Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005272.1

Orthogroup ID

OG0010342

Physical Location & Seq

Genomic Coordinates Reverse (-)

5608 .. 10968

Gene Structure 5361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005272.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

atgtcatccgggtcgggttctctgatgtggttccgcaagggcctgaggatccacgacaaccctgctctcgagcacgcctccaaggcctccaatttcctctacccggtcttcgtcatcgacccgcactacatgaagcccgacccgaccgcaccctcccccgggtcgtccaaggccggcctgaaccggatccggttcctgctccagagtctggtcgatttggatttgagcctcaagaagctcgggtccagattgttggtgcttaaaggcgaccccagcgaggtcatcgttcgctgccttaaggagtgggatgtgaaaaagctttgctttgagtatgatactgaaccatattaccaagctctagatgttaaagtcaagggattcgcatccgctgctgggattgaggttttcagtcctgtaagtcatacgctgttcaatcctgcggagattatacagaagaatgggggaaggccacctttgagttatcaatcatttgtaaagcttgctggggaaccctcgtggatatccacgcctctttctatgacgctttcttcacttcctccggttgggaatgttgcgaattgtgaggtttcagaagttccgactgttgaagaacttggttatgaagtggctcaacagggtgaattttctccttttagaggtggtgagtcagaagccttgaagaggttaagacaatcaatcgaaaaaaaggagtgggtggcaaacttcgagaaacctaagggtgatccatctgcatttctaaagccagcaacaactgttttatcaccttatttgaaatttggttgtctctcttctagatacttttacacatgccttcaagatgtacagaaaaatgtcaaaaggcatacattacccccagtatctcttgctggacagttattatggcgagagtttttctacacagtggcatttggcactcctaattttgaccagatgcgggggaacaaaatatgcaagcagataccttggaatgatgatgataaattgctggcagcttggagggaggctagaacaggatacccttggatcgatgctatcatgacccagctcctcaagtggggatggatgcaccatctagcacgacattctgttgcatgttttttaactcgtggtgatttgtttgttcactgggaaaaagggcgtgatgtttttgagaggctgctgattgattcagattgggcaatcaataatggaaactggctatggctatcatgctcatcatttttctaccagtataaccgtatctactccccaatctcgtttggaaagaagtatgacccaaatggtgattacattagacagtttctccctgtacttaaagatatgccaaaggagtacatttatgagccatggacagctcctctgagcattcagaacaaagcaaagtgcataattggaagagattatccaaagccagtggtttatcatgattctgcaagcaaagagtgcaagaagaaaatggctgaagcatatgcattgaaccggaagttgacaagctcggtgagcgaagaagatctaataaacttaagaagaaaactggaggaagaccaaaagccagagagagagagagagagagagaccataggagacttcgccgaagtctcgtcactggtcactggtcgccggattccagttaacttcgccggaattcgatcactggtcgctgcccgctggacttttttgaaaacctcgccggaggtccccaaagaggtctccgaaaatgtttattgccccttaatagacgtctattgcccaccaatagaggggcaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003913 GO:0003914 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0016829 GO:0016830 GO:0050896 GO:0140097

KEGG Pathways

Metabolic & Signaling

ko04710 map04710

Pfam Domains

Protein Families

DNA_photolyase FAD_binding_7

Protein Analysis

596

Amino Acids

67.95

Weight (kDa)

8.68

Isoelectric Point (pI)

