Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0008809

Physical Location & Seq

Genomic Coordinates Forward (+)

57102571 .. 57107692

Gene Structure 5122 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019821

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGGATTCGAGTCGGAGAGCTGTGGAGTCGTACTGGAGGTCTCGGATGGTCGATGCAGTTACGTCGGACGAAGACAAGGTCGCTCCAGTTTACAAATTGGAGGAGATTTGCCAGCTGCTCAGGTCCTCGCCTGGCAGTATCGTCAAGGAGATGTCTGAGTTTGTGTTGAAGCGTCTCGACCATAAAAGCCCTATTGTTAAACAGAAGGCTCTGCGATTGATAAAATATGCAGTGGGAAAGTCTGGTGTAGAGTTCAGGAGAGAAATGCAGAGACATTCAGTGGCTGTGCGCCAGTTATTTCACTACAAGGGACAGCCAGATCCTTTGAAAGGAGATGCGCTTAATAAGGCTGTGCGGGACACTGCTCAGGAGGCTATTGCTGCTATCTTTTCAGAGGAAAGTAAGCCCGCACCTGCAGAAGATCTTAACAGACGAATTCAAGGTTTTGGGAATACAAACTATGAAATGCCAACAGAGGAAAAGAAATCGTTTATTAGTGAGGTAGTTGGTCTTGGAAGTGCATCTATCAAGCAGGGGTTTAGTACTTTCACCCAAGGTCAGTCATTTAAAAAGAATGACAATGGAAGCTACAAGAGTCCTAATCTTCATAGGTCGTTGACTATGGAAGGGAAAGCAGATAAATATGAACCATTTCAGTATCCCAATCAGACTCAGAGTAGTTTTGGAAATTCAAAGAATGTGGCTAATGGACCCTGGGGTGAGGACTCAAGGTCAACCAAGCCTGAACTAACTAATGGAGATTCTAGTTCGAGTTATAGAGAGAGTAAGACCCGTGAGGAGAGGTTGTTGGAGACCATTGTAACGTCAGGTGGTGTACGCTTACAACCCACTCGAGATGCTATTCAGGTTTTCCTTGCAGAGGCGGCAAAATTGGATGCGGTAGCATTAAGTCTTGCCCTTGAATCAAAGCTCCAATCTCCATTGTGGCAGGTGCGCATGAAAGCTATCTGTGTTCTTGAGTCAATATTGAGGAGAAAGGATGATGAGAATTTTTCAATTATTGAATCCTATTTTATTGAGAACAAAGATGCTGTAGCGAGATGCTCAGAGTCTCCCCAAGCTTCTTTGCGAGAAAAGGCTAACAAGGTTATAAACCTCTTAGGTGGAGAACAGACAGGAATTGTGGCAGGTAATTCTGAAGAGCGTGGGAAGGCTCAGACTACGACCGTTGTTCAGATGCCTGACCTGATAGACACCGGTGATCTAGATGATTATCATGGAACAGATGCTGCAGAGAACCAAAATGAGCAAGTCATCACAAACTTAACTGCACCACCCCAACTAATAGATGATTTATTTGGAGATGCCCAAGGGAATGTCGTAAGCACCAGTGAACTGAAAAATGAGGATGATCCCTTTGCTGATGTCTCATTCCACACTAATGAAAGTAAAGAACATGTAGATGATCTCTTCTCTGGGCTTACTATTGATGATAAACTAGATGCTCAGGAGGATGCTATCGGAGGAAAGAAAAATGGATCTGAAATATTTGATATTTTTGGTCCTAATCCTGAACTTCCACATGAGCAAGATCATACTAATAATTTGAACAATTTAATGGTTGGTGTATCTATTGATAAAGATGCCTCTAAGATGGAGCAAAAGGGAACCTCTCCTGGAATAGTATCTGATAGTCTTTTGTCAGACTCAAGTAGTCAACCCAGCCATCAGATCTCCACGGATGCTTGGAGTGGAATTCTCAATTCTCAAACAGAACGGACGAGTGAAACTCCAATATTTCCTCCAGGTGCTATTCCTTACAATGTACCTCCTGGCTTTATGTTCAACCCAGCCTTTTCTTCTCAGCCAATAAATTATGGTGCCATGGGAAGTCTCTTTGCTCAGCAGCAATTCCTAACGACAATGTCCAATTTCCAACACCTTGGGAACCTCAATGCTCAAAATCCAAACTTAAGTCAAGTTGCTGGAACAAATGGAGGATACAATCCAGCACTTCCCGATATATTCCAGGCAAATCATCTGAATCAAGCTCCTAGTTCAATGATGAACAGTGCAAAGAAAGAGGATAGCAAAGCATTTGATTTTATCTCAGACCACATTGCTGCTGCTCGTGATCCCAAGAGGGTGGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0006810 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0022607 GO:0030135 GO:0030136 GO:0030276 GO:0031410 GO:0031982 GO:0031984 GO:0034622 GO:0035459 GO:0035652 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0065003 GO:0071840 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

