MD17G1187800.v1.1

VHS domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
22446048 .. 22450673
4626 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1187800.v1.1.491

Sequence Viewer

Length: 2148 bp
ATGGATTCGAGTCGAAGAGCTGTGGAGTCGTACAGGAGGTCCCGGATGATCGATGCGGTGACTTTCGACGAAGACAAGGTCGCACCCGTTTACAAATTGGAAGAGATTTGCCAGCTTCTGCGATCCTCGCATGTCAGTATTGTCAAGGAGATGTCTGAGTTTGTATTTAAGCGTTTGGACCATAAAAGTCCAATTGTTAAGCAGAAGGCTCTTAGATTAATAAAGTATGCAGTGGGAAAGTCTGGTGTGGAGTTCAGGAGGGAAATGCAAAGAAATTCAGTGGCAGTGCGCCAACTATTTCACTATAAGGGACACCCAGATCCTTTGAAAGGAGATGCACTTAATAAGGCTGTGCGGGATACTGCTCATGAGGCTATTTCTGCTATCTTTCAAGAGGAAAGTAATGCACCACCTGCAGATGATCTTAACAGAAGAATACAAGGTTTTGGGAATACGAACATCGAGATGTCATCAGATGAAAAAAGGTCTTTCATTAGTGAGGTTGTTGGTCTTGGAAGTGCATCTATCAAGCAGGGACTTAGTAATTTTACCCATAGTCACTCTTTTAAAAAGAATGACAATGGAAATTACAAGAGTCCAAATCTTCATAGATCGTTGACCATAGAAAGCGAGCAGGTTGATAGATATGAACCTGCTCAATATCGCAATGAGGCTCAAAATAGTTTTGGGTCATCAAAAAATGTGGCTAGTGGACCATGGAATGAGGATTCTAGGGTAACCAAAACTGAAATAACCAATGGAGATTCCAGTTCAAATTACAGAGAGAGTAAAACCCGTGAGGAGAGGTTGTTGGAGACCATTGTGACGTCAGGTGGTGTACGTTTACAACCCACTCGAGATGCCATTCTGATTTTCCTTACTGAGGCAAAGAAGTTGGATGCTGTAGCTTTGAGTCATGCCCTGGATTTAAAACTACAATCTCCATTGTGGCAGGCAAGCTCATTATACTTAAGTGTACGCATGAAAGCTATTTGTGTTCTTGAATCAATTTTGAGGAGAAAGGATGATGAGCATTTTGCAATCATAGAATCATATTTTATTGACAACAAAGATCTTGTAGTGAGATGCTCTGACTCTCCCCAGTCTTCTTTGAGGGAAAGGGCTAACAAGGTTTTGAGCCTCTTGGGTGGAGAACAGACAGGCAATGTGGCAAGTAATTCAGAACAGCCTATGAAGGCTCAGACTGCTACTTTTGTTCAGATGCCTGACCTTATAGACACCGGTGATCTAGATGATTACGATGTGACCAATGCTGCAACTGAGAACCCAAGTGATCAAGTCATCACAAACTTAACCGCACCATCACCAGCACCCCAACTAATTGATGATTTATTTGGAGATGGCCCAGGGAATGTCGTAAGCACCAGTGAACTGGAAAATGACGATGACCCTTTTGCAGATGTATCGTTCCACACTAATGACAGTAAAGAACAAGCAGATGATCTCTTCTCTGGGCTTACCGTTGATAATAAACGAGATCCTCATGAGAACTCCATAGCAGAAAAGAAAAGTGGACCTGAAATGTTTGACATTTTTGGGCCCGATTCTGAACTTCCGCAGGAGCAGGATCATAAACATGATTTAAACAATTTAATGGGTGGCTTATCCATTGATAAAAATGTCTCAAAGATGGAGCAGAAAAGAACCCCTCCTGGACAACTTTCTGAACTTCTATCGGATTCAGCTAGTCATCCCAGCCATCAGGCATCCGGCAATGCTTGGAGTGGCATTCTTAATTCTCAAACAGCATTGCCGAATGGAAATGCAGTGTTTCCTCCTGGTGCTATGCCTTACAATATACCTCCCGGAATTATGTTCAATCCAGCCTTTCCTTCTCAGCCAATAAATTATGGTGCCATGGGAAATCTCCTTGCTCAGCAGCAATTCCTAGCGACAATGTCTGGCTTTCAACACTTCGGAAACTTCAATTCGCAAAATATGAATTTAAGTAACGTTGCTGGAACAAATGGAGGATATGCTTCAGCACTTCCTGATATTTTCCATGCAAATCAACCAAATCCAGCTCCTAGTTCAGTGGTGAACAGTTCAAAGAAAGAGGATACTAAAGCATTTGATTTTATCTCGGACCATATTGCTGCAGCTCGTGATCCAAAGAGGGTAGTTTAA