48.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15620 AT3G15620
fragaria_vesca	FvH4_6g30470 FvH4_6g30470 FvH4_6g30470 FvH4_6g30470 FvH4_6g30470
malus_domestica	MD17G1203600.v1.1
prunus_persica	Prupe.3G078500_v2.0.a1
pyrus_communis	pycom17g20720
rosa_chinensis	RchiOBHm_Chr2g0136821
rosa_laevigata	RLG00000019580
rosa_multiflora	Rmu_sc0001299.1_g000012 Rmu_sc0005272.1_g000003
rosa_roxburghii	Rroxscaffold_2G00107960
rosa_rugosa	Rorug02G0334100 Rorug02G0334200 Rorug02G0334300
rosa_samantha	Rh2AG384400 Rh2DG407900
rosa_wichuraiana	Rw2G031440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1764
AccB7I	CCANNNNNTGG	1 cut(s)	208
AciI	CCGC	7 cut(s)	34, 122, 147, 387, 440, 955, 1687
AclWI	GGATC	6 cut(s)	43, 56, 181, 194, 737, 1052
AcsI	RAATTY	3 cut(s)	641, 794, 1665
AcuI	CTGAAG	1 cut(s)	1503
AcyI	GRCGYC	1 cut(s)	1761
AfaI	GTAC	3 cut(s)	843, 1332, 1355
AflII	CTTAAG	2 cut(s)	296, 1543
AgsI	TTSAA	7 cut(s)	433, 608, 679, 793, 836, 1498, 1702
AluBI	AGCT	8 cut(s)	238, 319, 356, 499, 1013, 1066, 1376, 1515
AluI	AGCT	8 cut(s)	238, 319, 356, 499, 1013, 1066, 1376, 1515
Alw21I	GWGCWC	1 cut(s)	75
Alw26I	GTCTC	5 cut(s)	809, 1589, 1599, 1624, 1735
AlwI	GGATC	6 cut(s)	43, 56, 181, 194, 737, 1052
AlwNI	CAGNNNCTG	1 cut(s)	208
Ama87I	CYCGRG	3 cut(s)	68, 158, 239
AoxI	GGCC	5 cut(s)	40, 84, 171, 175, 467
ApeKI	GCWGC	5 cut(s)	291, 389, 1010, 1177, 1682
ApoI	RAATTY	3 cut(s)	641, 794, 1665
AspS9I	GGNCC	3 cut(s)	40, 243, 1717
AsuC2I	CCSGG	4 cut(s)	10, 104, 159, 160
AsuHPI	GGTGA	7 cut(s)	650, 674, 752, 774, 1142, 1316, 1531
AvaI	CYCGRG	3 cut(s)	68, 158, 239
AvaII	GGWCC	2 cut(s)	243, 1717
AxyI	CCTNAGG	2 cut(s)	44, 735
BamHI	GGATCC	2 cut(s)	48, 186
BauI	CACGAG	2 cut(s)	514, 1125
BbsI	GAAGAC	2 cut(s)	100, 1569
Bbv12I	GWGCWC	1 cut(s)	75
BbvI	GCAGC	5 cut(s)	278, 376, 1022, 1164, 1669
BccI	CCATC	3 cut(s)	754, 1074, 1098
BcgI	CGANNNNNNTGC	2 cut(s)	44, 78
BciVI	GTATCC	1 cut(s)	1028
BcnI	CCSGG	4 cut(s)	10, 104, 159, 160
BcoDI	GTCTC	5 cut(s)	809, 1589, 1599, 1624, 1735
BfaI	CTAG	4 cut(s)	359, 813, 1026, 1094
BfrI	CTTAAG	2 cut(s)	296, 1543
BfuI	GTATCC	1 cut(s)	1028
BglI	GCCNNNNNGGC	1 cut(s)	83
BglII	AGATCT	1 cut(s)	1531
BisI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1683
BlsI	GCNGC	5 cut(s)	293, 391, 1012, 1179, 1684
Bme1390I	CCNGG	4 cut(s)	10, 104, 159, 160
Bme18I	GGWCC	2 cut(s)	243, 1717
BmeT110I	CYCGRG	3 cut(s)	68, 158, 239
BmgT120I	GGNCC	3 cut(s)	40, 243, 1717
BmiI	GGNNCC	7 cut(s)	32, 50, 188, 194, 244, 510, 1719
BmrFI	CCNGG	4 cut(s)	10, 104, 159, 160
BmrI	ACTGGG	2 cut(s)	869, 1156
BmsI	GCATC	4 cut(s)	392, 942, 1039, 1074
