Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001299.1

Orthogroup ID

OG0010342

Physical Location & Seq

Genomic Coordinates Forward (+)

59134 .. 64481

Gene Structure 5348 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001299.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

atgtcatccgggtcgggttctctgatgtggttccgcaagggcctgaggatccacgacaaccctgctctcgagcacgcctccaaggcctccaatttcctctacccggtcttcgtcatcgacccgcactacatgaagcccgacccgaccgcaccctcccccgggtcgtccaaggccggcctgaaccggatccggttcctgctccagagtctggtcgatttggatttgagcctcaagaagctcgggtccagattgttggtgcttaaaggcgaccccagcgaggtcatcgttcgctgccttaaggagtgggatgtgaaaaagctttgctttgagtatgatactgaaccatattaccaagctctagatgttaaagtcaagggattcgcatccgctgctgggattgaggttttcagtcctgtaagtcatacgctgttcaatcctgcggagattatacagaagaatgggggaaggccacctttgagttatcaatcatttgtaaagcttgctggggaaccctcgtggatatccacgcctctttctatgacgctttcttcacttcctccggttgggaatgttgcgaattgtgaggtttcagaagttccgactgttgaagaacttggttatgaagtggctcaacagggtgaattttctccttttagaggtggtgagtcagaagccttgaagaggttaagacaatcaatcgaaaaaaaggagtgggtggcaaacttcgagaaacctaagggtgatccatctgcatttctaaagccagcaacaactgttttatcaccttatttgaaatttggttgtctctcttctagatacttttacacatgccttcaagatgtacagaaaaatgtcaaaaggcatacattacccccagtatctcttgctggacagttattatggcgagagtttttctacacagtggcatttggcactcctaattttgaccagatgcgggggaacaaaatatgcaagcagataccttggaatgatgatgataaattgctggcagcttggagggaggctagaacaggatacccttggatcgatgctatcatgacccagctcctcaagtggggatggatgcaccatctagcacgacattctgttgcatgttttttaactcgtggtgatttgtttgttcactgggaaaaagggcgtgatgtttttgagaggctgctgattgattcagattgggcaatcaataatggaaactggctatggctatcatgctcatcatttttctaccagtataaccgtatctactccccaatctcgtttggaaagaagtatgacccaaatggtgattacattagacagtttctccctgtacttaaagatatgccaaaggagtacatttatgagccatggacagctcctctgagcattcagaacaaagcaaagtgcataattggaagagattatccaaagccagtggtttatcatgattctgcaagcaaagaatgcaagaagaaaatggctgaagcatatgcattgaaccggaagttgacaagctcggtgagcgaagaagatctaataaacttaagaagaaaactggaggaagaccaaaagccagaggagacttcgctggagtctcgtcactggtcactggtcactggtcgccggattccagtcaacttcgccggaattcgatcactggtcgccgccctctggacttttttgaaaacctcgccggaggtccccaaagaggtctccggaaatgtttattgccccttgatagacgtctattgcccaccaatagaggggcaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003913 GO:0003914 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0016829 GO:0016830 GO:0050896 GO:0140097

KEGG Pathways

Metabolic & Signaling

ko04710 map04710

Pfam Domains

Protein Families

DNA_photolyase FAD_binding_7

Protein Analysis

590

Amino Acids

67.18

Weight (kDa)

8.76

Isoelectric Point (pI)

