Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0010342

Physical Location & Seq

Genomic Coordinates Reverse (-)

53844754 .. 53849038

Gene Structure 4285 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019580

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGTCATCCGGGTCGGGTTCTCTGATGTGGTTCCGCAAGGGCCTGAGGATCCACGACAACCCTGCTCTCGAGCACGCCTCCAAGGCCTCCAATTTCCTCTACCCGGTCTTCGTCATCGACCCGCACTACATGAAGCCCGACCCGACCGCACCCTCCCCCGGGTCGTCCAAGGCCGGCCTGAACCGGATCCGGTTTCTGCTCCAGAGTCTGGTCGATTTGGATTTGAGCCTCAAGAAGCTCGGGTCCAGATTGTTGGTGCTTAAAGGCGACCCCAGCGAGGTCATCGTTCGTTGCCTTAAGGAGTGGGATGTGAAAAAGCTTTGCTTTGAGTATGATACTGAAACATATTACCAAGCTCTAGATGTTAAAGTCAAGGGTTTCGCATCCGCGGCTGGGATTGAGGTTTTCAGTCCTGTAAGTCATACGCTGTTCAATCCTGCGGAGATTATACAGAAGAATGGGGGAAGGCCACCTTTGAGTTATCAATCATTTATAAAGCTTGCTGGGGAACCCTCGTGTATATCCACGCCTCTTTCTATGACGCTTTCTTCACTTCCTCCGGTTGGGAATGTTGCGAATTGTGAGGTTTCAGAAGTTCCGACTGTTGAAGAACTAGGTTATGAAGAGGCTCAACAGGATGAATTTTCTCCTTTTAGAGGTGGTGAGTCAGAAGCCTTGAAGAGGTTAAGACAATCAATCGAAAAAAAGGAGTGGGTGGCAAACTTTGAGAAACCCAAGGGTGATCCATCTGCATTTCTGAAGCCAGCAACAACTGTTTTATCACCTTATCTGAAATTTGGTTGTCTCTCTTCTAGATACTTTTACACATGCCTTCAAGATGTACAGAAAAATGTCAAAAGGCATACATTACCCCCAGTATCTCTTGCTGGACAGTTATTATGGCGAGAGTTTTTCTACACAGTGGCATTTGGCACTCCTAATTTTGACCAGATGCGGGGAAACAAAATATGCAAGCAGATACCTTGGAATGATGATGATAAATTGCTGGCAGCATGGAGGGAGGCTAGAACAGGATACCCTTGGATCGATGCTATCATGACCCAGCTCCACAAGTGGGGATGGATGCACCATCTAGCACGACATTCTGTTGCATGTTTTTTAACTCGTGGTGATTTGTTTGTTCACTGGGAAAAAGGGCGTGATGTTTTTGAGAGGCTGCTGATTGATTCAGATTGGGCAATCAATAACGGAAACTGGCTATGGCTATCATGCTCATCATTTTTCTACCAGTATAACCGTATCTATTCCCCAATCTCGTTTGGAAAGAAGTATGACCCAAATGGTGATTACATTAGACAGTTTCTCCCTGTACTTAAAGATATGCCAAAGGAGTACATTTATGAGCCATGGACAGCTCCTCTGAGCATTCAGAACAAAGCAAAGTGCATAATTGGAAGAGATTATCCAAAGCCAGTGGTTTATCATGATTCTGCAAGCAAAGATTGCAAGAAGAAAATGGCTGAAGCATATGCATTAAACCAGAAGTTGACAGGCTTGGTGAGTGAAGCAGATCTAATAAACTTACGAAGAAAACTGGAGGAAGACCAAAAGCCAGAGGTAAAGAACAAACGGCAAAGAAAGCTGACGGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003913 GO:0003914 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0016829 GO:0016830 GO:0050896 GO:0140097

KEGG Pathways

Metabolic & Signaling

ko04710 map04710

Pfam Domains

Protein Families

DNA_photolyase FAD_binding_7

Protein Analysis

538

Amino Acids

61.32

Weight (kDa)

8.97

Isoelectric Point (pI)

