Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0009323

Physical Location & Seq

Genomic Coordinates Forward (+)

69045230 .. 69051523

Gene Structure 6294 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG491100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGCGTTAACGGCGAAGACGGCTCGGTCGAGAGGCACGCCGGTGAAGGAGAACGGCGTCAAGCTCGAGGAAGGGCTTAATGTGTTCAAGTCTGATAGGTTCGATGCTCAGGGCTACGTCCAGTCGCGCTGCTCCCTCAACGAGAAGGAGTTGAGACAGTTCTGCTCAAATCTCTTTGATTTAAAGAAGGCAGCTGCGGAGGAAATGCGTAGAAGTGTCTATGCTAATTATTCGGCATTCATACAAACTTCAAAAGAGATATCAGATTTGGAGGGGCAGCTTTCCTCTATCAGAAATCTGCTATCTACTCTTGCTACTGTAAATCATGATCTAGCTGAGGGGGTAAAGATTGATTTATCTAAATCAGTGGAAGGGTCTACTGAAAATGGTTCATTAACTTTTGAAGATAGAGAGCCTTCAGACTTGGAGAATTGGTTGGCAGAATTTCCTGATCTCTTGGATGTTTTGTTAGCTGAGAGGAGAGTCGATGAAGCTTTAGCTGCCCTGGAGGAAGGTGAACATGTGGCTTCTGAAGCAAAACAACTAAAGATGTTGGATCCAGCTCTACTCTTGTGTCTACAGAATGCTATTACTGAACGCAGGCAAAAGTTAGCTGATCAGCTTGCTGAGGCTGCTTGCCAGCCTTCGACTCGTGGTGGTGAACTCCGTTCATCTATATCTGCACTTAAGAAACTTGGGGATGGCCCTCGTGCACACAGTCTTCTTCTGAATGCACATTACCAGAGATATCAGTATAATATGCAAAGCCTTCGTCCATCAAGCACTTCATATGGAGGAGCATATACTGCTGCTCTCTCACAGTTAGTGTTCTCTGCTATTGCTCAAGCTGCCACTGATTCTGCTGCTATATTTGAGAATGAACCAGATTATACTTCTGAGCTTGTTATGTGGGCCATAAAGCAAACCGAGGCTTTCGCTCTTCTCATTAAAAGACATGCGTTAGCTTCATCAGCAGCTGCTGGAGGCTTAAGAGCTGCTGCAGAGTGTGTTCAAATTGCATTAGGTCACTGTTCCTTGTTAGAAGCTCGTGGCTTGGCCCTTTGTCCTGTGCTTTTGAAACTTTTTAGGCCTAGTGTTGAGCAAGCATTAGAGGCTAACTTAAAACGAATTGAAGAAAGTACTGCTGCCTTAGCTGCTGCTGATGACTGGGTACTTACGACTGCTCCAACAGCGACACGTCAACCTGGCAGGCCTTCAAGTACATCCCTTGGTAATACAACAGCATTTCAACATAAACTTACAAGTAGTGCCCATCGGTTCAATTTGATGGTCCAGGATTTCTTTGAGGATGTTGGACCGTTGTTGAGTATGCAGTTGGGAGGTCAAACACTAGAAGGTTTGTTCCAAGTGTTTAACTCATACGTGAACATGCTCATAAAAGCATTACCAGGTTCAATGGATGAAGAAGCAAACTATGAAGGATCTGGGAATAAAATTGTGCGCATGGCTGGGAATGAAGCCCAACAGATGGCATTGCTGGCAAATGCATCATTATTAGCAGATGAACTACTTCCACGTGCAGCCATGAAGTTGGCTCCAATAATTAAGGTTGCATTCAAGGACGATCTTCGTAGAAGATCATCAGATAGGCAAAATCGCCATCCTGAGCAAAGAGAATGGAAGAAACGGCTTGTCAGCTCGGTTGATAGACTAAAAGATAGTTTTTGTCGTCAGCATGCTCTAGATCTCATTTTTACAGAGGAGGGTGATAGTCATCTTACTGCTGATATGTACATAAACCTGGATGGGAATGTGGATGAATTTGAGTGGTTTCCATCCTTAATATTCCAGGAACTTTTTGTAAAACTAAACAGGATGACCAGTATAGCGGCAGATATGTTTGTTGGCAGAGAGAGATTTACTACATTGCTATTTATGAGACTAACAGAAACTGTCATCTTGTGGCTTTCCGAAGATCAAAGCTTTTGGGATGATATTGAGGATGGGCCAAGGCCTTTGGGTCCTCTTGGCTTACAACAGGCAAGTAATTTCTGGTCAAATGAATTAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0008104 GO:0008150 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022607 GO:0031503 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048278 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C Vps51