Protein Analysis

716

Amino Acids

78.86

Weight (kDa)

5.43

Isoelectric Point (pI)

52.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 421
AatII GACGTC 1 cut(s) 830
Acc36I ACCTGC 3 cut(s) 421, 625, 661
AccB1I GGYRCC 1 cut(s) 1874
AciI CCGC 4 cut(s) 56, 355, 1317, 1577
AclI AACGTT 1 cut(s) 1974
AclWI GGATC 5 cut(s) 117, 314, 1493, 1596, 2123
AcsI RAATTY 2 cut(s) 274, 1963
AcuI CTGAAG 1 cut(s) 1986
AcyI GRCGYC 1 cut(s) 827
AfaI GTAC 3 cut(s) 32, 840, 978
AfiI CCNNNNNNNGG 2 cut(s) 329, 883
AflII CTTAAG 1 cut(s) 970
AgeI ACCGGT 1 cut(s) 1241
AgsI TTSAA 8 cut(s) 328, 392, 774, 1004, 1840, 1931, 1948, 2070
AjnI CCWGG 4 cut(s) 921, 1366, 1672, 1798
AluBI AGCT 8 cut(s) 20, 115, 908, 960, 989, 1706, 2045, 2123
AluI AGCT 8 cut(s) 20, 115, 908, 960, 989, 1706, 2045, 2123
Alw26I GTCTC 2 cut(s) 809, 1648
AlwI GGATC 5 cut(s) 117, 314, 1493, 1596, 2123
AlwNI CAGNNNCTG 1 cut(s) 118
Ama87I CYCGRG 1 cut(s) 855
AoxI GGCC 2 cut(s) 1363, 1559
ApaI GGGCCC 1 cut(s) 1563
ApeKI GCWGC 4 cut(s) 1274, 1900, 2117, 2120
ApoI RAATTY 2 cut(s) 274, 1963
ArsI GACNNNNNNTTYG 2 cut(s) 63, 95
AseI ATTAAT 1 cut(s) 218
AsiGI ACCGGT 1 cut(s) 1241
AspLEI GCGC 1 cut(s) 291
AspS9I GGNCC 8 cut(s) 39, 178, 713, 1364, 1535, 1559, 1560, 2107
AsuC2I CCSGG 2 cut(s) 43, 1827
AsuHPI GGTGA 4 cut(s) 70, 1256, 1317, 2071
AvaI CYCGRG 1 cut(s) 855
AvaII GGWCC 5 cut(s) 39, 178, 713, 1535, 2107
BaeGI GKGCMC 1 cut(s) 1563
BanI GGYRCC 1 cut(s) 1874
BanII GRGCYC 1 cut(s) 1563
BauI CACGAG 1 cut(s) 2124
BbsI GAAGAC 2 cut(s) 78, 1098
BbvI GCAGC 4 cut(s) 1261, 1912, 2104, 2132
BccI CCATC 4 cut(s) 1330, 1355, 1645, 1728
BcgI CGANNNNNNTGC 2 cut(s) 1407, 1441
BciT130I CCWGG 4 cut(s) 923, 1368, 1674, 1800
BciVI GTATCC 2 cut(s) 352, 2074
BclI TGATCA 1 cut(s) 1294
BcnI CCSGG 2 cut(s) 43, 1827
BcoDI GTCTC 2 cut(s) 809, 1648
BfaI CTAG 6 cut(s) 708, 732, 1250, 1707, 1910, 2049