47.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_photolyase	PF00875	7 - 167	1.4e-42	DNA photolyase
FAD_binding_7	PF03441	297 - 494	6.1e-75	FAD binding domain of DNA photolyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15620 AT3G15620
fragaria_vesca	FvH4_6g30470 FvH4_6g30470 FvH4_6g30470 FvH4_6g30470 FvH4_6g30470
malus_domestica	MD17G1203600.v1.1
prunus_persica	Prupe.3G078500_v2.0.a1
pyrus_communis	pycom17g20720
rosa_chinensis	RchiOBHm_Chr2g0136821
rosa_laevigata	RLG00000019580
rosa_multiflora	Rmu_sc0001299.1_g000012 Rmu_sc0005272.1_g000003
rosa_roxburghii	Rroxscaffold_2G00107960
rosa_rugosa	Rorug02G0334100 Rorug02G0334200 Rorug02G0334300
rosa_samantha	Rh2AG384400 Rh2DG407900
rosa_wichuraiana	Rw2G031440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	494
AccB7I	CCANNNNNTGG	1 cut(s)	208
AccII	CGCG	1 cut(s)	389
AciI	CCGC	7 cut(s)	34, 122, 147, 387, 389, 440, 955
AclWI	GGATC	6 cut(s)	43, 56, 181, 194, 737, 1052
AcsI	RAATTY	2 cut(s)	641, 794
AcuI	CTGAAG	2 cut(s)	779, 1503
AfaI	GTAC	3 cut(s)	843, 1332, 1355
AflII	CTTAAG	1 cut(s)	296
AgsI	TTSAA	4 cut(s)	433, 608, 679, 836
AluBI	AGCT	7 cut(s)	238, 319, 356, 499, 1066, 1376, 1603
AluI	AGCT	7 cut(s)	238, 319, 356, 499, 1066, 1376, 1603
Alw21I	GWGCWC	1 cut(s)	75
Alw26I	GTCTC	1 cut(s)	809
AlwI	GGATC	6 cut(s)	43, 56, 181, 194, 737, 1052
AlwNI	CAGNNNCTG	1 cut(s)	208
Ama87I	CYCGRG	3 cut(s)	68, 158, 239
AoxI	GGCC	5 cut(s)	40, 84, 171, 175, 467
ApeKI	GCWGC	2 cut(s)	1010, 1177
ApoI	RAATTY	2 cut(s)	641, 794
AspS9I	GGNCC	2 cut(s)	40, 243
AsuC2I	CCSGG	4 cut(s)	10, 104, 159, 160
AsuHPI	GGTGA	6 cut(s)	674, 752, 774, 1142, 1316, 1531
AvaI	CYCGRG	3 cut(s)	68, 158, 239
AvaII	GGWCC	1 cut(s)	243
AxyI	CCTNAGG	1 cut(s)	44
BamHI	GGATCC	2 cut(s)	48, 186
BauI	CACGAG	2 cut(s)	514, 1125
BbsI	GAAGAC	2 cut(s)	100, 1569
Bbv12I	GWGCWC	1 cut(s)	75
BbvI	GCAGC	2 cut(s)	1022, 1164
BccI	CCATC	3 cut(s)	754, 1074, 1098
BceAI	ACGGC	1 cut(s)	1607
BcgI	CGANNNNNNTGC	2 cut(s)	44, 78
BciVI	GTATCC	1 cut(s)	1028
BcnI	CCSGG	4 cut(s)	10, 104, 159, 160
BcoDI	GTCTC	1 cut(s)	809
BfaI	CTAG	5 cut(s)	359, 614, 813, 1026, 1094
BfrI	CTTAAG	1 cut(s)	296
BfuI	GTATCC	1 cut(s)	1028
BglI	GCCNNNNNGGC	1 cut(s)	83
BglII	AGATCT	1 cut(s)	1531
BisI	GCNGC	3 cut(s)	390, 1011, 1178
BlsI	GCNGC	3 cut(s)	391, 1012, 1179
Bme1390I	CCNGG	4 cut(s)	10, 104, 159, 160
Bme18I	GGWCC	1 cut(s)	243
BmeT110I	CYCGRG	3 cut(s)	68, 158, 239
BmgT120I	GGNCC	2 cut(s)	40, 243