Protein Analysis

677

Amino Acids

75.06

Weight (kDa)

5.2

Isoelectric Point (pI)

41.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS51_Exo84_N	PF08700	29 - 106	8.8e-14	Vps51/EXO84/COG1 N-terminal
Exo84_C	PF16528	145 - 353	2.3e-20	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49830 AT5G49830 AT5G49830
fragaria_vesca	FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400 FvH4_6g37400
malus_domestica	MD09G1158400.v1.1 MD17G1144400.v1.1
prunus_persica	Prupe.3G167600_v2.0.a1
pyrus_communis	pycom09g07700 pycom17g13750
rosa_chinensis	RchiOBHm_Chr2g0150201
rosa_laevigata	RLG00000020478
rosa_multiflora	Rmu_ssc0000020.1_g000009
rosa_roxburghii	Rroxscaffold_2G00097370
rosa_rugosa	Rorug02G0419700 Rorug02G0419800
rosa_samantha	Rh2BG491100 Rh2CG465200
rosa_wichuraiana	Rw2G039070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	25
Acc16I	TGCGCA	1 cut(s)	1463
AccB7I	CCANNNNNTGG	1 cut(s)	1489
AccI	GTMKAC	2 cut(s)	377, 577
AccII	CGCG	1 cut(s)	127
AciI	CCGC	2 cut(s)	197, 1850
AclWI	GGATC	3 cut(s)	551, 564, 1450
AcsI	RAATTY	2 cut(s)	443, 1781
AcuI	CTGAAG	2 cut(s)	402, 552
AcvI	CACGTG	1 cut(s)	1538
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	4 cut(s)	1141, 1173, 1222, 1754
AfiI	CCNNNNNNNGG	1 cut(s)	1489
AflII	CTTAAG	2 cut(s)	686, 988
AflIII	ACRYGT	2 cut(s)	520, 1196
AjiI	CACGTC	1 cut(s)	1199
AjnI	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
AleI	CACNNNNGTG	1 cut(s)	41
Alw21I	GWGCWC	1 cut(s)	715
Alw26I	GTCTC	2 cut(s)	148, 1894
Alw44I	GTGCAC	1 cut(s)	711
AlwI	GGATC	3 cut(s)	551, 564, 1450
AlwNI	CAGNNNCTG	3 cut(s)	977, 980, 1913
Ama87I	CYCGRG	1 cut(s)	65
AoxI	GGCC	7 cut(s)	703, 912, 1056, 1088, 1211, 1967, 1973
ApaLI	GTGCAC	1 cut(s)	711
ApoI	RAATTY	2 cut(s)	443, 1781
ArsI	GACNNNNNNTTYG	2 cut(s)	757, 789
AseI	ATTAAT	1 cut(s)	2027
Asp700I	GAANNNNTTC	1 cut(s)	1530
AspLEI	GCGC	2 cut(s)	129, 1464
AspS9I	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
AsuHPI	GGTGA	4 cut(s)	55, 527, 671, 1739
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	3 cut(s)	1291, 1316, 1982
