MD17G1214500.v1.1

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0011646
Physical Location & Seq
Reverse (-)
26117899 .. 26121122
3224 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1214500.v1.1.491

Sequence Viewer

Length: 1857 bp
ATGGAGTTTGAGTCTTATGATGATGCTTATAATTATTACAACTGCTATGCTAAGGAAGTGGGATTTCGTGTTAGAGTGAAGAATTCATGGTTTAAGAGGAACAGCAGAGAGAAGTATGGTGCCGTGCTTTGTTGCAGCAGCCAGGGTTTCAAAAGAATTAAAGATGTGAACCGTTTGAGGAAGGAAACGAGAACTGGATGTCCTGCAATGTTAAGGATGAGATTAGTGGACTCCAAAAGGTGGAGGATACTTGAAGTTACACTTGAGCATAACCATTTGCTGGGTGCTAAAATGTACAAATCGATTAACAAGATGGGAAGTGGAACTAAAAGGAAGTCACAGTCAAGTTCAGATGCAGAAAAACGAACAATTAAGTTGTACCGAGCACTTGTAATAGATTCAGGGGGCAATGGGACCTCAAATTCGAGTATAGCAGATATCAGGACTTTTTCTGATCATCCGGATCAGTTGAACCTTAAAAAAGGTGATACACAAGCAATCTATAATTACCTTTGCCGAATGCAGTTGACCAATCCTAACTTCTTTTACTTGATGGATTTTAATGATGACGGGCTGCTAAGGAATGTGTTCTGGATTGACGCTAGGTGCAGGGCAGCATGTGGTTATTTTGGTGATGTGATATACTTTGACAACACATATTTGTCAAACAAGTATGACATCCCACTTGTGGCGTTTGTAGGGATCAATCACCATGGCCAGGCAGTATTGCTTGGTTGTGCTCTACTTGCTGGGGAGACAACGGAATCTTATACTTGGTTGTTCAAAGCTTGGCTTACATGTGTATCAGGACATTCTCCACAAACCATTATTACTGACAGGTGCAAGGCTTTGCAGAGTGCAATTGCAGAAGTATTTCCAAGATCTCATCATCGTTTTGGTTTATCACACATCATGAAGAAAATTCCAGAAAAACTGGGAGGGTTGCGCAACTATGATGCCATCAGGAAGGCATTGACTAAAGCAGTTTATGAAACTCTGAAGGTGATCGAATTCGAAGCAGCCTGGAGGTTCATGATTCAGCGTTTTGGAGTCGGTGATCATGAGTGGCTTCGATCTTTATATGAAGAACGGTTTTGGTGGGCTCCTGTTTATTTGAAAGAGACATTTTTTGCTGGAATGGTGGCTGCACGTCCGGGTGAAGCCTTAAGTCCATTTTTTGACAGATATGTACACAAACAAACTCCACTGAAAGAATTTCTTGATAAGTATGAACTGGCTCTCCAAAAGAAGCATAAGGACGAAGCTCTTGCAGATATCGAGTCAAGAAGCGCGAGTCCCACATTGAAAACAAGATGTTCCTTTGAGTTACAGCTTTCAAAAGTTTACACTAGAGAAATATTCGAGAAGTTCCAATTTGAAGTGGAGGAGATGTATTCTTGTCTTAGCACTACACAGTTACATGTTGATGGGCCAATCATAATATTCTTGGTCAAGGAGCGTGTTGTCGTCGAGGGAAATAGGCGAGAGATAAGAGATTATGAAGTCCTGTACAACAGAACAGCAGGTGAGGTTCGTTGCATTTGCAGCTGCTTTAACTTTTACGGGTATTTATGTCGGCATGCATTGTGTGTGCTTAATTATAACGGGGTAGAGGAGATCCCTTCGAAGTACATTTTGTCGCGATGGAAGAAGGATTACAAGCGTTTATATATTCCAGATCAAGGGTCCAGTAATGTTGACGCCACCGACCGCGTGCAATGGTTCAATCAGTTGTATAGAAGTGCCTTGCACATTGTAGAGGAAGGTGTGATTTCTCTTGACCATTACAAAGTAGCATTGCAAGCATTCGAAGAGTCGTTGGATCGGGTTCATGTCGTAGAAGACAAGCATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