49.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15620 AT3G15620
fragaria_vesca	FvH4_6g30470 FvH4_6g30470 FvH4_6g30470 FvH4_6g30470 FvH4_6g30470
malus_domestica	MD17G1203600.v1.1
prunus_persica	Prupe.3G078500_v2.0.a1
pyrus_communis	pycom17g20720
rosa_chinensis	RchiOBHm_Chr2g0136821
rosa_laevigata	RLG00000019580
rosa_multiflora	Rmu_sc0001299.1_g000012 Rmu_sc0005272.1_g000003
rosa_roxburghii	Rroxscaffold_2G00107960
rosa_rugosa	Rorug02G0334100 Rorug02G0334200 Rorug02G0334300
rosa_samantha	Rh2AG384400 Rh2DG407900
rosa_wichuraiana	Rw2G031440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1746
AccB7I	CCANNNNNTGG	1 cut(s)	208
AccIII	TCCGGA	1 cut(s)	1715
AciI	CCGC	7 cut(s)	34, 122, 147, 387, 440, 955, 1665
AclWI	GGATC	6 cut(s)	43, 56, 181, 194, 737, 1052
AcsI	RAATTY	3 cut(s)	641, 794, 1647
AcuI	CTGAAG	1 cut(s)	1503
AcyI	GRCGYC	1 cut(s)	1743
AfaI	GTAC	3 cut(s)	843, 1332, 1355
AflII	CTTAAG	2 cut(s)	296, 1543
AgsI	TTSAA	7 cut(s)	433, 608, 679, 793, 836, 1498, 1684
AluBI	AGCT	8 cut(s)	238, 319, 356, 499, 1013, 1066, 1376, 1515
AluI	AGCT	8 cut(s)	238, 319, 356, 499, 1013, 1066, 1376, 1515
Alw21I	GWGCWC	1 cut(s)	75
Alw26I	GTCTC	4 cut(s)	809, 1574, 1599, 1717
AlwI	GGATC	6 cut(s)	43, 56, 181, 194, 737, 1052
AlwNI	CAGNNNCTG	1 cut(s)	208
Ama87I	CYCGRG	3 cut(s)	68, 158, 239
Aor13HI	TCCGGA	1 cut(s)	1715
AoxI	GGCC	5 cut(s)	40, 84, 171, 175, 467
ApeKI	GCWGC	4 cut(s)	291, 389, 1010, 1177
ApoI	RAATTY	3 cut(s)	641, 794, 1647
AspS9I	GGNCC	3 cut(s)	40, 243, 1699
AsuC2I	CCSGG	4 cut(s)	10, 104, 159, 160
AsuHPI	GGTGA	7 cut(s)	650, 674, 752, 774, 1142, 1316, 1531
AvaI	CYCGRG	3 cut(s)	68, 158, 239
AvaII	GGWCC	2 cut(s)	243, 1699
AxyI	CCTNAGG	2 cut(s)	44, 735
BamHI	GGATCC	2 cut(s)	48, 186
BauI	CACGAG	2 cut(s)	514, 1125
BbsI	GAAGAC	2 cut(s)	100, 1569
Bbv12I	GWGCWC	1 cut(s)	75
BbvI	GCAGC	4 cut(s)	278, 376, 1022, 1164
BccI	CCATC	3 cut(s)	754, 1074, 1098
BcgI	CGANNNNNNTGC	2 cut(s)	44, 78
BciVI	GTATCC	1 cut(s)	1028
BcnI	CCSGG	4 cut(s)	10, 104, 159, 160
BcoDI	GTCTC	4 cut(s)	809, 1574, 1599, 1717
BfaI	CTAG	4 cut(s)	359, 813, 1026, 1094
BfrI	CTTAAG	2 cut(s)	296, 1543
BfuI	GTATCC	1 cut(s)	1028
BglI	GCCNNNNNGGC	1 cut(s)	83
BglII	AGATCT	1 cut(s)	1531
BisI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1665
BlsI	GCNGC	5 cut(s)	293, 391, 1012, 1179, 1666
Bme1390I	CCNGG	4 cut(s)	10, 104, 159, 160
Bme18I	GGWCC	2 cut(s)	243, 1699
BmeT110I	CYCGRG	3 cut(s)	68, 158, 239
BmgT120I	GGNCC	3 cut(s)	40, 243, 1699
BmiI	GGNNCC	7 cut(s)	32, 50, 188, 194, 244, 510, 1701
BmrFI	CCNGG	4 cut(s)	10, 104, 159, 160
BmrI	ACTGGG	2 cut(s)	869, 1156
BmsI	GCATC	4 cut(s)	392, 942, 1039, 1074
