Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009323

Physical Location & Seq

Genomic Coordinates Forward (+)

67925103 .. 67931149

Gene Structure 6047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51955

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGGCGTTAACGGCGAAGACGGCTCGGTCGAGAGGCACGCCGGTGAAGGAGAACGGCGTCAAGCTCGAGGAAGGGCTTAATGTGTTCAAGTCTGATAGGTTCGATGCTCAGGGCTACGTCCAGTCGCGCTGCTCCCTCAACGAGAAGGAGTTGAGACAGTTCTGCTCAAATCTCTTTGATTTAAAGAAGGCAGCTGCGGAGGAAATGCGTAGAAGTGTCTATGCTAATTATTCGGCATTCATACAAACTTCAAAAGAGATATCAGATTTGGAGGGGCAGCTTTCCTCTATCAGAAATCTGCTATCTACTCTTGCTACTGTAAATCATGATCTAGCTGAGGGGGTAAAGATTGATTTATCTAAATCAGTGGAAGGGTCTACTGAAAATGGTTCATTAACTTTTGAAGATAGAGAGCCTTCAGACTTGGAGAATTGGTTGGCAGAATTTCCTGATCTCTTGGATGTTTTGTTAGCTGAGAGGAGAGTCGATGAAGCTTTAGCTGCCCTGGAGGAAGGTGAACATGTGGCTTCTGAAGCAAAACAACTAAAGATGTTGGATCCAGCTCTACTCTTGTCTCTACAGAATGCTATTACTGAACGCAGGCAAAAGTTAGCTGATCAGCTTGCTGAGGCTGCTTGCCAGCCTTCGACTCGTGGTGGTGAACTCCGTTCATCTATATCTGCACTTAAGAAACTTGGGGATGGCCCTCGTGCACACAGTCTTCTTCTGAATGCACATTACCAGAGATATCAGTATAATATGCAAAGCCTTCGTCCATCAAGCACTTCATATGGAGGAGCGTATACTGCTGCTCTCTCACAGTTAGTGTTCTCTGCTATTGCTCAAGCTGCCACTGATTCTGCTGCTATATTTGAGAATGAACCAGATTATACTTCTGAGCTTGTTATGTGGGCCATAAAGCAAACCGAGGCTTTCGCTCTTCTCATTAAAAGACATGCGTTAGCTTCATCAGCAGCTGCTGGAGGCTTAAGAGCTGCTGCAGAGTGTGTTCAAATTGCATTAGGTCACTGTTCCTTGTTAGAAGCTCGTGGCTTGGCCCTTTGTCCTGTGCTTTTGAAACTTTTTAGGCCTAGTGTTGAGCAAGCATTAGAGGCTAACTTAAAACGAATTGAAGAAAGTACTGCTGCCTTAGCTGCTGCTGATGACTGGGTACTTACGACTGCTCCAACAGCGACACGTCAACCTGGCAGGCCTTCAAGTACATCCCTTGGTAATACAACAGCATTTCAACATAAACTTACAAGTAGTGCCCATCGGTTCAATTTGATGGTCCAGGATTTCTTTGAGGATGTTGGACCGTTGTTGAGTATGCAGTTGGGAGGTCAAACACTAGAAGGTTTGTTCCAAGTGTTTAACTCATACGTGAACATGCTCATAAAAGCATTACCAGGTTCAATGGATGAAGAAGCAAACTATGAAGGATCTGGGAATAAAATTGTGCGCATGGCTGGGAATGAAGCCCAACAGATGGCATTGCTGGCAAATGCATCATTATTAGCAGATGAACTACTTCCACGTGCAGCCATGAAGTTGGCTCCAATAATTAAGGTTGCATTCAAGGACGATCTTCGTAGAAGATCATCAGATAGGCAAAATCGCCATCCTGAGCAAAGAGAATGGAAGAAACGGCTTGTCAGCTCGGTTGATAGACTAAAAGATAGTTTTTGTCGTCAGCATGCTCTAGATCTCATTTTTACAGAGGAGGGTGATAGTCATCTTACTGCTGATATGTACATAAACCTGGATGGGAATGTGGATGAATTTGAGTGGTTTCCATCCTTAATATTCCAGGAACTTTTTGTAAAACTAAACAGGATGACCAGTATAGCGGCAGATATGTTTGTTGGCAGAGAGAGATTTACTACATTGCTATTTATGAGACTAACAGAAACTGTCATCTTGTGGCTTTCCGAAGATCAAAGCTTTTGGGATGATATTGAGGATGGGCCAAGGCCTTTGGGTCCTCTTGGCTTACAACAGTTCTATCTAGACATGAAGTTCGTCATATGCTTTGCTTCACAAGGTCGTTTCCTATCCCGAAATTTGCAACGCGTTATCAATGAGATCATATCTAAAGCAATGACAGCATTTTCTGCAACAGGCATGGATCCCTATAGTGAGCTCCCGGAAGATGAGTGGTTTGATGACATCTGCCATGAAGCAATGGAAAGATTGAGTGGAAAACCAAAGGCCATCAATGGAGATCGAGACCTTAACAGCCCAACGGCCTCGGTTTCAGCACAATCAATCTCATCAGTTAGATCTCATGGGAGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0008104 GO:0008150 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022607 GO:0031503 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048278 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C Vps51