619

Amino Acids

71.97

Weight (kDa)

8.84

Isoelectric Point (pI)

40.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 11 - 94 2.6e-22 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 186 - 295 1e-05 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 213 - 307 9.1e-35 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011646)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G52520
fragaria_vesca FvH4_6g29431 FvH4_6g29431 FvH4_6g29431
malus_domestica MD17G1214500.v1.1
prunus_persica Prupe.3G090400_v2.0.a1 Prupe.3G090400_v2.0.a1
pyrus_communis pycom17g21910
rosa_chinensis RchiOBHm_Chr2g0134901
rosa_laevigata RLG00000019428
rosa_multiflora Rmu_sc0007475.1_g000011 Rmu_ssc0000401.1_g000001
rosa_roxburghii Rroxscaffold_2G00109670
rosa_rugosa Rorug02G0321100
rosa_samantha Rh2AG372800 Rh2BG378600 Rh2CG357300 Rh2DG395300
rosa_wichuraiana Rw2G030380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 30, 1602
AarI CACCTGC 1 cut(s) 1514
Acc16I TGCGCA 1 cut(s) 947
Acc36I ACCTGC 1 cut(s) 1514
AccB1I GGYRCC 1 cut(s) 119
AccB7I CCANNNNNTGG 2 cut(s) 240, 280
AccII CGCG 3 cut(s) 1292, 1642, 1713
AccIII TCCGGA 1 cut(s) 460
AciI CCGC 1 cut(s) 1711
AclWI GGATC 4 cut(s) 471, 710, 1612, 1830
AcoI YGGCCR 1 cut(s) 715
AcsI RAATTY 5 cut(s) 82, 421, 921, 1010, 1214
AcuI CTGAAG 1 cut(s) 1019
AcyI GRCGYC 1 cut(s) 1701
AfaI GTAC 5 cut(s) 296, 380, 1191, 1511, 1631
AfiI CCNNNNNNNGG 5 cut(s) 240, 280, 688, 718, 1682
AflII CTTAAG 1 cut(s) 1165
AflIII ACRYGT 2 cut(s) 797, 1420
AgsI TTSAA 9 cut(s) 151, 254, 472, 784, 1117, 1306, 1338, 1379, 1726
AjiI CACGTC 1 cut(s) 1151
AjnI CCWGG 3 cut(s) 141, 717, 1022
AjuI GAANNNNNNNTTGG 2 cut(s) 524, 556
AloI GAACNNNNNNTCC 4 cut(s) 184, 216, 1224, 1256
AluBI AGCT 4 cut(s) 788, 1265, 1333, 1548
AluI AGCT 4 cut(s) 788, 1265, 1333, 1548
Alw21I GWGCWC 2 cut(s) 388, 742
Alw26I GTCTC 2 cut(s) 749, 1115
AlwI GGATC 4 cut(s) 471, 710, 1612, 1830
Aor13HI TCCGGA 1 cut(s) 460
AoxI GGCC 2 cut(s) 715, 1430
ApeKI GCWGC 8 cut(s) 135, 138, 574, 614, 1019, 1145, 1545, 1548
ApoI RAATTY 5 cut(s) 82, 421, 921, 1010, 1214
ArsI GACNNNNNNTTYG 2 cut(s) 406, 438
