VHS domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16270 AT3G16270 AT3G16270 |
| fragaria_vesca | FvH4_6g32000 |
| malus_domestica | MD09G1207100.v1.1 MD17G1187800.v1.1 |
| prunus_persica | Prupe.3G063200_v2.0.a1 Prupe.3G063200_v2.0.a1 |
| pyrus_communis | pycom09g12350 pycom17g19670 |
| rosa_chinensis | RchiOBHm_Chr2g0139591 RchiOBHm_Chr2g0139601 |
| rosa_laevigata | RLG00000019821 |
| rosa_multiflora | Rmu_sc0003427.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00105370 |
| rosa_rugosa | Rorug02G0358500 Rorug02G0358600 Rorug02G0358600 |
| rosa_samantha | Rh2AG408400 Rh2BG419000 Rh2CG394400 Rh2DG428100 |
| rosa_wichuraiana | Rw2G033520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 421 |
| AatII | GACGTC | 1 cut(s) | 830 |
| Acc36I | ACCTGC | 3 cut(s) | 421, 625, 661 |
| AccB1I | GGYRCC | 1 cut(s) | 1874 |
| AciI | CCGC | 4 cut(s) | 56, 355, 1317, 1577 |
| AclI | AACGTT | 1 cut(s) | 1974 |
| AclWI | GGATC | 5 cut(s) | 117, 314, 1493, 1596, 2123 |
| AcsI | RAATTY | 2 cut(s) | 274, 1963 |
| AcuI | CTGAAG | 1 cut(s) | 1986 |
| AcyI | GRCGYC | 1 cut(s) | 827 |
| AfaI | GTAC | 3 cut(s) | 32, 840, 978 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 329, 883 |
| AflII | CTTAAG | 1 cut(s) | 970 |
| AgeI | ACCGGT | 1 cut(s) | 1241 |
| AgsI | TTSAA | 8 cut(s) | 328, 392, 774, 1004, 1840, 1931, 1948, 2070 |
| AjnI | CCWGG | 4 cut(s) | 921, 1366, 1672, 1798 |
| AluBI | AGCT | 8 cut(s) | 20, 115, 908, 960, 989, 1706, 2045, 2123 |
| AluI | AGCT | 8 cut(s) | 20, 115, 908, 960, 989, 1706, 2045, 2123 |
| Alw26I | GTCTC | 2 cut(s) | 809, 1648 |
| AlwI | GGATC | 5 cut(s) | 117, 314, 1493, 1596, 2123 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 118 |
| Ama87I | CYCGRG | 1 cut(s) | 855 |
| AoxI | GGCC | 2 cut(s) | 1363, 1559 |
| ApaI | GGGCCC | 1 cut(s) | 1563 |
| ApeKI | GCWGC | 4 cut(s) | 1274, 1900, 2117, 2120 |
| ApoI | RAATTY | 2 cut(s) | 274, 1963 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 63, 95 |
| AseI | ATTAAT | 1 cut(s) | 218 |
| AsiGI | ACCGGT | 1 cut(s) | 1241 |
| AspLEI | GCGC | 1 cut(s) | 291 |
| AspS9I | GGNCC | 8 cut(s) | 39, 178, 713, 1364, 1535, 1559, 1560, 2107 |
| AsuC2I | CCSGG | 2 cut(s) | 43, 1827 |
| AsuHPI | GGTGA | 4 cut(s) | 70, 1256, 1317, 2071 |
| AvaI | CYCGRG | 1 cut(s) | 855 |
| AvaII | GGWCC | 5 cut(s) | 39, 178, 713, 1535, 2107 |
| BaeGI | GKGCMC | 1 cut(s) | 1563 |