BmiI	GGNNCC	5 cut(s)	32, 50, 188, 244, 510
BmrFI	CCNGG	4 cut(s)	10, 104, 159, 160
BmrI	ACTGGG	2 cut(s)	869, 1156
BmsI	GCATC	4 cut(s)	392, 942, 1039, 1074
BmuI	ACTGGG	2 cut(s)	869, 1156
BpiI	GAAGAC	2 cut(s)	100, 1569
BplI	GAGNNNNNCTC	2 cut(s)	62, 94
BpmI	CTGGAG	2 cut(s)	185, 1577
BpuEI	CTTGAG	1 cut(s)	215
BpuMI	CCSGG	4 cut(s)	10, 104, 159, 160
Bsa29I	ATCGAT	1 cut(s)	1047
BsaJI	CCNNGG	9 cut(s)	81, 157, 158, 168, 387, 735, 983, 1040, 1367
BsaWI	WCCGGW	3 cut(s)	183, 189, 559
BsaXI	ACNNNNNCTCC	2 cut(s)	1308, 1338
Bse118I	RCCGGY	1 cut(s)	173
Bse1I	ACTGG	6 cut(s)	875, 1151, 1220, 1249, 1433, 1560
Bse21I	CCTNAGG	1 cut(s)	44
BseCI	ATCGAT	1 cut(s)	1047
BseDI	CCNNGG	9 cut(s)	81, 157, 158, 168, 387, 735, 983, 1040, 1367
BseGI	GGATG	6 cut(s)	5, 313, 383, 643, 1085, 1089
BseMII	CTCAG	2 cut(s)	35, 1373
BseNI	ACTGG	6 cut(s)	875, 1151, 1220, 1249, 1433, 1560
BseRI	GAGGAG	1 cut(s)	1368
BseXI	GCAGC	2 cut(s)	1022, 1164
BseYI	CCCAGC	4 cut(s)	272, 392, 503, 1062
Bsh1236I	CGCG	1 cut(s)	389
Bsh1285I	CGRYCG	1 cut(s)	147
BshFI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BshVI	ATCGAT	1 cut(s)	1047
BsiEI	CGRYCG	1 cut(s)	147
BsiHKAI	GWGCWC	1 cut(s)	75
BsiHKCI	CYCGRG	3 cut(s)	68, 158, 239
BsiSI	CCGG	7 cut(s)	9, 104, 159, 174, 184, 190, 560
BsmAI	GTCTC	1 cut(s)	809
BsmI	GAATGC	1 cut(s)	1386
BsnI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BsoBI	CYCGRG	3 cut(s)	68, 158, 239
Bsp1286I	GDGCHC	1 cut(s)	75
Bsp1407I	TGTACA	1 cut(s)	841
Bsp143I	GATC	5 cut(s)	48, 186, 742, 1044, 1531
Bsp19I	CCATGG	1 cut(s)	1367
BspACI	CCGC	7 cut(s)	34, 122, 147, 387, 389, 440, 955
BspANI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BspCNI	CTCAG	2 cut(s)	36, 1374
BspDI	ATCGAT	1 cut(s)	1047
BspFNI	CGCG	1 cut(s)	389
BspHI	TCATGA	2 cut(s)	1056, 1444
BspLI	GGNNCC	5 cut(s)	32, 50, 188, 244, 510
BspPI	GGATC	6 cut(s)	43, 56, 181, 194, 737, 1052
BspTI	CTTAAG	1 cut(s)	296
BsrFI	RCCGGY	1 cut(s)	173
BsrGI	TGTACA	1 cut(s)	841
BsrI	ACTGG	6 cut(s)	875, 1151, 1220, 1249, 1433, 1560
BssAI	RCCGGY	1 cut(s)	173
BssECI	CCNNGG	9 cut(s)	81, 157, 158, 168, 387, 735, 983, 1040, 1367
BssMI	GATC	5 cut(s)	48, 186, 742, 1044, 1531
BssSI	CACGAG	2 cut(s)	514, 1125
BssT1I	CCWWGG	6 cut(s)	81, 168, 735, 983, 1040, 1367
Bst2BI	CACGAG	2 cut(s)	514, 1125
Bst4CI	ACNGT	6 cut(s)	604, 775, 894, 922, 1259, 1320
Bst6I	CTCTTC	4 cut(s)	618, 674, 814, 1411
BstAFI	CTTAAG	1 cut(s)	296
BstAPI	GCANNNNNTGC	1 cut(s)	1464