BmuI	ACTGGG	2 cut(s)	869, 1156
BpiI	GAAGAC	2 cut(s)	100, 1569
BplI	GAGNNNNNCTC	2 cut(s)	62, 94
BpmI	CTGGAG	2 cut(s)	185, 1577
BpuEI	CTTGAG	2 cut(s)	215, 1055
BpuMI	CCSGG	4 cut(s)	10, 104, 159, 160
Bsa29I	ATCGAT	1 cut(s)	1047
BsaBI	GATNNNNATC	1 cut(s)	382
BsaHI	GRCGYC	1 cut(s)	1761
BsaI	GGTCTC	2 cut(s)	1589, 1735
BsaJI	CCNNGG	7 cut(s)	81, 157, 158, 168, 983, 1040, 1367
BsaWI	WCCGGW	4 cut(s)	183, 189, 559, 1500
BsaXI	ACNNNNNCTCC	2 cut(s)	1308, 1338
Bse118I	RCCGGY	1 cut(s)	173
Bse21I	CCTNAGG	2 cut(s)	44, 735
Bse8I	GATNNNNATC	1 cut(s)	382
BseCI	ATCGAT	1 cut(s)	1047
BseDI	CCNNGG	7 cut(s)	81, 157, 158, 168, 983, 1040, 1367
BseGI	GGATG	5 cut(s)	5, 313, 383, 1085, 1089
BseJI	GATNNNNATC	1 cut(s)	382
BseMII	CTCAG	2 cut(s)	35, 1373
BseRI	GAGGAG	2 cut(s)	1058, 1368
BseXI	GCAGC	5 cut(s)	278, 376, 1022, 1164, 1669
BseYI	CCCAGC	4 cut(s)	272, 392, 503, 1062
Bsh1285I	CGRYCG	1 cut(s)	147
BshFI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BshVI	ATCGAT	1 cut(s)	1047
BsiEI	CGRYCG	1 cut(s)	147
BsiHKAI	GWGCWC	1 cut(s)	75
BsiHKCI	CYCGRG	3 cut(s)	68, 158, 239
BslFI	GGGAC	1 cut(s)	1703
BsmAI	GTCTC	5 cut(s)	809, 1589, 1599, 1624, 1735
BsmFI	GGGAC	1 cut(s)	1703
BsmI	GAATGC	1 cut(s)	1386
BsnI	GGCC	5 cut(s)	42, 86, 173, 177, 469
Bso31I	GGTCTC	2 cut(s)	1589, 1735
BsoBI	CYCGRG	3 cut(s)	68, 158, 239
Bsp1286I	GDGCHC	1 cut(s)	75
Bsp1407I	TGTACA	1 cut(s)	841
Bsp143I	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1670
Bsp19I	CCATGG	1 cut(s)	1367
BspACI	CCGC	7 cut(s)	34, 122, 147, 387, 440, 955, 1687
BspANI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BspCNI	CTCAG	2 cut(s)	36, 1374
BspDI	ATCGAT	1 cut(s)	1047
BspHI	TCATGA	2 cut(s)	1056, 1444
BspLI	GGNNCC	7 cut(s)	32, 50, 188, 194, 244, 510, 1719
BspPI	GGATC	6 cut(s)	43, 56, 181, 194, 737, 1052
BspTI	CTTAAG	2 cut(s)	296, 1543
BspTNI	GGTCTC	2 cut(s)	1589, 1735
BsrFI	RCCGGY	1 cut(s)	173
BsrGI	TGTACA	1 cut(s)	841
BssAI	RCCGGY	1 cut(s)	173
BssECI	CCNNGG	7 cut(s)	81, 157, 158, 168, 983, 1040, 1367
BssMI	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1670
BssNI	GRCGYC	1 cut(s)	1761
BssSI	CACGAG	2 cut(s)	514, 1125
BssT1I	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
Bst2BI	CACGAG	2 cut(s)	514, 1125
Bst4CI	ACNGT	6 cut(s)	604, 775, 894, 922, 1259, 1320
Bst6I	CTCTTC	3 cut(s)	674, 814, 1411
BstACI	GRCGYC	1 cut(s)	1761
BstAFI	CTTAAG	2 cut(s)	296, 1543
BstAPI	GCANNNNNTGC	2 cut(s)	389, 1464
BstAUI	TGTACA	1 cut(s)	841
BstC8I	GCNNGC	8 cut(s)	75, 175, 501, 765, 974, 1008, 1456, 1687
BstDEI	CTNAG	3 cut(s)	44, 735, 1382
BstDSI	CCRYGG	1 cut(s)	1367
BstENI	CCTNNNNNAGG	2 cut(s)	654, 679
