Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0008809

Physical Location & Seq

Genomic Coordinates Forward (+)

45284991 .. 45290120

Gene Structure 5130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0358500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGAGAGGCAGAGGGCACGGCGCAGAACAACAATTAAAAGAACAGGCAATGGCAGTGGCCATAGACAAGGACAAAGGAAGTGAATATGCAATCAAATGGGCTATTGATAGTCTCTTAACAAGGGGCCAAGCTCTCACATTGCTCCATGTTAGACATCCATATCCTGGCCGAACTGCGTCAACGGAGAATCAAAAGGATCCCCAATCACATGAGTTATTTCTTTCGTTTCGTTCCTTTTGCGCGAAAAAAAATATAAAATGCACTGAAGTCATACTCGAGGACAATGACATACCAAACGCACTGATCAAGTATGTTAAAGCAAACTCAATTGAGATTTTGGTACTTGGTGTTCCAACAAGAGGTGGCATTTTCAGATTCAAATTTACAGATGTACCGAGCAGTGTGATAAAAATGACGCCAGAATTTTGCTCTGTTTATGTCATCGCTAAAGGAAAAATCTCATATATGCGATGCTCCACCGTAGCACCGCCACAGCCTCCTCCACGTAGTAATCATCAAATGCAGCACCATCCCAGCAATGTTTCTGAAGCAAGTGATTCGCATTTCATCCGCACCCAGAAGCCTAACAGCAGAGCATCAGAGAAGTTGCATTATCAATCGGGTAGCCAGCAGTTTGATGAAATCAAGTCACCATTCACTAGAGGAAGACCTTCGATGGACAGATCATTTGAGCTCCCACCAGATAGTGACATATCGTTTGTGAGTAGTGGAAGACCAAGTGTGGATCACATGTATCCTTCTTTCTATGATAGTATGCATTCAGGGAGGAACTCTCGACGTTTGATTGGCTCAGAAACGGAAAACGGAAGCTCTGTGTCATCCAACCCGAGAAGCAAGCATTTTATGGAAATCAACTCTCCACAACTTGAATTTTCACGATCCTCAGTTGATAGTGGAAACTCTTGGTTATCACAAAATAATAATAATAATCTGGAAGATGTGGAGCTTGAGATGAGGAGGCTCAGGCTAGAGCTCAAGCAAACAATGGAGATGTACAATACGGCGTGCAAAGAAGCACTGACAGCAAAACATAAGGAAAATGAACTTAATCGGTGCAAAATGGAAGAAGGACAAAGATTAGAACAGGCACGACTAGCTGAGGAAGCTGCATTGGCACTTGTAGAGAGGGAGAAAGCAAAATGCAAGGCAGCGATTGAAGCAGCTGCAGCAGCTCAAAGGCTTGCTAAACTGGAAGCACAAAAGAGGTGGAACGCAGAAATGAAAGCCCTTAAAGAATCTGAAGAGAGGAAGAAGTCACTTGAAGCAAAGTCATATGATGTTAGGTACAGGAAGTACACAATTGAGGAGATTGAAGTGGCAACAGATAAATTTTCACTGGCTCGCAAGGTTGGGGAAGGAGGCTATGGACCAGTATACAGAGGTGAACTGGATCATACACCAGTTGCTATAAAAGTTCTACGTCCGGATGCAGCTCAAGGGCGATCGCAGTTCCAGCAAGAGGTTGAAGTATTGAGCTGCATACGACATCCAAACATGGTTCTCCTTCTTGGAGCTTGTCCAGAGTACGGTTGTTTAGTTTATGAGTACATGGCTAATGGGAGCTTGGAAGATCGTCTATTTCACCGAGGTAACACCCCGACTATTCCTTGGCAGCTAAGGTTTCGAATTGCTGCAGAAATTGCAACGGGGCTCTTATTCCTTCATCAGGCTAAGCCGGAACCCCTTGTGCACCGTGACCTAAAACCTGGCAACATATTGCTAGATAATAACTATGTGAGCAAGATTAGTGATGTAGGTTTGGCTAGACTTGTGCCTCCATCAGTAGCTGATGCTGTCACACAGTATCATATGACATCAACAGCTGGAACATTTTGCTACATCGATCCAGAGTATCAGCAAACAGGCATGCTCGGAACAAAATCTGATATCTACTCACTGGGTGTGATGCTTCTACAAATCATTACAGCCAAACCACCAATGGGTTTGACTCATCATGTAGAGCGGGCTATTGAGACAGGAAGCTTTAGTGAGATGCTTGATCCTGCTGTTCCTGATTGGCCAGTTGAGGAAGCCTTGAACTTTGCCAAACTTTCTTTACAGTGTGCTGAAATGAGAAAAAAAGACCGACCAGATCTTGGGAAGGTTATACTGCCTGAGCTTAACAGATTGAGAGCCCTCGCCGACGATAGCTTCCAATGTGTTGTGTTTGGCGGAGGTGGAGTACTCTCACCAAATCAAGACTCAAATTCTACATCACAAGATGTCATAAGTCGACCACAATCTGGATATGATAGCTTGAGGAGTCGTACTTCGAGCACATCATCTCATTCTGAAAGAAGTAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0006810 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0022607 GO:0030135 GO:0030136 GO:0030276 GO:0031410 GO:0031982 GO:0031984 GO:0034622 GO:0035459 GO:0035652 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0065003 GO:0071840 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

ENTH

Protein Analysis

775

Amino Acids

86.86

Weight (kDa)

8.25

Isoelectric Point (pI)

52.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Usp	PF00582	18 - 140	3.3e-11	Universal stress protein family
Pkinase	PF00069	452 - 704	4.7e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	453 - 709	7.4e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16270 AT3G16270 AT3G16270
fragaria_vesca	FvH4_6g32000
malus_domestica	MD09G1207100.v1.1 MD17G1187800.v1.1
prunus_persica	Prupe.3G063200_v2.0.a1 Prupe.3G063200_v2.0.a1
pyrus_communis	pycom09g12350 pycom17g19670
rosa_chinensis	RchiOBHm_Chr2g0139591 RchiOBHm_Chr2g0139601
rosa_laevigata	RLG00000019821
rosa_multiflora	Rmu_sc0003427.1_g000003
rosa_roxburghii	Rroxscaffold_2G00105370
rosa_rugosa	Rorug02G0358500 Rorug02G0358600 Rorug02G0358600
rosa_samantha	Rh2AG408400 Rh2BG419000 Rh2CG394400 Rh2DG428100
rosa_wichuraiana	Rw2G033520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	164, 2117, 2264
AccBSI	CCGCTC	1 cut(s)	1984
AccI	GTMKAC	2 cut(s)	1395, 2254
AccII	CGCG	1 cut(s)	242
AccIII	TCCGGA	1 cut(s)	1444
AciI	CCGC	4 cut(s)	488, 571, 1984, 2193
AclWI	GGATC	7 cut(s)	191, 204, 753, 894, 1419, 1859, 2015
AcoI	YGGCCR	3 cut(s)	57, 166, 2039
AcsI	RAATTY	5 cut(s)	380, 422, 890, 1349, 2227
AcuI	CTGAAG	3 cut(s)	285, 567, 1281
AcyI	GRCGYC	1 cut(s)	416