| BanI | GGYRCC | 1 cut(s) | 1874 |
| BanII | GRGCYC | 1 cut(s) | 1563 |
| BauI | CACGAG | 1 cut(s) | 2124 |
| BbsI | GAAGAC | 2 cut(s) | 78, 1098 |
| BbvI | GCAGC | 4 cut(s) | 1261, 1912, 2104, 2132 |
| BccI | CCATC | 4 cut(s) | 1330, 1355, 1645, 1728 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1407, 1441 |
| BciT130I | CCWGG | 4 cut(s) | 923, 1368, 1674, 1800 |
| BciVI | GTATCC | 2 cut(s) | 352, 2074 |
| BclI | TGATCA | 1 cut(s) | 1294 |
| BcnI | CCSGG | 2 cut(s) | 43, 1827 |
| BcoDI | GTCTC | 2 cut(s) | 809, 1648 |
| BfaI | CTAG | 6 cut(s) | 708, 732, 1250, 1707, 1910, 2049 |
| BfmI | CTRYAG | 3 cut(s) | 414, 903, 2118 |
| BfrI | CTTAAG | 1 cut(s) | 970 |
| BfuAI | ACCTGC | 3 cut(s) | 421, 625, 661 |
| BfuI | GTATCC | 2 cut(s) | 352, 2074 |
| BglII | AGATCT | 1 cut(s) | 1072 |
| BisI | GCNGC | 4 cut(s) | 1275, 1901, 2118, 2121 |
| BlpI | GCTNAGC | 1 cut(s) | 1896 |
| BlsI | GCNGC | 4 cut(s) | 1276, 1902, 2119, 2122 |
| Bme1390I | CCNGG | 6 cut(s) | 43, 923, 1368, 1674, 1800, 1827 |
| Bme18I | GGWCC | 5 cut(s) | 39, 178, 713, 1535, 2107 |
| BmeT110I | CYCGRG | 1 cut(s) | 855 |
| BmgT120I | GGNCC | 8 cut(s) | 39, 178, 713, 1364, 1535, 1559, 1560, 2107 |
| BmiI | GGNNCC | 3 cut(s) | 41, 1561, 1876 |
| BmrFI | CCNGG | 6 cut(s) | 43, 923, 1368, 1674, 1800, 1827 |
| BmrI | ACTGGG | 1 cut(s) | 1096 |
| BmsI | GCATC | 8 cut(s) | 43, 325, 530, 850, 889, 1076, 1212, 1736 |
| BmuI | ACTGGG | 1 cut(s) | 1096 |
| BpiI | GAAGAC | 2 cut(s) | 78, 1098 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1896 |
| BpuMI | CCSGG | 2 cut(s) | 43, 1827 |
| Bsa29I | ATCGAT | 1 cut(s) | 51 |
| BsaHI | GRCGYC | 1 cut(s) | 827 |
| BsaI | GGTCTC | 1 cut(s) | 809 |
| BsaJI | CCNNGG | 5 cut(s) | 716, 921, 1366, 1367, 1878 |
| BsaWI | WCCGGW | 1 cut(s) | 1241 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 794, 824 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 329, 883 |
| Bse118I | RCCGGY | 1 cut(s) | 1241 |
| Bse1I | ACTGG | 4 cut(s) | 768, 1102, 1386, 1398 |
| Bse3DI | GCAATG | 4 cut(s) | 673, 1171, 1741, 1769 |
| BseBI | CCWGG | 4 cut(s) | 923, 1368, 1674, 1800 |
| BseCI | ATCGAT | 1 cut(s) | 51 |
| BseDI | CCNNGG | 5 cut(s) | 716, 921, 1366, 1367, 1878 |
| BseGI | GGATG | 5 cut(s) | 51, 904, 1030, 1711, 1727 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 329, 883 |
| BseMI | GCAATG | 4 cut(s) | 673, 1171, 1741, 1769 |