BaeGI	GKGCMC	2 cut(s)	715, 1273
BamHI	GGATCC	1 cut(s)	556
BauI	CACGAG	3 cut(s)	651, 708, 1047
BbrPI	CACGTG	1 cut(s)	1538
BbsI	GAAGAC	2 cut(s)	23, 713
Bbv12I	GWGCWC	1 cut(s)	715
BbvCI	CCTCAGC	2 cut(s)	336, 627
BccI	CCATC	9 cut(s)	695, 784, 1281, 1282, 1483, 1629, 1760, 1804, 1958
BceAI	ACGGC	4 cut(s)	27, 36, 70, 1664
BcgI	CGANNNNNNTGC	2 cut(s)	752, 786
BciT130I	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BclI	TGATCA	1 cut(s)	616
BcoDI	GTCTC	2 cut(s)	148, 1894
BfaI	CTAG	4 cut(s)	332, 1092, 1352, 1703
BfmI	CTRYAG	2 cut(s)	578, 999
BfrI	CTTAAG	2 cut(s)	686, 988
BglII	AGATCT	1 cut(s)	1705
BmcAI	AGTACT	1 cut(s)	1141
Bme1390I	CCNGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
Bme18I	GGWCC	3 cut(s)	1291, 1316, 1982
BmeT110I	CYCGRG	1 cut(s)	65
BmgBI	CACGTC	1 cut(s)	1199
BmgT120I	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
BmiI	GGNNCC	3 cut(s)	558, 1557, 1983
BmrFI	CCNGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BmrI	ACTGGG	1 cut(s)	1177
BmsI	GCATC	2 cut(s)	94, 1517
BmuI	ACTGGG	1 cut(s)	1177
BpiI	GAAGAC	2 cut(s)	23, 713
BpmI	CTGGAG	2 cut(s)	527, 1002
Bpu10I	CCTNAGC	5 cut(s)	108, 336, 627, 1150, 1626
BpuEI	CTTGAG	1 cut(s)	828
BsaAI	YACGTR	2 cut(s)	1384, 1538
BsaBI	GATNNNNATC	1 cut(s)	1734
BsaHI	GRCGYC	1 cut(s)	57
BsaJI	CCNNGG	4 cut(s)	504, 927, 1228, 1970
BsaXI	ACNNNNNCTCC	4 cut(s)	419, 449, 1168, 1198
Bsc4I	CCNNNNNNNGG	1 cut(s)	1489
Bse118I	RCCGGY	1 cut(s)	40
Bse1I	ACTGG	3 cut(s)	121, 1172, 1842
Bse3DI	GCAATG	2 cut(s)	1493, 1886
Bse8I	GATNNNNATC	1 cut(s)	1734
BseBI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BseDI	CCNNGG	4 cut(s)	504, 927, 1228, 1970
BseJI	GATNNNNATC	1 cut(s)	1734
BseLI	CCNNNNNNNGG	1 cut(s)	1489
BseMI	GCAATG	2 cut(s)	1493, 1886
BseMII	CTCAG	6 cut(s)	122, 327, 465, 618, 888, 1617
BseNI	ACTGG	3 cut(s)	121, 1172, 1842
BseRI	GAGGAG	3 cut(s)	493, 810, 1736
BseSI	GKGCMC	2 cut(s)	715, 1273
BseYI	CCCAGC	1 cut(s)	1469
BsgI	GTGCAG	2 cut(s)	666, 1560
Bsh1236I	CGCG	1 cut(s)	127
Bsh1285I	CGRYCG	1 cut(s)	29
BshFI	GGCC	7 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975
BsiEI	CGRYCG	1 cut(s)	29
BsiHKAI	GWGCWC	1 cut(s)	715
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	1 cut(s)	41
BslI	CCNNNNNNNGG	1 cut(s)	1489
BsmAI	GTCTC	2 cut(s)	148, 1894
BsmI	GAATGC	4 cut(s)	236, 589, 736, 1574