AdeI	CACNNNGTG	1 cut(s)	1922
AfaI	GTAC	9 cut(s)	342, 393, 1016, 1307, 1316, 1547, 1568, 2205, 2290
AfiI	CCNNNNNNNGG	8 cut(s)	164, 359, 1480, 1547, 1687, 1961, 2117, 2264
AflIII	ACRYGT	1 cut(s)	750
AgsI	TTSAA	7 cut(s)	379, 890, 1178, 1283, 1334, 1487, 2059
AjnI	CCWGG	2 cut(s)	163, 1726
Alw21I	GWGCWC	4 cut(s)	696, 996, 1713, 2300
Alw26I	GTCTC	2 cut(s)	116, 1988
Alw44I	GTGCAC	1 cut(s)	1709
AlwI	GGATC	7 cut(s)	191, 204, 753, 894, 1419, 1859, 2015
AlwNI	CAGNNNCTG	1 cut(s)	1808
Ama87I	CYCGRG	2 cut(s)	275, 847
Aor13HI	TCCGGA	1 cut(s)	1444
AoxI	GGCC	4 cut(s)	57, 124, 166, 2039
ApaLI	GTGCAC	1 cut(s)	1709
ApoI	RAATTY	5 cut(s)	380, 422, 890, 1349, 2227
ArsI	GACNNNNNNTTYG	4 cut(s)	671, 701, 703, 733
AsiSI	GCGATCGC	1 cut(s)	1466
Asp700I	GAANNNNTTC	1 cut(s)	670
AspLEI	GCGC	2 cut(s)	23, 242
AspS9I	GGNCC	2 cut(s)	124, 1388
AsuHPI	GGTGA	4 cut(s)	642, 1415, 1595, 2202
AsuII	TTCGAA	1 cut(s)	1645
AvaI	CYCGRG	2 cut(s)	275, 847
AvaII	GGWCC	1 cut(s)	1388
BaeGI	GKGCMC	2 cut(s)	18, 1713
BaeI	ACNNNNGTAYC	2 cut(s)	375, 408
BalI	TGGCCA	2 cut(s)	59, 2041
BamHI	GGATCC	1 cut(s)	196
BanII	GRGCYC	4 cut(s)	696, 996, 1674, 2158
BbsI	GAAGAC	2 cut(s)	673, 739
Bbv12I	GWGCWC	4 cut(s)	696, 996, 1713, 2300
BbvCI	CCTCAGC	1 cut(s)	1119
BccI	CCATC	3 cut(s)	537, 670, 1807
BceAI	ACGGC	2 cut(s)	34, 1038
BcgI	CGANNNNNNTGC	2 cut(s)	540, 574
BciT130I	CCWGG	2 cut(s)	165, 1728
BciVI	GTATCC	1 cut(s)	765
BclI	TGATCA	1 cut(s)	303
BcoDI	GTCTC	2 cut(s)	116, 1988
BfaI	CTAG	5 cut(s)	660, 989, 1115, 1742, 1785
BfmI	CTRYAG	2 cut(s)	1185, 1653
BfuI	GTATCC	1 cut(s)	765
BglII	AGATCT	1 cut(s)	2113
BlpI	GCTNAGC	1 cut(s)	1692
BmcAI	AGTACT	1 cut(s)	2205
Bme1390I	CCNGG	2 cut(s)	165, 1728
Bme18I	GGWCC	1 cut(s)	1388
BmeT110I	CYCGRG	2 cut(s)	275, 847
BmgT120I	GGNCC	2 cut(s)	124, 1388
BmiI	GGNNCC	3 cut(s)	125, 198, 1701
BmrFI	CCNGG	2 cut(s)	165, 1728
BmrI	ACTGGG	1 cut(s)	1928
BmsI	GCATC	6 cut(s)	461, 605, 1438, 1801, 1917, 2004
BmuI	ACTGGG	1 cut(s)	1928
BpiI	GAAGAC	2 cut(s)	673, 739
BplI	GAGNNNNNCTC	2 cut(s)	778, 810
Bpu10I	CCTNAGC	4 cut(s)	983, 1119, 1637, 2136
Bpu1102I	GCTNAGC	1 cut(s)	1692
Bpu14I	TTCGAA	1 cut(s)	1645
BpuEI	CTTGAG	4 cut(s)	980, 989, 1440, 2299