Asp700I GAANNNNTTC 2 cut(s) 587, 873
AspLEI GCGC 2 cut(s) 948, 1292
AspS9I GGNCC 3 cut(s) 414, 1430, 1686
AsuC2I CCSGG 1 cut(s) 1155
AsuHPI GGTGA 7 cut(s) 497, 644, 701, 1015, 1067, 1169, 1538
AsuII TTCGAA 3 cut(s) 1014, 1625, 1809
AvaII GGWCC 2 cut(s) 414, 1686
BaeI ACNNNNGTAYC 2 cut(s) 786, 819
BalI TGGCCA 1 cut(s) 717
BanI GGYRCC 1 cut(s) 119
BanII GRGCYC 1 cut(s) 1105
BarI GAAGNNNNNNTAC 2 cut(s) 1640, 1672
BbsI GAAGAC 1 cut(s) 1848
Bbv12I GWGCWC 2 cut(s) 388, 742
BbvI GCAGC 8 cut(s) 147, 150, 561, 626, 1031, 1132, 1535, 1557
BccI CCATC 5 cut(s) 307, 547, 968, 1421, 1638
BceAI ACGGC 1 cut(s) 107
BcgI CGANNNNNNTGC 2 cut(s) 1250, 1284
BciT130I CCWGG 3 cut(s) 143, 719, 1024
BciVI GTATCC 1 cut(s) 240
BclI TGATCA 2 cut(s) 454, 1057
BcnI CCSGG 1 cut(s) 1155
BcoDI GTCTC 2 cut(s) 749, 1115
BfaI CTAG 2 cut(s) 603, 1350
BfrI CTTAAG 1 cut(s) 1165
BfuAI ACCTGC 1 cut(s) 1514
BfuI GTATCC 1 cut(s) 240
BglII AGATCT 1 cut(s) 881
BisI GCNGC 8 cut(s) 136, 139, 575, 615, 1020, 1146, 1546, 1549
BlsI GCNGC 8 cut(s) 137, 140, 576, 616, 1021, 1147, 1547, 1550
Bme1390I CCNGG 4 cut(s) 143, 719, 1024, 1155
Bme18I GGWCC 2 cut(s) 414, 1686
BmgBI CACGTC 1 cut(s) 1151
BmgT120I GGNCC 3 cut(s) 414, 1430, 1686
BmiI GGNNCC 4 cut(s) 121, 415, 1104, 1687
BmrFI CCNGG 4 cut(s) 143, 719, 1024, 1155
BmrI ACTGGG 1 cut(s) 944
BmsI GCATC 3 cut(s) 13, 343, 946
BmuI ACTGGG 1 cut(s) 944
BpiI GAAGAC 1 cut(s) 1848
BpmI CTGGAG 1 cut(s) 1045
Bpu10I CCTNAGC 2 cut(s) 51, 578
Bpu14I TTCGAA 3 cut(s) 1014, 1625, 1809
BpuEI CTTGAG 1 cut(s) 284
BpuMI CCSGG 1 cut(s) 1155
Bsa29I ATCGAT 1 cut(s) 302
BsaHI GRCGYC 1 cut(s) 1701
BsaJI CCNNGG 2 cut(s) 142, 712
BsaWI WCCGGW 1 cut(s) 460
BsaXI ACNNNNNCTCC 5 cut(s) 26, 1224, 1254, 1376, 1406
Bsc4I CCNNNNNNNGG 5 cut(s) 240, 280, 688, 718, 1682
Bse1I ACTGG 4 cut(s) 199, 939, 1239, 1689
Bse3DI GCAATG 4 cut(s) 213, 415, 1724, 1796
BseAI TCCGGA 1 cut(s) 460
BseBI CCWGG 3 cut(s) 143, 719, 1024
BseCI ATCGAT 1 cut(s) 302
BseDI CCNNGG 2 cut(s) 142, 712
BseGI GGATG 4 cut(s) 203, 222, 457, 678
BseLI CCNNNNNNNGG 5 cut(s) 240, 280, 688, 718, 1682
BseMI GCAATG 4 cut(s) 213, 415, 1724, 1796
BseNI ACTGG 4 cut(s) 199, 939, 1239, 1689