BstAUI	TGTACA	1 cut(s)	841
BstC8I	GCNNGC	7 cut(s)	75, 175, 501, 765, 974, 1008, 1456
BstDEI	CTNAG	2 cut(s)	44, 1382
BstDSI	CCRYGG	2 cut(s)	387, 1367
BstENI	CCTNNNNNAGG	2 cut(s)	654, 679
BstF5I	GGATG	6 cut(s)	5, 313, 383, 643, 1085, 1089
BstFNI	CGCG	1 cut(s)	389
BstKTI	GATC	5 cut(s)	51, 189, 745, 1047, 1534
BstMAI	GTCTC	1 cut(s)	809
BstMBI	GATC	5 cut(s)	48, 186, 742, 1044, 1531
BstMCI	CGRYCG	1 cut(s)	147
BstMWI	GCNNNNNNNGC	5 cut(s)	83, 273, 389, 1464, 1600
BstNSI	RCATGY	2 cut(s)	831, 1116
BstSCI	CCNGG	4 cut(s)	8, 102, 157, 158
BstUI	CGCG	1 cut(s)	389
BstV1I	GCAGC	2 cut(s)	1022, 1164
BstV2I	GAAGAC	2 cut(s)	100, 1569
BstX2I	RGATCY	3 cut(s)	48, 186, 1531
BstXI	CCANNNNNNTGG	1 cut(s)	253
BstYI	RGATCY	3 cut(s)	48, 186, 1531
Bsu15I	ATCGAT	1 cut(s)	1047
Bsu36I	CCTNAGG	1 cut(s)	44
BsuI	GTATCC	1 cut(s)	1028
BsuRI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BsuTUI	ATCGAT	1 cut(s)	1047
BtgI	CCRYGG	2 cut(s)	387, 1367
BtsCI	GGATG	6 cut(s)	5, 313, 383, 643, 1085, 1089
BtsIMutI	CAGTG	3 cut(s)	927, 1144, 1440
Cac8I	GCNNGC	7 cut(s)	75, 175, 501, 765, 974, 1008, 1456
CaiI	CAGNNNCTG	1 cut(s)	208
CciI	TCATGA	2 cut(s)	1056, 1444
Cfr10I	RCCGGY	1 cut(s)	173
Cfr13I	GGNCC	2 cut(s)	40, 243
Cfr42I	CCGCGG	1 cut(s)	390
Cfr9I	CCCGGG	1 cut(s)	158
ClaI	ATCGAT	1 cut(s)	1047
CseI	GACGC	1 cut(s)	550
Csp6I	GTAC	3 cut(s)	842, 1331, 1354
CspCI	CAANNNNNGTGG	2 cut(s)	1416, 1451
CviAII	CATG	8 cut(s)	130, 828, 1014, 1057, 1113, 1230, 1368, 1445
CviQI	GTAC	3 cut(s)	842, 1331, 1354
DdeI	CTNAG	2 cut(s)	44, 1382
DpnI	GATC	5 cut(s)	50, 188, 744, 1046, 1533
DpnII	GATC	5 cut(s)	48, 186, 742, 1044, 1531
Eam1104I	CTCTTC	4 cut(s)	618, 674, 814, 1411
EarI	CTCTTC	4 cut(s)	618, 674, 814, 1411
Eco130I	CCWWGG	6 cut(s)	81, 168, 735, 983, 1040, 1367
Eco147I	AGGCCT	1 cut(s)	86
Eco47I	GGWCC	1 cut(s)	243
Eco57I	CTGAAG	2 cut(s)	779, 1503
Eco81I	CCTNAGG	1 cut(s)	44
Eco88I	CYCGRG	3 cut(s)	68, 158, 239
EcoNI	CCTNNNNNAGG	2 cut(s)	654, 679
EcoO109I	RGGNCCY	1 cut(s)	40
EcoT14I	CCWWGG	6 cut(s)	81, 168, 735, 983, 1040, 1367
EcoT22I	ATGCAT	1 cut(s)	1495
ErhI	CCWWGG	6 cut(s)	81, 168, 735, 983, 1040, 1367
FaeI	CATG	8 cut(s)	133, 831, 1017, 1060, 1116, 1233, 1371, 1448
FalI	AAGNNNNNCTT	4 cut(s)	308, 340, 457, 489
FatI	CATG	8 cut(s)	129, 827, 1013, 1056, 1112, 1229, 1367, 1444
FauI	CCCGC	2 cut(s)	129, 948
FauNDI	CATATG	1 cut(s)	1489
Fnu4HI	GCNGC	3 cut(s)	390, 1011, 1178
FokI	GGATG	5 cut(s)	320, 370, 650, 1092, 1096