BsnI	GGCC	7 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975
BsoBI	CYCGRG	1 cut(s)	65
Bsp1286I	GDGCHC	2 cut(s)	715, 1273
Bsp1407I	TGTACA	1 cut(s)	1752
Bsp143I	GATC	9 cut(s)	328, 451, 556, 616, 1442, 1585, 1598, 1705, 1936
BspACI	CCGC	2 cut(s)	197, 1850
BspANI	GGCC	7 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975
BspCNI	CTCAG	6 cut(s)	121, 328, 466, 619, 889, 1618
BspFNI	CGCG	1 cut(s)	127
BspHI	TCATGA	1 cut(s)	325
BspLI	GGNNCC	3 cut(s)	558, 1557, 1983
BspMAI	CTGCAG	1 cut(s)	1003
BspPI	GGATC	3 cut(s)	551, 564, 1450
BspQI	GCTCTTC	1 cut(s)	945
BspTI	CTTAAG	2 cut(s)	686, 988
BsrDI	GCAATG	2 cut(s)	1493, 1886
BsrFI	RCCGGY	1 cut(s)	40
BsrGI	TGTACA	1 cut(s)	1752
BsrI	ACTGG	3 cut(s)	121, 1172, 1842
BssAI	RCCGGY	1 cut(s)	40
BssECI	CCNNGG	4 cut(s)	504, 927, 1228, 1970
BssMI	GATC	9 cut(s)	328, 451, 556, 616, 1442, 1585, 1598, 1705, 1936
BssNI	GRCGYC	1 cut(s)	57
BssSI	CACGAG	3 cut(s)	651, 708, 1047
BssT1I	CCWWGG	2 cut(s)	1228, 1970
Bst2BI	CACGAG	3 cut(s)	651, 708, 1047
Bst2UI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
Bst4CI	ACNGT	7 cut(s)	159, 319, 719, 822, 1031, 1320, 1915
Bst6I	CTCTTC	1 cut(s)	945
BstACI	GRCGYC	1 cut(s)	57
BstAFI	CTTAAG	2 cut(s)	686, 988
BstAPI	GCANNNNNTGC	1 cut(s)	806
BstAUI	TGTACA	1 cut(s)	1752
BstBAI	YACGTR	2 cut(s)	1384, 1538
BstC8I	GCNNGC	9 cut(s)	38, 602, 624, 637, 641, 1104, 1211, 1500, 1698
BstDEI	CTNAG	7 cut(s)	108, 336, 474, 627, 897, 1150, 1626
BstFNI	CGCG	1 cut(s)	127
BstHHI	GCGC	2 cut(s)	129, 1464
BstKTI	GATC	9 cut(s)	331, 454, 559, 619, 1445, 1588, 1601, 1708, 1939
BstMAI	GTCTC	2 cut(s)	148, 1894
BstMBI	GATC	9 cut(s)	328, 451, 556, 616, 1442, 1585, 1598, 1705, 1936
BstMCI	CGRYCG	1 cut(s)	29
BstNI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
BstNSI	RCATGY	4 cut(s)	524, 959, 1393, 1700
BstSCI	CCNGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
BstSFI	CTRYAG	2 cut(s)	578, 999
BstSLI	GKGCMC	2 cut(s)	715, 1273
BstUI	CGCG	1 cut(s)	127
BstV2I	GAAGAC	2 cut(s)	23, 713
BstX2I	RGATCY	3 cut(s)	556, 1442, 1705
BstXI	CCANNNNNNTGG	1 cut(s)	1552
BstYI	RGATCY	3 cut(s)	556, 1442, 1705
BsuRI	GGCC	7 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975
BtrI	CACGTC	1 cut(s)	1199
BtsIMutI	CAGTG	3 cut(s)	372, 852, 1027
Cac8I	GCNNGC	9 cut(s)	38, 602, 624, 637, 641, 1104, 1211, 1500, 1698
CaiI	CAGNNNCTG	3 cut(s)	977, 980, 1913