BseRI GAGGAG 2 cut(s) 1400, 1628
BseXI GCAGC 8 cut(s) 147, 150, 561, 626, 1031, 1132, 1535, 1557
BseYI CCCAGC 2 cut(s) 280, 749
BsgI GTGCAG 2 cut(s) 628, 1131
Bsh1236I CGCG 3 cut(s) 1292, 1642, 1713
Bsh1285I CGRYCG 1 cut(s) 1711
BshFI GGCC 2 cut(s) 717, 1432
BshNI GGYRCC 1 cut(s) 119
BshVI ATCGAT 1 cut(s) 302
BsiEI CGRYCG 1 cut(s) 1711
BsiHKAI GWGCWC 2 cut(s) 388, 742
BsiSI CCGG 2 cut(s) 461, 1154
BslFI GGGAC 2 cut(s) 427, 1281
BslI CCNNNNNNNGG 5 cut(s) 240, 280, 688, 718, 1682
BsmAI GTCTC 2 cut(s) 749, 1115
BsmFI GGGAC 2 cut(s) 427, 1281
BsmI GAATGC 2 cut(s) 525, 1805
BsnI GGCC 2 cut(s) 717, 1432
Bsp119I TTCGAA 3 cut(s) 1014, 1625, 1809
Bsp1286I GDGCHC 3 cut(s) 388, 742, 1105
Bsp13I TCCGGA 1 cut(s) 460
Bsp1407I TGTACA 3 cut(s) 294, 1189, 1509
Bsp19I CCATGG 1 cut(s) 712
Bsp68I TCGCGA 1 cut(s) 1642
BspACI CCGC 1 cut(s) 1711
BspANI GGCC 2 cut(s) 717, 1432
BspDI ATCGAT 1 cut(s) 302
BspEI TCCGGA 1 cut(s) 460
BspFNI CGCG 3 cut(s) 1292, 1642, 1713
BspHI TCATGA 3 cut(s) 912, 1032, 1060
BspLI GGNNCC 4 cut(s) 121, 415, 1104, 1687
BspMI ACCTGC 1 cut(s) 1514
BspPI GGATC 4 cut(s) 471, 710, 1612, 1830
BspT104I TTCGAA 3 cut(s) 1014, 1625, 1809
BspT107I GGYRCC 1 cut(s) 119
BspTI CTTAAG 1 cut(s) 1165
BsrDI GCAATG 4 cut(s) 213, 415, 1724, 1796
BsrGI TGTACA 3 cut(s) 294, 1189, 1509
BsrI ACTGG 4 cut(s) 199, 939, 1239, 1689
BssECI CCNNGG 2 cut(s) 142, 712
BssNI GRCGYC 1 cut(s) 1701
BssT1I CCWWGG 1 cut(s) 712
Bst2UI CCWGG 3 cut(s) 143, 719, 1024
Bst4CI ACNGT 4 cut(s) 173, 342, 1092, 1416
Bst6I CTCTTC 1 cut(s) 1806
BstACI GRCGYC 1 cut(s) 1701
BstAFI CTTAAG 1 cut(s) 1165
BstAUI TGTACA 3 cut(s) 294, 1189, 1509
BstBI TTCGAA 3 cut(s) 1014, 1625, 1809
BstC8I GCNNGC 3 cut(s) 1581, 1715, 1803
BstDEI CTNAG 3 cut(s) 51, 578, 1403
BstDSI CCRYGG 1 cut(s) 712
BstF5I GGATG 4 cut(s) 203, 222, 457, 678
BstFNI CGCG 3 cut(s) 1292, 1642, 1713
BstHHI GCGC 2 cut(s) 948, 1292
BstMAI GTCTC 2 cut(s) 749, 1115
BstMCI CGRYCG 1 cut(s) 1711
BstMWI GCNNNNNNNGC 3 cut(s) 746, 1545, 1802
BstNI CCWGG 3 cut(s) 143, 719, 1024
BstNSI RCATGY 4 cut(s) 621, 801, 1424, 1583
BstSCI CCNGG 4 cut(s) 141, 717, 1022, 1153
