Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000020.1

Orthogroup ID

OG0009323

Physical Location & Seq

Genomic Coordinates Reverse (-)

27150 .. 36777

Gene Structure 9628 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000020.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

atgaggggcattattggtgggactcttgccctccttgtgcttcggctgcctttgttcacaatctgcaaggtttaccgaatttccgtattcgctaattttgtggtgcttgatagacttcctgaaaaggcgatggcgttaacggcgaagacggctcggtcgagaggcacgccggtgaaggagaacggcgtcaagctcgaggaagggcttaatgtgttcaagtctgataggttcgatgctcagggctacgttcagtcgcgctgctccctcaacgagaaggagttgagacagttctgctcaaatctctttgatttaaagaaggcagctgcggaggaaatgcgtagaagtgtctatgctaattattcggcattcatacaaacttcaaaagagatatcagatttggaggggcagctttcctctatcagaaatctgctatctactcttgctactgtaaatcatgatctagctgagggcgtaaagattgatttatctaaatcagtggaagggtctactgaaaatggctcattaacttttgaagatagagagccttcagacttggagaattggttggcagaatttcctgatctcttggatgttttgttagctgagaggagagtcgatgaagctttagctgccctggaggaaggtgaacatgtggcttctgaagcaaaacaactaaagatgttggatccagctctactcttgtctctacagaatgctattactgaacgcaggcaaaagttagctgatcagcttgctgaggctgcttgccagccttcgactcgtggtggtgaactccgttcatctatatctgcacttaagaaacttggggatggccctcgtgcacacagtcttcttctgaatgcacattaccagagatatcagtataatatgcaaagccttcgtccatcaagcacttcatatggaggagcatatactgctgctctctcacagttagtgttctctgctattgctcaagctgccactgattctgctgctatatttgagaatgaaccagattatacttctgagcttgttatgtgggccataaagcaaaccgaggctttcgctcttctcattaaaagacatgcgttagcttcatcagcagctgctggaggcttaagagctgctgcagagtgtgttcaaattgcattaggtcactgttccttgttagaagctcgtggcttggccctttgtcctgtgcttttgaaactttttaggcctagtgttgagcaagcattagaggctaacttaaaacgaattgaagaaagtactgctgccttagctgctgctgatgactgggtacttacgactgctccaacagcgacacgtcaacctggcaggccttcaagtacatcccttggtaatacaacagcatttcaacataaacttacaagtagtgcccatcggttcaatttgatggtccaggatttctttgaggatgttggaccgttgttgagtatgcagttgggaggtcaaacactagaaggtttgttccaagtgtttaactcatacgtgaacatgctcataaaagcattaccaggttcaatggatgaagaagcaaactatgaaggatctgggaataaaattgtgcgcatggctgggaatgaagcccaacagatggcattgctggcaaatgcatcattattagcagatgaactacttccacgtgcagccatgaagttggctccaataattaaggttgcattcaaggacgatcttcgtagaagatcgtcagataggcaaaatcgccatcctgagcaaagagaatggaagaaacggcttgtcagctcggttgatagactaaaagatagtttttgtcgtcagcatgctctagatctcatttttacagaggagggtgatagtcatcttactgctgatatgtacataaacctggatgggaatgtggatgaatttgagtggtttccatccttaatattccaggaactttttgtaaaactaaacaggatgaccagtatagcggcagatatgtttgttggcagagagagatttactacattgctatttatgagactaacagaaactgtcatcttgtggctttccgaagatcaaagcttttgggatgatattgaggatgggccaaggcctttgggtcctcttggcttacaacagttctatctagacatgaagttcgtcatatgctttgcttcacaaggtcgtttcctatcccgaaatttgcaacgcgttatcaatgagatcatatctaaagcaatgacagcattttctgcaacaggcatggatccctatagtgagctcccggaagatgagtggtttgatgacatctgccatgaagcaatggaaagattgagtggaaaaccaaaggccatcaatggagatcgagaccttaacagcccaacggcctcggtttcagcacaatcaatctcatcagttagatctcatgggagttcctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0008104 GO:0008150 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022607 GO:0031503 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048278 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C Vps51

Protein Analysis

809

Amino Acids

89.67

Weight (kDa)

5.41

Isoelectric Point (pI)