Protein Analysis

766

Amino Acids

84.87

Weight (kDa)

5.24

Isoelectric Point (pI)

42.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS51_Exo84_N	PF08700	29 - 106	1e-13	Vps51/EXO84/COG1 N-terminal
Exo84_C	PF16528	145 - 353	3.6e-20	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49830 AT5G49830 AT5G49830
fragaria_vesca	FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400
malus_domestica	MD09G1158400.v1.1 MD17G1144400.v1.1
prunus_persica	Prupe.3G167600_v2.0.a1
pyrus_communis	pycom09g07700 pycom17g13750
rosa_chinensis	RchiOBHm_Chr2g0150201
rosa_laevigata	RLG00000020478
rosa_multiflora	Rmu_ssc0000020.1_g000009
rosa_roxburghii	Rroxscaffold_2G00097370
rosa_rugosa	Rorug02G0419700 Rorug02G0419800
rosa_samantha	Rh2BG491100 Rh2CG465200
rosa_wichuraiana	Rw2G039070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	25
Acc16I	TGCGCA	1 cut(s)	1463
AccB7I	CCANNNNNTGG	1 cut(s)	1489
AccI	GTMKAC	2 cut(s)	377, 803
AccII	CGCG	2 cut(s)	127, 2073
AciI	CCGC	2 cut(s)	197, 1850
AclWI	GGATC	5 cut(s)	551, 564, 1450, 2123, 2136
AcsI	RAATTY	3 cut(s)	443, 1781, 2062
AcuI	CTGAAG	2 cut(s)	402, 552
AcvI	CACGTG	1 cut(s)	1538
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	4 cut(s)	1141, 1173, 1222, 1754
AfiI	CCNNNNNNNGG	1 cut(s)	1489
AflII	CTTAAG	2 cut(s)	686, 988
AflIII	ACRYGT	3 cut(s)	520, 1196, 2071
AjiI	CACGTC	1 cut(s)	1199
AjnI	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
AleI	CACNNNNGTG	1 cut(s)	41
Alw21I	GWGCWC	2 cut(s)	715, 2145
Alw26I	GTCTC	4 cut(s)	148, 579, 1894, 2223
Alw44I	GTGCAC	1 cut(s)	711
AlwI	GGATC	5 cut(s)	551, 564, 1450, 2123, 2136
AlwNI	CAGNNNCTG	3 cut(s)	977, 980, 1913
Ama87I	CYCGRG	1 cut(s)	65
AoxI	GGCC	9 cut(s)	703, 912, 1056, 1088, 1211, 1967, 1973, 2211, 2247
ApaLI	GTGCAC	1 cut(s)	711
ApoI	RAATTY	3 cut(s)	443, 1781, 2062
ArsI	GACNNNNNNTTYG	4 cut(s)	757, 789, 2003, 2035
Asp700I	GAANNNNTTC	1 cut(s)	1530
AspLEI	GCGC	2 cut(s)	129, 1464
AspS9I	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
AsuC2I	CCSGG	1 cut(s)	2147
AsuHPI	GGTGA	4 cut(s)	55, 527, 671, 1739
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	3 cut(s)	1291, 1316, 1982
BaeGI	GKGCMC	2 cut(s)	715, 1273
BamHI	GGATCC	2 cut(s)	556, 2128
BanII	GRGCYC	1 cut(s)	2145
BauI	CACGAG	3 cut(s)	651, 708, 1047
BbrPI	CACGTG	1 cut(s)	1538
BbsI	GAAGAC	2 cut(s)	23, 713
Bbv12I	GWGCWC	2 cut(s)	715, 2145
BbvCI	CCTCAGC	2 cut(s)	336, 627
BceAI	ACGGC	5 cut(s)	27, 36, 70, 1664, 2262
BcgI	CGANNNNNNTGC	2 cut(s)	752, 786
BciT130I	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BclI	TGATCA	1 cut(s)	616
BcnI	CCSGG	1 cut(s)	2147
BcoDI	GTCTC	4 cut(s)	148, 579, 1894, 2223
BfaI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
BfmI	CTRYAG	3 cut(s)	578, 999, 2134
BfrI	CTTAAG	2 cut(s)	686, 988
BglII	AGATCT	2 cut(s)	1705, 2282
BmcAI	AGTACT	1 cut(s)	1141
Bme1390I	CCNGG	7 cut(s)	506, 1206, 1295, 1410, 1763, 1811, 2147
Bme18I	GGWCC	3 cut(s)	1291, 1316, 1982
BmeT110I	CYCGRG	1 cut(s)	65
BmgBI	CACGTC	1 cut(s)	1199
BmgT120I	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
BmiI	GGNNCC	4 cut(s)	558, 1557, 1983, 2130
BmrFI	CCNGG	7 cut(s)	506, 1206, 1295, 1410, 1763, 1811, 2147
BmrI	ACTGGG	1 cut(s)	1177
BmsI	GCATC	2 cut(s)	94, 1517
BmuI	ACTGGG	1 cut(s)	1177
BpiI	GAAGAC	2 cut(s)	23, 713
BpmI	CTGGAG	2 cut(s)	527, 1002
Bpu10I	CCTNAGC	5 cut(s)	108, 336, 627, 1150, 1626
BpuEI	CTTGAG	1 cut(s)	828
BpuMI	CCSGG	1 cut(s)	2147
BsaAI	YACGTR	2 cut(s)	1384, 1538
BsaBI	GATNNNNATC	1 cut(s)	1734
BsaHI	GRCGYC	1 cut(s)	57
BsaI	GGTCTC	1 cut(s)	2223
BsaJI	CCNNGG	5 cut(s)	504, 927, 1228, 1970, 2250
BsaXI	ACNNNNNCTCC	4 cut(s)	419, 449, 1168, 1198
Bsc4I	CCNNNNNNNGG	1 cut(s)	1489
Bse118I	RCCGGY	1 cut(s)	40
Bse1I	ACTGG	3 cut(s)	121, 1172, 1842
Bse3DI	GCAATG	4 cut(s)	1493, 1886, 2106, 2190
Bse8I	GATNNNNATC	1 cut(s)	1734
BseBI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BseDI	CCNNGG	5 cut(s)	504, 927, 1228, 1970, 2250
BseJI	GATNNNNATC	1 cut(s)	1734
BseLI	CCNNNNNNNGG	1 cut(s)	1489
BseMI	GCAATG	4 cut(s)	1493, 1886, 2106, 2190
BseMII	CTCAG	6 cut(s)	122, 327, 465, 618, 888, 1617
BseNI	ACTGG	3 cut(s)	121, 1172, 1842
BseRI	GAGGAG	3 cut(s)	493, 810, 1736
BseSI	GKGCMC	2 cut(s)	715, 1273
BseYI	CCCAGC	1 cut(s)	1469
BsgI	GTGCAG	2 cut(s)	666, 1560
Bsh1236I	CGCG	2 cut(s)	127, 2073
Bsh1285I	CGRYCG	1 cut(s)	29
BshFI	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
BsiEI	CGRYCG	1 cut(s)	29
BsiHKAI	GWGCWC	2 cut(s)	715, 2145
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	2 cut(s)	41, 2147
BslI	CCNNNNNNNGG	1 cut(s)	1489
