Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0010342

Physical Location & Seq

Genomic Coordinates Forward (+)

24636744 .. 24641472

Gene Structure 4729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1203600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGTCATCCGGGTCAAGTTCTCTAATGTGGTTCCGGAAGGGCCTCAGGATCCACGACAACCCGGCCCTCGAGTACGCCTCCAAAGGCTCCGATTTTTTATACCCGGTATTCGTGATCGACCCGCACTACATGAAGCCCGACGCGGACGCTTTCTCACCCGGGTCATCGAAAGCCGGCCTTAATCGGATCCGGTTCCTGCTCGAGAGCCTTTCGGATTTGGATTCGAACCTCAAAAAGCTCGGGTCCAGATTGTTGGTGCTCAAAGGTGAACCCAGCGAGGTCCTCAATCGTTGCCTGAAGGAGTGGGATGTGAAAAGGCTTTGCTTTGAGTACGATACAGAACCATATTATCAAGCTCTAGATGTTAAAGTTAAGGGGTATGCATCTGCGGCTGGCATTGAGGTTTTTAGTCCCGTAAGTCATACGCTCTTCAATCCGGCGGATATTATACGAAGGAATGGTGGCAGGCCACCTTTGACTTATCAATCATTTGTGAAGCTTGTTGGGGATCCCTCATGGGCATCGTCCCCTCTTTCTATTACACTTTCTTCACTTCCTCCAATTGGGAGTTTTGGAAGATGTGAGATTTCAGAAGTTCCAACAGTTGAAGAACTTGGCTATGAAGAGACACAACAGGACGAACATTCTCCCTTTAAAGGTGGTGAATCAGAAGCCTTGAAGAAGTTACGAGAATCAATTGAAAAGAAGGAGTGGGTGGCAAATTTCGAAAAACCTAAGGGTGATCCATCAGCGTTTTTAACCCCGGCAACTACTGTTTTATCTCCTTACTTGAAATTTGGTTGTCTCTCTTCAAGATATTTCTACATATGCCTTCAAGATTTATATAAAAATGTAAAAAGTCATACTTCACCACCGGTATCTCTTGCTGGACAGTTATTATGGCGAGACTTTTTCTACACGGTTGCATTTGGCACTCCTAATTTCGATCGGATGAGGGGAAACAAAATATGCAAGCAGATACCTTGGAATGATGATGATGAACTGCTGCAAGCTTGGAGGGAAGCTAGAACAGGATTCCCTTGGATCGATGCCATCATGATCCAGCTCCGTAAGTGGGGTTGGATGCACCATCTAGCACGACACTCTGTTGCATGTTTTTTGACTCGGGGTGATCTGTTTGTTCACTGGGAAAAAGGCCGTGATGTTTTCGAGAGGCTTCTGATTGATTCAGACTGGGCAATTAATAATGGAAACTGGCTATGGCTATCGTGCTCATCATTTTTCTACCAGTATAACCGCATCTACTCTCCAACCTCGTTTGGAAAGAAGTACGACCCAAATGGGGATTACATTAGACATTTTCTCCCCGTACTTAAAGAAATGCCAAAGGAGTACATTTATGAGCCATGGACGGCTCCTGAAAGCATTCAGAAAAAGGCAAAGTGTATAATCGGAAGAGATTATCCAAAGCCAGTGGTTGCTCACGATTCTGCAAGCAAGGAGTGCAAGAGGAGAATGGCTGAAGCATATGCATTGAACCAGAAGTTGACTGGCTTGGTGAGCGAAGAAGATTTAAGAAACTTGAGGAGAAAACTGGAGAAGGACGAAAAGCCAGAGGTAAAAAATAAACGGCAAAGAAAGCTAATTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003913 GO:0003914 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0016829 GO:0016830 GO:0050896 GO:0140097

