Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007475.1

Orthogroup ID

OG0011646

Physical Location & Seq

Genomic Coordinates Reverse (-)

55913 .. 58551

Gene Structure 2639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007475.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

atgctcggactactaaaatacagaaccaaccagaggacctcgtcggccggccaaaccctcagtttccggagctacccatcttctcatcggatcctgttggtctctgaaattgttcgtttcttgaacttgaaagaccccgactgcaatgagattgcaactgacggagatggtgttttgacagaattggatgctgaaaatcgtgtcccagaaggaaaaaaggaatttgttgcgcctgctattggaatggagtttgagtcatatgaggatgcttataattattacaattgctatgctaaggaagtggggtttcgtgttagagtgaagaattcatggtttaagaggaacagtaaagagaagtatggtgctgttctttgttgcagcagtcaaggtttcaaaagaattaaagatgtgaaccgtttgagaaaggaaacaagaactggctgtcctgcaatgttaaggatgaggttagtggactccaaaaggtggagggtacttgaagttgctcttgaacataatcacttattaggtacaaagatctacaaatcgatgaaaaagatgggaagtggaacaaagaggaagtcacagtcaagttcagatgcagaaaagcgaacaattaagctgtaccgagcacttgtgatagattcagggggtaatggaccctcgaattcgaatgcaacagaagccaggaatgatattcccaatcagttgaacctcaaaaaaggtgacacacaagcaatttataattacctttgtcgtatgcagttgacaaatccgaatttcttttacttgatggacatcaatgacgatgggcgtttgagaaatgtgttttggattgatgctaggtcgagggcagcatgcggttatttttgtgatgtgatatatattgacaacacatacttggcaaataaatttgagatcccacttgtggcgttagtggggataaatcaccatggtcaagcagtgttgcttggttgtgctttgcttgctggggagacggcagagtcttatatttggttgttcaaagcttggcttacatgtgtgtcaggacattctccgcaaacaattattactgacaggtgcaatgttttgcagagtgcagttgctgaggtgtttcctagctgccatcatcgttttggtttgtccctgatcattaaaaaagttccagaaaagttgggtggatcgcgcaattatgatgccattaggaagacactgcttaaagcagtttatgaaagtctgaaggtgattgaatttgaagcagcatggggattcatgattcagcattttggagttagtgatcatgagtggcttcgatctttgtatgaggaccgatttaggtgggctccagtttacttgaaagagacatcttttgccggaatgtcggctgcacatccaggtgaaaccttgagtccattttttgacaaatacgtacacaagcaaactccactgaaagaatttctggataagtatgaattggctctacaaaagaagcataaggaagaagctcttgcagatattgagtcgagaagctcaagtcccatgttgaaaaccagatgttcttttgagttgcagctttcaaaagtttacacaaaagagatattcaaaaaattccaatttgaagtggaggagatgtattcttgttttagcactacacagttgcacattgatgggccaattgtaatattcttggtcaaggagcgtgtcgtggcagatgggaatcggcgagagataagagattatgaggttctgtacaacagaacagcaggtgaggttcggtgtatctgcagttgctttaacttccatgggtatctatgccggcatgctttgtgtgtccttaattttaatggagtggaggagatcccttccaagtacattctgtcacgatggaaaaaggattacaagcgtttatatattccagatcatggctccaataatgtcgatgttactgaccgtatgcagtggttcagtcagctgtatagaagtgccttgcaaattgtagaggaaggtgtgatctctcttgaccattacaatgtagcattgcaagcatttgaagagtctttgaaaagggttcacgagatagaagacaagcatgagcctgaaaacttgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

701

Amino Acids

80.77

Weight (kDa)