ENTH

Protein Analysis

705

Amino Acids

77.42

Weight (kDa)

5.15

Isoelectric Point (pI)

46.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16270 AT3G16270 AT3G16270
fragaria_vesca	FvH4_6g32000
malus_domestica	MD09G1207100.v1.1 MD17G1187800.v1.1
prunus_persica	Prupe.3G063200_v2.0.a1 Prupe.3G063200_v2.0.a1
pyrus_communis	pycom09g12350 pycom17g19670
rosa_chinensis	RchiOBHm_Chr2g0139591 RchiOBHm_Chr2g0139601
rosa_laevigata	RLG00000019821
rosa_multiflora	Rmu_sc0003427.1_g000003
rosa_roxburghii	Rroxscaffold_2G00105370
rosa_rugosa	Rorug02G0358500 Rorug02G0358600 Rorug02G0358600
rosa_samantha	Rh2AG408400 Rh2BG419000 Rh2CG394400 Rh2DG428100
rosa_wichuraiana	Rw2G033520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1112
AarI	CACCTGC	2 cut(s)	421, 940
Acc16I	TGCGCA	1 cut(s)	956
Acc36I	ACCTGC	3 cut(s)	421, 940, 1139
AccB1I	GGYRCC	1 cut(s)	1841
AciI	CCGC	4 cut(s)	355, 408, 884, 899
AclWI	GGATC	4 cut(s)	314, 1367, 1507, 2090
AcsI	RAATTY	4 cut(s)	435, 688, 1009, 1716
AcuI	CTGAAG	1 cut(s)	1179
AfaI	GTAC	4 cut(s)	32, 544, 837, 1788
AfiI	CCNNNNNNNGG	2 cut(s)	329, 880
AflII	CTTAAG	1 cut(s)	1933
AflIII	ACRYGT	1 cut(s)	1417
AgeI	ACCGGT	1 cut(s)	1217
AhdI	GACNNNNNGTC	1 cut(s)	730
AjnI	CCWGG	6 cut(s)	130, 713, 1636, 1765, 1792, 1989
AluBI	AGCT	7 cut(s)	20, 115, 588, 931, 965, 1082, 2012
AluI	AGCT	7 cut(s)	20, 115, 588, 931, 965, 1082, 2012
Alw26I	GTCTC	7 cut(s)	45, 179, 265, 806, 1077, 1393, 1859
AlwI	GGATC	4 cut(s)	314, 1367, 1507, 2090
AlwNI	CAGNNNCTG	2 cut(s)	284, 1250
Ama87I	CYCGRG	1 cut(s)	852
ApeKI	GCWGC	6 cut(s)	115, 380, 1250, 1867, 2084, 2087
ApoI	RAATTY	4 cut(s)	435, 688, 1009, 1716
ArsI	GACNNNNNNTTYG	2 cut(s)	63, 95
AsiGI	ACCGGT	1 cut(s)	1217
Asp700I	GAANNNNTTC	1 cut(s)	651
AspLEI	GCGC	3 cut(s)	291, 340, 957
AspS9I	GGNCC	3 cut(s)	123, 710, 1523
AsuHPI	GGTGA	3 cut(s)	541, 731, 1232
AvaI	CYCGRG	1 cut(s)	852
AvaII	GGWCC	3 cut(s)	123, 710, 1523
BanI	GGYRCC	1 cut(s)	1841
BauI	CACGAG	1 cut(s)	2091
BbsI	GAAGAC	1 cut(s)	78
BbvI	GCAGC	6 cut(s)	102, 367, 1237, 1879, 2071, 2074
BccI	CCATC	3 cut(s)	40, 1609, 1695
BcgI	CGANNNNNNTGC	2 cut(s)	45, 79
BciT130I	CCWGG	6 cut(s)	132, 715, 1638, 1767, 1794, 1991
BciVI	GTATCC	2 cut(s)	669, 1955