BfmI CTRYAG 3 cut(s) 414, 903, 2118
BfrI CTTAAG 1 cut(s) 970
BfuAI ACCTGC 3 cut(s) 421, 625, 661
BfuI GTATCC 2 cut(s) 352, 2074
BglII AGATCT 1 cut(s) 1072
BisI GCNGC 4 cut(s) 1275, 1901, 2118, 2121
BlpI GCTNAGC 1 cut(s) 1896
BlsI GCNGC 4 cut(s) 1276, 1902, 2119, 2122
Bme1390I CCNGG 6 cut(s) 43, 923, 1368, 1674, 1800, 1827
Bme18I GGWCC 5 cut(s) 39, 178, 713, 1535, 2107
BmeT110I CYCGRG 1 cut(s) 855
BmgT120I GGNCC 8 cut(s) 39, 178, 713, 1364, 1535, 1559, 1560, 2107
BmiI GGNNCC 3 cut(s) 41, 1561, 1876
BmrFI CCNGG 6 cut(s) 43, 923, 1368, 1674, 1800, 1827
BmrI ACTGGG 1 cut(s) 1096
BmsI GCATC 8 cut(s) 43, 325, 530, 850, 889, 1076, 1212, 1736
BmuI ACTGGG 1 cut(s) 1096
BpiI GAAGAC 2 cut(s) 78, 1098
Bpu1102I GCTNAGC 1 cut(s) 1896
BpuMI CCSGG 2 cut(s) 43, 1827
Bsa29I ATCGAT 1 cut(s) 51
BsaHI GRCGYC 1 cut(s) 827
BsaI GGTCTC 1 cut(s) 809
BsaJI CCNNGG 5 cut(s) 716, 921, 1366, 1367, 1878
BsaWI WCCGGW 1 cut(s) 1241
BsaXI ACNNNNNCTCC 2 cut(s) 794, 824
Bsc4I CCNNNNNNNGG 2 cut(s) 329, 883
Bse118I RCCGGY 1 cut(s) 1241
Bse1I ACTGG 4 cut(s) 768, 1102, 1386, 1398
Bse3DI GCAATG 4 cut(s) 673, 1171, 1741, 1769
BseBI CCWGG 4 cut(s) 923, 1368, 1674, 1800
BseCI ATCGAT 1 cut(s) 51
BseDI CCNNGG 5 cut(s) 716, 921, 1366, 1367, 1878
BseGI GGATG 5 cut(s) 51, 904, 1030, 1711, 1727
BseLI CCNNNNNNNGG 2 cut(s) 329, 883
BseMI GCAATG 4 cut(s) 673, 1171, 1741, 1769
BseMII CTCAG 6 cut(s) 147, 873, 1214, 1272, 1871, 1910
BseNI ACTGG 4 cut(s) 768, 1102, 1386, 1398
BseRI GAGGAG 2 cut(s) 815, 1030
BseSI GKGCMC 1 cut(s) 1563
BseXI GCAGC 4 cut(s) 1261, 1912, 2104, 2132
BseYI CCCAGC 1 cut(s) 1715
BshFI GGCC 2 cut(s) 1365, 1561
BshNI GGYRCC 1 cut(s) 1874
BshTI ACCGGT 1 cut(s) 1241
BshVI ATCGAT 1 cut(s) 51
BsiHKCI CYCGRG 1 cut(s) 855
BsiSI CCGG 4 cut(s) 43, 1242, 1731, 1827
BslFI GGGAC 3 cut(s) 25, 324, 549
BslI CCNNNNNNNGG 2 cut(s) 329, 883
BsmAI GTCTC 2 cut(s) 809, 1648
BsmFI GGGAC 3 cut(s) 25, 324, 549
BsmI GAATGC 1 cut(s) 1749
BsnI GGCC 2 cut(s) 1365, 1561
Bso31I GGTCTC 1 cut(s) 809
BsoBI CYCGRG 1 cut(s) 855
Bsp120I GGGCCC 1 cut(s) 1559
Bsp1286I GDGCHC 1 cut(s) 1563
Bsp1720I GCTNAGC 1 cut(s) 1896