8.74

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011646)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52520
fragaria_vesca	FvH4_6g29431 FvH4_6g29431 FvH4_6g29431
malus_domestica	MD17G1214500.v1.1
prunus_persica	Prupe.3G090400_v2.0.a1 Prupe.3G090400_v2.0.a1
pyrus_communis	pycom17g21910
rosa_chinensis	RchiOBHm_Chr2g0134901
rosa_laevigata	RLG00000019428
rosa_multiflora	Rmu_sc0007475.1_g000011 Rmu_ssc0000401.1_g000001
rosa_roxburghii	Rroxscaffold_2G00109670
rosa_rugosa	Rorug02G0321100
rosa_samantha	Rh2AG372800 Rh2BG378600 Rh2CG357300 Rh2DG395300
rosa_wichuraiana	Rw2G030380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	273, 741
AarI	CACCTGC	1 cut(s)	1751
AasI	GACNNNNNNGTC	1 cut(s)	1000
Acc36I	ACCTGC	1 cut(s)	1751
AccB7I	CCANNNNNTGG	2 cut(s)	483, 1919
AccII	CGCG	1 cut(s)	1183
AccIII	TCCGGA	1 cut(s)	66
AciI	CCGC	2 cut(s)	858, 1055
AclWI	GGATC	5 cut(s)	85, 98, 910, 1186, 1849
AcoI	YGGCCR	2 cut(s)	45, 49
AcsI	RAATTY	8 cut(s)	221, 325, 664, 775, 908, 1247, 1451, 1604
AcuI	CTGAAG	1 cut(s)	1256
AfaI	GTAC	6 cut(s)	492, 529, 623, 1428, 1748, 1868
AfiI	CCNNNNNNNGG	5 cut(s)	33, 239, 483, 925, 1919
AflIII	ACRYGT	1 cut(s)	1034
AjnI	CCWGG	2 cut(s)	683, 1390
AjuI	GAANNNNNNNTTGG	2 cut(s)	811, 843
AloI	GAACNNNNNNTCC	2 cut(s)	427, 459
AluBI	AGCT	8 cut(s)	72, 619, 1025, 1119, 1502, 1527, 1570, 1969
AluI	AGCT	8 cut(s)	72, 619, 1025, 1119, 1502, 1527, 1570, 1969
Alw21I	GWGCWC	1 cut(s)	631
Alw26I	GTCTC	3 cut(s)	106, 986, 1352
AlwI	GGATC	5 cut(s)	85, 98, 910, 1186, 1849
AlwNI	CAGNNNCTG	1 cut(s)	1103
Aor13HI	TCCGGA	1 cut(s)	66
AoxI	GGCC	3 cut(s)	45, 49, 1667
ApeKI	GCWGC	6 cut(s)	378, 851, 1119, 1256, 1382, 1567
ApoI	RAATTY	8 cut(s)	221, 325, 664, 775, 908, 1247, 1451, 1604
ArsI	GACNNNNNNTTYG	2 cut(s)	563, 595
Asp700I	GAANNNNTTC	1 cut(s)	111
AspLEI	GCGC	2 cut(s)	232, 1185
AspS9I	GGNCC	4 cut(s)	36, 656, 1324, 1667
AsuHPI	GGTGA	5 cut(s)	734, 938, 1252, 1406, 1775
AsuII	TTCGAA	1 cut(s)	668
AvaII	GGWCC	3 cut(s)	36, 656, 1324
BamHI	GGATCC	1 cut(s)	90
BanII	GRGCYC	1 cut(s)	1342
BauI	CACGAG	1 cut(s)	2069
BbsI	GAAGAC	2 cut(s)	1211, 2085
Bbv12I	GWGCWC	1 cut(s)	631
BbvCI	CCTCAGC	1 cut(s)	1104
BbvI	GCAGC	6 cut(s)	390, 863, 1106, 1268, 1369, 1579
BccI	CCATC	9 cut(s)	85, 161, 550, 784, 800, 1131, 1658, 1703, 1875
BceAI	ACGGC	1 cut(s)	1011
BciT130I	CCWGG	2 cut(s)	685, 1392
BclI	TGATCA	2 cut(s)	1146, 1294
BcoDI	GTCTC	3 cut(s)	106, 986, 1352
