Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0009323

Physical Location & Seq

Genomic Coordinates Forward (+)

62811732 .. 62817281

Gene Structure 5550 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG465200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGGCGTTAACGGCGAAGACGGCTCGGTCGAGGGGCACGCCGGTGAAGGAGAACGGCGTCAAGCTCGAGGAAGGGCTTAATGTGTTCAAGTCTGATAGGTTCGATGCTCAGGGCTACGTCCAGTCGCGCTGCTCCCTCAACGAGAAGGAGTTGAGACAGTTCTGCTCAAATCTCTTTGATTTAAAGAAGGCAGCTGCGGAGGAAATGCGTAGAAGTGTCTATGCTAATTATTCGGCATTCATACAAACTTCAAAAGAGATATCAGATTTGGAGGGGCAGCTTTCCTCTATCAGAAATCTGCTATCTACTCTTGCTACTGTAAATCATGATCTAGCTGAGGGGGTAAAGATTGATTTATCTAAATCAGTGGAAGGGTCTACTGAAAATGGTTCATTAACTTTTGAAGATAGAGAGCCTTCAGACTTGGAGAATTGGTTGGCAGAATTTCCTGATCTCTTGGATGTTTTGTTAGCTGAGAGGAGAGTGGATGAAGCTTTAGCTGCCCTGGAGGAAGGTGAACATGTGGCTTCTGAAGCAAAACAACTAAAGATGTTGGATCCAGCTCTACTCTTGTCTCTACAGAATGCTATTACTGAACGCAGGCAAAAGTTAGCTGATCAGCTTGCTGAGGCTGCTTGCCAGCCTTCGACTCGTGGTGGTGAACTCCGTTCATCTATATCTGCACTTAAGAAACTTGGGGATGGCCCTCGTGCACACAGTCTTCTTCTGAATGCACATTACCAGAGATATCAGTATAATATGCAAAGCCTTCGTCCATCAAGCACTTCATATGGAGGAGCATATACTGCTGCTCTCTCACAGTTAGTGTTCTCTGCTATTGCTCAAGCTGCCACTGACTCTGCTGCTATATTTGATAATGAACCAGATTATACTTCTGAGCTTGTTATGTGGGCCATAAAGCAAACCGAGGCTTTCGCTCTTCTCATTAAAAGACATGCGTTAGCTTCATCAGCAGCTGCTGGAGGCTTAAGAGCTGCTGCAGAGTGTGTTCAAATTGCATTAGGTCACTGTTCCTTGTTAGAAGCTCGTGGCTTGGCCCTTTGTCCTGTGCTTTTGAAACTTTTTAGGCCTAGTGTTGAGCAAGCATTAGAGGCTAACTTAAAACGAATTGAAGAAAGTACTGCTGCCTTAGCTGCTGCTGATGACTGGGTACTTACGACTGCTCCAACAGCAACACGTCAACCTGGCAGGCCTTCAAGTACATCCCTTGGTAATACAACAGCATTTCAACATAAACTTACAAGTAGTGCCCATCGGTTCAATTTGATGGTCCAGGATTTCTTTGAGGATGTTGGACCGTTGTTGAGTATGCAGTTGGGAGGTCAAACACTAGAAGGTTTGTTCCAAGTGTTTAACTCATACGTGAACATGCTCATAAAAGCATTACCAGGTTCAATGGATGAAGAAGCAAACTATGAAGGATCTGGGAATAAAATTGTTCGCATGGCTGGGAATGAAGCCCAACAGATGGCATTGCTGGCAAATGCATCATTATTAGCAGATGAACTACTTCCACGTGCAGCCATGAAGTTGGCTCCAATAATTAAGGTTGCATTCAAGGACGATCTTCGTAGAAGATCATCAGATAGGCAAAATCGCCATCCTGAGCAAAGAGAATGGAAGAAACGGCTTGTCAGCTCGGTTGATAGACTAAAAGATAGTTTTTGTCGTCAGCATGCTCTAGATCTCATTTTTACAGAGGAGGGTGATAGTCATCTTACTGCTGATATGTACATAAACCTGGATGGGAATGTGGATGAATTTGAGTGGTTTCCATCCTTAATATTCCAGGAACTTTTTGTAAAACTAAACAGGATGACCAGTATAGCCGCAGATATGTTTGTTGGCAGAGAGAGATTTACTACATTGCTATTTATGAGACTAACAGAAACTGTCATCTTGTGGCTTTCCGAAGATCAAAGCTTTTGGGATGATATTGAGGATGGGCCAAGGCCTTTGGGTCCTCTTGGCTTACAACAGTTCTATCTAGACATGAAGTTCGTCATATGCTTTGCTTCACAAGGTCGTTTCCTATCCCGAAATTTGCAACGCGTTATCAATGAGATCATATCTAAAGCAATGACAGCATTTTCTGCAACAGGCATGGATCCCTATAGTGAGCTCCCGGAAGATGAGTGGTTTGATGACATCTGCCATGAAGCAATGGAAAGATTGAGTGGAAAACCAAAGGCCATCAATGGAGATCGGGACCTTAACAGCCCAACGGCCTCGGTTTCAGCACAATCAATCTCATCAGTTAGATCTCATGGGAGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0008104 GO:0008150 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022607 GO:0031503 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048278 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C Vps51

Protein Analysis

766

Amino Acids

84.86

Weight (kDa)

5.23

Isoelectric Point (pI)

42.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS51_Exo84_N	PF08700	29 - 106	1e-13	Vps51/EXO84/COG1 N-terminal
Exo84_C	PF16528	145 - 353	6e-20	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49830 AT5G49830 AT5G49830
fragaria_vesca	FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400
malus_domestica	MD09G1158400.v1.1 MD17G1144400.v1.1
prunus_persica	Prupe.3G167600_v2.0.a1
pyrus_communis	pycom09g07700 pycom17g13750
rosa_chinensis	RchiOBHm_Chr2g0150201
rosa_laevigata	RLG00000020478
rosa_multiflora	Rmu_ssc0000020.1_g000009
rosa_roxburghii	Rroxscaffold_2G00097370
rosa_rugosa	Rorug02G0419700 Rorug02G0419800
rosa_samantha	Rh2BG491100 Rh2CG465200
rosa_wichuraiana	Rw2G039070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	25
AccB7I	CCANNNNNTGG	1 cut(s)	1489
AccI	GTMKAC	1 cut(s)	377
AccII	CGCG	2 cut(s)	127, 2073
AciI	CCGC	2 cut(s)	197, 1851
AclWI	GGATC	5 cut(s)	551, 564, 1450, 2123, 2136
AcsI	RAATTY	3 cut(s)	443, 1781, 2062
AcuI	CTGAAG	2 cut(s)	402, 552
AcvI	CACGTG	1 cut(s)	1538
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	4 cut(s)	1141, 1173, 1222, 1754
AfiI	CCNNNNNNNGG	1 cut(s)	1489
AflII	CTTAAG	2 cut(s)	686, 988
AflIII	ACRYGT	3 cut(s)	520, 1196, 2071
AjiI	CACGTC	1 cut(s)	1199
AjnI	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
AleI	CACNNNNGTG	1 cut(s)	41
Alw21I	GWGCWC	2 cut(s)	715, 2145
Alw26I	GTCTC	3 cut(s)	148, 579, 1894
Alw44I	GTGCAC	1 cut(s)	711
AlwI	GGATC	5 cut(s)	551, 564, 1450, 2123, 2136
AlwNI	CAGNNNCTG	3 cut(s)	977, 980, 1913
Ama87I	CYCGRG	1 cut(s)	65
AoxI	GGCC	9 cut(s)	703, 912, 1056, 1088, 1211, 1967, 1973, 2211, 2247
ApaLI	GTGCAC	1 cut(s)	711
ApoI	RAATTY	3 cut(s)	443, 1781, 2062