40.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49830 AT5G49830 AT5G49830
fragaria_vesca	FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400
malus_domestica	MD09G1158400.v1.1 MD17G1144400.v1.1
prunus_persica	Prupe.3G167600_v2.0.a1
pyrus_communis	pycom09g07700 pycom17g13750
rosa_chinensis	RchiOBHm_Chr2g0150201
rosa_laevigata	RLG00000020478
rosa_multiflora	Rmu_ssc0000020.1_g000009
rosa_roxburghii	Rroxscaffold_2G00097370
rosa_rugosa	Rorug02G0419700 Rorug02G0419800
rosa_samantha	Rh2BG491100 Rh2CG465200
rosa_wichuraiana	Rw2G039070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	154
Acc16I	TGCGCA	1 cut(s)	1592
AccB7I	CCANNNNNTGG	1 cut(s)	1618
AccI	GTMKAC	1 cut(s)	506
AccII	CGCG	2 cut(s)	256, 2202
AciI	CCGC	2 cut(s)	326, 1979
AclWI	GGATC	5 cut(s)	680, 693, 1579, 2252, 2265
AcsI	RAATTY	4 cut(s)	78, 572, 1910, 2191
AcuI	CTGAAG	2 cut(s)	531, 681
AcvI	CACGTG	1 cut(s)	1667
AcyI	GRCGYC	1 cut(s)	186
AfaI	GTAC	4 cut(s)	1270, 1302, 1351, 1883
AfiI	CCNNNNNNNGG	1 cut(s)	1618
AflII	CTTAAG	2 cut(s)	815, 1117
AflIII	ACRYGT	3 cut(s)	649, 1325, 2200
AjiI	CACGTC	1 cut(s)	1328
AjnI	CCWGG	6 cut(s)	633, 1333, 1422, 1537, 1890, 1938
AleI	CACNNNNGTG	1 cut(s)	170
Alw21I	GWGCWC	2 cut(s)	844, 2274
Alw26I	GTCTC	4 cut(s)	277, 708, 2023, 2352
Alw44I	GTGCAC	1 cut(s)	840
AlwI	GGATC	5 cut(s)	680, 693, 1579, 2252, 2265
AlwNI	CAGNNNCTG	3 cut(s)	1106, 1109, 2042
Ama87I	CYCGRG	1 cut(s)	194
AoxI	GGCC	9 cut(s)	832, 1041, 1185, 1217, 1340, 2096, 2102, 2340, 2376
ApaLI	GTGCAC	1 cut(s)	840
ApoI	RAATTY	4 cut(s)	78, 572, 1910, 2191
ArsI	GACNNNNNNTTYG	4 cut(s)	886, 918, 2132, 2164
Asp700I	GAANNNNTTC	1 cut(s)	1659
AspLEI	GCGC	2 cut(s)	258, 1593
AspS9I	GGNCC	7 cut(s)	833, 1041, 1186, 1420, 1445, 2096, 2111
AsuC2I	CCSGG	1 cut(s)	2276
AsuHPI	GGTGA	4 cut(s)	184, 656, 800, 1868
AvaI	CYCGRG	1 cut(s)	194
AvaII	GGWCC	3 cut(s)	1420, 1445, 2111
BaeGI	GKGCMC	2 cut(s)	844, 1402
BamHI	GGATCC	2 cut(s)	685, 2257
BanII	GRGCYC	1 cut(s)	2274
BauI	CACGAG	3 cut(s)	780, 837, 1176
BbrPI	CACGTG	1 cut(s)	1667
BbsI	GAAGAC	2 cut(s)	152, 842
Bbv12I	GWGCWC	2 cut(s)	844, 2274
BbvCI	CCTCAGC	2 cut(s)	465, 756
BceAI	ACGGC	5 cut(s)	156, 165, 199, 1793, 2391
BcgI	CGANNNNNNTGC	2 cut(s)	881, 915