CciI	TCATGA	1 cut(s)	325
CfoI	GCGC	2 cut(s)	129, 1464
Cfr10I	RCCGGY	1 cut(s)	40
Cfr13I	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
CseI	GACGC	1 cut(s)	46
CsiI	ACCWGGT	1 cut(s)	1408
Csp6I	GTAC	4 cut(s)	1140, 1172, 1221, 1753
CviAII	CATG	7 cut(s)	326, 521, 956, 1390, 1465, 1546, 1697
CviQI	GTAC	4 cut(s)	1140, 1172, 1221, 1753
DdeI	CTNAG	7 cut(s)	108, 336, 474, 627, 897, 1150, 1626
DpnI	GATC	9 cut(s)	330, 453, 558, 618, 1444, 1587, 1600, 1707, 1938
DpnII	GATC	9 cut(s)	328, 451, 556, 616, 1442, 1585, 1598, 1705, 1936
DraI	TTTAAA	1 cut(s)	183
DrdI	GACNNNNNNGTC	1 cut(s)	25
DseDI	GACNNNNNNGTC	1 cut(s)	25
Eam1104I	CTCTTC	1 cut(s)	945
EarI	CTCTTC	1 cut(s)	945
Eco130I	CCWWGG	2 cut(s)	1228, 1970
Eco147I	AGGCCT	3 cut(s)	1090, 1213, 1975
Eco32I	GATATC	2 cut(s)	261, 749
Eco47I	GGWCC	3 cut(s)	1291, 1316, 1982
Eco57I	CTGAAG	2 cut(s)	402, 552
Eco72I	CACGTG	1 cut(s)	1538
Eco88I	CYCGRG	1 cut(s)	65
EcoO109I	RGGNCCY	1 cut(s)	1982
EcoRII	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
EcoRV	GATATC	2 cut(s)	261, 749
EcoT14I	CCWWGG	2 cut(s)	1228, 1970
EcoT22I	ATGCAT	1 cut(s)	1510
ErhI	CCWWGG	2 cut(s)	1228, 1970
FaeI	CATG	7 cut(s)	329, 524, 959, 1393, 1468, 1549, 1700
FatI	CATG	7 cut(s)	325, 520, 955, 1389, 1464, 1545, 1696
FauNDI	CATATG	1 cut(s)	790
FbaI	TGATCA	1 cut(s)	616
FblI	GTMKAC	2 cut(s)	377, 577
FspAI	RTGCGCAY	1 cut(s)	1463
FspBI	CTAG	4 cut(s)	332, 1092, 1352, 1703
FspI	TGCGCA	1 cut(s)	1463
GlaI	GCGC	2 cut(s)	128, 1463
GsaI	CCCAGC	1 cut(s)	1473
GsuI	CTGGAG	2 cut(s)	527, 1002
HaeIII	GGCC	7 cut(s)	705, 914, 1058, 1090, 1213, 1969, 1975
HapII	CCGG	1 cut(s)	41
HgaI	GACGC	1 cut(s)	46
HhaI	GCGC	2 cut(s)	129, 1464
Hin1I	GRCGYC	1 cut(s)	57
Hin1II	CATG	7 cut(s)	329, 524, 959, 1393, 1468, 1549, 1700
Hin6I	GCGC	2 cut(s)	127, 1462
HinP1I	GCGC	2 cut(s)	127, 1462
HincII	GTYRAC	2 cut(s)	9, 1202
HindII	GTYRAC	2 cut(s)	9, 1202
HindIII	AAGCTT	2 cut(s)	492, 1942
HinfI	GANTC	3 cut(s)	483, 649, 857
HpaI	GTTAAC	1 cut(s)	9
HpaII	CCGG	1 cut(s)	41
HphI	GGTGA	4 cut(s)	55, 527, 671, 1739
Hpy166II	GTNNAC	8 cut(s)	9, 378, 518, 578, 662, 713, 1202, 1387
Hpy188I	TCNGA	9 cut(s)	94, 265, 293, 421, 532, 729, 898, 1606, 1933
Hpy188III	TCNNGA	5 cut(s)	30, 326, 449, 1625, 1703
Hpy8I	GTNNAC	8 cut(s)	9, 378, 518, 578, 662, 713, 1202, 1387
HpyCH4III	ACNGT	7 cut(s)	159, 319, 719, 822, 1031, 1320, 1915