BcoDI	GTCTC	7 cut(s)	45, 179, 265, 806, 1077, 1393, 1859
BfaI	CTAG	4 cut(s)	765, 1226, 1460, 2016
BfmI	CTRYAG	3 cut(s)	414, 1053, 1251
BfrI	CTTAAG	1 cut(s)	1933
BfuAI	ACCTGC	3 cut(s)	421, 940, 1139
BfuI	GTATCC	2 cut(s)	669, 1955
BglII	AGATCT	2 cut(s)	421, 1692
BisI	GCNGC	7 cut(s)	116, 381, 885, 1251, 1868, 2085, 2088
BlpI	GCTNAGC	1 cut(s)	1863
BlsI	GCNGC	7 cut(s)	117, 382, 886, 1252, 1869, 2086, 2089
BmcAI	AGTACT	1 cut(s)	544
Bme1390I	CCNGG	6 cut(s)	132, 715, 1638, 1767, 1794, 1991
Bme18I	GGWCC	3 cut(s)	123, 710, 1523
BmeRI	GACNNNNNGTC	1 cut(s)	730
BmeT110I	CYCGRG	1 cut(s)	852
BmgT120I	GGNCC	3 cut(s)	123, 710, 1523
BmiI	GGNNCC	4 cut(s)	712, 1630, 1843, 1910
BmrFI	CCNGG	6 cut(s)	132, 715, 1638, 1767, 1794, 1991
BpiI	GAAGAC	1 cut(s)	78
BplI	GAGNNNNNCTC	2 cut(s)	1735, 1767
BpmI	CTGGAG	3 cut(s)	55, 69, 1749
Bpu10I	CCTNAGC	3 cut(s)	119, 366, 1467
Bpu1102I	GCTNAGC	1 cut(s)	1863
BpuEI	CTTGAG	3 cut(s)	712, 998, 1654
BsaBI	GATNNNNATC	1 cut(s)	1233
BsaI	GGTCTC	2 cut(s)	45, 806
BsaJI	CCNNGG	7 cut(s)	553, 713, 714, 1330, 1698, 1845, 1903
BsaWI	WCCGGW	1 cut(s)	1217
BsaXI	ACNNNNNCTCC	2 cut(s)	791, 821
Bsc4I	CCNNNNNNNGG	2 cut(s)	329, 880
Bse118I	RCCGGY	1 cut(s)	1217
Bse1I	ACTGG	4 cut(s)	38, 86, 292, 1350
Bse3DI	GCAATG	1 cut(s)	2079
Bse8I	GATNNNNATC	1 cut(s)	1233
BseBI	CCWGG	6 cut(s)	132, 715, 1638, 1767, 1794, 1991
BseDI	CCNNGG	7 cut(s)	553, 713, 714, 1330, 1698, 1845, 1903
BseGI	GGATG	6 cut(s)	51, 901, 1006, 1375, 1480, 1708
BseJI	GATNNNNATC	1 cut(s)	1233
BseLI	CCNNNNNNNGG	2 cut(s)	329, 880
BseMI	GCAATG	1 cut(s)	2079
BseNI	ACTGG	4 cut(s)	38, 86, 292, 1350
BseRI	GAGGAG	3 cut(s)	116, 812, 1006
BseXI	GCAGC	6 cut(s)	102, 367, 1237, 1879, 2071, 2074
BseYI	CCCAGC	2 cut(s)	1682, 1810
BsgI	GTGCAG	1 cut(s)	1275
Bsh1285I	CGRYCG	1 cut(s)	1188
BshNI	GGYRCC	1 cut(s)	1841
BshTI	ACCGGT	1 cut(s)	1217
BsiEI	CGRYCG	1 cut(s)	1188
BsiHKCI	CYCGRG	1 cut(s)	852
BsiSI	CCGG	1 cut(s)	1218
BslFI	GGGAC	2 cut(s)	324, 371
BslI	CCNNNNNNNGG	2 cut(s)	329, 880
BsmAI	GTCTC	7 cut(s)	45, 179, 265, 806, 1077, 1393, 1859
BsmBI	CGTCTC	1 cut(s)	179
BsmFI	GGGAC	2 cut(s)	324, 371
Bso31I	GGTCTC	2 cut(s)	45, 806
BsoBI	CYCGRG	1 cut(s)	852
Bsp143I	GATC	9 cut(s)	319, 421, 1222, 1372, 1426, 1499, 1552, 1692, 2095