BciT130I	CCWGG	6 cut(s)	635, 1335, 1424, 1539, 1892, 1940
BclI	TGATCA	1 cut(s)	745
BcnI	CCSGG	1 cut(s)	2276
BcoDI	GTCTC	4 cut(s)	277, 708, 2023, 2352
BfaI	CTAG	5 cut(s)	461, 1221, 1481, 1832, 2138
BfmI	CTRYAG	3 cut(s)	707, 1128, 2263
BfrI	CTTAAG	2 cut(s)	815, 1117
BglII	AGATCT	2 cut(s)	1834, 2411
BmcAI	AGTACT	1 cut(s)	1270
Bme1390I	CCNGG	7 cut(s)	635, 1335, 1424, 1539, 1892, 1940, 2276
Bme18I	GGWCC	3 cut(s)	1420, 1445, 2111
BmeT110I	CYCGRG	1 cut(s)	194
BmgBI	CACGTC	1 cut(s)	1328
BmgT120I	GGNCC	7 cut(s)	833, 1041, 1186, 1420, 1445, 2096, 2111
BmiI	GGNNCC	4 cut(s)	687, 1686, 2112, 2259
BmrFI	CCNGG	7 cut(s)	635, 1335, 1424, 1539, 1892, 1940, 2276
BmrI	ACTGGG	1 cut(s)	1306
BmsI	GCATC	2 cut(s)	223, 1646
BmuI	ACTGGG	1 cut(s)	1306
BpiI	GAAGAC	2 cut(s)	152, 842
BpmI	CTGGAG	2 cut(s)	656, 1131
Bpu10I	CCTNAGC	5 cut(s)	237, 465, 756, 1279, 1755
BpuEI	CTTGAG	1 cut(s)	957
BpuMI	CCSGG	1 cut(s)	2276
BsaAI	YACGTR	2 cut(s)	1513, 1667
BsaBI	GATNNNNATC	1 cut(s)	1863
BsaHI	GRCGYC	1 cut(s)	186
BsaI	GGTCTC	1 cut(s)	2352
BsaJI	CCNNGG	5 cut(s)	633, 1056, 1357, 2099, 2379
BsaXI	ACNNNNNCTCC	4 cut(s)	548, 578, 1297, 1327
Bsc4I	CCNNNNNNNGG	1 cut(s)	1618
Bse118I	RCCGGY	1 cut(s)	169
Bse1I	ACTGG	2 cut(s)	1301, 1971
Bse3DI	GCAATG	4 cut(s)	1622, 2015, 2235, 2319
Bse8I	GATNNNNATC	1 cut(s)	1863
BseBI	CCWGG	6 cut(s)	635, 1335, 1424, 1539, 1892, 1940
BseDI	CCNNGG	5 cut(s)	633, 1056, 1357, 2099, 2379
BseJI	GATNNNNATC	1 cut(s)	1863
BseLI	CCNNNNNNNGG	1 cut(s)	1618
BseMI	GCAATG	4 cut(s)	1622, 2015, 2235, 2319
BseMII	CTCAG	6 cut(s)	251, 456, 594, 747, 1017, 1746
BseNI	ACTGG	2 cut(s)	1301, 1971
BseRI	GAGGAG	3 cut(s)	622, 939, 1865
BseSI	GKGCMC	2 cut(s)	844, 1402
BseYI	CCCAGC	1 cut(s)	1598
BsgI	GTGCAG	2 cut(s)	795, 1689
Bsh1236I	CGCG	2 cut(s)	256, 2202
Bsh1285I	CGRYCG	1 cut(s)	158
BshFI	GGCC	9 cut(s)	834, 1043, 1187, 1219, 1342, 2098, 2104, 2342, 2378
BsiEI	CGRYCG	1 cut(s)	158
BsiHKAI	GWGCWC	2 cut(s)	844, 2274
BsiHKCI	CYCGRG	1 cut(s)	194
BsiSI	CCGG	2 cut(s)	170, 2276
BslFI	GGGAC	1 cut(s)	34
BslI	CCNNNNNNNGG	1 cut(s)	1618
BsmAI	GTCTC	4 cut(s)	277, 708, 2023, 2352
BsmFI	GGGAC	1 cut(s)	34
BsmI	GAATGC	4 cut(s)	365, 718, 865, 1703
BsnI	GGCC	9 cut(s)	834, 1043, 1187, 1219, 1342, 2098, 2104, 2342, 2378