Bsa29I	ATCGAT	1 cut(s)	1863
BsaAI	YACGTR	1 cut(s)	506
BsaHI	GRCGYC	1 cut(s)	416
BsaJI	CCNNGG	2 cut(s)	1606, 1628
BsaWI	WCCGGW	1 cut(s)	1444
BsaXI	ACNNNNNCTCC	2 cut(s)	2187, 2217
Bsc4I	CCNNNNNNNGG	8 cut(s)	164, 359, 1480, 1547, 1687, 1961, 2117, 2264
Bse1I	ACTGG	7 cut(s)	1215, 1362, 1391, 1413, 1421, 1923, 2042
Bse3DI	GCAATG	3 cut(s)	54, 137, 544
BseAI	TCCGGA	1 cut(s)	1444
BseBI	CCWGG	2 cut(s)	165, 1728
BseCI	ATCGAT	1 cut(s)	1863
BseDI	CCNNGG	2 cut(s)	1606, 1628
BseGI	GGATG	6 cut(s)	154, 529, 567, 839, 1453, 1507
BseLI	CCNNNNNNNGG	8 cut(s)	164, 359, 1480, 1547, 1687, 1961, 2117, 2264
BseMI	GCAATG	3 cut(s)	54, 137, 544
BseMII	CTCAG	5 cut(s)	825, 918, 997, 1110, 2127
BseNI	ACTGG	7 cut(s)	1215, 1362, 1391, 1413, 1421, 1923, 2042
BseRI	GAGGAG	4 cut(s)	489, 991, 1340, 2296
BseSI	GKGCMC	2 cut(s)	18, 1713
BseYI	CCCAGC	1 cut(s)	533
Bsh1236I	CGCG	1 cut(s)	242
Bsh1285I	CGRYCG	1 cut(s)	1466
BshFI	GGCC	4 cut(s)	59, 126, 168, 2041
BshVI	ATCGAT	1 cut(s)	1863
BsiEI	CGRYCG	1 cut(s)	1466
BsiHKAI	GWGCWC	4 cut(s)	696, 996, 1713, 2300
BsiHKCI	CYCGRG	2 cut(s)	275, 847
BsiSI	CCGG	2 cut(s)	1445, 1697
BslI	CCNNNNNNNGG	8 cut(s)	164, 359, 1480, 1547, 1687, 1961, 2117, 2264
BsmAI	GTCTC	2 cut(s)	116, 1988
BsmI	GAATGC	1 cut(s)	778
BsnI	GGCC	4 cut(s)	59, 126, 168, 2041
BsoBI	CYCGRG	2 cut(s)	275, 847
Bsp119I	TTCGAA	1 cut(s)	1645
Bsp1286I	GDGCHC	7 cut(s)	18, 696, 996, 1674, 1713, 2158, 2300
Bsp13I	TCCGGA	1 cut(s)	1444
Bsp1407I	TGTACA	1 cut(s)	1014
Bsp1720I	GCTNAGC	1 cut(s)	1692
BspACI	CCGC	4 cut(s)	488, 571, 1984, 2193
BspANI	GGCC	4 cut(s)	59, 126, 168, 2041
BspCNI	CTCAG	5 cut(s)	824, 917, 996, 1111, 2128
BspDI	ATCGAT	1 cut(s)	1863
BspEI	TCCGGA	1 cut(s)	1444
BspFNI	CGCG	1 cut(s)	242
BspLI	GGNNCC	3 cut(s)	125, 198, 1701
BspMAI	CTGCAG	2 cut(s)	1189, 1657
BspPI	GGATC	7 cut(s)	191, 204, 753, 894, 1419, 1859, 2015
BspT104I	TTCGAA	1 cut(s)	1645
BsrBI	CCGCTC	1 cut(s)	1984
BsrDI	GCAATG	3 cut(s)	54, 137, 544
BsrGI	TGTACA	1 cut(s)	1014
BsrI	ACTGG	7 cut(s)	1215, 1362, 1391, 1413, 1421, 1923, 2042
BssECI	CCNNGG	2 cut(s)	1606, 1628
BssNAI	GTATAC	1 cut(s)	1396
BssNI	GRCGYC	1 cut(s)	416
BssT1I	CCWWGG	1 cut(s)	1628