Bsp1720I	GCTNAGC	1 cut(s)	1863
Bsp19I	CCATGG	1 cut(s)	1845
BspACI	CCGC	4 cut(s)	355, 408, 884, 899
BspLI	GGNNCC	4 cut(s)	712, 1630, 1843, 1910
BspMAI	CTGCAG	2 cut(s)	418, 1255
BspMI	ACCTGC	3 cut(s)	421, 940, 1139
BspPI	GGATC	4 cut(s)	314, 1367, 1507, 2090
BspQI	GCTCTTC	1 cut(s)	1155
BspT107I	GGYRCC	1 cut(s)	1841
BspTI	CTTAAG	1 cut(s)	1933
BspTNI	GGTCTC	2 cut(s)	45, 806
BsrDI	GCAATG	1 cut(s)	2079
BsrFI	RCCGGY	1 cut(s)	1217
BsrI	ACTGG	4 cut(s)	38, 86, 292, 1350
BssAI	RCCGGY	1 cut(s)	1217
BssECI	CCNNGG	7 cut(s)	553, 713, 714, 1330, 1698, 1845, 1903
BssMI	GATC	9 cut(s)	319, 421, 1222, 1372, 1426, 1499, 1552, 1692, 2095
BssSI	CACGAG	1 cut(s)	2091
BssT1I	CCWWGG	4 cut(s)	553, 1330, 1845, 1903
Bst2BI	CACGAG	1 cut(s)	2091
Bst2UI	CCWGG	6 cut(s)	132, 715, 1638, 1767, 1794, 1991
Bst4CI	ACNGT	2 cut(s)	1189, 2033
Bst6I	CTCTTC	2 cut(s)	1155, 1436
BstAFI	CTTAAG	1 cut(s)	1933
BstC8I	GCNNGC	2 cut(s)	113, 408
BstDSI	CCRYGG	2 cut(s)	1698, 1845
BstENI	CCTNNNNNAGG	2 cut(s)	327, 878
BstF5I	GGATG	6 cut(s)	51, 901, 1006, 1375, 1480, 1708
BstHHI	GCGC	3 cut(s)	291, 340, 957
BstKTI	GATC	9 cut(s)	322, 424, 1225, 1375, 1429, 1502, 1555, 1695, 2098
BstMAI	GTCTC	7 cut(s)	45, 179, 265, 806, 1077, 1393, 1859
BstMBI	GATC	9 cut(s)	319, 421, 1222, 1372, 1426, 1499, 1552, 1692, 2095
BstMCI	CGRYCG	1 cut(s)	1188
BstMWI	GCNNNNNNNGC	3 cut(s)	371, 380, 884
BstNI	CCWGG	6 cut(s)	132, 715, 1638, 1767, 1794, 1991
BstNSI	RCATGY	1 cut(s)	1421
BstSCI	CCNGG	6 cut(s)	130, 713, 1636, 1765, 1792, 1989
BstSFI	CTRYAG	3 cut(s)	414, 1053, 1251
BstV1I	GCAGC	6 cut(s)	102, 367, 1237, 1879, 2071, 2074
BstV2I	GAAGAC	1 cut(s)	78
BstX2I	RGATCY	4 cut(s)	319, 421, 1499, 1692
BstXI	CCANNNNNNTGG	2 cut(s)	1904, 2107
BstYI	RGATCY	4 cut(s)	319, 421, 1499, 1692
BsuI	GTATCC	2 cut(s)	669, 1955
BtgI	CCRYGG	2 cut(s)	1698, 1845
BtsCI	GGATG	6 cut(s)	51, 901, 1006, 1375, 1480, 1708
BtsI	GCAGTG	2 cut(s)	237, 360
BtsIMutI	CAGTG	5 cut(s)	237, 285, 360, 1357, 2038
BveI	ACCTGC	3 cut(s)	421, 940, 1139
Cac8I	GCNNGC	2 cut(s)	113, 408
CaiI	CAGNNNCTG	2 cut(s)	284, 1250
CfoI	GCGC	3 cut(s)	291, 340, 957
Cfr10I	RCCGGY	1 cut(s)	1217
Cfr13I	GGNCC	3 cut(s)	123, 710, 1523
CseI	GACGC	1 cut(s)	161