BfaI	CTAG	2 cut(s)	840, 1116
BfmI	CTRYAG	1 cut(s)	1780
BfuAI	ACCTGC	1 cut(s)	1751
BglII	AGATCT	1 cut(s)	534
BisI	GCNGC	6 cut(s)	379, 852, 1120, 1257, 1383, 1568
BlsI	GCNGC	6 cut(s)	380, 853, 1121, 1258, 1384, 1569
Bme1390I	CCNGG	2 cut(s)	685, 1392
Bme18I	GGWCC	3 cut(s)	36, 656, 1324
BmgT120I	GGNCC	4 cut(s)	36, 656, 1324, 1667
BmiI	GGNNCC	4 cut(s)	92, 658, 1341, 1924
BmrFI	CCNGG	2 cut(s)	685, 1392
BmsI	GCATC	5 cut(s)	178, 256, 586, 826, 1183
BpiI	GAAGAC	2 cut(s)	1211, 2085
BpmI	CTGGAG	1 cut(s)	1326
Bpu10I	CCTNAGC	2 cut(s)	294, 1104
Bpu14I	TTCGAA	1 cut(s)	668
BpuEI	CTTGAG	2 cut(s)	1423, 1513
Bsa29I	ATCGAT	1 cut(s)	545
BsaAI	YACGTR	1 cut(s)	1426
BsaBI	GATNNNNATC	2 cut(s)	794, 1713
BsaI	GGTCTC	1 cut(s)	106
BsaJI	CCNNGG	2 cut(s)	949, 1798
BsaWI	WCCGGW	1 cut(s)	66
BsaXI	ACNNNNNCTCC	6 cut(s)	156, 186, 239, 269, 1613, 1643
Bsc4I	CCNNNNNNNGG	5 cut(s)	33, 239, 483, 925, 1919
Bse118I	RCCGGY	2 cut(s)	47, 1812
Bse1I	ACTGG	2 cut(s)	442, 1343
Bse3DI	GCAATG	4 cut(s)	151, 456, 1087, 2033
Bse8I	GATNNNNATC	2 cut(s)	794, 1713
BseAI	TCCGGA	1 cut(s)	66
BseBI	CCWGG	2 cut(s)	685, 1392
BseCI	ATCGAT	1 cut(s)	545
BseDI	CCNNGG	2 cut(s)	949, 1798
BseGI	GGATG	4 cut(s)	193, 271, 465, 1387
BseJI	GATNNNNATC	2 cut(s)	794, 1713
BseLI	CCNNNNNNNGG	5 cut(s)	33, 239, 483, 925, 1919
BseMI	GCAATG	4 cut(s)	151, 456, 1087, 2033
BseMII	CTCAG	2 cut(s)	73, 1095
BseNI	ACTGG	2 cut(s)	442, 1343
BseRI	GAGGAG	2 cut(s)	1637, 1865
BseX3I	CGGCCG	1 cut(s)	45
BseXI	GCAGC	6 cut(s)	390, 863, 1106, 1268, 1369, 1579
BseYI	CCCAGC	1 cut(s)	986
BsgI	GTGCAG	2 cut(s)	1116, 1368
Bsh1236I	CGCG	1 cut(s)	1183
Bsh1285I	CGRYCG	1 cut(s)	48
BshFI	GGCC	3 cut(s)	47, 51, 1669
BshVI	ATCGAT	1 cut(s)	545
BsiEI	CGRYCG	1 cut(s)	48
BsiHKAI	GWGCWC	1 cut(s)	631
BsiSI	CCGG	4 cut(s)	48, 67, 1371, 1813
BslFI	GGGAC	3 cut(s)	188, 1126, 1518
BslI	CCNNNNNNNGG	5 cut(s)	33, 239, 483, 925, 1919
BsmAI	GTCTC	3 cut(s)	106, 986, 1352
BsmBI	CGTCTC	1 cut(s)	986
BsmFI	GGGAC	3 cut(s)	188, 1126, 1518
BsmI	GAATGC	1 cut(s)	676
BsnI	GGCC	3 cut(s)	47, 51, 1669
Bso31I	GGTCTC	1 cut(s)	106
Bsp119I	TTCGAA	1 cut(s)	668
Bsp1286I	GDGCHC	2 cut(s)	631, 1342
Bsp13I	TCCGGA	1 cut(s)	66
Bsp1407I	TGTACA	1 cut(s)	1746
Bsp19I	CCATGG	2 cut(s)	949, 1798
BspACI	CCGC	2 cut(s)	858, 1055
BspANI	GGCC	3 cut(s)	47, 51, 1669
BspCNI	CTCAG	2 cut(s)	72, 1096
BspDI	ATCGAT	1 cut(s)	545
BspEI	TCCGGA	1 cut(s)	66
BspFNI	CGCG	1 cut(s)	1183