| BseMII | CTCAG | 6 cut(s) | 147, 873, 1214, 1272, 1871, 1910 |
| BseNI | ACTGG | 4 cut(s) | 768, 1102, 1386, 1398 |
| BseRI | GAGGAG | 2 cut(s) | 815, 1030 |
| BseSI | GKGCMC | 1 cut(s) | 1563 |
| BseXI | GCAGC | 4 cut(s) | 1261, 1912, 2104, 2132 |
| BseYI | CCCAGC | 1 cut(s) | 1715 |
| BshFI | GGCC | 2 cut(s) | 1365, 1561 |
| BshNI | GGYRCC | 1 cut(s) | 1874 |
| BshTI | ACCGGT | 1 cut(s) | 1241 |
| BshVI | ATCGAT | 1 cut(s) | 51 |
| BsiHKCI | CYCGRG | 1 cut(s) | 855 |
| BsiSI | CCGG | 4 cut(s) | 43, 1242, 1731, 1827 |
| BslFI | GGGAC | 3 cut(s) | 25, 324, 549 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 329, 883 |
| BsmAI | GTCTC | 2 cut(s) | 809, 1648 |
| BsmFI | GGGAC | 3 cut(s) | 25, 324, 549 |
| BsmI | GAATGC | 1 cut(s) | 1749 |
| BsnI | GGCC | 2 cut(s) | 1365, 1561 |
| Bso31I | GGTCTC | 1 cut(s) | 809 |
| BsoBI | CYCGRG | 1 cut(s) | 855 |
| Bsp120I | GGGCCC | 1 cut(s) | 1559 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1563 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1896 |
| Bsp19I | CCATGG | 2 cut(s) | 716, 1878 |
| BspACI | CCGC | 4 cut(s) | 56, 355, 1317, 1577 |
| BspANI | GGCC | 2 cut(s) | 1365, 1561 |
| BspCNI | CTCAG | 6 cut(s) | 148, 874, 1213, 1273, 1870, 1909 |
| BspDI | ATCGAT | 1 cut(s) | 51 |
| BspHI | TCATGA | 2 cut(s) | 367, 1504 |
| BspLI | GGNNCC | 3 cut(s) | 41, 1561, 1876 |
| BspMAI | CTGCAG | 2 cut(s) | 418, 2122 |
| BspMI | ACCTGC | 3 cut(s) | 421, 625, 661 |
| BspPI | GGATC | 5 cut(s) | 117, 314, 1493, 1596, 2123 |
| BspQI | GCTCTTC | 1 cut(s) | 10 |
| BspT107I | GGYRCC | 1 cut(s) | 1874 |
| BspTI | CTTAAG | 1 cut(s) | 970 |
| BspTNI | GGTCTC | 1 cut(s) | 809 |
| BsrDI | GCAATG | 4 cut(s) | 673, 1171, 1741, 1769 |
| BsrFI | RCCGGY | 1 cut(s) | 1241 |
| BsrI | ACTGG | 4 cut(s) | 768, 1102, 1386, 1398 |
| BssAI | RCCGGY | 1 cut(s) | 1241 |
| BssECI | CCNNGG | 5 cut(s) | 716, 921, 1366, 1367, 1878 |
| BssNI | GRCGYC | 1 cut(s) | 827 |
| BssSI | CACGAG | 1 cut(s) | 2124 |
| BssT1I | CCWWGG | 2 cut(s) | 716, 1878 |
| Bst2BI | CACGAG | 1 cut(s) | 2124 |
| Bst2UI | CCWGG | 4 cut(s) | 923, 1368, 1674, 1800 |
| Bst4CI | ACNGT | 3 cut(s) | 1445, 1483, 2066 |
| Bst6I | CTCTTC | 3 cut(s) | 10, 96, 1472 |
| BstACI | GRCGYC | 1 cut(s) | 827 |
| BstAFI | CTTAAG | 1 cut(s) | 970 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 413 |
| BstC8I | GCNNGC | 4 cut(s) | 113, 632, 954, 958 |