FseI	GGCCGGCC	1 cut(s)	177
Fsp4HI	GCNGC	3 cut(s)	390, 1011, 1178
FspBI	CTAG	5 cut(s)	359, 614, 813, 1026, 1094
GluI	GCNGC	3 cut(s)	390, 1011, 1178
GsaI	CCCAGC	4 cut(s)	276, 396, 507, 1066
GsuI	CTGGAG	2 cut(s)	185, 1577
HaeIII	GGCC	5 cut(s)	42, 86, 173, 177, 469
HapII	CCGG	7 cut(s)	9, 104, 159, 174, 184, 190, 560
HgaI	GACGC	1 cut(s)	550
Hin1II	CATG	8 cut(s)	133, 831, 1017, 1060, 1116, 1233, 1371, 1448
HincII	GTYRAC	1 cut(s)	1509
HindII	GTYRAC	1 cut(s)	1509
HindIII	AAGCTT	2 cut(s)	317, 497
HinfI	GANTC	4 cut(s)	205, 665, 1187, 1448
HpaII	CCGG	7 cut(s)	9, 104, 159, 174, 184, 190, 560
HphI	GGTGA	6 cut(s)	674, 752, 774, 1142, 1316, 1531
Hpy166II	GTNNAC	2 cut(s)	1144, 1509
Hpy188I	TCNGA	9 cut(s)	24, 592, 600, 670, 759, 792, 1192, 1383, 1392
Hpy188III	TCNNGA	9 cut(s)	68, 202, 232, 246, 359, 813, 836, 1057, 1445
Hpy8I	GTNNAC	2 cut(s)	1144, 1509
HpyAV	CCTTC	2 cut(s)	459, 842
HpyCH4III	ACNGT	6 cut(s)	604, 775, 894, 922, 1259, 1320
HpyCH4V	TGCA	8 cut(s)	752, 972, 1087, 1112, 1407, 1454, 1467, 1493
HpyF10VI	GCNNNNNNNGC	5 cut(s)	83, 273, 389, 1464, 1600
HpyF3I	CTNAG	2 cut(s)	44, 1382
Hsp92II	CATG	8 cut(s)	133, 831, 1017, 1060, 1116, 1233, 1371, 1448
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
KspI	CCGCGG	1 cut(s)	390
Kzo9I	GATC	5 cut(s)	48, 186, 742, 1044, 1531
LmnI	GCTCC	3 cut(s)	204, 1071, 1381
Lsp1109I	GCAGC	2 cut(s)	1022, 1164
LweI	GCATC	4 cut(s)	392, 942, 1039, 1074
MaeI	CTAG	5 cut(s)	359, 614, 813, 1026, 1094
MalI	GATC	5 cut(s)	50, 188, 744, 1046, 1533
MboI	GATC	5 cut(s)	48, 186, 742, 1044, 1531
MflI	RGATCY	3 cut(s)	48, 186, 1531
MhlI	GDGCHC	1 cut(s)	75
MluCI	AATT	7 cut(s)	91, 577, 641, 794, 940, 1001, 1410
MlyI	GAGTC	2 cut(s)	214, 674
MmeI	TCCRAC	1 cut(s)	623
Mph1103I	ATGCAT	1 cut(s)	1495
MroNI	GCCGGC	1 cut(s)	173
MseI	TTAA	7 cut(s)	261, 297, 366, 686, 1121, 1335, 1496
MspA1I	CMGCKG	1 cut(s)	389
MspCI	CTTAAG	1 cut(s)	296
MspI	CCGG	7 cut(s)	9, 104, 159, 174, 184, 190, 560
MspR9I	CCNGG	4 cut(s)	10, 104, 159, 160
Mva1269I	GAATGC	1 cut(s)	1386
MvnI	CGCG	1 cut(s)	389
MwoI	GCNNNNNNNGC	5 cut(s)	83, 273, 389, 1464, 1600
NaeI	GCCGGC	1 cut(s)	175
NciI	CCSGG	4 cut(s)	10, 104, 159, 160
NcoI	CCATGG	1 cut(s)	1367
NdeI	CATATG	1 cut(s)	1489
NdeII	GATC	5 cut(s)	48, 186, 742, 1044, 1531
NgoMIV	GCCGGC	1 cut(s)	173
NlaIII	CATG	8 cut(s)	133, 831, 1017, 1060, 1116, 1233, 1371, 1448
NlaIV	GGNNCC	5 cut(s)	32, 50, 188, 244, 510
NsiI	ATGCAT	1 cut(s)	1495