Bst1107I	GTATAC	1 cut(s)	1396
Bst2UI	CCWGG	2 cut(s)	165, 1728
Bst4CI	ACNGT	5 cut(s)	481, 1550, 1715, 1824, 2082
Bst6I	CTCTTC	1 cut(s)	1257
BstACI	GRCGYC	1 cut(s)	416
BstAPI	GCANNNNNTGC	1 cut(s)	1661
BstAUI	TGTACA	1 cut(s)	1014
BstBAI	YACGTR	1 cut(s)	506
BstBI	TTCGAA	1 cut(s)	1645
BstC8I	GCNNGC	7 cut(s)	629, 857, 1027, 1203, 1363, 1889, 1986
BstDEI	CTNAG	7 cut(s)	811, 904, 983, 1119, 1637, 1692, 2136
BstENI	CCTNNNNNAGG	1 cut(s)	1685
BstF5I	GGATG	6 cut(s)	154, 529, 567, 839, 1453, 1507
BstFNI	CGCG	1 cut(s)	242
BstHHI	GCGC	2 cut(s)	23, 242
BstMAI	GTCTC	2 cut(s)	116, 1988
BstMCI	CGRYCG	1 cut(s)	1466
BstMWI	GCNNNNNNNGC	9 cut(s)	1043, 1115, 1124, 1133, 1178, 1187, 1190, 1474, 1661
BstNI	CCWGG	2 cut(s)	165, 1728
BstNSI	RCATGY	2 cut(s)	754, 1891
BstSCI	CCNGG	2 cut(s)	163, 1726
BstSFI	CTRYAG	2 cut(s)	1185, 1653
BstSLI	GKGCMC	2 cut(s)	18, 1713
BstUI	CGCG	1 cut(s)	242
BstV2I	GAAGAC	2 cut(s)	673, 739
BstX2I	RGATCY	2 cut(s)	196, 2113
BstYI	RGATCY	2 cut(s)	196, 2113
BstZ17I	GTATAC	1 cut(s)	1396
Bsu15I	ATCGAT	1 cut(s)	1863
BsuI	GTATCC	1 cut(s)	765
BsuRI	GGCC	4 cut(s)	59, 126, 168, 2041
BsuTUI	ATCGAT	1 cut(s)	1863
BtgZI	GCGATG	2 cut(s)	427, 484
BtsCI	GGATG	6 cut(s)	154, 529, 567, 839, 1453, 1507
BtsI	GCAGTG	2 cut(s)	60, 406
BtsIMutI	CAGTG	8 cut(s)	60, 261, 299, 406, 1037, 1355, 1916, 2087
Cac8I	GCNNGC	7 cut(s)	629, 857, 1027, 1203, 1363, 1889, 1986
CaiI	CAGNNNCTG	1 cut(s)	1808
CfoI	GCGC	2 cut(s)	23, 242
Cfr13I	GGNCC	2 cut(s)	124, 1388
ClaI	ATCGAT	1 cut(s)	1863
CseI	GACGC	2 cut(s)	165, 424
Csp6I	GTAC	9 cut(s)	341, 392, 1015, 1306, 1315, 1546, 1567, 2204, 2289
CspCI	CAANNNNNGTGG	4 cut(s)	36, 71, 1208, 1243
CviAII	CATG	7 cut(s)	146, 209, 751, 1516, 1570, 1888, 1976
CviQI	GTAC	9 cut(s)	341, 392, 1015, 1306, 1315, 1546, 1567, 2204, 2289
DdeI	CTNAG	7 cut(s)	811, 904, 983, 1119, 1637, 1692, 2136
DraIII	CACNNNGTG	1 cut(s)	1922
EaeI	YGGCCR	3 cut(s)	57, 166, 2039
Eam1104I	CTCTTC	1 cut(s)	1257
EarI	CTCTTC	1 cut(s)	1257
EciI	GGCGGA	1 cut(s)	2208
Ecl136II	GAGCTC	2 cut(s)	694, 994
Eco130I	CCWWGG	1 cut(s)	1628
Eco24I	GRGCYC	4 cut(s)	696, 996, 1674, 2158
Eco32I	GATATC	1 cut(s)	1909
Eco47I	GGWCC	1 cut(s)	1388