ArsI	GACNNNNNNTTYG	4 cut(s)	757, 789, 2003, 2035
Asp700I	GAANNNNTTC	1 cut(s)	1530
AspLEI	GCGC	1 cut(s)	129
AspS9I	GGNCC	8 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982, 2230
AsuC2I	CCSGG	1 cut(s)	2147
AsuHPI	GGTGA	4 cut(s)	55, 527, 671, 1739
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	4 cut(s)	1291, 1316, 1982, 2230
BaeGI	GKGCMC	3 cut(s)	38, 715, 1273
BamHI	GGATCC	2 cut(s)	556, 2128
BanII	GRGCYC	1 cut(s)	2145
BauI	CACGAG	3 cut(s)	651, 708, 1047
BbrPI	CACGTG	1 cut(s)	1538
BbsI	GAAGAC	2 cut(s)	23, 713
Bbv12I	GWGCWC	2 cut(s)	715, 2145
BbvCI	CCTCAGC	2 cut(s)	336, 627
BceAI	ACGGC	5 cut(s)	27, 36, 70, 1664, 2262
BcgI	CGANNNNNNTGC	2 cut(s)	752, 786
BciT130I	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BclI	TGATCA	1 cut(s)	616
BcnI	CCSGG	1 cut(s)	2147
BcoDI	GTCTC	3 cut(s)	148, 579, 1894
BfaI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
BfmI	CTRYAG	3 cut(s)	578, 999, 2134
BfrI	CTTAAG	2 cut(s)	686, 988
BglII	AGATCT	2 cut(s)	1705, 2282
BmcAI	AGTACT	1 cut(s)	1141
Bme1390I	CCNGG	7 cut(s)	506, 1206, 1295, 1410, 1763, 1811, 2147
Bme18I	GGWCC	4 cut(s)	1291, 1316, 1982, 2230
BmeT110I	CYCGRG	1 cut(s)	65
BmgBI	CACGTC	1 cut(s)	1199
BmgT120I	GGNCC	8 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982, 2230
BmiI	GGNNCC	5 cut(s)	558, 1557, 1983, 2130, 2231
BmrFI	CCNGG	7 cut(s)	506, 1206, 1295, 1410, 1763, 1811, 2147
BmrI	ACTGGG	1 cut(s)	1177
BmsI	GCATC	2 cut(s)	94, 1517
BmuI	ACTGGG	1 cut(s)	1177
BpiI	GAAGAC	2 cut(s)	23, 713
BpmI	CTGGAG	2 cut(s)	527, 1002
Bpu10I	CCTNAGC	5 cut(s)	108, 336, 627, 1150, 1626
BpuEI	CTTGAG	1 cut(s)	828
BpuMI	CCSGG	1 cut(s)	2147
BsaAI	YACGTR	2 cut(s)	1384, 1538
BsaBI	GATNNNNATC	1 cut(s)	1734
BsaHI	GRCGYC	1 cut(s)	57
BsaJI	CCNNGG	5 cut(s)	504, 927, 1228, 1970, 2250
BsaXI	ACNNNNNCTCC	4 cut(s)	419, 449, 1168, 1198
Bsc4I	CCNNNNNNNGG	1 cut(s)	1489
Bse118I	RCCGGY	1 cut(s)	40
Bse1I	ACTGG	3 cut(s)	121, 1172, 1842
Bse3DI	GCAATG	4 cut(s)	1493, 1886, 2106, 2190
Bse8I	GATNNNNATC	1 cut(s)	1734
BseBI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BseDI	CCNNGG	5 cut(s)	504, 927, 1228, 1970, 2250
BseJI	GATNNNNATC	1 cut(s)	1734
BseLI	CCNNNNNNNGG	1 cut(s)	1489
BseMI	GCAATG	4 cut(s)	1493, 1886, 2106, 2190
BseMII	CTCAG	6 cut(s)	122, 327, 465, 618, 888, 1617
BseNI	ACTGG	3 cut(s)	121, 1172, 1842