Bso31I	GGTCTC	1 cut(s)	2352
BsoBI	CYCGRG	1 cut(s)	194
Bsp1286I	GDGCHC	3 cut(s)	844, 1402, 2274
Bsp1407I	TGTACA	1 cut(s)	1881
BspACI	CCGC	2 cut(s)	326, 1979
BspANI	GGCC	9 cut(s)	834, 1043, 1187, 1219, 1342, 2098, 2104, 2342, 2378
BspCNI	CTCAG	6 cut(s)	250, 457, 595, 748, 1018, 1747
BspFNI	CGCG	2 cut(s)	256, 2202
BspHI	TCATGA	1 cut(s)	454
BspLI	GGNNCC	4 cut(s)	687, 1686, 2112, 2259
BspMAI	CTGCAG	1 cut(s)	1132
BspPI	GGATC	5 cut(s)	680, 693, 1579, 2252, 2265
BspQI	GCTCTTC	1 cut(s)	1074
BspTI	CTTAAG	2 cut(s)	815, 1117
BspTNI	GGTCTC	1 cut(s)	2352
BsrDI	GCAATG	4 cut(s)	1622, 2015, 2235, 2319
BsrFI	RCCGGY	1 cut(s)	169
BsrGI	TGTACA	1 cut(s)	1881
BsrI	ACTGG	2 cut(s)	1301, 1971
BssAI	RCCGGY	1 cut(s)	169
BssECI	CCNNGG	5 cut(s)	633, 1056, 1357, 2099, 2379
BssNI	GRCGYC	1 cut(s)	186
BssSI	CACGAG	3 cut(s)	780, 837, 1176
BssT1I	CCWWGG	2 cut(s)	1357, 2099
Bst2BI	CACGAG	3 cut(s)	780, 837, 1176
Bst2UI	CCWGG	6 cut(s)	635, 1335, 1424, 1539, 1892, 1940
Bst4CI	ACNGT	8 cut(s)	288, 448, 848, 951, 1160, 1449, 2044, 2130
Bst6I	CTCTTC	1 cut(s)	1074
BstACI	GRCGYC	1 cut(s)	186
BstAFI	CTTAAG	2 cut(s)	815, 1117
BstAPI	GCANNNNNTGC	2 cut(s)	935, 2243
BstAUI	TGTACA	1 cut(s)	1881
BstBAI	YACGTR	2 cut(s)	1513, 1667
BstC8I	GCNNGC	9 cut(s)	167, 731, 753, 766, 770, 1233, 1340, 1629, 1827
BstDEI	CTNAG	7 cut(s)	237, 465, 603, 756, 1026, 1279, 1755
BstFNI	CGCG	2 cut(s)	256, 2202
BstHHI	GCGC	2 cut(s)	258, 1593
BstMAI	GTCTC	4 cut(s)	277, 708, 2023, 2352
BstMCI	CGRYCG	1 cut(s)	158
BstNI	CCWGG	6 cut(s)	635, 1335, 1424, 1539, 1892, 1940
BstNSI	RCATGY	4 cut(s)	653, 1088, 1522, 1829
BstSCI	CCNGG	7 cut(s)	633, 1333, 1422, 1537, 1890, 1938, 2274
BstSFI	CTRYAG	3 cut(s)	707, 1128, 2263
BstSLI	GKGCMC	2 cut(s)	844, 1402
BstUI	CGCG	2 cut(s)	256, 2202
BstV2I	GAAGAC	2 cut(s)	152, 842
BstX2I	RGATCY	5 cut(s)	685, 1571, 1834, 2257, 2411
BstXI	CCANNNNNNTGG	1 cut(s)	1681
BstYI	RGATCY	5 cut(s)	685, 1571, 1834, 2257, 2411
BsuRI	GGCC	9 cut(s)	834, 1043, 1187, 1219, 1342, 2098, 2104, 2342, 2378
BtgZI	GCGATG	1 cut(s)	143
BtrI	CACGTC	1 cut(s)	1328
BtsIMutI	CAGTG	3 cut(s)	501, 981, 1156
Cac8I	GCNNGC	9 cut(s)	167, 731, 753, 766, 770, 1233, 1340, 1629, 1827
CaiI	CAGNNNCTG	3 cut(s)	1106, 1109, 2042