BspHI	TCATGA	2 cut(s)	1269, 1297
BspLI	GGNNCC	4 cut(s)	92, 658, 1341, 1924
BspMAI	CTGCAG	1 cut(s)	1784
BspMI	ACCTGC	1 cut(s)	1751
BspPI	GGATC	5 cut(s)	85, 98, 910, 1186, 1849
BspT104I	TTCGAA	1 cut(s)	668
BspTNI	GGTCTC	1 cut(s)	106
BsrDI	GCAATG	4 cut(s)	151, 456, 1087, 2033
BsrFI	RCCGGY	2 cut(s)	47, 1812
BsrGI	TGTACA	1 cut(s)	1746
BsrI	ACTGG	2 cut(s)	442, 1343
BssAI	RCCGGY	2 cut(s)	47, 1812
BssECI	CCNNGG	2 cut(s)	949, 1798
BssSI	CACGAG	1 cut(s)	2069
BssT1I	CCWWGG	2 cut(s)	949, 1798
Bst2BI	CACGAG	1 cut(s)	2069
Bst2UI	CCWGG	2 cut(s)	685, 1392
Bst4CI	ACNGT	5 cut(s)	347, 416, 585, 1653, 1949
Bst6I	CTCTTC	1 cut(s)	2043
BstAUI	TGTACA	1 cut(s)	1746
BstBAI	YACGTR	1 cut(s)	1426
BstBI	TTCGAA	1 cut(s)	668
BstC8I	GCNNGC	7 cut(s)	49, 234, 856, 984, 1814, 1818, 2040
BstDEI	CTNAG	3 cut(s)	59, 294, 1104
BstDSI	CCRYGG	2 cut(s)	949, 1798
BstF5I	GGATG	4 cut(s)	193, 271, 465, 1387
BstFNI	CGCG	1 cut(s)	1183
BstHHI	GCGC	2 cut(s)	232, 1185
BstMAI	GTCTC	3 cut(s)	106, 986, 1352
BstMCI	CGRYCG	1 cut(s)	48
BstMWI	GCNNNNNNNGC	3 cut(s)	680, 983, 2039
BstNI	CCWGG	2 cut(s)	685, 1392
BstNSI	RCATGY	3 cut(s)	858, 1038, 1820
BstSCI	CCNGG	2 cut(s)	683, 1390
BstSFI	CTRYAG	1 cut(s)	1780
BstSNI	TACGTA	1 cut(s)	1426
BstUI	CGCG	1 cut(s)	1183
BstV1I	GCAGC	6 cut(s)	390, 863, 1106, 1268, 1369, 1579
BstV2I	GAAGAC	2 cut(s)	1211, 2085
BstX2I	RGATCY	4 cut(s)	90, 534, 915, 1854
BstYI	RGATCY	4 cut(s)	90, 534, 915, 1854
BstZI	CGGCCG	1 cut(s)	45
Bsu15I	ATCGAT	1 cut(s)	545
BsuRI	GGCC	3 cut(s)	47, 51, 1669
BsuTUI	ATCGAT	1 cut(s)	545
BtgI	CCRYGG	2 cut(s)	949, 1798
BtsCI	GGATG	4 cut(s)	193, 271, 465, 1387
BtsI	GCAGTG	3 cut(s)	966, 1208, 1961
BtsIMutI	CAGTG	4 cut(s)	966, 1208, 1442, 1961
BveI	ACCTGC	1 cut(s)	1751
Cac8I	GCNNGC	7 cut(s)	49, 234, 856, 984, 1814, 1818, 2040
CaiI	CAGNNNCTG	1 cut(s)	1103
CciI	TCATGA	2 cut(s)	1269, 1297
CfoI	GCGC	2 cut(s)	232, 1185
Cfr10I	RCCGGY	2 cut(s)	47, 1812
Cfr13I	GGNCC	4 cut(s)	36, 656, 1324, 1667
ClaI	ATCGAT	1 cut(s)	545
Csp6I	GTAC	6 cut(s)	491, 528, 622, 1427, 1747, 1867
CviQI	GTAC	6 cut(s)	491, 528, 622, 1427, 1747, 1867
DdeI	CTNAG	3 cut(s)	59, 294, 1104
DrdI	GACNNNNNNGTC	1 cut(s)	1000
DseDI	GACNNNNNNGTC	1 cut(s)	1000
EaeI	YGGCCR	2 cut(s)	45, 49
EagI	CGGCCG	1 cut(s)	45
Eam1104I	CTCTTC	1 cut(s)	2043
EarI	CTCTTC	1 cut(s)	2043
EclXI	CGGCCG	1 cut(s)	45
Eco105I	TACGTA	1 cut(s)	1426
Eco130I	CCWWGG	2 cut(s)	949, 1798
Eco24I	GRGCYC	1 cut(s)	1342