KEGG Pathways

Metabolic & Signaling

ko04710 map04710

Pfam Domains

Protein Families

DNA_photolyase FAD_binding_7

Protein Analysis

538

Amino Acids

61.73

Weight (kDa)

8.82

Isoelectric Point (pI)

52.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_photolyase	PF00875	7 - 167	1.7e-43	DNA photolyase
FAD_binding_7	PF03441	297 - 494	8.7e-76	FAD binding domain of DNA photolyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15620 AT3G15620
fragaria_vesca	FvH4_6g30470 FvH4_6g30470 FvH4_6g30470 FvH4_6g30470 FvH4_6g30470
malus_domestica	MD17G1203600.v1.1
prunus_persica	Prupe.3G078500_v2.0.a1
pyrus_communis	pycom17g20720
rosa_chinensis	RchiOBHm_Chr2g0136821
rosa_laevigata	RLG00000019580
rosa_multiflora	Rmu_sc0001299.1_g000012 Rmu_sc0005272.1_g000003
rosa_roxburghii	Rroxscaffold_2G00107960
rosa_rugosa	Rorug02G0334100 Rorug02G0334200 Rorug02G0334300
rosa_samantha	Rh2AG384400 Rh2DG407900
rosa_wichuraiana	Rw2G031440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	143
AccIII	TCCGGA	1 cut(s)	33
AciI	CCGC	5 cut(s)	122, 143, 389, 440, 1258
AclWI	GGATC	9 cut(s)	43, 56, 181, 194, 503, 516, 737, 1052, 1054
AcsI	RAATTY	2 cut(s)	721, 794
AcuI	CTGAAG	2 cut(s)	317, 1503
AfaI	GTAC	5 cut(s)	74, 332, 1292, 1332, 1355
AfiI	CCNNNNNNNGG	4 cut(s)	563, 656, 1075, 1303
AgeI	ACCGGT	1 cut(s)	874
AgsI	TTSAA	8 cut(s)	433, 608, 679, 701, 793, 813, 836, 1498
AluBI	AGCT	7 cut(s)	238, 356, 499, 1013, 1025, 1066, 1603
AluI	AGCT	7 cut(s)	238, 356, 499, 1013, 1025, 1066, 1603
Alw21I	GWGCWC	2 cut(s)	261, 1235
Alw26I	GTCTC	3 cut(s)	620, 809, 900
AlwI	GGATC	9 cut(s)	43, 56, 181, 194, 503, 516, 737, 1052, 1054
Ama87I	CYCGRG	5 cut(s)	68, 158, 200, 239, 1125
Aor13HI	TCCGGA	1 cut(s)	33
AoxI	GGCC	5 cut(s)	40, 63, 175, 467, 1156
ApeKI	GCWGC	1 cut(s)	1006
ApoI	RAATTY	2 cut(s)	721, 794
AseI	ATTAAT	1 cut(s)	1203
AsiGI	ACCGGT	1 cut(s)	874
Asp700I	GAANNNNTTC	1 cut(s)	1386
AspS9I	GGNCC	4 cut(s)	40, 64, 243, 280
AsuC2I	CCSGG	6 cut(s)	10, 62, 104, 159, 160, 764
AsuHPI	GGTGA	7 cut(s)	147, 278, 674, 752, 861, 1142, 1531
AsuII	TTCGAA	2 cut(s)	224, 726