BmuI	ACTGGG	2 cut(s)	869, 1156
BpiI	GAAGAC	2 cut(s)	100, 1569
BplI	GAGNNNNNCTC	2 cut(s)	62, 94
BpmI	CTGGAG	3 cut(s)	185, 1577, 1610
BpuEI	CTTGAG	2 cut(s)	215, 1055
BpuMI	CCSGG	4 cut(s)	10, 104, 159, 160
Bsa29I	ATCGAT	1 cut(s)	1047
BsaBI	GATNNNNATC	1 cut(s)	382
BsaHI	GRCGYC	1 cut(s)	1743
BsaI	GGTCTC	1 cut(s)	1717
BsaJI	CCNNGG	7 cut(s)	81, 157, 158, 168, 983, 1040, 1367
BsaWI	WCCGGW	5 cut(s)	183, 189, 559, 1500, 1715
BsaXI	ACNNNNNCTCC	2 cut(s)	1308, 1338
Bse118I	RCCGGY	1 cut(s)	173
Bse21I	CCTNAGG	2 cut(s)	44, 735
Bse8I	GATNNNNATC	1 cut(s)	382
BseAI	TCCGGA	1 cut(s)	1715
BseCI	ATCGAT	1 cut(s)	1047
BseDI	CCNNGG	7 cut(s)	81, 157, 158, 168, 983, 1040, 1367
BseGI	GGATG	5 cut(s)	5, 313, 383, 1085, 1089
BseJI	GATNNNNATC	1 cut(s)	382
BseMII	CTCAG	2 cut(s)	35, 1373
BseRI	GAGGAG	3 cut(s)	1058, 1368, 1592
BseXI	GCAGC	4 cut(s)	278, 376, 1022, 1164
BseYI	CCCAGC	4 cut(s)	272, 392, 503, 1062
Bsh1285I	CGRYCG	1 cut(s)	147
BshFI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BshVI	ATCGAT	1 cut(s)	1047
BsiEI	CGRYCG	1 cut(s)	147
BsiHKAI	GWGCWC	1 cut(s)	75
BsiHKCI	CYCGRG	3 cut(s)	68, 158, 239
BslFI	GGGAC	1 cut(s)	1685
BsmAI	GTCTC	4 cut(s)	809, 1574, 1599, 1717
BsmFI	GGGAC	1 cut(s)	1685
BsmI	GAATGC	2 cut(s)	1386, 1469
BsnI	GGCC	5 cut(s)	42, 86, 173, 177, 469
Bso31I	GGTCTC	1 cut(s)	1717
BsoBI	CYCGRG	3 cut(s)	68, 158, 239
Bsp1286I	GDGCHC	1 cut(s)	75
Bsp13I	TCCGGA	1 cut(s)	1715
Bsp1407I	TGTACA	1 cut(s)	841
Bsp143I	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1652
Bsp19I	CCATGG	1 cut(s)	1367
BspACI	CCGC	7 cut(s)	34, 122, 147, 387, 440, 955, 1665
BspANI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BspCNI	CTCAG	2 cut(s)	36, 1374
BspDI	ATCGAT	1 cut(s)	1047
BspEI	TCCGGA	1 cut(s)	1715
BspHI	TCATGA	2 cut(s)	1056, 1444
BspLI	GGNNCC	7 cut(s)	32, 50, 188, 194, 244, 510, 1701
BspPI	GGATC	6 cut(s)	43, 56, 181, 194, 737, 1052
BspTI	CTTAAG	2 cut(s)	296, 1543
BspTNI	GGTCTC	1 cut(s)	1717
BsrFI	RCCGGY	1 cut(s)	173
BsrGI	TGTACA	1 cut(s)	841
BssAI	RCCGGY	1 cut(s)	173
BssECI	CCNNGG	7 cut(s)	81, 157, 158, 168, 983, 1040, 1367
BssMI	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1652
BssNI	GRCGYC	1 cut(s)	1743
BssSI	CACGAG	2 cut(s)	514, 1125
BssT1I	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
Bst2BI	CACGAG	2 cut(s)	514, 1125
Bst4CI	ACNGT	6 cut(s)	604, 775, 894, 922, 1259, 1320
Bst6I	CTCTTC	3 cut(s)	674, 814, 1411
BstACI	GRCGYC	1 cut(s)	1743
BstAFI	CTTAAG	2 cut(s)	296, 1543
BstAPI	GCANNNNNTGC	2 cut(s)	389, 1464
BstAUI	TGTACA	1 cut(s)	841
BstC8I	GCNNGC	7 cut(s)	75, 175, 501, 765, 974, 1008, 1456