NspI	RCATGY	2 cut(s)	831, 1116
PaeR7I	CTCGAG	1 cut(s)	68
PagI	TCATGA	2 cut(s)	1056, 1444
PceI	AGGCCT	1 cut(s)	86
PctI	GAATGC	1 cut(s)	1386
PdiI	GCCGGC	1 cut(s)	175
PfeI	GAWTC	2 cut(s)	1187, 1448
PflMI	CCANNNNNTGG	1 cut(s)	208
PkrI	GCNGC	3 cut(s)	391, 1012, 1179
PleI	GAGTC	2 cut(s)	213, 673
PpsI	GAGTC	2 cut(s)	213, 673
PsiI	TTATAA	1 cut(s)	494
PspFI	CCCAGC	4 cut(s)	272, 392, 503, 1062
PspN4I	GGNNCC	5 cut(s)	32, 50, 188, 244, 510
PspPI	GGNCC	2 cut(s)	40, 243
PstNI	CAGNNNCTG	1 cut(s)	208
PsuI	RGATCY	3 cut(s)	48, 186, 1531
RigI	GGCCGGCC	1 cut(s)	177
RsaI	GTAC	3 cut(s)	843, 1332, 1355
RsaNI	GTAC	3 cut(s)	842, 1331, 1354
SacII	CCGCGG	1 cut(s)	390
SaqAI	TTAA	7 cut(s)	261, 297, 366, 686, 1121, 1335, 1496
SatI	GCNGC	3 cut(s)	390, 1011, 1178
Sau3AI	GATC	5 cut(s)	48, 186, 742, 1044, 1531
Sau96I	GGNCC	2 cut(s)	40, 243
SchI	GAGTC	2 cut(s)	214, 674
ScrFI	CCNGG	4 cut(s)	10, 104, 159, 160
SduI	GDGCHC	1 cut(s)	75
SfaNI	GCATC	4 cut(s)	392, 942, 1039, 1074
Sfr274I	CTCGAG	1 cut(s)	68
Sfr303I	CCGCGG	1 cut(s)	390
SgrBI	CCGCGG	1 cut(s)	390
SinI	GGWCC	1 cut(s)	243
SlaI	CTCGAG	1 cut(s)	68
SmaI	CCCGGG	1 cut(s)	160
SmlI	CTYRAG	3 cut(s)	68, 230, 296
SmoI	CTYRAG	3 cut(s)	68, 230, 296
Sse9I	AATT	7 cut(s)	91, 577, 641, 794, 940, 1001, 1410
SseBI	AGGCCT	1 cut(s)	86
SsiI	CCGC	7 cut(s)	34, 122, 147, 387, 389, 440, 955
SspMI	CTAG	5 cut(s)	359, 614, 813, 1026, 1094
StuI	AGGCCT	1 cut(s)	86
StyD4I	CCNGG	4 cut(s)	8, 102, 157, 158
StyI	CCWWGG	6 cut(s)	81, 168, 735, 983, 1040, 1367
TaaI	ACNGT	6 cut(s)	604, 775, 894, 922, 1259, 1320
TaqI	TCGA	5 cut(s)	69, 117, 213, 699, 1047
TasI	AATT	7 cut(s)	91, 577, 641, 794, 940, 1001, 1410
TatI	WGTACW	3 cut(s)	841, 1330, 1353
TauI	GCSGC	1 cut(s)	392
TfiI	GAWTC	2 cut(s)	1187, 1448
Tru1I	TTAA	7 cut(s)	261, 297, 366, 686, 1121, 1335, 1496
Tru9I	TTAA	7 cut(s)	261, 297, 366, 686, 1121, 1335, 1496
TscAI	CASTG	3 cut(s)	927, 1151, 1440
TseI	GCWGC	2 cut(s)	1010, 1177
TspDTI	ATGAA	3 cut(s)	146, 636, 654
TspGWI	ACGGA	1 cut(s)	1224
TspMI	CCCGGG	1 cut(s)	158
TspRI	CASTG	3 cut(s)	927, 1151, 1440
Van91I	CCANNNNNTGG	1 cut(s)	208
Vha464I	CTTAAG	1 cut(s)	296
VpaK11BI	GGWCC	1 cut(s)	243
XagI	CCTNNNNNAGG	2 cut(s)	654, 679
XapI	RAATTY	2 cut(s)	641, 794
XbaI	TCTAGA	2 cut(s)	358, 812
XceI	RCATGY	2 cut(s)	831, 1116
XhoI	CTCGAG	1 cut(s)	68
XmaI	CCCGGG	1 cut(s)	158
XspI	CTAG	5 cut(s)	359, 614, 813, 1026, 1094
Zsp2I	ATGCAT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.