Eco53kI	GAGCTC	2 cut(s)	694, 994
Eco57I	CTGAAG	3 cut(s)	285, 567, 1281
Eco88I	CYCGRG	2 cut(s)	275, 847
EcoICRI	GAGCTC	2 cut(s)	694, 994
EcoNI	CCTNNNNNAGG	1 cut(s)	1685
EcoRII	CCWGG	2 cut(s)	163, 1726
EcoRV	GATATC	1 cut(s)	1909
EcoT14I	CCWWGG	1 cut(s)	1628
EcoT22I	ATGCAT	1 cut(s)	780
EcoT38I	GRGCYC	4 cut(s)	696, 996, 1674, 2158
ErhI	CCWWGG	1 cut(s)	1628
FaeI	CATG	7 cut(s)	149, 212, 754, 1519, 1573, 1891, 1979
FatI	CATG	7 cut(s)	145, 208, 750, 1515, 1569, 1887, 1975
FauI	CCCGC	1 cut(s)	1977
FauNDI	CATATG	2 cut(s)	1294, 1830
FbaI	TGATCA	1 cut(s)	303
FblI	GTMKAC	2 cut(s)	1395, 2254
FokI	GGATG	6 cut(s)	141, 516, 554, 826, 1460, 1494
FriOI	GRGCYC	4 cut(s)	696, 996, 1674, 2158
FspBI	CTAG	5 cut(s)	660, 989, 1115, 1742, 1785
GlaI	GCGC	2 cut(s)	22, 241
GsaI	CCCAGC	1 cut(s)	537
HaeIII	GGCC	4 cut(s)	59, 126, 168, 2041
HapII	CCGG	2 cut(s)	1445, 1697
HgaI	GACGC	2 cut(s)	165, 424
HhaI	GCGC	2 cut(s)	23, 242
Hin1I	GRCGYC	1 cut(s)	416
Hin1II	CATG	7 cut(s)	149, 212, 754, 1519, 1573, 1891, 1979
Hin6I	GCGC	2 cut(s)	21, 240
HinP1I	GCGC	2 cut(s)	21, 240
HincII	GTYRAC	2 cut(s)	180, 2255
HindII	GTYRAC	2 cut(s)	180, 2255
HindIII	AAGCTT	1 cut(s)	2002
HinfI	GANTC	7 cut(s)	187, 375, 557, 1256, 1969, 2222, 2284
HpaII	CCGG	2 cut(s)	1445, 1697
HphI	GGTGA	4 cut(s)	642, 1415, 1595, 2202
Hpy166II	GTNNAC	6 cut(s)	180, 1317, 1396, 1406, 1711, 2255
Hpy188I	TCNGA	8 cut(s)	374, 547, 601, 814, 1261, 1895, 1906, 2314
Hpy188III	TCNNGA	9 cut(s)	795, 897, 953, 1445, 1541, 1868, 2033, 2219, 2265
Hpy8I	GTNNAC	6 cut(s)	180, 1317, 1396, 1406, 1711, 2255
Hpy99I	CGWCG	2 cut(s)	801, 2168
HpyAV	CCTTC	7 cut(s)	681, 768, 1082, 1370, 1535, 1691, 2116
HpyCH4III	ACNGT	5 cut(s)	481, 1550, 1715, 1824, 2082
HpyCH4IV	ACGT	3 cut(s)	505, 799, 1441
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1043, 1115, 1124, 1133, 1178, 1187, 1190, 1474, 1661
HpyF3I	CTNAG	7 cut(s)	811, 904, 983, 1119, 1637, 1692, 2136
HpySE526I	ACGT	3 cut(s)	505, 799, 1441
Hsp92I	GRCGYC	1 cut(s)	416
Hsp92II	CATG	7 cut(s)	149, 212, 754, 1519, 1573, 1891, 1979
HspAI	GCGC	2 cut(s)	21, 240
Kpn2I	TCCGGA	1 cut(s)	1444
Ksp22I	TGATCA	1 cut(s)	303
LmnI	GCTCC	6 cut(s)	147, 479, 699, 964, 1532, 1581