BsmAI	GTCTC	4 cut(s)	148, 579, 1894, 2223
BsmI	GAATGC	4 cut(s)	236, 589, 736, 1574
BsnI	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
Bso31I	GGTCTC	1 cut(s)	2223
BsoBI	CYCGRG	1 cut(s)	65
Bsp1286I	GDGCHC	3 cut(s)	715, 1273, 2145
Bsp1407I	TGTACA	1 cut(s)	1752
BspACI	CCGC	2 cut(s)	197, 1850
BspANI	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
BspCNI	CTCAG	6 cut(s)	121, 328, 466, 619, 889, 1618
BspFNI	CGCG	2 cut(s)	127, 2073
BspHI	TCATGA	1 cut(s)	325
BspLI	GGNNCC	4 cut(s)	558, 1557, 1983, 2130
BspMAI	CTGCAG	1 cut(s)	1003
BspPI	GGATC	5 cut(s)	551, 564, 1450, 2123, 2136
BspQI	GCTCTTC	1 cut(s)	945
BspTI	CTTAAG	2 cut(s)	686, 988
BspTNI	GGTCTC	1 cut(s)	2223
BsrDI	GCAATG	4 cut(s)	1493, 1886, 2106, 2190
BsrFI	RCCGGY	1 cut(s)	40
BsrGI	TGTACA	1 cut(s)	1752
BsrI	ACTGG	3 cut(s)	121, 1172, 1842
BssAI	RCCGGY	1 cut(s)	40
BssECI	CCNNGG	5 cut(s)	504, 927, 1228, 1970, 2250
BssNAI	GTATAC	1 cut(s)	804
BssNI	GRCGYC	1 cut(s)	57
BssSI	CACGAG	3 cut(s)	651, 708, 1047
BssT1I	CCWWGG	2 cut(s)	1228, 1970
Bst1107I	GTATAC	1 cut(s)	804
Bst2BI	CACGAG	3 cut(s)	651, 708, 1047
Bst2UI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
Bst4CI	ACNGT	8 cut(s)	159, 319, 719, 822, 1031, 1320, 1915, 2001
Bst6I	CTCTTC	1 cut(s)	945
BstACI	GRCGYC	1 cut(s)	57
BstAFI	CTTAAG	2 cut(s)	686, 988
BstAPI	GCANNNNNTGC	1 cut(s)	2114
BstAUI	TGTACA	1 cut(s)	1752
BstBAI	YACGTR	2 cut(s)	1384, 1538
BstC8I	GCNNGC	9 cut(s)	38, 602, 624, 637, 641, 1104, 1211, 1500, 1698
BstDEI	CTNAG	7 cut(s)	108, 336, 474, 627, 897, 1150, 1626
BstFNI	CGCG	2 cut(s)	127, 2073
BstHHI	GCGC	2 cut(s)	129, 1464
BstMAI	GTCTC	4 cut(s)	148, 579, 1894, 2223
BstMCI	CGRYCG	1 cut(s)	29
BstNI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BstNSI	RCATGY	4 cut(s)	524, 959, 1393, 1700
BstSCI	CCNGG	7 cut(s)	504, 1204, 1293, 1408, 1761, 1809, 2145
BstSFI	CTRYAG	3 cut(s)	578, 999, 2134
BstSLI	GKGCMC	2 cut(s)	715, 1273
BstUI	CGCG	2 cut(s)	127, 2073
BstV2I	GAAGAC	2 cut(s)	23, 713
BstX2I	RGATCY	5 cut(s)	556, 1442, 1705, 2128, 2282
BstXI	CCANNNNNNTGG	1 cut(s)	1552
BstYI	RGATCY	5 cut(s)	556, 1442, 1705, 2128, 2282
BstZ17I	GTATAC	1 cut(s)	804
BsuRI	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
BtrI	CACGTC	1 cut(s)	1199
BtsIMutI	CAGTG	3 cut(s)	372, 852, 1027