| BstDEI | CTNAG | 8 cut(s) | 156, 212, 539, 882, 1200, 1281, 1857, 1896 |
| BstDSI | CCRYGG | 2 cut(s) | 716, 1878 |
| BstEII | GGTNACC | 1 cut(s) | 736 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 327, 881 |
| BstF5I | GGATG | 5 cut(s) | 51, 904, 1030, 1711, 1727 |
| BstHHI | GCGC | 1 cut(s) | 291 |
| BstMAI | GTCTC | 2 cut(s) | 809, 1648 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 127, 371, 380, 413, 1205 |
| BstNI | CCWGG | 4 cut(s) | 923, 1368, 1674, 1800 |
| BstNSI | RCATGY | 1 cut(s) | 134 |
| BstPI | GGTNACC | 1 cut(s) | 736 |
| BstSCI | CCNGG | 6 cut(s) | 41, 921, 1366, 1672, 1798, 1825 |
| BstSFI | CTRYAG | 3 cut(s) | 414, 903, 2118 |
| BstSLI | GKGCMC | 1 cut(s) | 1563 |
| BstV1I | GCAGC | 4 cut(s) | 1261, 1912, 2104, 2132 |
| BstV2I | GAAGAC | 2 cut(s) | 78, 1098 |
| BstX2I | RGATCY | 3 cut(s) | 319, 1072, 1498 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1393 |
| BstYI | RGATCY | 3 cut(s) | 319, 1072, 1498 |
| Bsu15I | ATCGAT | 1 cut(s) | 51 |
| BsuI | GTATCC | 2 cut(s) | 352, 2074 |
| BsuRI | GGCC | 2 cut(s) | 1365, 1561 |
| BsuTUI | ATCGAT | 1 cut(s) | 51 |
| BtgI | CCRYGG | 2 cut(s) | 716, 1878 |
| BtsCI | GGATG | 5 cut(s) | 51, 904, 1030, 1711, 1727 |
| BtsI | GCAGTG | 3 cut(s) | 237, 291, 1794 |
| BtsIMutI | CAGTG | 6 cut(s) | 237, 285, 291, 1393, 1794, 2061 |
| BveI | ACCTGC | 3 cut(s) | 421, 625, 661 |
| Cac8I | GCNNGC | 4 cut(s) | 113, 632, 954, 958 |
| CaiI | CAGNNNCTG | 1 cut(s) | 118 |
| CciI | TCATGA | 2 cut(s) | 367, 1504 |
| CfoI | GCGC | 1 cut(s) | 291 |
| Cfr10I | RCCGGY | 1 cut(s) | 1241 |
| Cfr13I | GGNCC | 8 cut(s) | 39, 178, 713, 1364, 1535, 1559, 1560, 2107 |
| ClaI | ATCGAT | 1 cut(s) | 51 |
| Csp6I | GTAC | 3 cut(s) | 31, 839, 977 |
| CspAI | ACCGGT | 1 cut(s) | 1241 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 684, 719 |
| CviAII | CATG | 9 cut(s) | 131, 368, 717, 917, 982, 1505, 1598, 1879, 2024 |
| CviQI | GTAC | 3 cut(s) | 31, 839, 977 |
| DdeI | CTNAG | 8 cut(s) | 156, 212, 539, 882, 1200, 1281, 1857, 1896 |
| DraI | TTTAAA | 3 cut(s) | 568, 930, 1605 |
| Eam1104I | CTCTTC | 3 cut(s) | 10, 96, 1472 |
| EarI | CTCTTC | 3 cut(s) | 10, 96, 1472 |
| Eco130I | CCWWGG | 2 cut(s) | 716, 1878 |
| Eco24I | GRGCYC | 1 cut(s) | 1563 |
| Eco31I | GGTCTC | 1 cut(s) | 809 |
| Eco47I | GGWCC | 5 cut(s) | 39, 178, 713, 1535, 2107 |