LweI	GCATC	6 cut(s)	461, 605, 1438, 1801, 1917, 2004
MaeI	CTAG	5 cut(s)	660, 989, 1115, 1742, 1785
MaeII	ACGT	3 cut(s)	505, 799, 1441
MaeIII	GTNAC	6 cut(s)	648, 707, 1275, 1610, 1715, 1816
MbiI	CCGCTC	1 cut(s)	1984
MboII	GAAGA	7 cut(s)	678, 744, 968, 1097, 1274, 1282, 1601
MfeI	CAATTG	2 cut(s)	327, 1320
MflI	RGATCY	2 cut(s)	196, 2113
MhlI	GDGCHC	7 cut(s)	18, 696, 996, 1674, 1713, 2158, 2300
MlsI	TGGCCA	2 cut(s)	59, 2041
MluNI	TGGCCA	2 cut(s)	59, 2041
MlyI	GAGTC	3 cut(s)	1963, 2216, 2293
MmeI	TCCRAC	2 cut(s)	377, 867
Mox20I	TGGCCA	2 cut(s)	59, 2041
Mph1103I	ATGCAT	1 cut(s)	780
MroI	TCCGGA	1 cut(s)	1444
MroXI	GAANNNNTTC	1 cut(s)	670
MscI	TGGCCA	2 cut(s)	59, 2041
MseI	TTAA	6 cut(s)	35, 116, 315, 1068, 1251, 2142
Msp20I	TGGCCA	2 cut(s)	59, 2041
MspA1I	CMGCKG	2 cut(s)	1184, 1844
MspI	CCGG	2 cut(s)	1445, 1697
MspR9I	CCNGG	2 cut(s)	165, 1728
MunI	CAATTG	2 cut(s)	327, 1320
Mva1269I	GAATGC	1 cut(s)	778
MvaI	CCWGG	2 cut(s)	165, 1728
MvnI	CGCG	1 cut(s)	242
MwoI	GCNNNNNNNGC	9 cut(s)	1043, 1115, 1124, 1133, 1178, 1187, 1190, 1474, 1661
NdeI	CATATG	2 cut(s)	1294, 1830
NlaIII	CATG	7 cut(s)	149, 212, 754, 1519, 1573, 1891, 1979
NlaIV	GGNNCC	3 cut(s)	125, 198, 1701
NmuCI	GTSAC	5 cut(s)	648, 707, 1275, 1715, 1816
NsiI	ATGCAT	1 cut(s)	780
NspI	RCATGY	2 cut(s)	754, 1891
NspV	TTCGAA	1 cut(s)	1645
PaeI	GCATGC	1 cut(s)	1891
PaeR7I	CTCGAG	1 cut(s)	275
PciI	ACATGT	1 cut(s)	750
PctI	GAATGC	1 cut(s)	778
PdmI	GAANNNNTTC	1 cut(s)	670
PfeI	GAWTC	4 cut(s)	187, 375, 557, 1256
PflMI	CCANNNNNTGG	3 cut(s)	164, 2117, 2264
Ple19I	CGATCG	1 cut(s)	1466
PleI	GAGTC	3 cut(s)	1963, 2216, 2292
PpsI	GAGTC	3 cut(s)	1963, 2216, 2292
Ppu21I	YACGTR	1 cut(s)	506
PscI	ACATGT	1 cut(s)	750
Psp124BI	GAGCTC	2 cut(s)	696, 996
Psp6I	CCWGG	2 cut(s)	163, 1726
PspFI	CCCAGC	1 cut(s)	533
PspGI	CCWGG	2 cut(s)	163, 1726
PspN4I	GGNNCC	3 cut(s)	125, 198, 1701
PspPI	GGNCC	2 cut(s)	124, 1388
PspXI	VCTCGAGB	1 cut(s)	275
PsrI	GAACNNNNNNTAC	2 cut(s)	333, 365
PstI	CTGCAG	2 cut(s)	1189, 1657
PstNI	CAGNNNCTG	1 cut(s)	1808
PsuI	RGATCY	2 cut(s)	196, 2113
PvuI	CGATCG	1 cut(s)	1466
PvuII	CAGCTG	2 cut(s)	1184, 1844
RgaI	GCGATCGC	1 cut(s)	1466