AvaI	CYCGRG	5 cut(s)	68, 158, 200, 239, 1125
AvaII	GGWCC	2 cut(s)	243, 280
AxyI	CCTNAGG	2 cut(s)	44, 735
BamHI	GGATCC	3 cut(s)	48, 186, 508
Bbv12I	GWGCWC	2 cut(s)	261, 1235
BbvI	GCAGC	1 cut(s)	993
BccI	CCATC	3 cut(s)	754, 1061, 1098
BceAI	ACGGC	3 cut(s)	1143, 1389, 1607
BcnI	CCSGG	6 cut(s)	10, 62, 104, 159, 160, 764
BcoDI	GTCTC	3 cut(s)	620, 809, 900
BfaI	CTAG	3 cut(s)	359, 1026, 1094
BisI	GCNGC	2 cut(s)	390, 1007
BlsI	GCNGC	2 cut(s)	391, 1008
Bme1390I	CCNGG	6 cut(s)	10, 62, 104, 159, 160, 764
Bme18I	GGWCC	2 cut(s)	243, 280
BmeT110I	CYCGRG	5 cut(s)	68, 158, 200, 239, 1125
BmgT120I	GGNCC	4 cut(s)	40, 64, 243, 280
BmiI	GGNNCC	8 cut(s)	32, 50, 88, 188, 194, 244, 510, 1377
BmrFI	CCNGG	6 cut(s)	10, 62, 104, 159, 160, 764
BmrI	ACTGGG	2 cut(s)	1156, 1204
BmsI	GCATC	5 cut(s)	392, 530, 1039, 1074, 1269
BmuI	ACTGGG	2 cut(s)	1156, 1204
BplI	GAGNNNNNCTC	2 cut(s)	62, 94
BpmI	CTGGAG	1 cut(s)	1577
Bpu14I	TTCGAA	2 cut(s)	224, 726
BpuEI	CTTGAG	1 cut(s)	1564
BpuMI	CCSGG	6 cut(s)	10, 62, 104, 159, 160, 764
Bsa29I	ATCGAT	1 cut(s)	1047
BsaJI	CCNNGG	5 cut(s)	158, 762, 983, 1040, 1367
BsaWI	WCCGGW	3 cut(s)	33, 189, 874
BsaXI	ACNNNNNCTCC	2 cut(s)	1308, 1338
Bsc4I	CCNNNNNNNGG	4 cut(s)	563, 656, 1075, 1303
Bse118I	RCCGGY	2 cut(s)	173, 874
Bse1I	ACTGG	7 cut(s)	1151, 1199, 1220, 1249, 1433, 1516, 1560
Bse21I	CCTNAGG	2 cut(s)	44, 735
BseAI	TCCGGA	1 cut(s)	33
BseCI	ATCGAT	1 cut(s)	1047
BseDI	CCNNGG	5 cut(s)	158, 762, 983, 1040, 1367
BseGI	GGATG	4 cut(s)	5, 313, 957, 1089
BseLI	CCNNNNNNNGG	4 cut(s)	563, 656, 1075, 1303
BseMII	CTCAG	1 cut(s)	58
BseNI	ACTGG	7 cut(s)	1151, 1199, 1220, 1249, 1433, 1516, 1560
BseRI	GAGGAG	2 cut(s)	1486, 1561
BseXI	GCAGC	1 cut(s)	993
BseYI	CCCAGC	1 cut(s)	272
Bsh1236I	CGCG	1 cut(s)	143
Bsh1285I	CGRYCG	1 cut(s)	949
BshFI	GGCC	5 cut(s)	42, 65, 177, 469, 1158
BshTI	ACCGGT	1 cut(s)	874
BshVI	ATCGAT	1 cut(s)	1047
BsiEI	CGRYCG	1 cut(s)	949
BsiHKAI	GWGCWC	2 cut(s)	261, 1235
BsiHKCI	CYCGRG	5 cut(s)	68, 158, 200, 239, 1125
BslFI	GGGAC	2 cut(s)	396, 511
BslI	CCNNNNNNNGG	4 cut(s)	563, 656, 1075, 1303
BsmAI	GTCTC	3 cut(s)	620, 809, 900
BsmFI	GGGAC	2 cut(s)	396, 511