BstUI CGCG 3 cut(s) 1292, 1642, 1713
BstV1I GCAGC 8 cut(s) 147, 150, 561, 626, 1031, 1132, 1535, 1557
BstV2I GAAGAC 1 cut(s) 1848
BstX2I RGATCY 2 cut(s) 881, 1617
BstYI RGATCY 2 cut(s) 881, 1617
Bsu15I ATCGAT 1 cut(s) 302
BsuI GTATCC 1 cut(s) 240
BsuRI GGCC 2 cut(s) 717, 1432
BsuTUI ATCGAT 1 cut(s) 302
BtgI CCRYGG 1 cut(s) 712
BtgZI GCGATG 1 cut(s) 1657
BtrI CACGTC 1 cut(s) 1151
BtsCI GGATG 4 cut(s) 203, 222, 457, 678
BtsIMutI CAGTG 1 cut(s) 1205
BtuMI TCGCGA 1 cut(s) 1642
BveI ACCTGC 1 cut(s) 1514
Cac8I GCNNGC 3 cut(s) 1581, 1715, 1803
CciI TCATGA 3 cut(s) 912, 1032, 1060
CfoI GCGC 2 cut(s) 948, 1292
Cfr13I GGNCC 3 cut(s) 414, 1430, 1686
ClaI ATCGAT 1 cut(s) 302
CseI GACGC 2 cut(s) 608, 1709
Csp6I GTAC 5 cut(s) 295, 379, 1190, 1510, 1630
CviQI GTAC 5 cut(s) 295, 379, 1190, 1510, 1630
DdeI CTNAG 3 cut(s) 51, 578, 1403
EaeI YGGCCR 1 cut(s) 715
Eam1104I CTCTTC 1 cut(s) 1806
EarI CTCTTC 1 cut(s) 1806
Eco130I CCWWGG 1 cut(s) 712
Eco24I GRGCYC 1 cut(s) 1105
Eco32I GATATC 2 cut(s) 439, 1276
Eco47I GGWCC 2 cut(s) 414, 1686
Eco57I CTGAAG 1 cut(s) 1019
EcoO109I RGGNCCY 1 cut(s) 414
EcoRI GAATTC 2 cut(s) 82, 1010
EcoRII CCWGG 3 cut(s) 141, 717, 1022
EcoRV GATATC 2 cut(s) 439, 1276
EcoT14I CCWWGG 1 cut(s) 712
EcoT22I ATGCAT 1 cut(s) 1585
EcoT38I GRGCYC 1 cut(s) 1105
ErhI CCWWGG 1 cut(s) 712
FalI AAGNNNNNCTT 6 cut(s) 246, 278, 777, 809, 1203, 1235
FaqI GGGAC 2 cut(s) 427, 1281
FbaI TGATCA 2 cut(s) 454, 1057
Fnu4HI GCNGC 8 cut(s) 136, 139, 575, 615, 1020, 1146, 1546, 1549
FokI GGATG 4 cut(s) 210, 229, 444, 665
FriOI GRGCYC 1 cut(s) 1105
Fsp4HI GCNGC 8 cut(s) 136, 139, 575, 615, 1020, 1146, 1546, 1549
FspBI CTAG 2 cut(s) 603, 1350
FspI TGCGCA 1 cut(s) 947
GlaI GCGC 2 cut(s) 947, 1291
GluI GCNGC 8 cut(s) 136, 139, 575, 615, 1020, 1146, 1546, 1549
GsaI CCCAGC 2 cut(s) 284, 753
GsuI CTGGAG 1 cut(s) 1045
HaeIII GGCC 2 cut(s) 717, 1432
HapII CCGG 2 cut(s) 461, 1154
HgaI GACGC 2 cut(s) 608, 1709
HhaI GCGC 2 cut(s) 948, 1292
Hin1I GRCGYC 1 cut(s) 1701
Hin6I GCGC 2 cut(s) 946, 1290
HinP1I GCGC 2 cut(s) 946, 1290
HincII GTYRAC 2 cut(s) 528, 1699
HindII GTYRAC 2 cut(s) 528, 1699
HindIII AAGCTT 1 cut(s) 786