BstF5I	GGATG	5 cut(s)	5, 313, 383, 1085, 1089
BstKTI	GATC	6 cut(s)	51, 189, 745, 1047, 1534, 1673
BstMAI	GTCTC	5 cut(s)	809, 1589, 1599, 1624, 1735
BstMBI	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1670
BstMCI	CGRYCG	1 cut(s)	147
BstMWI	GCNNNNNNNGC	5 cut(s)	83, 273, 389, 1464, 1521
BstNSI	RCATGY	2 cut(s)	831, 1116
BstSCI	CCNGG	4 cut(s)	8, 102, 157, 158
BstV1I	GCAGC	5 cut(s)	278, 376, 1022, 1164, 1669
BstV2I	GAAGAC	2 cut(s)	100, 1569
BstX2I	RGATCY	3 cut(s)	48, 186, 1531
BstXI	CCANNNNNNTGG	1 cut(s)	253
BstYI	RGATCY	3 cut(s)	48, 186, 1531
Bsu15I	ATCGAT	1 cut(s)	1047
Bsu36I	CCTNAGG	2 cut(s)	44, 735
BsuI	GTATCC	1 cut(s)	1028
BsuRI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BsuTUI	ATCGAT	1 cut(s)	1047
BtgI	CCRYGG	1 cut(s)	1367
BtsCI	GGATG	5 cut(s)	5, 313, 383, 1085, 1089
BtsIMutI	CAGTG	6 cut(s)	927, 1144, 1440, 1625, 1632, 1673
Cac8I	GCNNGC	8 cut(s)	75, 175, 501, 765, 974, 1008, 1456, 1687
CaiI	CAGNNNCTG	1 cut(s)	208
CciI	TCATGA	2 cut(s)	1056, 1444
Cfr10I	RCCGGY	1 cut(s)	173
Cfr13I	GGNCC	3 cut(s)	40, 243, 1717
Cfr9I	CCCGGG	1 cut(s)	158
ClaI	ATCGAT	1 cut(s)	1047
CseI	GACGC	1 cut(s)	550
Csp6I	GTAC	3 cut(s)	842, 1331, 1354
CspCI	CAANNNNNGTGG	2 cut(s)	1416, 1451
CviAII	CATG	7 cut(s)	130, 828, 1057, 1113, 1230, 1368, 1445
CviQI	GTAC	3 cut(s)	842, 1331, 1354
DdeI	CTNAG	3 cut(s)	44, 735, 1382
DpnI	GATC	6 cut(s)	50, 188, 744, 1046, 1533, 1672
DpnII	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1670
Eam1104I	CTCTTC	3 cut(s)	674, 814, 1411
EarI	CTCTTC	3 cut(s)	674, 814, 1411
Eco130I	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
Eco147I	AGGCCT	1 cut(s)	86
Eco31I	GGTCTC	2 cut(s)	1589, 1735
Eco32I	GATATC	1 cut(s)	522
Eco47I	GGWCC	2 cut(s)	243, 1717
Eco57I	CTGAAG	1 cut(s)	1503
Eco81I	CCTNAGG	2 cut(s)	44, 735
Eco88I	CYCGRG	3 cut(s)	68, 158, 239
EcoNI	CCTNNNNNAGG	2 cut(s)	654, 679
EcoO109I	RGGNCCY	2 cut(s)	40, 1717
EcoRI	GAATTC	1 cut(s)	1665
EcoRV	GATATC	1 cut(s)	522
EcoT14I	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
EcoT22I	ATGCAT	1 cut(s)	1495
ErhI	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
FaeI	CATG	7 cut(s)	133, 831, 1060, 1116, 1233, 1371, 1448
FalI	AAGNNNNNCTT	4 cut(s)	308, 340, 457, 489
FaqI	GGGAC	1 cut(s)	1703
FatI	CATG	7 cut(s)	129, 827, 1056, 1112, 1229, 1367, 1444
FauI	CCCGC	3 cut(s)	129, 948, 1694
FauNDI	CATATG	1 cut(s)	1489
Fnu4HI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1683
FokI	GGATG	4 cut(s)	320, 370, 1092, 1096
FseI	GGCCGGCC	1 cut(s)	177
Fsp4HI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1683
FspBI	CTAG	4 cut(s)	359, 813, 1026, 1094