BsmI	GAATGC	1 cut(s)	1386
BsnI	GGCC	5 cut(s)	42, 65, 177, 469, 1158
BsoBI	CYCGRG	5 cut(s)	68, 158, 200, 239, 1125
Bsp119I	TTCGAA	2 cut(s)	224, 726
Bsp1286I	GDGCHC	2 cut(s)	261, 1235
Bsp13I	TCCGGA	1 cut(s)	33
Bsp143I	GATC	9 cut(s)	48, 114, 186, 508, 742, 946, 1044, 1059, 1132
Bsp19I	CCATGG	1 cut(s)	1367
BspACI	CCGC	5 cut(s)	122, 143, 389, 440, 1258
BspANI	GGCC	5 cut(s)	42, 65, 177, 469, 1158
BspCNI	CTCAG	1 cut(s)	57
BspDI	ATCGAT	1 cut(s)	1047
BspEI	TCCGGA	1 cut(s)	33
BspFNI	CGCG	1 cut(s)	143
BspHI	TCATGA	1 cut(s)	1056
BspLI	GGNNCC	8 cut(s)	32, 50, 88, 188, 194, 244, 510, 1377
BspPI	GGATC	9 cut(s)	43, 56, 181, 194, 503, 516, 737, 1052, 1054
BspQI	GCTCTTC	1 cut(s)	434
BspT104I	TTCGAA	2 cut(s)	224, 726
BsrFI	RCCGGY	2 cut(s)	173, 874
BsrI	ACTGG	7 cut(s)	1151, 1199, 1220, 1249, 1433, 1516, 1560
BssAI	RCCGGY	2 cut(s)	173, 874
BssECI	CCNNGG	5 cut(s)	158, 762, 983, 1040, 1367
BssMI	GATC	9 cut(s)	48, 114, 186, 508, 742, 946, 1044, 1059, 1132
BssT1I	CCWWGG	3 cut(s)	983, 1040, 1367
Bst4CI	ACNGT	4 cut(s)	604, 775, 894, 922
Bst6I	CTCTTC	4 cut(s)	434, 618, 814, 1411
BstAPI	GCANNNNNTGC	1 cut(s)	1464
BstBI	TTCGAA	2 cut(s)	224, 726
BstC8I	GCNNGC	6 cut(s)	175, 394, 467, 974, 1011, 1456
BstDEI	CTNAG	2 cut(s)	44, 735
BstDSI	CCRYGG	1 cut(s)	1367
BstF5I	GGATG	4 cut(s)	5, 313, 957, 1089
BstFNI	CGCG	1 cut(s)	143
BstKTI	GATC	9 cut(s)	51, 117, 189, 511, 745, 949, 1047, 1062, 1135
BstMAI	GTCTC	3 cut(s)	620, 809, 900
BstMBI	GATC	9 cut(s)	48, 114, 186, 508, 742, 946, 1044, 1059, 1132
BstMCI	CGRYCG	1 cut(s)	949
BstMWI	GCNNNNNNNGC	4 cut(s)	389, 1464, 1521, 1600
BstNSI	RCATGY	1 cut(s)	1116
BstSCI	CCNGG	6 cut(s)	8, 60, 102, 157, 158, 762
BstUI	CGCG	1 cut(s)	143
BstV1I	GCAGC	1 cut(s)	993
BstX2I	RGATCY	3 cut(s)	48, 186, 508
BstXI	CCANNNNNNTGG	1 cut(s)	253
BstYI	RGATCY	3 cut(s)	48, 186, 508
Bsu15I	ATCGAT	1 cut(s)	1047
Bsu36I	CCTNAGG	2 cut(s)	44, 735
BsuRI	GGCC	5 cut(s)	42, 65, 177, 469, 1158
BsuTUI	ATCGAT	1 cut(s)	1047
BtgI	CCRYGG	1 cut(s)	1367
BtsCI	GGATG	4 cut(s)	5, 313, 957, 1089
BtsIMutI	CAGTG	2 cut(s)	1144, 1440
Cac8I	GCNNGC	6 cut(s)	175, 394, 467, 974, 1011, 1456