| Eco57I | CTGAAG | 1 cut(s) | 1986 |
| Eco88I | CYCGRG | 1 cut(s) | 855 |
| Eco91I | GGTNACC | 1 cut(s) | 736 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 327, 881 |
| EcoO109I | RGGNCCY | 1 cut(s) | 39 |
| EcoO65I | GGTNACC | 1 cut(s) | 736 |
| EcoRII | CCWGG | 4 cut(s) | 921, 1366, 1672, 1798 |
| EcoT14I | CCWWGG | 2 cut(s) | 716, 1878 |
| EcoT38I | GRGCYC | 1 cut(s) | 1563 |
| ErhI | CCWWGG | 2 cut(s) | 716, 1878 |
| FaeI | CATG | 9 cut(s) | 134, 371, 720, 920, 985, 1508, 1601, 1882, 2027 |
| FaqI | GGGAC | 3 cut(s) | 25, 324, 549 |
| FatI | CATG | 9 cut(s) | 130, 367, 716, 916, 981, 1504, 1597, 1878, 2023 |
| FauI | CCCGC | 1 cut(s) | 348 |
| FbaI | TGATCA | 1 cut(s) | 1294 |
| Fnu4HI | GCNGC | 4 cut(s) | 1275, 1901, 2118, 2121 |
| FokI | GGATG | 5 cut(s) | 58, 911, 1037, 1698, 1714 |
| FriOI | GRGCYC | 1 cut(s) | 1563 |
| Fsp4HI | GCNGC | 4 cut(s) | 1275, 1901, 2118, 2121 |
| FspBI | CTAG | 6 cut(s) | 708, 732, 1250, 1707, 1910, 2049 |
| GlaI | GCGC | 1 cut(s) | 290 |
| GluI | GCNGC | 4 cut(s) | 1275, 1901, 2118, 2121 |
| GsaI | CCCAGC | 1 cut(s) | 1719 |
| HaeIII | GGCC | 2 cut(s) | 1365, 1561 |
| HapII | CCGG | 4 cut(s) | 43, 1242, 1731, 1827 |
| HhaI | GCGC | 1 cut(s) | 291 |
| Hin1I | GRCGYC | 1 cut(s) | 827 |
| Hin1II | CATG | 9 cut(s) | 134, 371, 720, 920, 985, 1508, 1601, 1882, 2027 |
| Hin6I | GCGC | 1 cut(s) | 289 |
| HinP1I | GCGC | 1 cut(s) | 289 |
| HincII | GTYRAC | 1 cut(s) | 618 |
| HindII | GTYRAC | 1 cut(s) | 618 |
| HpaII | CCGG | 4 cut(s) | 43, 1242, 1731, 1827 |
| HphI | GGTGA | 4 cut(s) | 70, 1256, 1317, 2071 |
| Hpy166II | GTNNAC | 9 cut(s) | 91, 618, 713, 839, 845, 977, 1391, 1535, 2062 |
| Hpy8I | GTNNAC | 9 cut(s) | 91, 618, 713, 839, 845, 977, 1391, 1535, 2062 |
| Hpy99I | CGWCG | 1 cut(s) | 71 |
| HpyAV | CCTTC | 3 cut(s) | 199, 1189, 1863 |
| HpyCH4III | ACNGT | 3 cut(s) | 1445, 1483, 2066 |
| HpyCH4IV | ACGT | 3 cut(s) | 827, 841, 1974 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 127, 371, 380, 413, 1205 |
| HpyF3I | CTNAG | 8 cut(s) | 156, 212, 539, 882, 1200, 1281, 1857, 1896 |
| HpySE526I | ACGT | 3 cut(s) | 827, 841, 1974 |
| Hsp92I | GRCGYC | 1 cut(s) | 827 |
| Hsp92II | CATG | 9 cut(s) | 134, 371, 720, 920, 985, 1508, 1601, 1882, 2027 |
| HspAI | GCGC | 1 cut(s) | 289 |
| Ksp22I | TGATCA | 1 cut(s) | 1294 |
| LguI | GCTCTTC | 1 cut(s) | 10 |
| LmnI | GCTCC | 3 cut(s) | 1582, 1654, 2050 |