Cac8I	GCNNGC	9 cut(s)	38, 602, 624, 637, 641, 1104, 1211, 1500, 1698
CaiI	CAGNNNCTG	3 cut(s)	977, 980, 1913
CciI	TCATGA	1 cut(s)	325
CfoI	GCGC	2 cut(s)	129, 1464
Cfr10I	RCCGGY	1 cut(s)	40
Cfr13I	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
CseI	GACGC	1 cut(s)	46
CsiI	ACCWGGT	1 cut(s)	1408
Csp6I	GTAC	4 cut(s)	1140, 1172, 1221, 1753
CviQI	GTAC	4 cut(s)	1140, 1172, 1221, 1753
DdeI	CTNAG	7 cut(s)	108, 336, 474, 627, 897, 1150, 1626
DraI	TTTAAA	1 cut(s)	183
DrdI	GACNNNNNNGTC	1 cut(s)	25
DseDI	GACNNNNNNGTC	1 cut(s)	25
Eam1104I	CTCTTC	1 cut(s)	945
EarI	CTCTTC	1 cut(s)	945
Ecl136II	GAGCTC	1 cut(s)	2143
Eco130I	CCWWGG	2 cut(s)	1228, 1970
Eco147I	AGGCCT	3 cut(s)	1090, 1213, 1975
Eco24I	GRGCYC	1 cut(s)	2145
Eco31I	GGTCTC	1 cut(s)	2223
Eco32I	GATATC	2 cut(s)	261, 749
Eco47I	GGWCC	3 cut(s)	1291, 1316, 1982
Eco53kI	GAGCTC	1 cut(s)	2143
Eco57I	CTGAAG	2 cut(s)	402, 552
Eco72I	CACGTG	1 cut(s)	1538
Eco88I	CYCGRG	1 cut(s)	65
EcoICRI	GAGCTC	1 cut(s)	2143
EcoO109I	RGGNCCY	1 cut(s)	1982
EcoRII	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
EcoRV	GATATC	2 cut(s)	261, 749
EcoT14I	CCWWGG	2 cut(s)	1228, 1970
EcoT22I	ATGCAT	1 cut(s)	1510
EcoT38I	GRGCYC	1 cut(s)	2145
ErhI	CCWWGG	2 cut(s)	1228, 1970
FauNDI	CATATG	2 cut(s)	790, 2027
FbaI	TGATCA	1 cut(s)	616
FblI	GTMKAC	2 cut(s)	377, 803
FriOI	GRGCYC	1 cut(s)	2145
FspAI	RTGCGCAY	1 cut(s)	1463
FspBI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
FspI	TGCGCA	1 cut(s)	1463
GlaI	GCGC	2 cut(s)	128, 1463
GsaI	CCCAGC	1 cut(s)	1473
GsuI	CTGGAG	2 cut(s)	527, 1002
HaeIII	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
HapII	CCGG	2 cut(s)	41, 2147
HgaI	GACGC	1 cut(s)	46
HhaI	GCGC	2 cut(s)	129, 1464
Hin1I	GRCGYC	1 cut(s)	57
Hin6I	GCGC	2 cut(s)	127, 1462
HinP1I	GCGC	2 cut(s)	127, 1462
HincII	GTYRAC	2 cut(s)	9, 1202
HindII	GTYRAC	2 cut(s)	9, 1202
HindIII	AAGCTT	2 cut(s)	492, 1942
HinfI	GANTC	3 cut(s)	483, 649, 857
HpaI	GTTAAC	1 cut(s)	9
HpaII	CCGG	2 cut(s)	41, 2147
HphI	GGTGA	4 cut(s)	55, 527, 671, 1739
Hpy166II	GTNNAC	8 cut(s)	9, 378, 518, 662, 713, 804, 1202, 1387
Hpy188I	TCNGA	9 cut(s)	94, 265, 293, 421, 532, 729, 898, 1606, 1933
Hpy188III	TCNNGA	9 cut(s)	30, 326, 449, 1625, 1703, 2009, 2058, 2228, 2298
Hpy8I	GTNNAC	8 cut(s)	9, 378, 518, 662, 713, 804, 1202, 1387