CciI	TCATGA	1 cut(s)	1056
Cfr10I	RCCGGY	2 cut(s)	173, 874
Cfr13I	GGNCC	4 cut(s)	40, 64, 243, 280
Cfr9I	CCCGGG	1 cut(s)	158
ClaI	ATCGAT	1 cut(s)	1047
CseI	GACGC	2 cut(s)	149, 155
Csp6I	GTAC	5 cut(s)	73, 331, 1291, 1331, 1354
CspAI	ACCGGT	1 cut(s)	874
CspCI	CAANNNNNGTGG	2 cut(s)	1416, 1451
CviAII	CATG	5 cut(s)	130, 516, 1057, 1113, 1368
CviQI	GTAC	5 cut(s)	73, 331, 1291, 1331, 1354
DdeI	CTNAG	2 cut(s)	44, 735
DpnI	GATC	9 cut(s)	50, 116, 188, 510, 744, 948, 1046, 1061, 1134
DpnII	GATC	9 cut(s)	48, 114, 186, 508, 742, 946, 1044, 1059, 1132
DraI	TTTAAA	1 cut(s)	655
Eam1104I	CTCTTC	4 cut(s)	434, 618, 814, 1411
EarI	CTCTTC	4 cut(s)	434, 618, 814, 1411
EciI	GGCGGA	1 cut(s)	455
Eco130I	CCWWGG	3 cut(s)	983, 1040, 1367
Eco47I	GGWCC	2 cut(s)	243, 280
Eco57I	CTGAAG	2 cut(s)	317, 1503
Eco81I	CCTNAGG	2 cut(s)	44, 735
Eco88I	CYCGRG	5 cut(s)	68, 158, 200, 239, 1125
EcoO109I	RGGNCCY	2 cut(s)	40, 280
EcoT14I	CCWWGG	3 cut(s)	983, 1040, 1367
EcoT22I	ATGCAT	2 cut(s)	385, 1495
ErhI	CCWWGG	3 cut(s)	983, 1040, 1367
FaeI	CATG	5 cut(s)	133, 519, 1060, 1116, 1371
FalI	AAGNNNNNCTT	4 cut(s)	162, 194, 850, 882
FaqI	GGGAC	2 cut(s)	396, 511
FatI	CATG	5 cut(s)	129, 515, 1056, 1112, 1367
FauI	CCCGC	1 cut(s)	129
FauNDI	CATATG	2 cut(s)	827, 1489
Fnu4HI	GCNGC	2 cut(s)	390, 1007
FokI	GGATG	3 cut(s)	320, 964, 1096
Fsp4HI	GCNGC	2 cut(s)	390, 1007
FspBI	CTAG	3 cut(s)	359, 1026, 1094
GluI	GCNGC	2 cut(s)	390, 1007
GsaI	CCCAGC	1 cut(s)	276
GsuI	CTGGAG	1 cut(s)	1577
HaeIII	GGCC	5 cut(s)	42, 65, 177, 469, 1158
HgaI	GACGC	2 cut(s)	149, 155
Hin1II	CATG	5 cut(s)	133, 519, 1060, 1116, 1371
HincII	GTYRAC	1 cut(s)	1509
HindII	GTYRAC	1 cut(s)	1509
HindIII	AAGCTT	2 cut(s)	497, 1011
HinfI	GANTC	7 cut(s)	221, 665, 692, 1035, 1123, 1187, 1448
HphI	GGTGA	7 cut(s)	147, 278, 674, 752, 861, 1142, 1531
Hpy166II	GTNNAC	3 cut(s)	269, 1144, 1509
Hpy8I	GTNNAC	3 cut(s)	269, 1144, 1509
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	6 cut(s)	31, 292, 447, 700, 842, 1555
HpyCH4III	ACNGT	4 cut(s)	604, 775, 894, 922
HpyCH4V	TGCA	9 cut(s)	383, 926, 972, 1009, 1087, 1112, 1454, 1467, 1493