HinfI GANTC 9 cut(s) 11, 230, 398, 764, 1036, 1050, 1280, 1294, 1814
HpaII CCGG 2 cut(s) 461, 1154
HphI GGTGA 7 cut(s) 497, 644, 701, 1015, 1067, 1169, 1538
Hpy166II GTNNAC 6 cut(s) 169, 229, 528, 1192, 1345, 1699
Hpy188I TCNGA 3 cut(s) 352, 454, 999
Hpy8I GTNNAC 6 cut(s) 169, 229, 528, 1192, 1345, 1699
Hpy99I CGWCG 1 cut(s) 1472
HpyAV CCTTC 6 cut(s) 175, 961, 994, 1632, 1645, 1757
HpyCH4III ACNGT 4 cut(s) 173, 342, 1092, 1416
HpyCH4IV ACGT 1 cut(s) 1150
HpyF10VI GCNNNNNNNGC 3 cut(s) 746, 1545, 1802
HpyF3I CTNAG 3 cut(s) 51, 578, 1403
HpySE526I ACGT 1 cut(s) 1150
Hsp92I GRCGYC 1 cut(s) 1701
HspAI GCGC 2 cut(s) 946, 1290
Kpn2I TCCGGA 1 cut(s) 460
Ksp22I TGATCA 2 cut(s) 454, 1057
LmnI GCTCC 2 cut(s) 1108, 1456
Lsp1109I GCAGC 8 cut(s) 147, 150, 561, 626, 1031, 1132, 1535, 1557
LweI GCATC 3 cut(s) 13, 343, 946
MaeI CTAG 2 cut(s) 603, 1350
MaeII ACGT 1 cut(s) 1150
MaeIII GTNAC 4 cut(s) 256, 336, 1326, 1416
MboII GAAGA 6 cut(s) 91, 928, 1097, 1660, 1823, 1853
MfeI CAATTG 1 cut(s) 861
MflI RGATCY 2 cut(s) 881, 1617
MhlI GDGCHC 3 cut(s) 388, 742, 1105
MlsI TGGCCA 1 cut(s) 717
MluNI TGGCCA 1 cut(s) 717
MlyI GAGTC 6 cut(s) 20, 224, 1059, 1289, 1303, 1823
MmeI TCCRAC 1 cut(s) 1800
Mox20I TGGCCA 1 cut(s) 717
Mph1103I ATGCAT 1 cut(s) 1585
MroI TCCGGA 1 cut(s) 460
MroXI GAANNNNTTC 2 cut(s) 587, 873
MscI TGGCCA 1 cut(s) 717
MslI CAYNNNNRTG 1 cut(s) 1425
Msp20I TGGCCA 1 cut(s) 717
MspA1I CMGCKG 1 cut(s) 1548
MspCI CTTAAG 1 cut(s) 1165
MspI CCGG 2 cut(s) 461, 1154
MspR9I CCNGG 4 cut(s) 143, 719, 1024, 1155
MunI CAATTG 1 cut(s) 861
Mva1269I GAATGC 2 cut(s) 525, 1805
MvaI CCWGG 3 cut(s) 143, 719, 1024
MvnI CGCG 3 cut(s) 1292, 1642, 1713
MwoI GCNNNNNNNGC 3 cut(s) 746, 1545, 1802
NciI CCSGG 1 cut(s) 1155
NcoI CCATGG 1 cut(s) 712
NlaIV GGNNCC 4 cut(s) 121, 415, 1104, 1687
NmuCI GTSAC 1 cut(s) 336
NruI TCGCGA 1 cut(s) 1642
NsbI TGCGCA 1 cut(s) 947
NsiI ATGCAT 1 cut(s) 1585
NspI RCATGY 4 cut(s) 621, 801, 1424, 1583
NspV TTCGAA 3 cut(s) 1014, 1625, 1809
PaeI GCATGC 1 cut(s) 1583
PagI TCATGA 3 cut(s) 912, 1032, 1060
PaqCI CACCTGC 1 cut(s) 1514
PciI ACATGT 2 cut(s) 797, 1420
PctI GAATGC 2 cut(s) 525, 1805
PdmI GAANNNNTTC 2 cut(s) 587, 873