HpyCH4III	ACNGT	8 cut(s)	159, 319, 719, 822, 1031, 1320, 1915, 2001
HpyCH4IV	ACGT	4 cut(s)	117, 1198, 1383, 1537
HpyF3I	CTNAG	7 cut(s)	108, 336, 474, 627, 897, 1150, 1626
HpySE526I	ACGT	4 cut(s)	117, 1198, 1383, 1537
Hsp92I	GRCGYC	1 cut(s)	57
HspAI	GCGC	2 cut(s)	127, 1462
Ksp22I	TGATCA	1 cut(s)	616
KspAI	GTTAAC	1 cut(s)	9
LguI	GCTCTTC	1 cut(s)	945
LmnI	GCTCC	5 cut(s)	137, 797, 1189, 1561, 2148
LweI	GCATC	2 cut(s)	94, 1517
MabI	ACCWGGT	1 cut(s)	1408
MaeI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
MaeII	ACGT	4 cut(s)	117, 1198, 1383, 1537
MaeIII	GTNAC	1 cut(s)	1025
MflI	RGATCY	5 cut(s)	556, 1442, 1705, 2128, 2282
MhlI	GDGCHC	3 cut(s)	715, 1273, 2145
MluI	ACGCGT	1 cut(s)	2071
MlyI	GAGTC	2 cut(s)	492, 643
MmeI	TCCRAC	3 cut(s)	534, 1211, 1294
Mph1103I	ATGCAT	1 cut(s)	1510
MroXI	GAANNNNTTC	1 cut(s)	1530
MslI	CAYNNNNRTG	1 cut(s)	41
MspA1I	CMGCKG	2 cut(s)	194, 977
MspCI	CTTAAG	2 cut(s)	686, 988
MspI	CCGG	2 cut(s)	41, 2147
MspR9I	CCNGG	7 cut(s)	506, 1206, 1295, 1410, 1763, 1811, 2147
Mva1269I	GAATGC	4 cut(s)	236, 589, 736, 1574
MvaI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
MvnI	CGCG	2 cut(s)	127, 2073
NciI	CCSGG	1 cut(s)	2147
NdeI	CATATG	2 cut(s)	790, 2027
NlaIV	GGNNCC	4 cut(s)	558, 1557, 1983, 2130
NmuCI	GTSAC	1 cut(s)	1025
NsbI	TGCGCA	1 cut(s)	1463
NsiI	ATGCAT	1 cut(s)	1510
NspI	RCATGY	4 cut(s)	524, 959, 1393, 1700
OliI	CACNNNNGTG	1 cut(s)	41
PaeI	GCATGC	1 cut(s)	1700
PaeR7I	CTCGAG	1 cut(s)	65
PagI	TCATGA	1 cut(s)	325
PceI	AGGCCT	3 cut(s)	1090, 1213, 1975
PciI	ACATGT	1 cut(s)	520
PciSI	GCTCTTC	1 cut(s)	945
PcsI	WCGNNNNNNNCGW	1 cut(s)	26
PctI	GAATGC	4 cut(s)	236, 589, 736, 1574
PdmI	GAANNNNTTC	1 cut(s)	1530
PfeI	GAWTC	1 cut(s)	857
PflMI	CCANNNNNTGG	1 cut(s)	1489
PfoI	TCCNGGA	3 cut(s)	1293, 1809, 2145
PleI	GAGTC	2 cut(s)	491, 643
PmaCI	CACGTG	1 cut(s)	1538
PmlI	CACGTG	1 cut(s)	1538
PpsI	GAGTC	2 cut(s)	491, 643
Ppu21I	YACGTR	2 cut(s)	1384, 1538
PpuMI	RGGWCCY	1 cut(s)	1982
PscI	ACATGT	1 cut(s)	520
Psp124BI	GAGCTC	1 cut(s)	2145
Psp5II	RGGWCCY	1 cut(s)	1982
Psp6I	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
PspCI	CACGTG	1 cut(s)	1538
PspFI	CCCAGC	1 cut(s)	1469
PspGI	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
PspN4I	GGNNCC	4 cut(s)	558, 1557, 1983, 2130