GluI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1683
GsaI	CCCAGC	4 cut(s)	276, 396, 507, 1066
GsuI	CTGGAG	2 cut(s)	185, 1577
HaeIII	GGCC	5 cut(s)	42, 86, 173, 177, 469
HgaI	GACGC	1 cut(s)	550
Hin1I	GRCGYC	1 cut(s)	1761
Hin1II	CATG	7 cut(s)	133, 831, 1060, 1116, 1233, 1371, 1448
HincII	GTYRAC	2 cut(s)	1509, 1654
HindII	GTYRAC	2 cut(s)	1509, 1654
HindIII	AAGCTT	2 cut(s)	317, 497
HinfI	GANTC	6 cut(s)	205, 378, 665, 1187, 1448, 1645
HpaI	GTTAAC	1 cut(s)	1654
HphI	GGTGA	7 cut(s)	650, 674, 752, 774, 1142, 1316, 1531
Hpy166II	GTNNAC	3 cut(s)	1144, 1509, 1654
Hpy188I	TCNGA	8 cut(s)	24, 592, 600, 670, 1192, 1383, 1392, 1735
Hpy8I	GTNNAC	3 cut(s)	1144, 1509, 1654
HpyAV	CCTTC	2 cut(s)	459, 842
HpyCH4III	ACNGT	6 cut(s)	604, 775, 894, 922, 1259, 1320
HpyCH4IV	ACGT	1 cut(s)	1761
HpyCH4V	TGCA	8 cut(s)	752, 972, 1087, 1112, 1407, 1454, 1467, 1493
HpyF10VI	GCNNNNNNNGC	5 cut(s)	83, 273, 389, 1464, 1521
HpyF3I	CTNAG	3 cut(s)	44, 735, 1382
HpySE526I	ACGT	1 cut(s)	1761
Hsp92I	GRCGYC	1 cut(s)	1761
Hsp92II	CATG	7 cut(s)	133, 831, 1060, 1116, 1233, 1371, 1448
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
KspAI	GTTAAC	1 cut(s)	1654
Kzo9I	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1670
LmnI	GCTCC	3 cut(s)	204, 1071, 1381
Lsp1109I	GCAGC	5 cut(s)	278, 376, 1022, 1164, 1669
LweI	GCATC	4 cut(s)	392, 942, 1039, 1074
MaeI	CTAG	4 cut(s)	359, 813, 1026, 1094
MaeII	ACGT	1 cut(s)	1761
MaeIII	GTNAC	2 cut(s)	1623, 1630
MalI	GATC	6 cut(s)	50, 188, 744, 1046, 1533, 1672
MboI	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1670
MflI	RGATCY	3 cut(s)	48, 186, 1531
MhlI	GDGCHC	1 cut(s)	75
MluCI	AATT	8 cut(s)	91, 577, 641, 794, 940, 1001, 1410, 1665
MlyI	GAGTC	2 cut(s)	214, 674
MmeI	TCCRAC	1 cut(s)	623
Mph1103I	ATGCAT	1 cut(s)	1495
MroNI	GCCGGC	1 cut(s)	173
MseI	TTAA	9 cut(s)	261, 297, 366, 686, 1121, 1335, 1544, 1653, 1754
MspA1I	CMGCKG	2 cut(s)	389, 1689
MspCI	CTTAAG	2 cut(s)	296, 1543
MspR9I	CCNGG	4 cut(s)	10, 104, 159, 160
Mva1269I	GAATGC	1 cut(s)	1386
MwoI	GCNNNNNNNGC	5 cut(s)	83, 273, 389, 1464, 1521
NaeI	GCCGGC	1 cut(s)	175
NciI	CCSGG	4 cut(s)	10, 104, 159, 160
NcoI	CCATGG	1 cut(s)	1367
NdeI	CATATG	1 cut(s)	1489
NdeII	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1670
NgoMIV	GCCGGC	1 cut(s)	173
NlaIII	CATG	7 cut(s)	133, 831, 1060, 1116, 1233, 1371, 1448
NlaIV	GGNNCC	7 cut(s)	32, 50, 188, 194, 244, 510, 1719
NmuCI	GTSAC	2 cut(s)	1623, 1630
NsiI	ATGCAT	1 cut(s)	1495
NspI	RCATGY	2 cut(s)	831, 1116
PaeR7I	CTCGAG	1 cut(s)	68
PagI	TCATGA	2 cut(s)	1056, 1444
PceI	AGGCCT	1 cut(s)	86
PctI	GAATGC	1 cut(s)	1386