HpyCH4IV	ACGT	4 cut(s)	117, 1198, 1383, 1537
HpyF3I	CTNAG	7 cut(s)	108, 336, 474, 627, 897, 1150, 1626
HpySE526I	ACGT	4 cut(s)	117, 1198, 1383, 1537
Hsp92I	GRCGYC	1 cut(s)	57
Hsp92II	CATG	7 cut(s)	329, 524, 959, 1393, 1468, 1549, 1700
HspAI	GCGC	2 cut(s)	127, 1462
Ksp22I	TGATCA	1 cut(s)	616
KspAI	GTTAAC	1 cut(s)	9
Kzo9I	GATC	9 cut(s)	328, 451, 556, 616, 1442, 1585, 1598, 1705, 1936
LguI	GCTCTTC	1 cut(s)	945
LmnI	GCTCC	4 cut(s)	137, 797, 1189, 1561
LweI	GCATC	2 cut(s)	94, 1517
MabI	ACCWGGT	1 cut(s)	1408
MaeI	CTAG	4 cut(s)	332, 1092, 1352, 1703
MaeII	ACGT	4 cut(s)	117, 1198, 1383, 1537
MaeIII	GTNAC	1 cut(s)	1025
MalI	GATC	9 cut(s)	330, 453, 558, 618, 1444, 1587, 1600, 1707, 1938
MboI	GATC	9 cut(s)	328, 451, 556, 616, 1442, 1585, 1598, 1705, 1936
MflI	RGATCY	3 cut(s)	556, 1442, 1705
MhlI	GDGCHC	2 cut(s)	715, 1273
MlyI	GAGTC	2 cut(s)	492, 643
MmeI	TCCRAC	3 cut(s)	534, 1211, 1294
Mph1103I	ATGCAT	1 cut(s)	1510
MroXI	GAANNNNTTC	1 cut(s)	1530
MslI	CAYNNNNRTG	1 cut(s)	41
MspA1I	CMGCKG	2 cut(s)	194, 977
MspCI	CTTAAG	2 cut(s)	686, 988
MspI	CCGG	1 cut(s)	41
MspR9I	CCNGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
Mva1269I	GAATGC	4 cut(s)	236, 589, 736, 1574
MvaI	CCWGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
MvnI	CGCG	1 cut(s)	127
NdeI	CATATG	1 cut(s)	790
NdeII	GATC	9 cut(s)	328, 451, 556, 616, 1442, 1585, 1598, 1705, 1936
NlaIII	CATG	7 cut(s)	329, 524, 959, 1393, 1468, 1549, 1700
NlaIV	GGNNCC	3 cut(s)	558, 1557, 1983
NmuCI	GTSAC	1 cut(s)	1025
NsbI	TGCGCA	1 cut(s)	1463
NsiI	ATGCAT	1 cut(s)	1510
NspI	RCATGY	4 cut(s)	524, 959, 1393, 1700
OliI	CACNNNNGTG	1 cut(s)	41
PaeI	GCATGC	1 cut(s)	1700
PaeR7I	CTCGAG	1 cut(s)	65
PagI	TCATGA	1 cut(s)	325
PceI	AGGCCT	3 cut(s)	1090, 1213, 1975
PciI	ACATGT	1 cut(s)	520
PciSI	GCTCTTC	1 cut(s)	945
PcsI	WCGNNNNNNNCGW	1 cut(s)	26
PctI	GAATGC	4 cut(s)	236, 589, 736, 1574
PdmI	GAANNNNTTC	1 cut(s)	1530
PfeI	GAWTC	1 cut(s)	857
PflMI	CCANNNNNTGG	1 cut(s)	1489
PfoI	TCCNGGA	2 cut(s)	1293, 1809
PleI	GAGTC	2 cut(s)	491, 643
PmaCI	CACGTG	1 cut(s)	1538
PmlI	CACGTG	1 cut(s)	1538
PpsI	GAGTC	2 cut(s)	491, 643
Ppu21I	YACGTR	2 cut(s)	1384, 1538
PpuMI	RGGWCCY	1 cut(s)	1982
PscI	ACATGT	1 cut(s)	520
PshBI	ATTAAT	1 cut(s)	2027
Psp5II	RGGWCCY	1 cut(s)	1982
Psp6I	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
PspCI	CACGTG	1 cut(s)	1538