Csp6I	GTAC	4 cut(s)	31, 543, 836, 1787
CspAI	ACCGGT	1 cut(s)	1217
CspCI	CAANNNNNGTGG	2 cut(s)	681, 716
CviAII	CATG	5 cut(s)	958, 1238, 1418, 1544, 1846
CviQI	GTAC	4 cut(s)	31, 543, 836, 1787
DpnI	GATC	9 cut(s)	321, 423, 1224, 1374, 1428, 1501, 1554, 1694, 2097
DpnII	GATC	9 cut(s)	319, 421, 1222, 1372, 1426, 1499, 1552, 1692, 2095
DraI	TTTAAA	1 cut(s)	568
DriI	GACNNNNNGTC	1 cut(s)	730
Eam1104I	CTCTTC	2 cut(s)	1155, 1436
Eam1105I	GACNNNNNGTC	1 cut(s)	730
EarI	CTCTTC	2 cut(s)	1155, 1436
Eco130I	CCWWGG	4 cut(s)	553, 1330, 1845, 1903
Eco31I	GGTCTC	2 cut(s)	45, 806
Eco47I	GGWCC	3 cut(s)	123, 710, 1523
Eco57I	CTGAAG	1 cut(s)	1179
Eco88I	CYCGRG	1 cut(s)	852
EcoNI	CCTNNNNNAGG	2 cut(s)	327, 878
EcoO109I	RGGNCCY	1 cut(s)	123
EcoRI	GAATTC	2 cut(s)	435, 1716
EcoRII	CCWGG	6 cut(s)	130, 713, 1636, 1765, 1792, 1989
EcoT14I	CCWWGG	4 cut(s)	553, 1330, 1845, 1903
ErhI	CCWWGG	4 cut(s)	553, 1330, 1845, 1903
Esp3I	CGTCTC	1 cut(s)	179
FaeI	CATG	5 cut(s)	961, 1241, 1421, 1547, 1849
FaqI	GGGAC	2 cut(s)	324, 371
FatI	CATG	5 cut(s)	957, 1237, 1417, 1543, 1845
FauI	CCCGC	2 cut(s)	348, 415
Fnu4HI	GCNGC	7 cut(s)	116, 381, 885, 1251, 1868, 2085, 2088
FokI	GGATG	6 cut(s)	58, 908, 1013, 1382, 1487, 1715
Fsp4HI	GCNGC	7 cut(s)	116, 381, 885, 1251, 1868, 2085, 2088
FspAI	RTGCGCAY	1 cut(s)	956
FspBI	CTAG	4 cut(s)	765, 1226, 1460, 2016
FspI	TGCGCA	1 cut(s)	956
GlaI	GCGC	3 cut(s)	290, 339, 956
GluI	GCNGC	7 cut(s)	116, 381, 885, 1251, 1868, 2085, 2088
GsaI	CCCAGC	2 cut(s)	1686, 1814
GsuI	CTGGAG	3 cut(s)	55, 69, 1749
HapII	CCGG	1 cut(s)	1218
HgaI	GACGC	1 cut(s)	161
HhaI	GCGC	3 cut(s)	291, 340, 957
Hin1II	CATG	5 cut(s)	961, 1241, 1421, 1547, 1849
Hin6I	GCGC	3 cut(s)	289, 338, 955
HinP1I	GCGC	3 cut(s)	289, 338, 955
HincII	GTYRAC	3 cut(s)	618, 735, 1679
HindII	GTYRAC	3 cut(s)	618, 735, 1679
HindIII	AAGCTT	1 cut(s)	1080
HpaII	CCGG	1 cut(s)	1218
HphI	GGTGA	3 cut(s)	541, 731, 1232
Hpy166II	GTNNAC	6 cut(s)	91, 618, 735, 836, 1355, 1679
Hpy8I	GTNNAC	6 cut(s)	91, 618, 735, 836, 1355, 1679
Hpy99I	CGWCG	1 cut(s)	67
HpyAV	CCTTC	3 cut(s)	199, 620, 1165
HpyCH4III	ACNGT	2 cut(s)	1189, 2033
HpyCH4IV	ACGT	2 cut(s)	62, 824
HpyCH4V	TGCA	9 cut(s)	56, 230, 268, 416, 521, 878, 1253, 1292, 2036
