6I	CCWGG	4 cut(s)	426, 1207, 1296, 1812
PspFI	CCCAGC	1 cut(s)	983
PspGI	CCWGG	4 cut(s)	426, 1207, 1296, 1812
PspN4I	GGNNCC	3 cut(s)	885, 1796, 2130
PspPI	GGNCC	6 cut(s)	19, 707, 1294, 1319, 1970, 1982
PspPPI	RGGWCCY	1 cut(s)	1982
PspXI	VCTCGAGB	1 cut(s)	62
PstI	CTGCAG	2 cut(s)	585, 1006
PstNI	CAGNNNCTG	2 cut(s)	980, 1916
PsuI	RGATCY	5 cut(s)	415, 1708, 2128, 2230, 2282
PteI	GCGCGC	1 cut(s)	33
PvuII	CAGCTG	1 cut(s)	977
RsaI	GTAC	3 cut(s)	1074, 1176, 1757
RsaNI	GTAC	3 cut(s)	1073, 1175, 1756
RseI	CAYNNNNRTG	1 cut(s)	1763
Sau96I	GGNCC	6 cut(s)	19, 707, 1294, 1319, 1970, 1982
ScrFI	CCNGG	6 cut(s)	22, 428, 1209, 1298, 1413, 1814
SduI	GDGCHC	3 cut(s)	718, 1276, 2145
SfaNI	GCATC	6 cut(s)	116, 493, 977, 1520, 1633, 1759
SfcI	CTRYAG	3 cut(s)	420, 581, 1002
Sfr274I	CTCGAG	1 cut(s)	62
SgsI	GGCGCGCC	1 cut(s)	33
SinI	GGWCC	4 cut(s)	1294, 1319, 1970, 1982
SlaI	CTCGAG	1 cut(s)	62
SmiMI	CAYNNNNRTG	1 cut(s)	1763
SmlI	CTYRAG	4 cut(s)	62, 306, 846, 2040
SmoI	CTYRAG	4 cut(s)	62, 306, 846, 2040
SpeI	ACTAGT	1 cut(s)	1265
SphI	GCATGC	1 cut(s)	1703
SseBI	AGGCCT	3 cut(s)	72, 1093, 1216
SsiI	CCGC	5 cut(s)	192, 476, 1344, 1651, 2247
SspI	AATATT	1 cut(s)	1809
SspMI	CTAG	7 cut(s)	329, 381, 509, 1095, 1112, 1266, 1706
StuI	AGGCCT	3 cut(s)	72, 1093, 1216
StyD4I	CCNGG	6 cut(s)	20, 426, 1207, 1296, 1411, 1812
StyI	CCWWGG	1 cut(s)	2100
TaaI	ACNGT	5 cut(s)	722, 825, 1918, 2222, 2265
TaiI	ACGT	1 cut(s)	117
TaqI	TCGA	7 cut(s)	26, 63, 99, 348, 1134, 2059, 2071
TatI	WGTACW	2 cut(s)	1072, 1755
TauI	GCSGC	1 cut(s)	1654
TfiI	GAWTC	7 cut(s)	101, 319, 350, 860, 1131, 1567, 2068
TscAI	CASTG	5 cut(s)	693, 862, 1150, 1471, 1569
TseFI	GTSAC	1 cut(s)	120
Tsp45I	GTSAC	1 cut(s)	120
TspRI	CASTG	5 cut(s)	693, 862, 1150, 1471, 1569
VneI	GTGCAC	2 cut(s)	714, 1272
VpaK11BI	GGWCC	4 cut(s)	1294, 1319, 1970, 1982
XapI	RAATTY	2 cut(s)	446, 2062
XbaI	TCTAGA	1 cut(s)	1705
XceI	RCATGY	3 cut(s)	962, 1396, 1703
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2154
XhoI	CTCGAG	1 cut(s)	62
XmnI	GAANNNNTTC	1 cut(s)	1533
XspI	CTAG	7 cut(s)	329, 381, 509, 1095, 1112, 1266, 1706
Zsp2I	ATGCAT	2 cut(s)	964, 1513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.