BseRI	GAGGAG	3 cut(s)	493, 810, 1736
BseSI	GKGCMC	3 cut(s)	38, 715, 1273
BseYI	CCCAGC	1 cut(s)	1469
BsgI	GTGCAG	2 cut(s)	666, 1560
Bsh1236I	CGCG	2 cut(s)	127, 2073
Bsh1285I	CGRYCG	1 cut(s)	29
BshFI	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
BsiEI	CGRYCG	1 cut(s)	29
BsiHKAI	GWGCWC	2 cut(s)	715, 2145
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	2 cut(s)	41, 2147
BslFI	GGGAC	1 cut(s)	2243
BslI	CCNNNNNNNGG	1 cut(s)	1489
BsmAI	GTCTC	3 cut(s)	148, 579, 1894
BsmFI	GGGAC	1 cut(s)	2243
BsmI	GAATGC	4 cut(s)	236, 589, 736, 1574
BsnI	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
BsoBI	CYCGRG	1 cut(s)	65
Bsp1286I	GDGCHC	4 cut(s)	38, 715, 1273, 2145
Bsp1407I	TGTACA	1 cut(s)	1752
BspACI	CCGC	2 cut(s)	197, 1851
BspANI	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
BspCNI	CTCAG	6 cut(s)	121, 328, 466, 619, 889, 1618
BspFNI	CGCG	2 cut(s)	127, 2073
BspHI	TCATGA	1 cut(s)	325
BspLI	GGNNCC	5 cut(s)	558, 1557, 1983, 2130, 2231
BspMAI	CTGCAG	1 cut(s)	1003
BspPI	GGATC	5 cut(s)	551, 564, 1450, 2123, 2136
BspQI	GCTCTTC	1 cut(s)	945
BspTI	CTTAAG	2 cut(s)	686, 988
BsrDI	GCAATG	4 cut(s)	1493, 1886, 2106, 2190
BsrFI	RCCGGY	1 cut(s)	40
BsrGI	TGTACA	1 cut(s)	1752
BsrI	ACTGG	3 cut(s)	121, 1172, 1842
BssAI	RCCGGY	1 cut(s)	40
BssECI	CCNNGG	5 cut(s)	504, 927, 1228, 1970, 2250
BssNI	GRCGYC	1 cut(s)	57
BssSI	CACGAG	3 cut(s)	651, 708, 1047
BssT1I	CCWWGG	2 cut(s)	1228, 1970
Bst2BI	CACGAG	3 cut(s)	651, 708, 1047
Bst2UI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
Bst4CI	ACNGT	8 cut(s)	159, 319, 719, 822, 1031, 1320, 1915, 2001
Bst6I	CTCTTC	1 cut(s)	945
BstACI	GRCGYC	1 cut(s)	57
BstAFI	CTTAAG	2 cut(s)	686, 988
BstAPI	GCANNNNNTGC	2 cut(s)	806, 2114
BstAUI	TGTACA	1 cut(s)	1752
BstBAI	YACGTR	2 cut(s)	1384, 1538
BstC8I	GCNNGC	9 cut(s)	38, 602, 624, 637, 641, 1104, 1211, 1500, 1698
BstDEI	CTNAG	7 cut(s)	108, 336, 474, 627, 897, 1150, 1626
BstFNI	CGCG	2 cut(s)	127, 2073
BstHHI	GCGC	1 cut(s)	129
BstMAI	GTCTC	3 cut(s)	148, 579, 1894
BstMCI	CGRYCG	1 cut(s)	29
BstNI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BstNSI	RCATGY	4 cut(s)	524, 959, 1393, 1700
BstSCI	CCNGG	7 cut(s)	504, 1204, 1293, 1408, 1761, 1809, 2145
BstSFI	CTRYAG	3 cut(s)	578, 999, 2134
BstSLI	GKGCMC	3 cut(s)	38, 715, 1273
BstUI	CGCG	2 cut(s)	127, 2073
BstV2I	GAAGAC	2 cut(s)	23, 713