HpyF10VI	GCNNNNNNNGC	3 cut(s)	371, 380, 884
HpySE526I	ACGT	2 cut(s)	62, 824
Hsp92II	CATG	5 cut(s)	961, 1241, 1421, 1547, 1849
HspAI	GCGC	3 cut(s)	289, 338, 955
Kzo9I	GATC	9 cut(s)	319, 421, 1222, 1372, 1426, 1499, 1552, 1692, 2095
LguI	GCTCTTC	1 cut(s)	1155
LmnI	GCTCC	4 cut(s)	88, 936, 1618, 2017
Lsp1109I	GCAGC	6 cut(s)	102, 367, 1237, 1879, 2071, 2074
MaeI	CTAG	4 cut(s)	765, 1226, 1460, 2016
MaeII	ACGT	2 cut(s)	62, 824
MaeIII	GTNAC	2 cut(s)	58, 820
MalI	GATC	9 cut(s)	321, 423, 1224, 1374, 1428, 1501, 1554, 1694, 2097
MboI	GATC	9 cut(s)	319, 421, 1222, 1372, 1426, 1499, 1552, 1692, 2095
MboII	GAAGA	6 cut(s)	83, 431, 596, 1172, 1423, 1812
MflI	RGATCY	4 cut(s)	319, 421, 1499, 1692
MlyI	GAGTC	8 cut(s)	19, 35, 604, 664, 719, 989, 1079, 1661
MmeI	TCCRAC	3 cut(s)	45, 789, 1921
MroXI	GAANNNNTTC	1 cut(s)	651
MseI	TTAA	8 cut(s)	198, 342, 426, 567, 908, 1286, 1577, 1934
MslI	CAYNNNNRTG	2 cut(s)	1401, 1422
MspA1I	CMGCKG	1 cut(s)	115
MspCI	CTTAAG	1 cut(s)	1933
MspI	CCGG	1 cut(s)	1218
MspR9I	CCNGG	6 cut(s)	132, 715, 1638, 1767, 1794, 1991
MvaI	CCWGG	6 cut(s)	132, 715, 1638, 1767, 1794, 1991
MwoI	GCNNNNNNNGC	3 cut(s)	371, 380, 884
NcoI	CCATGG	1 cut(s)	1845
NdeII	GATC	9 cut(s)	319, 421, 1222, 1372, 1426, 1499, 1552, 1692, 2095
NlaIII	CATG	5 cut(s)	961, 1241, 1421, 1547, 1849
NlaIV	GGNNCC	4 cut(s)	712, 1630, 1843, 1910
NsbI	TGCGCA	1 cut(s)	956
NspI	RCATGY	1 cut(s)	1421
PaeR7I	CTCGAG	1 cut(s)	852
PaqCI	CACCTGC	2 cut(s)	421, 940
PasI	CCCWGGG	1 cut(s)	714
PciI	ACATGT	1 cut(s)	1417
PciSI	GCTCTTC	1 cut(s)	1155
PdmI	GAANNNNTTC	1 cut(s)	651
PfeI	GAWTC	5 cut(s)	5, 761, 923, 1025, 2005
PflFI	GACNNNGTC	2 cut(s)	77, 1885
PfoI	TCCNGGA	1 cut(s)	1636
PinAI	ACCGGT	1 cut(s)	1217
PkrI	GCNGC	7 cut(s)	117, 382, 886, 1252, 1869, 2086, 2089
PleI	GAGTC	8 cut(s)	18, 34, 603, 664, 719, 988, 1078, 1661
PpsI	GAGTC	8 cut(s)	18, 34, 603, 664, 719, 988, 1078, 1661
PpuMI	RGGWCCY	1 cut(s)	123
PscI	ACATGT	1 cut(s)	1417
PsiI	TTATAA	1 cut(s)	1112
Psp5II	RGGWCCY	1 cut(s)	123
Psp6I	CCWGG	6 cut(s)	130, 713, 1636, 1765, 1792, 1989
PspFI	CCCAGC	2 cut(s)	1682, 1810
PspGI	CCWGG	6 cut(s)	130, 713, 1636, 1765, 1792, 1989
PspN4I	GGNNCC	4 cut(s)	712, 1630, 1843, 1910
PspPI	GGNCC	3 cut(s)	123, 710, 1523