PspPI	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
PspPPI	RGGWCCY	1 cut(s)	1982
PspXI	VCTCGAGB	1 cut(s)	65
PstI	CTGCAG	1 cut(s)	1003
PstNI	CAGNNNCTG	3 cut(s)	977, 980, 1913
PsuI	RGATCY	5 cut(s)	556, 1442, 1705, 2128, 2282
PvuII	CAGCTG	2 cut(s)	194, 977
RsaI	GTAC	4 cut(s)	1141, 1173, 1222, 1754
RsaNI	GTAC	4 cut(s)	1140, 1172, 1221, 1753
RseI	CAYNNNNRTG	1 cut(s)	41
SacI	GAGCTC	1 cut(s)	2145
SapI	GCTCTTC	1 cut(s)	945
Sau96I	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
ScaI	AGTACT	1 cut(s)	1141
SchI	GAGTC	2 cut(s)	492, 643
ScrFI	CCNGG	7 cut(s)	506, 1206, 1295, 1410, 1763, 1811, 2147
SduI	GDGCHC	3 cut(s)	715, 1273, 2145
SexAI	ACCWGGT	1 cut(s)	1408
SfaNI	GCATC	2 cut(s)	94, 1517
SfcI	CTRYAG	3 cut(s)	578, 999, 2134
Sfr274I	CTCGAG	1 cut(s)	65
SgrAI	CRCCGGYG	1 cut(s)	40
SinI	GGWCC	3 cut(s)	1291, 1316, 1982
SlaI	CTCGAG	1 cut(s)	65
SmiMI	CAYNNNNRTG	1 cut(s)	41
SmlI	CTYRAG	4 cut(s)	65, 686, 843, 988
SmoI	CTYRAG	4 cut(s)	65, 686, 843, 988
SphI	GCATGC	1 cut(s)	1700
SseBI	AGGCCT	3 cut(s)	1090, 1213, 1975
SsiI	CCGC	2 cut(s)	197, 1850
SspI	AATATT	1 cut(s)	1806
SspMI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
SstI	GAGCTC	1 cut(s)	2145
StuI	AGGCCT	3 cut(s)	1090, 1213, 1975
StyD4I	CCNGG	7 cut(s)	504, 1204, 1293, 1408, 1761, 1809, 2145
StyI	CCWWGG	2 cut(s)	1228, 1970
TaaI	ACNGT	8 cut(s)	159, 319, 719, 822, 1031, 1320, 1915, 2001
TaiI	ACGT	4 cut(s)	120, 1201, 1386, 1540
TaqI	TCGA	6 cut(s)	29, 66, 102, 486, 647, 2227
TaqII	GACCGA	1 cut(s)	15
TatI	WGTACW	3 cut(s)	1139, 1220, 1752
TauI	GCSGC	1 cut(s)	1853
TfiI	GAWTC	1 cut(s)	857
TscAI	CASTG	3 cut(s)	372, 859, 1034
TseFI	GTSAC	1 cut(s)	1025
Tsp45I	GTSAC	1 cut(s)	1025
TspGWI	ACGGA	1 cut(s)	656
TspRI	CASTG	3 cut(s)	372, 859, 1034
Van91I	CCANNNNNTGG	1 cut(s)	1489
Vha464I	CTTAAG	2 cut(s)	686, 988
VneI	GTGCAC	1 cut(s)	711
VpaK11BI	GGWCC	3 cut(s)	1291, 1316, 1982
XapI	RAATTY	3 cut(s)	443, 1781, 2062
XbaI	TCTAGA	2 cut(s)	1702, 2008
XceI	RCATGY	4 cut(s)	524, 959, 1393, 1700
XhoI	CTCGAG	1 cut(s)	65
XmiI	GTMKAC	2 cut(s)	377, 803
XmnI	GAANNNNTTC	1 cut(s)	1530
XspI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
ZrmI	AGTACT	1 cut(s)	1141
Zsp2I	ATGCAT	1 cut(s)	1510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.