CciI	TCATGA	1 cut(s)	454
CfoI	GCGC	2 cut(s)	258, 1593
Cfr10I	RCCGGY	1 cut(s)	169
Cfr13I	GGNCC	7 cut(s)	833, 1041, 1186, 1420, 1445, 2096, 2111
CseI	GACGC	1 cut(s)	175
CsiI	ACCWGGT	1 cut(s)	1537
Csp6I	GTAC	4 cut(s)	1269, 1301, 1350, 1882
CviQI	GTAC	4 cut(s)	1269, 1301, 1350, 1882
DdeI	CTNAG	7 cut(s)	237, 465, 603, 756, 1026, 1279, 1755
DraI	TTTAAA	1 cut(s)	312
DrdI	GACNNNNNNGTC	1 cut(s)	154
DseDI	GACNNNNNNGTC	1 cut(s)	154
Eam1104I	CTCTTC	1 cut(s)	1074
EarI	CTCTTC	1 cut(s)	1074
Ecl136II	GAGCTC	1 cut(s)	2272
Eco130I	CCWWGG	2 cut(s)	1357, 2099
Eco147I	AGGCCT	3 cut(s)	1219, 1342, 2104
Eco24I	GRGCYC	1 cut(s)	2274
Eco31I	GGTCTC	1 cut(s)	2352
Eco32I	GATATC	2 cut(s)	390, 878
Eco47I	GGWCC	3 cut(s)	1420, 1445, 2111
Eco53kI	GAGCTC	1 cut(s)	2272
Eco57I	CTGAAG	2 cut(s)	531, 681
Eco72I	CACGTG	1 cut(s)	1667
Eco88I	CYCGRG	1 cut(s)	194
EcoICRI	GAGCTC	1 cut(s)	2272
EcoO109I	RGGNCCY	1 cut(s)	2111
EcoRII	CCWGG	6 cut(s)	633, 1333, 1422, 1537, 1890, 1938
EcoRV	GATATC	2 cut(s)	390, 878
EcoT14I	CCWWGG	2 cut(s)	1357, 2099
EcoT22I	ATGCAT	1 cut(s)	1639
EcoT38I	GRGCYC	1 cut(s)	2274
ErhI	CCWWGG	2 cut(s)	1357, 2099
FaqI	GGGAC	1 cut(s)	34
FauNDI	CATATG	2 cut(s)	919, 2156
FbaI	TGATCA	1 cut(s)	745
FblI	GTMKAC	1 cut(s)	506
FriOI	GRGCYC	1 cut(s)	2274
FspAI	RTGCGCAY	1 cut(s)	1592
FspBI	CTAG	5 cut(s)	461, 1221, 1481, 1832, 2138
FspI	TGCGCA	1 cut(s)	1592
GlaI	GCGC	2 cut(s)	257, 1592
GsaI	CCCAGC	1 cut(s)	1602
GsuI	CTGGAG	2 cut(s)	656, 1131
HaeIII	GGCC	9 cut(s)	834, 1043, 1187, 1219, 1342, 2098, 2104, 2342, 2378
HapII	CCGG	2 cut(s)	170, 2276
HgaI	GACGC	1 cut(s)	175
HhaI	GCGC	2 cut(s)	258, 1593
Hin1I	GRCGYC	1 cut(s)	186
Hin6I	GCGC	2 cut(s)	256, 1591
HinP1I	GCGC	2 cut(s)	256, 1591
HincII	GTYRAC	2 cut(s)	138, 1331
HindII	GTYRAC	2 cut(s)	138, 1331
HindIII	AAGCTT	2 cut(s)	621, 2071
HinfI	GANTC	4 cut(s)	22, 612, 778, 986
HpaI	GTTAAC	1 cut(s)	138
HpaII	CCGG	2 cut(s)	170, 2276
HphI	GGTGA	4 cut(s)	184, 656, 800, 1868
Hpy166II	GTNNAC	9 cut(s)	57, 73, 138, 507, 647, 791, 842, 1331, 1516
Hpy188I	TCNGA	9 cut(s)	223, 394, 422, 550, 661, 858, 1027, 1735, 2062
Hpy8I	GTNNAC	9 cut(s)	57, 73, 138, 507, 647, 791, 842, 1331, 1516
HpyCH4III	ACNGT	8 cut(s)	288, 448, 848, 951, 1160, 1449, 2044, 2130