PdiI	GCCGGC	1 cut(s)	175
PfeI	GAWTC	4 cut(s)	378, 1187, 1448, 1645
PflMI	CCANNNNNTGG	1 cut(s)	208
PkrI	GCNGC	5 cut(s)	293, 391, 1012, 1179, 1684
PleI	GAGTC	2 cut(s)	213, 673
PpsI	GAGTC	2 cut(s)	213, 673
PpuMI	RGGWCCY	1 cut(s)	1717
Psp5II	RGGWCCY	1 cut(s)	1717
PspFI	CCCAGC	4 cut(s)	272, 392, 503, 1062
PspN4I	GGNNCC	7 cut(s)	32, 50, 188, 194, 244, 510, 1719
PspPI	GGNCC	3 cut(s)	40, 243, 1717
PspPPI	RGGWCCY	1 cut(s)	1717
PstNI	CAGNNNCTG	1 cut(s)	208
PsuI	RGATCY	3 cut(s)	48, 186, 1531
RigI	GGCCGGCC	1 cut(s)	177
RsaI	GTAC	3 cut(s)	843, 1332, 1355
RsaNI	GTAC	3 cut(s)	842, 1331, 1354
SaqAI	TTAA	9 cut(s)	261, 297, 366, 686, 1121, 1335, 1544, 1653, 1754
SatI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1683
Sau3AI	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1670
Sau96I	GGNCC	3 cut(s)	40, 243, 1717
SchI	GAGTC	2 cut(s)	214, 674
ScrFI	CCNGG	4 cut(s)	10, 104, 159, 160
SduI	GDGCHC	1 cut(s)	75
SfaNI	GCATC	4 cut(s)	392, 942, 1039, 1074
Sfr274I	CTCGAG	1 cut(s)	68
SinI	GGWCC	2 cut(s)	243, 1717
SlaI	CTCGAG	1 cut(s)	68
SmaI	CCCGGG	1 cut(s)	160
SmlI	CTYRAG	5 cut(s)	68, 230, 296, 1070, 1543
SmoI	CTYRAG	5 cut(s)	68, 230, 296, 1070, 1543
Sse9I	AATT	8 cut(s)	91, 577, 641, 794, 940, 1001, 1410, 1665
SseBI	AGGCCT	1 cut(s)	86
SsiI	CCGC	7 cut(s)	34, 122, 147, 387, 440, 955, 1687
SspMI	CTAG	4 cut(s)	359, 813, 1026, 1094
StuI	AGGCCT	1 cut(s)	86
StyD4I	CCNGG	4 cut(s)	8, 102, 157, 158
StyI	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
TaaI	ACNGT	6 cut(s)	604, 775, 894, 922, 1259, 1320
TaiI	ACGT	1 cut(s)	1764
TaqI	TCGA	7 cut(s)	69, 117, 213, 699, 726, 1047, 1669
TasI	AATT	8 cut(s)	91, 577, 641, 794, 940, 1001, 1410, 1665
TatI	WGTACW	3 cut(s)	841, 1330, 1353
TfiI	GAWTC	4 cut(s)	378, 1187, 1448, 1645
Tru1I	TTAA	9 cut(s)	261, 297, 366, 686, 1121, 1335, 1544, 1653, 1754
Tru9I	TTAA	9 cut(s)	261, 297, 366, 686, 1121, 1335, 1544, 1653, 1754
TscAI	CASTG	6 cut(s)	927, 1151, 1440, 1632, 1639, 1680
TseFI	GTSAC	2 cut(s)	1623, 1630
TseI	GCWGC	5 cut(s)	291, 389, 1010, 1177, 1682
Tsp45I	GTSAC	2 cut(s)	1623, 1630
TspDTI	ATGAA	2 cut(s)	146, 636
TspMI	CCCGGG	1 cut(s)	158
TspRI	CASTG	6 cut(s)	927, 1151, 1440, 1632, 1639, 1680
Van91I	CCANNNNNTGG	1 cut(s)	208
Vha464I	CTTAAG	2 cut(s)	296, 1543
VpaK11BI	GGWCC	2 cut(s)	243, 1717
XagI	CCTNNNNNAGG	2 cut(s)	654, 679
XapI	RAATTY	3 cut(s)	641, 794, 1665
XbaI	TCTAGA	2 cut(s)	358, 812
XceI	RCATGY	2 cut(s)	831, 1116
XhoI	CTCGAG	1 cut(s)	68
XmaI	CCCGGG	1 cut(s)	158
XspI	CTAG	4 cut(s)	359, 813, 1026, 1094
ZraI	GACGTC	1 cut(s)	1762
Zsp2I	ATGCAT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.