Bsp19I CCATGG 2 cut(s) 716, 1878
BspACI CCGC 4 cut(s) 56, 355, 1317, 1577
BspANI GGCC 2 cut(s) 1365, 1561
BspCNI CTCAG 6 cut(s) 148, 874, 1213, 1273, 1870, 1909
BspDI ATCGAT 1 cut(s) 51
BspHI TCATGA 2 cut(s) 367, 1504
BspLI GGNNCC 3 cut(s) 41, 1561, 1876
BspMAI CTGCAG 2 cut(s) 418, 2122
BspMI ACCTGC 3 cut(s) 421, 625, 661
BspPI GGATC 5 cut(s) 117, 314, 1493, 1596, 2123
BspQI GCTCTTC 1 cut(s) 10
BspT107I GGYRCC 1 cut(s) 1874
BspTI CTTAAG 1 cut(s) 970
BspTNI GGTCTC 1 cut(s) 809
BsrDI GCAATG 4 cut(s) 673, 1171, 1741, 1769
BsrFI RCCGGY 1 cut(s) 1241
BsrI ACTGG 4 cut(s) 768, 1102, 1386, 1398
BssAI RCCGGY 1 cut(s) 1241
BssECI CCNNGG 5 cut(s) 716, 921, 1366, 1367, 1878
BssNI GRCGYC 1 cut(s) 827
BssSI CACGAG 1 cut(s) 2124
BssT1I CCWWGG 2 cut(s) 716, 1878
Bst2BI CACGAG 1 cut(s) 2124
Bst2UI CCWGG 4 cut(s) 923, 1368, 1674, 1800
Bst4CI ACNGT 3 cut(s) 1445, 1483, 2066
Bst6I CTCTTC 3 cut(s) 10, 96, 1472
BstACI GRCGYC 1 cut(s) 827
BstAFI CTTAAG 1 cut(s) 970
BstAPI GCANNNNNTGC 1 cut(s) 413
BstC8I GCNNGC 4 cut(s) 113, 632, 954, 958
BstDEI CTNAG 8 cut(s) 156, 212, 539, 882, 1200, 1281, 1857, 1896
BstDSI CCRYGG 2 cut(s) 716, 1878
BstEII GGTNACC 1 cut(s) 736
BstENI CCTNNNNNAGG 2 cut(s) 327, 881
BstF5I GGATG 5 cut(s) 51, 904, 1030, 1711, 1727
BstHHI GCGC 1 cut(s) 291
BstMAI GTCTC 2 cut(s) 809, 1648
BstMWI GCNNNNNNNGC 5 cut(s) 127, 371, 380, 413, 1205
BstNI CCWGG 4 cut(s) 923, 1368, 1674, 1800
BstNSI RCATGY 1 cut(s) 134
BstPI GGTNACC 1 cut(s) 736
BstSCI CCNGG 6 cut(s) 41, 921, 1366, 1672, 1798, 1825
BstSFI CTRYAG 3 cut(s) 414, 903, 2118
BstSLI GKGCMC 1 cut(s) 1563
BstV1I GCAGC 4 cut(s) 1261, 1912, 2104, 2132
BstV2I GAAGAC 2 cut(s) 78, 1098
BstX2I RGATCY 3 cut(s) 319, 1072, 1498
BstXI CCANNNNNNTGG 1 cut(s) 1393
BstYI RGATCY 3 cut(s) 319, 1072, 1498
Bsu15I ATCGAT 1 cut(s) 51
BsuI GTATCC 2 cut(s) 352, 2074
BsuRI GGCC 2 cut(s) 1365, 1561
BsuTUI ATCGAT 1 cut(s) 51
BtgI CCRYGG 2 cut(s) 716, 1878
BtsCI GGATG 5 cut(s) 51, 904, 1030, 1711, 1727
BtsI GCAGTG 3 cut(s) 237, 291, 1794
BtsIMutI CAGTG 6 cut(s) 237, 285, 291, 1393, 1794, 2061
BveI ACCTGC 3 cut(s) 421, 625, 661
Cac8I GCNNGC 4 cut(s) 113, 632, 954, 958