HpyCH4IV	ACGT	4 cut(s)	246, 1327, 1512, 1666
HpyF3I	CTNAG	7 cut(s)	237, 465, 603, 756, 1026, 1279, 1755
HpySE526I	ACGT	4 cut(s)	246, 1327, 1512, 1666
Hsp92I	GRCGYC	1 cut(s)	186
HspAI	GCGC	2 cut(s)	256, 1591
Ksp22I	TGATCA	1 cut(s)	745
KspAI	GTTAAC	1 cut(s)	138
LguI	GCTCTTC	1 cut(s)	1074
LmnI	GCTCC	5 cut(s)	266, 926, 1318, 1690, 2277
LweI	GCATC	2 cut(s)	223, 1646
MabI	ACCWGGT	1 cut(s)	1537
MaeI	CTAG	5 cut(s)	461, 1221, 1481, 1832, 2138
MaeII	ACGT	4 cut(s)	246, 1327, 1512, 1666
MaeIII	GTNAC	1 cut(s)	1154
MflI	RGATCY	5 cut(s)	685, 1571, 1834, 2257, 2411
MhlI	GDGCHC	3 cut(s)	844, 1402, 2274
MluI	ACGCGT	1 cut(s)	2200
MlyI	GAGTC	3 cut(s)	16, 621, 772
MmeI	TCCRAC	3 cut(s)	663, 1340, 1423
Mph1103I	ATGCAT	1 cut(s)	1639
MroXI	GAANNNNTTC	1 cut(s)	1659
MslI	CAYNNNNRTG	1 cut(s)	170
MspA1I	CMGCKG	2 cut(s)	323, 1106
MspCI	CTTAAG	2 cut(s)	815, 1117
MspI	CCGG	2 cut(s)	170, 2276
MspR9I	CCNGG	7 cut(s)	635, 1335, 1424, 1539, 1892, 1940, 2276
Mva1269I	GAATGC	4 cut(s)	365, 718, 865, 1703
MvaI	CCWGG	6 cut(s)	635, 1335, 1424, 1539, 1892, 1940
MvnI	CGCG	2 cut(s)	256, 2202
NciI	CCSGG	1 cut(s)	2276
NdeI	CATATG	2 cut(s)	919, 2156
NlaIV	GGNNCC	4 cut(s)	687, 1686, 2112, 2259
NmuCI	GTSAC	1 cut(s)	1154
NsbI	TGCGCA	1 cut(s)	1592
NsiI	ATGCAT	1 cut(s)	1639
NspI	RCATGY	4 cut(s)	653, 1088, 1522, 1829
OliI	CACNNNNGTG	1 cut(s)	170
PaeI	GCATGC	1 cut(s)	1829
PaeR7I	CTCGAG	1 cut(s)	194
PagI	TCATGA	1 cut(s)	454
PceI	AGGCCT	3 cut(s)	1219, 1342, 2104
PciI	ACATGT	1 cut(s)	649
PciSI	GCTCTTC	1 cut(s)	1074
PcsI	WCGNNNNNNNCGW	1 cut(s)	155
PctI	GAATGC	4 cut(s)	365, 718, 865, 1703
PdmI	GAANNNNTTC	1 cut(s)	1659
PfeI	GAWTC	1 cut(s)	986
PflMI	CCANNNNNTGG	1 cut(s)	1618
PfoI	TCCNGGA	3 cut(s)	1422, 1938, 2274
PleI	GAGTC	3 cut(s)	16, 620, 772
PmaCI	CACGTG	1 cut(s)	1667
PmlI	CACGTG	1 cut(s)	1667
PpsI	GAGTC	3 cut(s)	16, 620, 772
Ppu21I	YACGTR	2 cut(s)	1513, 1667
PpuMI	RGGWCCY	1 cut(s)	2111
PscI	ACATGT	1 cut(s)	649
Psp124BI	GAGCTC	1 cut(s)	2274
Psp5II	RGGWCCY	1 cut(s)	2111
Psp6I	CCWGG	6 cut(s)	633, 1333, 1422, 1537, 1890, 1938
PspCI	CACGTG	1 cut(s)	1667
PspFI	CCCAGC	1 cut(s)	1598
PspGI	CCWGG	6 cut(s)	633, 1333, 1422, 1537, 1890, 1938
PspN4I	GGNNCC	4 cut(s)	687, 1686, 2112, 2259
PspPI	GGNCC	7 cut(s)	833, 1041, 1186, 1420, 1445, 2096, 2111