| Lsp1109I | GCAGC | 4 cut(s) | 1261, 1912, 2104, 2132 |
| LweI | GCATC | 8 cut(s) | 43, 325, 530, 850, 889, 1076, 1212, 1736 |
| MaeI | CTAG | 6 cut(s) | 708, 732, 1250, 1707, 1910, 2049 |
| MaeII | ACGT | 3 cut(s) | 827, 841, 1974 |
| MaeIII | GTNAC | 6 cut(s) | 58, 557, 736, 823, 1264, 1970 |
| MboII | GAAGA | 7 cut(s) | 27, 83, 113, 444, 596, 1098, 1459 |
| MfeI | CAATTG | 1 cut(s) | 192 |
| MflI | RGATCY | 3 cut(s) | 319, 1072, 1498 |
| MhlI | GDGCHC | 1 cut(s) | 1563 |
| MlyI | GAGTC | 5 cut(s) | 19, 35, 604, 922, 1088 |
| MmeI | TCCRAC | 2 cut(s) | 792, 876 |
| MslI | CAYNNNNRTG | 3 cut(s) | 464, 1437, 1596 |
| MspCI | CTTAAG | 1 cut(s) | 970 |
| MspI | CCGG | 4 cut(s) | 43, 1242, 1731, 1827 |
| MspR9I | CCNGG | 6 cut(s) | 43, 923, 1368, 1674, 1800, 1827 |
| MunI | CAATTG | 1 cut(s) | 192 |
| Mva1269I | GAATGC | 1 cut(s) | 1749 |
| MvaI | CCWGG | 4 cut(s) | 923, 1368, 1674, 1800 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 127, 371, 380, 413, 1205 |
| NciI | CCSGG | 2 cut(s) | 43, 1827 |
| NcoI | CCATGG | 2 cut(s) | 716, 1878 |
| NlaIII | CATG | 9 cut(s) | 134, 371, 720, 920, 985, 1508, 1601, 1882, 2027 |
| NlaIV | GGNNCC | 3 cut(s) | 41, 1561, 1876 |
| NmuCI | GTSAC | 4 cut(s) | 58, 557, 823, 1264 |
| NspI | RCATGY | 1 cut(s) | 134 |
| PaeR7I | CTCGAG | 1 cut(s) | 855 |
| PagI | TCATGA | 2 cut(s) | 367, 1504 |
| PaqCI | CACCTGC | 1 cut(s) | 421 |
| PasI | CCCWGGG | 1 cut(s) | 1367 |
| PciSI | GCTCTTC | 1 cut(s) | 10 |
| PctI | GAATGC | 1 cut(s) | 1749 |
| PfeI | GAWTC | 7 cut(s) | 5, 728, 764, 1004, 1049, 1565, 1700 |
| PflFI | GACNNNGTC | 2 cut(s) | 77, 1918 |
| PfoI | TCCNGGA | 3 cut(s) | 41, 1672, 1825 |
| PinAI | ACCGGT | 1 cut(s) | 1241 |
| PkrI | GCNGC | 4 cut(s) | 1276, 1902, 2119, 2122 |
| PleI | GAGTC | 5 cut(s) | 18, 34, 603, 921, 1088 |
| PpsI | GAGTC | 5 cut(s) | 18, 34, 603, 921, 1088 |
| PpuMI | RGGWCCY | 1 cut(s) | 39 |
| PshBI | ATTAAT | 1 cut(s) | 218 |
| Psp1406I | AACGTT | 1 cut(s) | 1974 |
| Psp5II | RGGWCCY | 1 cut(s) | 39 |
| Psp6I | CCWGG | 4 cut(s) | 921, 1366, 1672, 1798 |
| PspEI | GGTNACC | 1 cut(s) | 736 |
| PspFI | CCCAGC | 1 cut(s) | 1715 |
| PspGI | CCWGG | 4 cut(s) | 921, 1366, 1672, 1798 |
| PspN4I | GGNNCC | 3 cut(s) | 41, 1561, 1876 |
| PspOMI | GGGCCC | 1 cut(s) | 1559 |
| PspPI | GGNCC | 8 cut(s) | 39, 178, 713, 1364, 1535, 1559, 1560, 2107 |