BstX2I	RGATCY	5 cut(s)	556, 1442, 1705, 2128, 2282
BstXI	CCANNNNNNTGG	1 cut(s)	1552
BstYI	RGATCY	5 cut(s)	556, 1442, 1705, 2128, 2282
BsuRI	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
BtrI	CACGTC	1 cut(s)	1199
BtsIMutI	CAGTG	3 cut(s)	372, 852, 1027
Cac8I	GCNNGC	9 cut(s)	38, 602, 624, 637, 641, 1104, 1211, 1500, 1698
CaiI	CAGNNNCTG	3 cut(s)	977, 980, 1913
CciI	TCATGA	1 cut(s)	325
CfoI	GCGC	1 cut(s)	129
Cfr10I	RCCGGY	1 cut(s)	40
Cfr13I	GGNCC	8 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982, 2230
CseI	GACGC	1 cut(s)	46
CsiI	ACCWGGT	1 cut(s)	1408
Csp6I	GTAC	4 cut(s)	1140, 1172, 1221, 1753
CviQI	GTAC	4 cut(s)	1140, 1172, 1221, 1753
DdeI	CTNAG	7 cut(s)	108, 336, 474, 627, 897, 1150, 1626
DraI	TTTAAA	1 cut(s)	183
DrdI	GACNNNNNNGTC	1 cut(s)	25
DseDI	GACNNNNNNGTC	1 cut(s)	25
Eam1104I	CTCTTC	1 cut(s)	945
EarI	CTCTTC	1 cut(s)	945
Ecl136II	GAGCTC	1 cut(s)	2143
Eco130I	CCWWGG	2 cut(s)	1228, 1970
Eco147I	AGGCCT	3 cut(s)	1090, 1213, 1975
Eco24I	GRGCYC	1 cut(s)	2145
Eco32I	GATATC	2 cut(s)	261, 749
Eco47I	GGWCC	4 cut(s)	1291, 1316, 1982, 2230
Eco53kI	GAGCTC	1 cut(s)	2143
Eco57I	CTGAAG	2 cut(s)	402, 552
Eco72I	CACGTG	1 cut(s)	1538
Eco88I	CYCGRG	1 cut(s)	65
EcoICRI	GAGCTC	1 cut(s)	2143
EcoO109I	RGGNCCY	2 cut(s)	1982, 2230
EcoRII	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
EcoRV	GATATC	2 cut(s)	261, 749
EcoT14I	CCWWGG	2 cut(s)	1228, 1970
EcoT22I	ATGCAT	1 cut(s)	1510
EcoT38I	GRGCYC	1 cut(s)	2145
ErhI	CCWWGG	2 cut(s)	1228, 1970
FaqI	GGGAC	1 cut(s)	2243
FauNDI	CATATG	2 cut(s)	790, 2027
FbaI	TGATCA	1 cut(s)	616
FblI	GTMKAC	1 cut(s)	377
FriOI	GRGCYC	1 cut(s)	2145
FspBI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
GlaI	GCGC	1 cut(s)	128
GsaI	CCCAGC	1 cut(s)	1473
GsuI	CTGGAG	2 cut(s)	527, 1002
HaeIII	GGCC	9 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975, 2213, 2249
HapII	CCGG	2 cut(s)	41, 2147
HgaI	GACGC	1 cut(s)	46
HhaI	GCGC	1 cut(s)	129
Hin1I	GRCGYC	1 cut(s)	57
Hin6I	GCGC	1 cut(s)	127
HinP1I	GCGC	1 cut(s)	127
HincII	GTYRAC	2 cut(s)	9, 1202
HindII	GTYRAC	2 cut(s)	9, 1202
HindIII	AAGCTT	2 cut(s)	492, 1942
HinfI	GANTC	2 cut(s)	649, 857
HpaI	GTTAAC	1 cut(s)	9
HpaII	CCGG	2 cut(s)	41, 2147
HphI	GGTGA	4 cut(s)	55, 527, 671, 1739
Hpy166II	GTNNAC	7 cut(s)	9, 378, 518, 662, 713, 1202, 1387