CaiI CAGNNNCTG 1 cut(s) 118
CciI TCATGA 2 cut(s) 367, 1504
CfoI GCGC 1 cut(s) 291
Cfr10I RCCGGY 1 cut(s) 1241
Cfr13I GGNCC 8 cut(s) 39, 178, 713, 1364, 1535, 1559, 1560, 2107
ClaI ATCGAT 1 cut(s) 51
Csp6I GTAC 3 cut(s) 31, 839, 977
CspAI ACCGGT 1 cut(s) 1241
CspCI CAANNNNNGTGG 2 cut(s) 684, 719
CviAII CATG 9 cut(s) 131, 368, 717, 917, 982, 1505, 1598, 1879, 2024
CviQI GTAC 3 cut(s) 31, 839, 977
DdeI CTNAG 8 cut(s) 156, 212, 539, 882, 1200, 1281, 1857, 1896
DraI TTTAAA 3 cut(s) 568, 930, 1605
Eam1104I CTCTTC 3 cut(s) 10, 96, 1472
EarI CTCTTC 3 cut(s) 10, 96, 1472
Eco130I CCWWGG 2 cut(s) 716, 1878
Eco24I GRGCYC 1 cut(s) 1563
Eco31I GGTCTC 1 cut(s) 809
Eco47I GGWCC 5 cut(s) 39, 178, 713, 1535, 2107
Eco57I CTGAAG 1 cut(s) 1986
Eco88I CYCGRG 1 cut(s) 855
Eco91I GGTNACC 1 cut(s) 736
EcoNI CCTNNNNNAGG 2 cut(s) 327, 881
EcoO109I RGGNCCY 1 cut(s) 39
EcoO65I GGTNACC 1 cut(s) 736
EcoRII CCWGG 4 cut(s) 921, 1366, 1672, 1798
EcoT14I CCWWGG 2 cut(s) 716, 1878
EcoT38I GRGCYC 1 cut(s) 1563
ErhI CCWWGG 2 cut(s) 716, 1878
FaeI CATG 9 cut(s) 134, 371, 720, 920, 985, 1508, 1601, 1882, 2027
FaqI GGGAC 3 cut(s) 25, 324, 549
FatI CATG 9 cut(s) 130, 367, 716, 916, 981, 1504, 1597, 1878, 2023
FauI CCCGC 1 cut(s) 348
FbaI TGATCA 1 cut(s) 1294
Fnu4HI GCNGC 4 cut(s) 1275, 1901, 2118, 2121
FokI GGATG 5 cut(s) 58, 911, 1037, 1698, 1714
FriOI GRGCYC 1 cut(s) 1563
Fsp4HI GCNGC 4 cut(s) 1275, 1901, 2118, 2121
FspBI CTAG 6 cut(s) 708, 732, 1250, 1707, 1910, 2049
GlaI GCGC 1 cut(s) 290
GluI GCNGC 4 cut(s) 1275, 1901, 2118, 2121
GsaI CCCAGC 1 cut(s) 1719
HaeIII GGCC 2 cut(s) 1365, 1561
HapII CCGG 4 cut(s) 43, 1242, 1731, 1827
HhaI GCGC 1 cut(s) 291
Hin1I GRCGYC 1 cut(s) 827
Hin1II CATG 9 cut(s) 134, 371, 720, 920, 985, 1508, 1601, 1882, 2027
Hin6I GCGC 1 cut(s) 289
HinP1I GCGC 1 cut(s) 289
HincII GTYRAC 1 cut(s) 618
HindII GTYRAC 1 cut(s) 618
HpaII CCGG 4 cut(s) 43, 1242, 1731, 1827
HphI GGTGA 4 cut(s) 70, 1256, 1317, 2071
Hpy166II GTNNAC 9 cut(s) 91, 618, 713, 839, 845, 977, 1391, 1535, 2062
Hpy8I GTNNAC 9 cut(s) 91, 618, 713, 839, 845, 977, 1391, 1535, 2062
Hpy99I CGWCG 1 cut(s) 71