| PspPPI | RGGWCCY | 1 cut(s) | 39 |
| PstI | CTGCAG | 2 cut(s) | 418, 2122 |
| PstNI | CAGNNNCTG | 1 cut(s) | 118 |
| PsuI | RGATCY | 3 cut(s) | 319, 1072, 1498 |
| PsyI | GACNNNGTC | 2 cut(s) | 77, 1918 |
| RsaI | GTAC | 3 cut(s) | 32, 840, 978 |
| RsaNI | GTAC | 3 cut(s) | 31, 839, 977 |
| RseI | CAYNNNNRTG | 3 cut(s) | 464, 1437, 1596 |
| SapI | GCTCTTC | 1 cut(s) | 10 |
| SatI | GCNGC | 4 cut(s) | 1275, 1901, 2118, 2121 |
| Sau96I | GGNCC | 8 cut(s) | 39, 178, 713, 1364, 1535, 1559, 1560, 2107 |
| SchI | GAGTC | 5 cut(s) | 19, 35, 604, 922, 1088 |
| ScrFI | CCNGG | 6 cut(s) | 43, 923, 1368, 1674, 1800, 1827 |
| SduI | GDGCHC | 1 cut(s) | 1563 |
| SfaNI | GCATC | 8 cut(s) | 43, 325, 530, 850, 889, 1076, 1212, 1736 |
| SfcI | CTRYAG | 3 cut(s) | 414, 903, 2118 |
| Sfr274I | CTCGAG | 1 cut(s) | 855 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1241 |
| SinI | GGWCC | 5 cut(s) | 39, 178, 713, 1535, 2107 |
| SlaI | CTCGAG | 1 cut(s) | 855 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 464, 1437, 1596 |
| SmlI | CTYRAG | 2 cut(s) | 855, 970 |
| SmoI | CTYRAG | 2 cut(s) | 855, 970 |
| SsiI | CCGC | 4 cut(s) | 56, 355, 1317, 1577 |
| SspMI | CTAG | 6 cut(s) | 708, 732, 1250, 1707, 1910, 2049 |
| StyD4I | CCNGG | 6 cut(s) | 41, 921, 1366, 1672, 1798, 1825 |
| StyI | CCWWGG | 2 cut(s) | 716, 1878 |
| TaaI | ACNGT | 3 cut(s) | 1445, 1483, 2066 |
| TaiI | ACGT | 3 cut(s) | 830, 844, 1977 |
| TaqI | TCGA | 6 cut(s) | 8, 13, 51, 66, 462, 856 |
| TfiI | GAWTC | 7 cut(s) | 5, 728, 764, 1004, 1049, 1565, 1700 |
| TscAI | CASTG | 6 cut(s) | 237, 285, 291, 1393, 1794, 2061 |
| TseFI | GTSAC | 4 cut(s) | 58, 557, 823, 1264 |
| TseI | GCWGC | 4 cut(s) | 1274, 1900, 2117, 2120 |
| Tsp45I | GTSAC | 4 cut(s) | 58, 557, 823, 1264 |
| TspDTI | ATGAA | 7 cut(s) | 481, 492, 596, 663, 998, 1208, 1976 |
| TspRI | CASTG | 6 cut(s) | 237, 285, 291, 1393, 1794, 2061 |
| Tth111I | GACNNNGTC | 2 cut(s) | 77, 1918 |
| Vha464I | CTTAAG | 1 cut(s) | 970 |
| VpaK11BI | GGWCC | 5 cut(s) | 39, 178, 713, 1535, 2107 |
| VspI | ATTAAT | 1 cut(s) | 218 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 327, 881 |
| XapI | RAATTY | 2 cut(s) | 274, 1963 |
| XbaI | TCTAGA | 1 cut(s) | 1249 |
| XceI | RCATGY | 1 cut(s) | 134 |
| XhoI | CTCGAG | 1 cut(s) | 855 |
| XspI | CTAG | 6 cut(s) | 708, 732, 1250, 1707, 1910, 2049 |
| ZraI | GACGTC | 1 cut(s) | 828 |