RsaI	GTAC	9 cut(s)	342, 393, 1016, 1307, 1316, 1547, 1568, 2205, 2290
RsaNI	GTAC	9 cut(s)	341, 392, 1015, 1306, 1315, 1546, 1567, 2204, 2289
SacI	GAGCTC	2 cut(s)	696, 996
SalI	GTCGAC	1 cut(s)	2253
SaqAI	TTAA	6 cut(s)	35, 116, 315, 1068, 1251, 2142
Sau96I	GGNCC	2 cut(s)	124, 1388
ScaI	AGTACT	1 cut(s)	2205
SchI	GAGTC	3 cut(s)	1963, 2216, 2293
ScrFI	CCNGG	2 cut(s)	165, 1728
SduI	GDGCHC	7 cut(s)	18, 696, 996, 1674, 1713, 2158, 2300
SfaAI	GCGATCGC	1 cut(s)	1466
SfaNI	GCATC	6 cut(s)	461, 605, 1438, 1801, 1917, 2004
SfcI	CTRYAG	2 cut(s)	1185, 1653
Sfr274I	CTCGAG	1 cut(s)	275
SfuI	TTCGAA	1 cut(s)	1645
SgfI	GCGATCGC	1 cut(s)	1466
SinI	GGWCC	1 cut(s)	1388
SlaI	CTCGAG	1 cut(s)	275
SmlI	CTYRAG	5 cut(s)	275, 968, 995, 1455, 2278
SmoI	CTYRAG	5 cut(s)	275, 968, 995, 1455, 2278
SphI	GCATGC	1 cut(s)	1891
SsiI	CCGC	4 cut(s)	488, 571, 1984, 2193
SspMI	CTAG	5 cut(s)	660, 989, 1115, 1742, 1785
SstI	GAGCTC	2 cut(s)	696, 996
StyD4I	CCNGG	2 cut(s)	163, 1726
StyI	CCWWGG	1 cut(s)	1628
TaaI	ACNGT	5 cut(s)	481, 1550, 1715, 1824, 2082
TaiI	ACGT	3 cut(s)	508, 802, 1444
TaqI	TCGA	7 cut(s)	276, 674, 796, 1645, 1863, 2254, 2294
TaqII	GACCGA	1 cut(s)	2121
TatI	WGTACW	4 cut(s)	1014, 1314, 1566, 2203
TfiI	GAWTC	4 cut(s)	187, 375, 557, 1256
Tru1I	TTAA	6 cut(s)	35, 116, 315, 1068, 1251, 2142
Tru9I	TTAA	6 cut(s)	35, 116, 315, 1068, 1251, 2142
TscAI	CASTG	8 cut(s)	60, 268, 306, 406, 1044, 1362, 1923, 2087
TseFI	GTSAC	5 cut(s)	648, 707, 1275, 1715, 1816
Tsp45I	GTSAC	5 cut(s)	648, 707, 1275, 1715, 1816
TspDTI	ATGAA	5 cut(s)	556, 654, 1077, 1256, 1673
TspGWI	ACGGA	3 cut(s)	197, 833, 840
TspRI	CASTG	8 cut(s)	60, 268, 306, 406, 1044, 1362, 1923, 2087
Van91I	CCANNNNNTGG	3 cut(s)	164, 2117, 2264
VneI	GTGCAC	1 cut(s)	1709
VpaK11BI	GGWCC	1 cut(s)	1388
XagI	CCTNNNNNAGG	1 cut(s)	1685
XapI	RAATTY	5 cut(s)	380, 422, 890, 1349, 2227
XceI	RCATGY	2 cut(s)	754, 1891
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1957
XhoI	CTCGAG	1 cut(s)	275
XmiI	GTMKAC	2 cut(s)	1395, 2254
XmnI	GAANNNNTTC	1 cut(s)	670
XspI	CTAG	5 cut(s)	660, 989, 1115, 1742, 1785
ZrmI	AGTACT	1 cut(s)	2205
Zsp2I	ATGCAT	1 cut(s)	780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.