BstDEI	CTNAG	3 cut(s)	44, 735, 1382
BstDSI	CCRYGG	1 cut(s)	1367
BstENI	CCTNNNNNAGG	2 cut(s)	654, 679
BstF5I	GGATG	5 cut(s)	5, 313, 383, 1085, 1089
BstKTI	GATC	6 cut(s)	51, 189, 745, 1047, 1534, 1655
BstMAI	GTCTC	4 cut(s)	809, 1574, 1599, 1717
BstMBI	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1652
BstMCI	CGRYCG	1 cut(s)	147
BstMWI	GCNNNNNNNGC	5 cut(s)	83, 273, 389, 1464, 1521
BstNSI	RCATGY	2 cut(s)	831, 1116
BstSCI	CCNGG	4 cut(s)	8, 102, 157, 158
BstV1I	GCAGC	4 cut(s)	278, 376, 1022, 1164
BstV2I	GAAGAC	2 cut(s)	100, 1569
BstX2I	RGATCY	3 cut(s)	48, 186, 1531
BstXI	CCANNNNNNTGG	1 cut(s)	253
BstYI	RGATCY	3 cut(s)	48, 186, 1531
Bsu15I	ATCGAT	1 cut(s)	1047
Bsu36I	CCTNAGG	2 cut(s)	44, 735
BsuI	GTATCC	1 cut(s)	1028
BsuRI	GGCC	5 cut(s)	42, 86, 173, 177, 469
BsuTUI	ATCGAT	1 cut(s)	1047
BtgI	CCRYGG	1 cut(s)	1367
BtsCI	GGATG	5 cut(s)	5, 313, 383, 1085, 1089
BtsIMutI	CAGTG	7 cut(s)	927, 1144, 1440, 1600, 1607, 1614, 1655
Cac8I	GCNNGC	7 cut(s)	75, 175, 501, 765, 974, 1008, 1456
CaiI	CAGNNNCTG	1 cut(s)	208
CciI	TCATGA	2 cut(s)	1056, 1444
Cfr10I	RCCGGY	1 cut(s)	173
Cfr13I	GGNCC	3 cut(s)	40, 243, 1699
Cfr9I	CCCGGG	1 cut(s)	158
ClaI	ATCGAT	1 cut(s)	1047
CseI	GACGC	1 cut(s)	550
Csp6I	GTAC	3 cut(s)	842, 1331, 1354
CspCI	CAANNNNNGTGG	2 cut(s)	1416, 1451
CviAII	CATG	7 cut(s)	130, 828, 1057, 1113, 1230, 1368, 1445
CviQI	GTAC	3 cut(s)	842, 1331, 1354
DdeI	CTNAG	3 cut(s)	44, 735, 1382
DpnI	GATC	6 cut(s)	50, 188, 744, 1046, 1533, 1654
DpnII	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1652
Eam1104I	CTCTTC	3 cut(s)	674, 814, 1411
EarI	CTCTTC	3 cut(s)	674, 814, 1411
Eco130I	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
Eco147I	AGGCCT	1 cut(s)	86
Eco31I	GGTCTC	1 cut(s)	1717
Eco32I	GATATC	1 cut(s)	522
Eco47I	GGWCC	2 cut(s)	243, 1699
Eco57I	CTGAAG	1 cut(s)	1503
Eco81I	CCTNAGG	2 cut(s)	44, 735
Eco88I	CYCGRG	3 cut(s)	68, 158, 239
EcoNI	CCTNNNNNAGG	2 cut(s)	654, 679
EcoO109I	RGGNCCY	2 cut(s)	40, 1699
EcoRI	GAATTC	1 cut(s)	1647
EcoRV	GATATC	1 cut(s)	522
EcoT14I	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
EcoT22I	ATGCAT	1 cut(s)	1495
ErhI	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
FaeI	CATG	7 cut(s)	133, 831, 1060, 1116, 1233, 1371, 1448
FalI	AAGNNNNNCTT	4 cut(s)	308, 340, 457, 489
FaqI	GGGAC	1 cut(s)	1685
FatI	CATG	7 cut(s)	129, 827, 1056, 1112, 1229, 1367, 1444
FauI	CCCGC	2 cut(s)	129, 948
FauNDI	CATATG	1 cut(s)	1489
Fnu4HI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1665
FokI	GGATG	4 cut(s)	320, 370, 1092, 1096
FseI	GGCCGGCC	1 cut(s)	177
Fsp4HI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1665