HpyAV CCTTC 3 cut(s) 199, 1189, 1863
HpyCH4III ACNGT 3 cut(s) 1445, 1483, 2066
HpyCH4IV ACGT 3 cut(s) 827, 841, 1974
HpyF10VI GCNNNNNNNGC 5 cut(s) 127, 371, 380, 413, 1205
HpyF3I CTNAG 8 cut(s) 156, 212, 539, 882, 1200, 1281, 1857, 1896
HpySE526I ACGT 3 cut(s) 827, 841, 1974
Hsp92I GRCGYC 1 cut(s) 827
Hsp92II CATG 9 cut(s) 134, 371, 720, 920, 985, 1508, 1601, 1882, 2027
HspAI GCGC 1 cut(s) 289
Ksp22I TGATCA 1 cut(s) 1294
LguI GCTCTTC 1 cut(s) 10
LmnI GCTCC 3 cut(s) 1582, 1654, 2050
Lsp1109I GCAGC 4 cut(s) 1261, 1912, 2104, 2132
LweI GCATC 8 cut(s) 43, 325, 530, 850, 889, 1076, 1212, 1736
MaeI CTAG 6 cut(s) 708, 732, 1250, 1707, 1910, 2049
MaeII ACGT 3 cut(s) 827, 841, 1974
MaeIII GTNAC 6 cut(s) 58, 557, 736, 823, 1264, 1970
MboII GAAGA 7 cut(s) 27, 83, 113, 444, 596, 1098, 1459
MfeI CAATTG 1 cut(s) 192
MflI RGATCY 3 cut(s) 319, 1072, 1498
MhlI GDGCHC 1 cut(s) 1563
MlyI GAGTC 5 cut(s) 19, 35, 604, 922, 1088
MmeI TCCRAC 2 cut(s) 792, 876
MslI CAYNNNNRTG 3 cut(s) 464, 1437, 1596
MspCI CTTAAG 1 cut(s) 970
MspI CCGG 4 cut(s) 43, 1242, 1731, 1827
MspR9I CCNGG 6 cut(s) 43, 923, 1368, 1674, 1800, 1827
MunI CAATTG 1 cut(s) 192
Mva1269I GAATGC 1 cut(s) 1749
MvaI CCWGG 4 cut(s) 923, 1368, 1674, 1800
MwoI GCNNNNNNNGC 5 cut(s) 127, 371, 380, 413, 1205
NciI CCSGG 2 cut(s) 43, 1827
NcoI CCATGG 2 cut(s) 716, 1878
NlaIII CATG 9 cut(s) 134, 371, 720, 920, 985, 1508, 1601, 1882, 2027
NlaIV GGNNCC 3 cut(s) 41, 1561, 1876
NmuCI GTSAC 4 cut(s) 58, 557, 823, 1264
NspI RCATGY 1 cut(s) 134
PaeR7I CTCGAG 1 cut(s) 855
PagI TCATGA 2 cut(s) 367, 1504
PaqCI CACCTGC 1 cut(s) 421
PasI CCCWGGG 1 cut(s) 1367
PciSI GCTCTTC 1 cut(s) 10
PctI GAATGC 1 cut(s) 1749
PfeI GAWTC 7 cut(s) 5, 728, 764, 1004, 1049, 1565, 1700
PflFI GACNNNGTC 2 cut(s) 77, 1918
PfoI TCCNGGA 3 cut(s) 41, 1672, 1825
PinAI ACCGGT 1 cut(s) 1241
PkrI GCNGC 4 cut(s) 1276, 1902, 2119, 2122
PleI GAGTC 5 cut(s) 18, 34, 603, 921, 1088
PpsI GAGTC 5 cut(s) 18, 34, 603, 921, 1088
PpuMI RGGWCCY 1 cut(s) 39
PshBI ATTAAT 1 cut(s) 218
Psp1406I AACGTT 1 cut(s) 1974
Psp5II RGGWCCY 1 cut(s) 39
Psp6I CCWGG 4 cut(s) 921, 1366, 1672, 1798
PspEI GGTNACC 1 cut(s) 736