HpyF10VI	GCNNNNNNNGC	4 cut(s)	389, 1464, 1521, 1600
HpyF3I	CTNAG	2 cut(s)	44, 735
Hsp92II	CATG	5 cut(s)	133, 519, 1060, 1116, 1371
Kpn2I	TCCGGA	1 cut(s)	33
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
Kzo9I	GATC	9 cut(s)	48, 114, 186, 508, 742, 946, 1044, 1059, 1132
LguI	GCTCTTC	1 cut(s)	434
LmnI	GCTCC	3 cut(s)	92, 1071, 1381
Lsp1109I	GCAGC	1 cut(s)	993
LweI	GCATC	5 cut(s)	392, 530, 1039, 1074, 1269
MaeI	CTAG	3 cut(s)	359, 1026, 1094
MaeIII	GTNAC	1 cut(s)	684
MalI	GATC	9 cut(s)	50, 116, 188, 510, 744, 948, 1046, 1061, 1134
MboI	GATC	9 cut(s)	48, 114, 186, 508, 742, 946, 1044, 1059, 1132
MfeI	CAATTG	2 cut(s)	561, 696
MflI	RGATCY	3 cut(s)	48, 186, 508
MhlI	GDGCHC	2 cut(s)	261, 1235
MluCI	AATT	7 cut(s)	561, 696, 721, 794, 940, 1200, 1605
MlyI	GAGTC	1 cut(s)	1117
MmeI	TCCRAC	3 cut(s)	623, 1061, 1295
Mph1103I	ATGCAT	2 cut(s)	385, 1495
MroI	TCCGGA	1 cut(s)	33
MroNI	GCCGGC	1 cut(s)	173
MroXI	GAANNNNTTC	1 cut(s)	1386
MseI	TTAA	8 cut(s)	180, 366, 372, 654, 758, 1203, 1335, 1535
MspR9I	CCNGG	6 cut(s)	10, 62, 104, 159, 160, 764
MunI	CAATTG	2 cut(s)	561, 696
Mva1269I	GAATGC	1 cut(s)	1386
MvnI	CGCG	1 cut(s)	143
MwoI	GCNNNNNNNGC	4 cut(s)	389, 1464, 1521, 1600
NaeI	GCCGGC	1 cut(s)	175
NciI	CCSGG	6 cut(s)	10, 62, 104, 159, 160, 764
NcoI	CCATGG	1 cut(s)	1367
NdeI	CATATG	2 cut(s)	827, 1489
NdeII	GATC	9 cut(s)	48, 114, 186, 508, 742, 946, 1044, 1059, 1132
NgoMIV	GCCGGC	1 cut(s)	173
NlaIII	CATG	5 cut(s)	133, 519, 1060, 1116, 1371
NlaIV	GGNNCC	8 cut(s)	32, 50, 88, 188, 194, 244, 510, 1377
NsiI	ATGCAT	2 cut(s)	385, 1495
NspI	RCATGY	1 cut(s)	1116
NspV	TTCGAA	2 cut(s)	224, 726
PaeR7I	CTCGAG	2 cut(s)	68, 200
PagI	TCATGA	1 cut(s)	1056
PciSI	GCTCTTC	1 cut(s)	434
PctI	GAATGC	1 cut(s)	1386
PdiI	GCCGGC	1 cut(s)	175
PdmI	GAANNNNTTC	1 cut(s)	1386
PfeI	GAWTC	6 cut(s)	221, 665, 692, 1035, 1187, 1448
PinAI	ACCGGT	1 cut(s)	874
PkrI	GCNGC	2 cut(s)	391, 1008
Ple19I	CGATCG	1 cut(s)	949
PleI	GAGTC	1 cut(s)	1117
PpsI	GAGTC	1 cut(s)	1117
PpuMI	RGGWCCY	1 cut(s)	280
PshBI	ATTAAT	1 cut(s)	1203
Psp5II	RGGWCCY	1 cut(s)	280
PspFI	CCCAGC	1 cut(s)	272