Hpy188I	TCNGA	9 cut(s)	94, 265, 293, 421, 532, 729, 898, 1606, 1933
Hpy188III	TCNNGA	8 cut(s)	326, 449, 1625, 1703, 2009, 2058, 2228, 2298
Hpy8I	GTNNAC	7 cut(s)	9, 378, 518, 662, 713, 1202, 1387
HpyCH4III	ACNGT	8 cut(s)	159, 319, 719, 822, 1031, 1320, 1915, 2001
HpyCH4IV	ACGT	4 cut(s)	117, 1198, 1383, 1537
HpyF3I	CTNAG	7 cut(s)	108, 336, 474, 627, 897, 1150, 1626
HpySE526I	ACGT	4 cut(s)	117, 1198, 1383, 1537
Hsp92I	GRCGYC	1 cut(s)	57
HspAI	GCGC	1 cut(s)	127
Ksp22I	TGATCA	1 cut(s)	616
KspAI	GTTAAC	1 cut(s)	9
LguI	GCTCTTC	1 cut(s)	945
LmnI	GCTCC	5 cut(s)	137, 797, 1189, 1561, 2148
LweI	GCATC	2 cut(s)	94, 1517
MabI	ACCWGGT	1 cut(s)	1408
MaeI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
MaeII	ACGT	4 cut(s)	117, 1198, 1383, 1537
MaeIII	GTNAC	1 cut(s)	1025
MflI	RGATCY	5 cut(s)	556, 1442, 1705, 2128, 2282
MhlI	GDGCHC	4 cut(s)	38, 715, 1273, 2145
MluI	ACGCGT	1 cut(s)	2071
MlyI	GAGTC	2 cut(s)	643, 851
MmeI	TCCRAC	3 cut(s)	534, 1211, 1294
Mph1103I	ATGCAT	1 cut(s)	1510
MroXI	GAANNNNTTC	1 cut(s)	1530
MslI	CAYNNNNRTG	1 cut(s)	41
MspA1I	CMGCKG	2 cut(s)	194, 977
MspCI	CTTAAG	2 cut(s)	686, 988
MspI	CCGG	2 cut(s)	41, 2147
MspR9I	CCNGG	7 cut(s)	506, 1206, 1295, 1410, 1763, 1811, 2147
Mva1269I	GAATGC	4 cut(s)	236, 589, 736, 1574
MvaI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
MvnI	CGCG	2 cut(s)	127, 2073
NciI	CCSGG	1 cut(s)	2147
NdeI	CATATG	2 cut(s)	790, 2027
NlaIV	GGNNCC	5 cut(s)	558, 1557, 1983, 2130, 2231
NmuCI	GTSAC	1 cut(s)	1025
NsiI	ATGCAT	1 cut(s)	1510
NspI	RCATGY	4 cut(s)	524, 959, 1393, 1700
OliI	CACNNNNGTG	1 cut(s)	41
PaeI	GCATGC	1 cut(s)	1700
PaeR7I	CTCGAG	1 cut(s)	65
PagI	TCATGA	1 cut(s)	325
PceI	AGGCCT	3 cut(s)	1090, 1213, 1975
PciI	ACATGT	1 cut(s)	520
PciSI	GCTCTTC	1 cut(s)	945
PcsI	WCGNNNNNNNCGW	1 cut(s)	26
PctI	GAATGC	4 cut(s)	236, 589, 736, 1574
PdmI	GAANNNNTTC	1 cut(s)	1530
PflMI	CCANNNNNTGG	1 cut(s)	1489
PfoI	TCCNGGA	3 cut(s)	1293, 1809, 2145
PleI	GAGTC	2 cut(s)	643, 851
PmaCI	CACGTG	1 cut(s)	1538
PmlI	CACGTG	1 cut(s)	1538
PpsI	GAGTC	2 cut(s)	643, 851
Ppu21I	YACGTR	2 cut(s)	1384, 1538
PpuMI	RGGWCCY	2 cut(s)	1982, 2230
PscI	ACATGT	1 cut(s)	520
Psp124BI	GAGCTC	1 cut(s)	2145
Psp5II	RGGWCCY	2 cut(s)	1982, 2230
Psp6I	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
PspCI	CACGTG	1 cut(s)	1538
PspFI	CCCAGC	1 cut(s)	1469
PspGI	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