PspFI	CCCAGC	1 cut(s)	1469
PspGI	CCWGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
PspN4I	GGNNCC	3 cut(s)	558, 1557, 1983
PspPI	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
PspPPI	RGGWCCY	1 cut(s)	1982
PspXI	VCTCGAGB	1 cut(s)	65
PstI	CTGCAG	1 cut(s)	1003
PstNI	CAGNNNCTG	3 cut(s)	977, 980, 1913
PsuI	RGATCY	3 cut(s)	556, 1442, 1705
PvuII	CAGCTG	2 cut(s)	194, 977
RsaI	GTAC	4 cut(s)	1141, 1173, 1222, 1754
RsaNI	GTAC	4 cut(s)	1140, 1172, 1221, 1753
RseI	CAYNNNNRTG	1 cut(s)	41
SapI	GCTCTTC	1 cut(s)	945
Sau3AI	GATC	9 cut(s)	328, 451, 556, 616, 1442, 1585, 1598, 1705, 1936
Sau96I	GGNCC	7 cut(s)	704, 912, 1057, 1291, 1316, 1967, 1982
ScaI	AGTACT	1 cut(s)	1141
SchI	GAGTC	2 cut(s)	492, 643
ScrFI	CCNGG	6 cut(s)	506, 1206, 1295, 1410, 1763, 1811
SduI	GDGCHC	2 cut(s)	715, 1273
SexAI	ACCWGGT	1 cut(s)	1408
SfaNI	GCATC	2 cut(s)	94, 1517
SfcI	CTRYAG	2 cut(s)	578, 999
Sfr274I	CTCGAG	1 cut(s)	65
SgrAI	CRCCGGYG	1 cut(s)	40
SinI	GGWCC	3 cut(s)	1291, 1316, 1982
SlaI	CTCGAG	1 cut(s)	65
SmiMI	CAYNNNNRTG	1 cut(s)	41
SmlI	CTYRAG	4 cut(s)	65, 686, 843, 988
SmoI	CTYRAG	4 cut(s)	65, 686, 843, 988
SphI	GCATGC	1 cut(s)	1700
SseBI	AGGCCT	3 cut(s)	1090, 1213, 1975
SsiI	CCGC	2 cut(s)	197, 1850
SspI	AATATT	1 cut(s)	1806
SspMI	CTAG	4 cut(s)	332, 1092, 1352, 1703
StuI	AGGCCT	3 cut(s)	1090, 1213, 1975
StyD4I	CCNGG	6 cut(s)	504, 1204, 1293, 1408, 1761, 1809
StyI	CCWWGG	2 cut(s)	1228, 1970
TaaI	ACNGT	7 cut(s)	159, 319, 719, 822, 1031, 1320, 1915
TaiI	ACGT	4 cut(s)	120, 1201, 1386, 1540
TaqI	TCGA	5 cut(s)	29, 66, 102, 486, 647
TaqII	GACCGA	1 cut(s)	15
TatI	WGTACW	3 cut(s)	1139, 1220, 1752
TauI	GCSGC	1 cut(s)	1853
TfiI	GAWTC	1 cut(s)	857
TscAI	CASTG	3 cut(s)	372, 859, 1034
TseFI	GTSAC	1 cut(s)	1025
Tsp45I	GTSAC	1 cut(s)	1025
TspGWI	ACGGA	1 cut(s)	656
TspRI	CASTG	3 cut(s)	372, 859, 1034
Van91I	CCANNNNNTGG	1 cut(s)	1489
Vha464I	CTTAAG	2 cut(s)	686, 988
VneI	GTGCAC	1 cut(s)	711
VpaK11BI	GGWCC	3 cut(s)	1291, 1316, 1982
VspI	ATTAAT	1 cut(s)	2027
XapI	RAATTY	2 cut(s)	443, 1781
XbaI	TCTAGA	1 cut(s)	1702
XceI	RCATGY	4 cut(s)	524, 959, 1393, 1700
XhoI	CTCGAG	1 cut(s)	65
XmiI	GTMKAC	2 cut(s)	377, 577
XmnI	GAANNNNTTC	1 cut(s)	1530
XspI	CTAG	4 cut(s)	332, 1092, 1352, 1703
ZrmI	AGTACT	1 cut(s)	1141
Zsp2I	ATGCAT	1 cut(s)	1510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.