FspBI	CTAG	4 cut(s)	359, 813, 1026, 1094
GluI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1665
GsaI	CCCAGC	4 cut(s)	276, 396, 507, 1066
GsuI	CTGGAG	3 cut(s)	185, 1577, 1610
HaeIII	GGCC	5 cut(s)	42, 86, 173, 177, 469
HgaI	GACGC	1 cut(s)	550
Hin1I	GRCGYC	1 cut(s)	1743
Hin1II	CATG	7 cut(s)	133, 831, 1060, 1116, 1233, 1371, 1448
HincII	GTYRAC	2 cut(s)	1509, 1636
HindII	GTYRAC	2 cut(s)	1509, 1636
HindIII	AAGCTT	2 cut(s)	317, 497
HinfI	GANTC	7 cut(s)	205, 378, 665, 1187, 1448, 1592, 1627
HphI	GGTGA	7 cut(s)	650, 674, 752, 774, 1142, 1316, 1531
Hpy166II	GTNNAC	3 cut(s)	1144, 1509, 1636
Hpy188I	TCNGA	7 cut(s)	24, 592, 600, 670, 1192, 1383, 1392
Hpy8I	GTNNAC	3 cut(s)	1144, 1509, 1636
HpyAV	CCTTC	2 cut(s)	459, 842
HpyCH4III	ACNGT	6 cut(s)	604, 775, 894, 922, 1259, 1320
HpyCH4IV	ACGT	1 cut(s)	1743
HpyCH4V	TGCA	8 cut(s)	752, 972, 1087, 1112, 1407, 1454, 1467, 1493
HpyF10VI	GCNNNNNNNGC	5 cut(s)	83, 273, 389, 1464, 1521
HpyF3I	CTNAG	3 cut(s)	44, 735, 1382
HpySE526I	ACGT	1 cut(s)	1743
Hsp92I	GRCGYC	1 cut(s)	1743
Hsp92II	CATG	7 cut(s)	133, 831, 1060, 1116, 1233, 1371, 1448
Kpn2I	TCCGGA	1 cut(s)	1715
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
Kzo9I	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1652
LmnI	GCTCC	3 cut(s)	204, 1071, 1381
Lsp1109I	GCAGC	4 cut(s)	278, 376, 1022, 1164
LweI	GCATC	4 cut(s)	392, 942, 1039, 1074
MaeI	CTAG	4 cut(s)	359, 813, 1026, 1094
MaeII	ACGT	1 cut(s)	1743
MaeIII	GTNAC	3 cut(s)	1598, 1605, 1612
MalI	GATC	6 cut(s)	50, 188, 744, 1046, 1533, 1654
MboI	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1652
MflI	RGATCY	3 cut(s)	48, 186, 1531
MhlI	GDGCHC	1 cut(s)	75
MluCI	AATT	8 cut(s)	91, 577, 641, 794, 940, 1001, 1410, 1647
MlyI	GAGTC	3 cut(s)	214, 674, 1601
MmeI	TCCRAC	1 cut(s)	623
Mph1103I	ATGCAT	1 cut(s)	1495
MroI	TCCGGA	1 cut(s)	1715
MroNI	GCCGGC	1 cut(s)	173
MseI	TTAA	7 cut(s)	261, 297, 366, 686, 1121, 1335, 1544
MspA1I	CMGCKG	1 cut(s)	389
MspCI	CTTAAG	2 cut(s)	296, 1543
MspR9I	CCNGG	4 cut(s)	10, 104, 159, 160
Mva1269I	GAATGC	2 cut(s)	1386, 1469
MwoI	GCNNNNNNNGC	5 cut(s)	83, 273, 389, 1464, 1521
NaeI	GCCGGC	1 cut(s)	175
NciI	CCSGG	4 cut(s)	10, 104, 159, 160
NcoI	CCATGG	1 cut(s)	1367
NdeI	CATATG	1 cut(s)	1489
NdeII	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1652
NgoMIV	GCCGGC	1 cut(s)	173
NlaIII	CATG	7 cut(s)	133, 831, 1060, 1116, 1233, 1371, 1448
NlaIV	GGNNCC	7 cut(s)	32, 50, 188, 194, 244, 510, 1701
NmuCI	GTSAC	3 cut(s)	1598, 1605, 1612
NsiI	ATGCAT	1 cut(s)	1495
NspI	RCATGY	2 cut(s)	831, 1116
PaeR7I	CTCGAG	1 cut(s)	68
PagI	TCATGA	2 cut(s)	1056, 1444
PceI	AGGCCT	1 cut(s)	86