PspN4I	GGNNCC	5 cut(s)	558, 1557, 1983, 2130, 2231
PspPI	GGNCC	8 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982, 2230
PspPPI	RGGWCCY	2 cut(s)	1982, 2230
PspXI	VCTCGAGB	1 cut(s)	65
PstI	CTGCAG	1 cut(s)	1003
PstNI	CAGNNNCTG	3 cut(s)	977, 980, 1913
PsuI	RGATCY	5 cut(s)	556, 1442, 1705, 2128, 2282
PvuII	CAGCTG	2 cut(s)	194, 977
RsaI	GTAC	4 cut(s)	1141, 1173, 1222, 1754
RsaNI	GTAC	4 cut(s)	1140, 1172, 1221, 1753
RseI	CAYNNNNRTG	1 cut(s)	41
SacI	GAGCTC	1 cut(s)	2145
SapI	GCTCTTC	1 cut(s)	945
Sau96I	GGNCC	8 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982, 2230
ScaI	AGTACT	1 cut(s)	1141
SchI	GAGTC	2 cut(s)	643, 851
ScrFI	CCNGG	7 cut(s)	506, 1206, 1295, 1410, 1763, 1811, 2147
SduI	GDGCHC	4 cut(s)	38, 715, 1273, 2145
SexAI	ACCWGGT	1 cut(s)	1408
SfaNI	GCATC	2 cut(s)	94, 1517
SfcI	CTRYAG	3 cut(s)	578, 999, 2134
Sfr274I	CTCGAG	1 cut(s)	65
SgrAI	CRCCGGYG	1 cut(s)	40
SinI	GGWCC	4 cut(s)	1291, 1316, 1982, 2230
SlaI	CTCGAG	1 cut(s)	65
SmiMI	CAYNNNNRTG	1 cut(s)	41
SmlI	CTYRAG	4 cut(s)	65, 686, 843, 988
SmoI	CTYRAG	4 cut(s)	65, 686, 843, 988
SphI	GCATGC	1 cut(s)	1700
SseBI	AGGCCT	3 cut(s)	1090, 1213, 1975
SsiI	CCGC	2 cut(s)	197, 1851
SspI	AATATT	1 cut(s)	1806
SspMI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
SstI	GAGCTC	1 cut(s)	2145
StuI	AGGCCT	3 cut(s)	1090, 1213, 1975
StyD4I	CCNGG	7 cut(s)	504, 1204, 1293, 1408, 1761, 1809, 2145
StyI	CCWWGG	2 cut(s)	1228, 1970
TaaI	ACNGT	8 cut(s)	159, 319, 719, 822, 1031, 1320, 1915, 2001
TaiI	ACGT	4 cut(s)	120, 1201, 1386, 1540
TaqI	TCGA	4 cut(s)	29, 66, 102, 647
TaqII	GACCGA	1 cut(s)	15
TatI	WGTACW	3 cut(s)	1139, 1220, 1752
TauI	GCSGC	1 cut(s)	1853
TscAI	CASTG	3 cut(s)	372, 859, 1034
TseFI	GTSAC	1 cut(s)	1025
Tsp45I	GTSAC	1 cut(s)	1025
TspGWI	ACGGA	1 cut(s)	656
TspRI	CASTG	3 cut(s)	372, 859, 1034
Van91I	CCANNNNNTGG	1 cut(s)	1489
Vha464I	CTTAAG	2 cut(s)	686, 988
VneI	GTGCAC	1 cut(s)	711
VpaK11BI	GGWCC	4 cut(s)	1291, 1316, 1982, 2230
XapI	RAATTY	3 cut(s)	443, 1781, 2062
XbaI	TCTAGA	2 cut(s)	1702, 2008
XceI	RCATGY	4 cut(s)	524, 959, 1393, 1700
XhoI	CTCGAG	1 cut(s)	65
XmiI	GTMKAC	1 cut(s)	377
XmnI	GAANNNNTTC	1 cut(s)	1530
XspI	CTAG	5 cut(s)	332, 1092, 1352, 1703, 2009
ZrmI	AGTACT	1 cut(s)	1141
Zsp2I	ATGCAT	1 cut(s)	1510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.