PspN4I	GGNNCC	8 cut(s)	32, 50, 88, 188, 194, 244, 510, 1377
PspPI	GGNCC	4 cut(s)	40, 64, 243, 280
PspPPI	RGGWCCY	1 cut(s)	280
PspXI	VCTCGAGB	1 cut(s)	68
PsuI	RGATCY	3 cut(s)	48, 186, 508
PvuI	CGATCG	1 cut(s)	949
RsaI	GTAC	5 cut(s)	74, 332, 1292, 1332, 1355
RsaNI	GTAC	5 cut(s)	73, 331, 1291, 1331, 1354
SapI	GCTCTTC	1 cut(s)	434
SaqAI	TTAA	8 cut(s)	180, 366, 372, 654, 758, 1203, 1335, 1535
SatI	GCNGC	2 cut(s)	390, 1007
Sau3AI	GATC	9 cut(s)	48, 114, 186, 508, 742, 946, 1044, 1059, 1132
Sau96I	GGNCC	4 cut(s)	40, 64, 243, 280
SchI	GAGTC	1 cut(s)	1117
ScrFI	CCNGG	6 cut(s)	10, 62, 104, 159, 160, 764
SduI	GDGCHC	2 cut(s)	261, 1235
SfaNI	GCATC	5 cut(s)	392, 530, 1039, 1074, 1269
Sfr274I	CTCGAG	2 cut(s)	68, 200
SfuI	TTCGAA	2 cut(s)	224, 726
SinI	GGWCC	2 cut(s)	243, 280
SlaI	CTCGAG	2 cut(s)	68, 200
SmaI	CCCGGG	1 cut(s)	160
SmlI	CTYRAG	3 cut(s)	68, 200, 1543
SmoI	CTYRAG	3 cut(s)	68, 200, 1543
Sse9I	AATT	7 cut(s)	561, 696, 721, 794, 940, 1200, 1605
SsiI	CCGC	5 cut(s)	122, 143, 389, 440, 1258
SspMI	CTAG	3 cut(s)	359, 1026, 1094
StyD4I	CCNGG	6 cut(s)	8, 60, 102, 157, 158, 762
StyI	CCWWGG	3 cut(s)	983, 1040, 1367
TaaI	ACNGT	4 cut(s)	604, 775, 894, 922
TaqI	TCGA	9 cut(s)	69, 117, 167, 201, 224, 726, 945, 1047, 1170
TasI	AATT	7 cut(s)	561, 696, 721, 794, 940, 1200, 1605
TatI	WGTACW	1 cut(s)	1353
TauI	GCSGC	1 cut(s)	392
TfiI	GAWTC	6 cut(s)	221, 665, 692, 1035, 1187, 1448
Tru1I	TTAA	8 cut(s)	180, 366, 372, 654, 758, 1203, 1335, 1535
Tru9I	TTAA	8 cut(s)	180, 366, 372, 654, 758, 1203, 1335, 1535
TscAI	CASTG	2 cut(s)	1151, 1440
TseI	GCWGC	1 cut(s)	1006
TspDTI	ATGAA	3 cut(s)	146, 636, 1014
TspGWI	ACGGA	1 cut(s)	1058
TspMI	CCCGGG	1 cut(s)	158
TspRI	CASTG	2 cut(s)	1151, 1440
VpaK11BI	GGWCC	2 cut(s)	243, 280
VspI	ATTAAT	1 cut(s)	1203
XapI	RAATTY	2 cut(s)	721, 794
XbaI	TCTAGA	1 cut(s)	358
XceI	RCATGY	1 cut(s)	1116
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1508
XhoI	CTCGAG	2 cut(s)	68, 200
XmaI	CCCGGG	1 cut(s)	158
XmnI	GAANNNNTTC	1 cut(s)	1386
XspI	CTAG	3 cut(s)	359, 1026, 1094
Zsp2I	ATGCAT	2 cut(s)	385, 1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.