PfeI GAWTC 3 cut(s) 398, 764, 1036
PflMI CCANNNNNTGG 2 cut(s) 240, 280
PkrI GCNGC 8 cut(s) 137, 140, 576, 616, 1021, 1147, 1547, 1550
PleI GAGTC 6 cut(s) 19, 224, 1058, 1288, 1302, 1822
PpsI GAGTC 6 cut(s) 19, 224, 1058, 1288, 1302, 1822
PpuMI RGGWCCY 1 cut(s) 414
PscI ACATGT 2 cut(s) 797, 1420
PsiI TTATAA 2 cut(s) 30, 1602
Psp5II RGGWCCY 1 cut(s) 414
Psp6I CCWGG 3 cut(s) 141, 717, 1022
PspFI CCCAGC 2 cut(s) 280, 749
PspGI CCWGG 3 cut(s) 141, 717, 1022
PspN4I GGNNCC 4 cut(s) 121, 415, 1104, 1687
PspPI GGNCC 3 cut(s) 414, 1430, 1686
PspPPI RGGWCCY 1 cut(s) 414
PsuI RGATCY 2 cut(s) 881, 1617
PvuII CAGCTG 1 cut(s) 1548
RruI TCGCGA 1 cut(s) 1642
RsaI GTAC 5 cut(s) 296, 380, 1191, 1511, 1631
RsaNI GTAC 5 cut(s) 295, 379, 1190, 1510, 1630
RseI CAYNNNNRTG 1 cut(s) 1425
SatI GCNGC 8 cut(s) 136, 139, 575, 615, 1020, 1146, 1546, 1549
Sau96I GGNCC 3 cut(s) 414, 1430, 1686
SchI GAGTC 6 cut(s) 20, 224, 1059, 1289, 1303, 1823
ScrFI CCNGG 4 cut(s) 143, 719, 1024, 1155
SduI GDGCHC 3 cut(s) 388, 742, 1105
SfaNI GCATC 3 cut(s) 13, 343, 946
SfuI TTCGAA 3 cut(s) 1014, 1625, 1809
SinI GGWCC 2 cut(s) 414, 1686
SmiMI CAYNNNNRTG 1 cut(s) 1425
SmlI CTYRAG 2 cut(s) 263, 1165
SmoI CTYRAG 2 cut(s) 263, 1165
SphI GCATGC 1 cut(s) 1583
SsiI CCGC 1 cut(s) 1711
SspI AATATT 2 cut(s) 1359, 1443
SspMI CTAG 2 cut(s) 603, 1350
StyD4I CCNGG 4 cut(s) 141, 717, 1022, 1153
StyI CCWWGG 1 cut(s) 712
TaaI ACNGT 4 cut(s) 173, 342, 1092, 1416
TaiI ACGT 1 cut(s) 1153
TatI WGTACW 4 cut(s) 294, 1189, 1509, 1629
TfiI GAWTC 3 cut(s) 398, 764, 1036
TscAI CASTG 1 cut(s) 1212
TseFI GTSAC 1 cut(s) 336
TseI GCWGC 8 cut(s) 135, 138, 574, 614, 1019, 1145, 1545, 1548
Tsp45I GTSAC 1 cut(s) 336
TspDTI ATGAA 8 cut(s) 75, 929, 1005, 1021, 1098, 1245, 1515, 1820
TspGWI ACGGA 1 cut(s) 776
TspRI CASTG 1 cut(s) 1212
Van91I CCANNNNNTGG 2 cut(s) 240, 280
Vha464I CTTAAG 1 cut(s) 1165
VpaK11BI GGWCC 2 cut(s) 414, 1686
XapI RAATTY 5 cut(s) 82, 421, 921, 1010, 1214
XceI RCATGY 4 cut(s) 621, 801, 1424, 1583
XmnI GAANNNNTTC 2 cut(s) 587, 873
XspI CTAG 2 cut(s) 603, 1350
Zsp2I ATGCAT 1 cut(s) 1585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.