PspFI CCCAGC 1 cut(s) 1715
PspGI CCWGG 4 cut(s) 921, 1366, 1672, 1798
PspN4I GGNNCC 3 cut(s) 41, 1561, 1876
PspOMI GGGCCC 1 cut(s) 1559
PspPI GGNCC 8 cut(s) 39, 178, 713, 1364, 1535, 1559, 1560, 2107
PspPPI RGGWCCY 1 cut(s) 39
PstI CTGCAG 2 cut(s) 418, 2122
PstNI CAGNNNCTG 1 cut(s) 118
PsuI RGATCY 3 cut(s) 319, 1072, 1498
PsyI GACNNNGTC 2 cut(s) 77, 1918
RsaI GTAC 3 cut(s) 32, 840, 978
RsaNI GTAC 3 cut(s) 31, 839, 977
RseI CAYNNNNRTG 3 cut(s) 464, 1437, 1596
SapI GCTCTTC 1 cut(s) 10
SatI GCNGC 4 cut(s) 1275, 1901, 2118, 2121
Sau96I GGNCC 8 cut(s) 39, 178, 713, 1364, 1535, 1559, 1560, 2107
SchI GAGTC 5 cut(s) 19, 35, 604, 922, 1088
ScrFI CCNGG 6 cut(s) 43, 923, 1368, 1674, 1800, 1827
SduI GDGCHC 1 cut(s) 1563
SfaNI GCATC 8 cut(s) 43, 325, 530, 850, 889, 1076, 1212, 1736
SfcI CTRYAG 3 cut(s) 414, 903, 2118
Sfr274I CTCGAG 1 cut(s) 855
SgrAI CRCCGGYG 1 cut(s) 1241
SinI GGWCC 5 cut(s) 39, 178, 713, 1535, 2107
SlaI CTCGAG 1 cut(s) 855
SmiMI CAYNNNNRTG 3 cut(s) 464, 1437, 1596
SmlI CTYRAG 2 cut(s) 855, 970
SmoI CTYRAG 2 cut(s) 855, 970
SsiI CCGC 4 cut(s) 56, 355, 1317, 1577
SspMI CTAG 6 cut(s) 708, 732, 1250, 1707, 1910, 2049
StyD4I CCNGG 6 cut(s) 41, 921, 1366, 1672, 1798, 1825
StyI CCWWGG 2 cut(s) 716, 1878
TaaI ACNGT 3 cut(s) 1445, 1483, 2066
TaiI ACGT 3 cut(s) 830, 844, 1977
TaqI TCGA 6 cut(s) 8, 13, 51, 66, 462, 856
TfiI GAWTC 7 cut(s) 5, 728, 764, 1004, 1049, 1565, 1700
TscAI CASTG 6 cut(s) 237, 285, 291, 1393, 1794, 2061
TseFI GTSAC 4 cut(s) 58, 557, 823, 1264
TseI GCWGC 4 cut(s) 1274, 1900, 2117, 2120
Tsp45I GTSAC 4 cut(s) 58, 557, 823, 1264
TspDTI ATGAA 7 cut(s) 481, 492, 596, 663, 998, 1208, 1976
TspRI CASTG 6 cut(s) 237, 285, 291, 1393, 1794, 2061
Tth111I GACNNNGTC 2 cut(s) 77, 1918
Vha464I CTTAAG 1 cut(s) 970
VpaK11BI GGWCC 5 cut(s) 39, 178, 713, 1535, 2107
VspI ATTAAT 1 cut(s) 218
XagI CCTNNNNNAGG 2 cut(s) 327, 881
XapI RAATTY 2 cut(s) 274, 1963
XbaI TCTAGA 1 cut(s) 1249
XceI RCATGY 1 cut(s) 134
XhoI CTCGAG 1 cut(s) 855
XspI CTAG 6 cut(s) 708, 732, 1250, 1707, 1910, 2049
ZraI GACGTC 1 cut(s) 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.