PspPPI	RGGWCCY	1 cut(s)	2111
PspXI	VCTCGAGB	1 cut(s)	194
PstI	CTGCAG	1 cut(s)	1132
PstNI	CAGNNNCTG	3 cut(s)	1106, 1109, 2042
PsuI	RGATCY	5 cut(s)	685, 1571, 1834, 2257, 2411
PvuII	CAGCTG	2 cut(s)	323, 1106
RsaI	GTAC	4 cut(s)	1270, 1302, 1351, 1883
RsaNI	GTAC	4 cut(s)	1269, 1301, 1350, 1882
RseI	CAYNNNNRTG	1 cut(s)	170
SacI	GAGCTC	1 cut(s)	2274
SapI	GCTCTTC	1 cut(s)	1074
Sau96I	GGNCC	7 cut(s)	833, 1041, 1186, 1420, 1445, 2096, 2111
ScaI	AGTACT	1 cut(s)	1270
SchI	GAGTC	3 cut(s)	16, 621, 772
ScrFI	CCNGG	7 cut(s)	635, 1335, 1424, 1539, 1892, 1940, 2276
SduI	GDGCHC	3 cut(s)	844, 1402, 2274
SexAI	ACCWGGT	1 cut(s)	1537
SfaNI	GCATC	2 cut(s)	223, 1646
SfcI	CTRYAG	3 cut(s)	707, 1128, 2263
Sfr274I	CTCGAG	1 cut(s)	194
SgrAI	CRCCGGYG	1 cut(s)	169
SinI	GGWCC	3 cut(s)	1420, 1445, 2111
SlaI	CTCGAG	1 cut(s)	194
SmiMI	CAYNNNNRTG	1 cut(s)	170
SmlI	CTYRAG	4 cut(s)	194, 815, 972, 1117
SmoI	CTYRAG	4 cut(s)	194, 815, 972, 1117
SphI	GCATGC	1 cut(s)	1829
SseBI	AGGCCT	3 cut(s)	1219, 1342, 2104
SsiI	CCGC	2 cut(s)	326, 1979
SspI	AATATT	1 cut(s)	1935
SspMI	CTAG	5 cut(s)	461, 1221, 1481, 1832, 2138
SstI	GAGCTC	1 cut(s)	2274
StuI	AGGCCT	3 cut(s)	1219, 1342, 2104
StyD4I	CCNGG	7 cut(s)	633, 1333, 1422, 1537, 1890, 1938, 2274
StyI	CCWWGG	2 cut(s)	1357, 2099
TaaI	ACNGT	8 cut(s)	288, 448, 848, 951, 1160, 1449, 2044, 2130
TaiI	ACGT	4 cut(s)	249, 1330, 1515, 1669
TaqI	TCGA	6 cut(s)	158, 195, 231, 615, 776, 2356
TaqII	GACCGA	1 cut(s)	144
TatI	WGTACW	3 cut(s)	1268, 1349, 1881
TauI	GCSGC	1 cut(s)	1982
TfiI	GAWTC	1 cut(s)	986
TscAI	CASTG	3 cut(s)	501, 988, 1163
TseFI	GTSAC	1 cut(s)	1154
Tsp45I	GTSAC	1 cut(s)	1154
TspGWI	ACGGA	2 cut(s)	73, 785
TspRI	CASTG	3 cut(s)	501, 988, 1163
Van91I	CCANNNNNTGG	1 cut(s)	1618
Vha464I	CTTAAG	2 cut(s)	815, 1117
VneI	GTGCAC	1 cut(s)	840
VpaK11BI	GGWCC	3 cut(s)	1420, 1445, 2111
XapI	RAATTY	4 cut(s)	78, 572, 1910, 2191
XbaI	TCTAGA	2 cut(s)	1831, 2137
XceI	RCATGY	4 cut(s)	653, 1088, 1522, 1829
XhoI	CTCGAG	1 cut(s)	194
XmiI	GTMKAC	1 cut(s)	506
XmnI	GAANNNNTTC	1 cut(s)	1659
XspI	CTAG	5 cut(s)	461, 1221, 1481, 1832, 2138
ZrmI	AGTACT	1 cut(s)	1270
Zsp2I	ATGCAT	1 cut(s)	1639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.