PctI	GAATGC	2 cut(s)	1386, 1469
PdiI	GCCGGC	1 cut(s)	175
PfeI	GAWTC	4 cut(s)	378, 1187, 1448, 1627
PflMI	CCANNNNNTGG	1 cut(s)	208
PkrI	GCNGC	5 cut(s)	293, 391, 1012, 1179, 1666
PleI	GAGTC	3 cut(s)	213, 673, 1600
PpsI	GAGTC	3 cut(s)	213, 673, 1600
PpuMI	RGGWCCY	1 cut(s)	1699
Psp5II	RGGWCCY	1 cut(s)	1699
PspFI	CCCAGC	4 cut(s)	272, 392, 503, 1062
PspN4I	GGNNCC	7 cut(s)	32, 50, 188, 194, 244, 510, 1701
PspPI	GGNCC	3 cut(s)	40, 243, 1699
PspPPI	RGGWCCY	1 cut(s)	1699
PstNI	CAGNNNCTG	1 cut(s)	208
PsuI	RGATCY	3 cut(s)	48, 186, 1531
RigI	GGCCGGCC	1 cut(s)	177
RsaI	GTAC	3 cut(s)	843, 1332, 1355
RsaNI	GTAC	3 cut(s)	842, 1331, 1354
SaqAI	TTAA	7 cut(s)	261, 297, 366, 686, 1121, 1335, 1544
SatI	GCNGC	5 cut(s)	292, 390, 1011, 1178, 1665
Sau3AI	GATC	6 cut(s)	48, 186, 742, 1044, 1531, 1652
Sau96I	GGNCC	3 cut(s)	40, 243, 1699
SchI	GAGTC	3 cut(s)	214, 674, 1601
ScrFI	CCNGG	4 cut(s)	10, 104, 159, 160
SduI	GDGCHC	1 cut(s)	75
SfaNI	GCATC	4 cut(s)	392, 942, 1039, 1074
Sfr274I	CTCGAG	1 cut(s)	68
SinI	GGWCC	2 cut(s)	243, 1699
SlaI	CTCGAG	1 cut(s)	68
SmaI	CCCGGG	1 cut(s)	160
SmlI	CTYRAG	5 cut(s)	68, 230, 296, 1070, 1543
SmoI	CTYRAG	5 cut(s)	68, 230, 296, 1070, 1543
Sse9I	AATT	8 cut(s)	91, 577, 641, 794, 940, 1001, 1410, 1647
SseBI	AGGCCT	1 cut(s)	86
SsiI	CCGC	7 cut(s)	34, 122, 147, 387, 440, 955, 1665
SspMI	CTAG	4 cut(s)	359, 813, 1026, 1094
StuI	AGGCCT	1 cut(s)	86
StyD4I	CCNGG	4 cut(s)	8, 102, 157, 158
StyI	CCWWGG	5 cut(s)	81, 168, 983, 1040, 1367
TaaI	ACNGT	6 cut(s)	604, 775, 894, 922, 1259, 1320
TaiI	ACGT	1 cut(s)	1746
TaqI	TCGA	7 cut(s)	69, 117, 213, 699, 726, 1047, 1651
TasI	AATT	8 cut(s)	91, 577, 641, 794, 940, 1001, 1410, 1647
TatI	WGTACW	3 cut(s)	841, 1330, 1353
TauI	GCSGC	1 cut(s)	1667
TfiI	GAWTC	4 cut(s)	378, 1187, 1448, 1627
Tru1I	TTAA	7 cut(s)	261, 297, 366, 686, 1121, 1335, 1544
Tru9I	TTAA	7 cut(s)	261, 297, 366, 686, 1121, 1335, 1544
TscAI	CASTG	7 cut(s)	927, 1151, 1440, 1607, 1614, 1621, 1662
TseFI	GTSAC	3 cut(s)	1598, 1605, 1612
TseI	GCWGC	4 cut(s)	291, 389, 1010, 1177
Tsp45I	GTSAC	3 cut(s)	1598, 1605, 1612
TspDTI	ATGAA	2 cut(s)	146, 636
TspMI	CCCGGG	1 cut(s)	158
TspRI	CASTG	7 cut(s)	927, 1151, 1440, 1607, 1614, 1621, 1662
Van91I	CCANNNNNTGG	1 cut(s)	208
Vha464I	CTTAAG	2 cut(s)	296, 1543
VpaK11BI	GGWCC	2 cut(s)	243, 1699
XagI	CCTNNNNNAGG	2 cut(s)	654, 679
XapI	RAATTY	3 cut(s)	641, 794, 1647
XbaI	TCTAGA	2 cut(s)	358, 812
XceI	RCATGY	2 cut(s)	831, 1116
XhoI	CTCGAG	1 cut(s)	68
XmaI	CCCGGG	1 cut(s)	158
XspI	CTAG	4 cut(s)	359, 813, 1026, 1094
ZraI	GACGTC	1 cut(s)	1744
Zsp2I	ATGCAT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.