PspPPI	RGGWCCY	1 cut(s)	123
PstI	CTGCAG	2 cut(s)	418, 1255
PstNI	CAGNNNCTG	2 cut(s)	284, 1250
PsuI	RGATCY	4 cut(s)	319, 421, 1499, 1692
PsyI	GACNNNGTC	2 cut(s)	77, 1885
PvuII	CAGCTG	1 cut(s)	115
RsaI	GTAC	4 cut(s)	32, 544, 837, 1788
RsaNI	GTAC	4 cut(s)	31, 543, 836, 1787
RseI	CAYNNNNRTG	2 cut(s)	1401, 1422
SapI	GCTCTTC	1 cut(s)	1155
SaqAI	TTAA	8 cut(s)	198, 342, 426, 567, 908, 1286, 1577, 1934
SatI	GCNGC	7 cut(s)	116, 381, 885, 1251, 1868, 2085, 2088
Sau3AI	GATC	9 cut(s)	319, 421, 1222, 1372, 1426, 1499, 1552, 1692, 2095
Sau96I	GGNCC	3 cut(s)	123, 710, 1523
ScaI	AGTACT	1 cut(s)	544
SchI	GAGTC	8 cut(s)	19, 35, 604, 664, 719, 989, 1079, 1661
ScrFI	CCNGG	6 cut(s)	132, 715, 1638, 1767, 1794, 1991
SfcI	CTRYAG	3 cut(s)	414, 1053, 1251
Sfr274I	CTCGAG	1 cut(s)	852
SgrAI	CRCCGGYG	1 cut(s)	1217
SinI	GGWCC	3 cut(s)	123, 710, 1523
SlaI	CTCGAG	1 cut(s)	852
SmiMI	CAYNNNNRTG	2 cut(s)	1401, 1422
SmlI	CTYRAG	5 cut(s)	727, 852, 977, 1669, 1933
SmoI	CTYRAG	5 cut(s)	727, 852, 977, 1669, 1933
SsiI	CCGC	4 cut(s)	355, 408, 884, 899
SspI	AATATT	3 cut(s)	987, 1509, 1758
SspMI	CTAG	4 cut(s)	765, 1226, 1460, 2016
StyD4I	CCNGG	6 cut(s)	130, 713, 1636, 1765, 1792, 1989
StyI	CCWWGG	4 cut(s)	553, 1330, 1845, 1903
TaaI	ACNGT	2 cut(s)	1189, 2033
TaiI	ACGT	2 cut(s)	65, 827
TaqI	TCGA	5 cut(s)	8, 51, 177, 770, 853
TatI	WGTACW	1 cut(s)	542
TauI	GCSGC	1 cut(s)	887
TfiI	GAWTC	5 cut(s)	5, 761, 923, 1025, 2005
Tru1I	TTAA	8 cut(s)	198, 342, 426, 567, 908, 1286, 1577, 1934
Tru9I	TTAA	8 cut(s)	198, 342, 426, 567, 908, 1286, 1577, 1934
TscAI	CASTG	5 cut(s)	237, 285, 367, 1357, 2038
TseI	GCWGC	6 cut(s)	115, 380, 1250, 1867, 2084, 2087
TspDTI	ATGAA	6 cut(s)	477, 596, 660, 974, 1419, 2042
TspGWI	ACGGA	2 cut(s)	1715, 1753
TspRI	CASTG	5 cut(s)	237, 285, 367, 1357, 2038
Tth111I	GACNNNGTC	2 cut(s)	77, 1885
Vha464I	CTTAAG	1 cut(s)	1933
VpaK11BI	GGWCC	3 cut(s)	123, 710, 1523
XagI	CCTNNNNNAGG	2 cut(s)	327, 878
XapI	RAATTY	4 cut(s)	435, 688, 1009, 1716
XbaI	TCTAGA	1 cut(s)	1225
XceI	RCATGY	1 cut(s)	1421
XhoI	CTCGAG	1 cut(s)	852
XmnI	GAANNNNTTC	1 cut(s)	651
XspI	CTAG	4 cut(s)	765, 1226, 1460, 2016
ZrmI	AGTACT	1 cut(s)	544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.