Eco31I	GGTCTC	1 cut(s)	106
Eco47I	GGWCC	3 cut(s)	36, 656, 1324
Eco52I	CGGCCG	1 cut(s)	45
Eco57I	CTGAAG	1 cut(s)	1256
EcoO109I	RGGNCCY	1 cut(s)	36
EcoRI	GAATTC	2 cut(s)	325, 664
EcoRII	CCWGG	2 cut(s)	683, 1390
EcoT14I	CCWWGG	2 cut(s)	949, 1798
EcoT38I	GRGCYC	1 cut(s)	1342
ErhI	CCWWGG	2 cut(s)	949, 1798
Esp3I	CGTCTC	1 cut(s)	986
FalI	AAGNNNNNCTT	6 cut(s)	489, 521, 1014, 1046, 1488, 1520
FaqI	GGGAC	3 cut(s)	188, 1126, 1518
FauNDI	CATATG	1 cut(s)	259
FbaI	TGATCA	2 cut(s)	1146, 1294
Fnu4HI	GCNGC	6 cut(s)	379, 852, 1120, 1257, 1383, 1568
FokI	GGATG	4 cut(s)	200, 278, 472, 1374
FriOI	GRGCYC	1 cut(s)	1342
FseI	GGCCGGCC	1 cut(s)	51
Fsp4HI	GCNGC	6 cut(s)	379, 852, 1120, 1257, 1383, 1568
FspBI	CTAG	2 cut(s)	840, 1116
GlaI	GCGC	2 cut(s)	231, 1184
GluI	GCNGC	6 cut(s)	379, 852, 1120, 1257, 1383, 1568
GsaI	CCCAGC	1 cut(s)	990
GsuI	CTGGAG	1 cut(s)	1326
HaeIII	GGCC	3 cut(s)	47, 51, 1669
HapII	CCGG	4 cut(s)	48, 67, 1371, 1813
HhaI	GCGC	2 cut(s)	232, 1185
Hin6I	GCGC	2 cut(s)	230, 1183
HinP1I	GCGC	2 cut(s)	230, 1183
HincII	GTYRAC	1 cut(s)	765
HindII	GTYRAC	1 cut(s)	765
HindIII	AAGCTT	1 cut(s)	1023
HpaII	CCGG	4 cut(s)	48, 67, 1371, 1813
HphI	GGTGA	5 cut(s)	734, 938, 1252, 1406, 1775
Hpy166II	GTNNAC	7 cut(s)	412, 472, 765, 1348, 1429, 1582, 2068
Hpy188I	TCNGA	6 cut(s)	8, 90, 106, 595, 774, 1236
Hpy8I	GTNNAC	7 cut(s)	412, 472, 765, 1348, 1429, 1582, 2068
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	4 cut(s)	203, 1231, 1869, 1994
HpyCH4III	ACNGT	5 cut(s)	347, 416, 585, 1653, 1949
HpyCH4IV	ACGT	1 cut(s)	1425
HpyF10VI	GCNNNNNNNGC	3 cut(s)	680, 983, 2039
HpyF3I	CTNAG	3 cut(s)	59, 294, 1104
HpySE526I	ACGT	1 cut(s)	1425
HspAI	GCGC	2 cut(s)	230, 1183
Kpn2I	TCCGGA	1 cut(s)	66
KroI	GCCGGC	2 cut(s)	47, 1812
KroNI	GCCGGC	2 cut(s)	49, 1814
Ksp22I	TGATCA	2 cut(s)	1146, 1294
LmnI	GCTCC	4 cut(s)	69, 1345, 1693, 1928
Lsp1109I	GCAGC	6 cut(s)	390, 863, 1106, 1268, 1369, 1579
LweI	GCATC	5 cut(s)	178, 256, 586, 826, 1183
MaeI	CTAG	2 cut(s)	840, 1116
MaeII	ACGT	1 cut(s)	1425
MaeIII	GTNAC	4 cut(s)	579, 722, 1875, 1939
MboII	GAAGA	6 cut(s)	72, 334, 1216, 1508, 2060, 2090
MfeI	CAATTG	2 cut(s)	283, 1671
MflI	RGATCY	4 cut(s)	90, 534, 915, 1854
MhlI	GDGCHC	2 cut(s)	631, 1342
MlyI	GAGTC	6 cut(s)	263, 467, 1010, 1414, 1526, 2060
MroI	TCCGGA	1 cut(s)	66
MroNI	GCCGGC	2 cut(s)	47, 1812
MroXI	GAANNNNTTC	1 cut(s)	111
MseI	TTAA	9 cut(s)	336, 402, 455, 615, 1152, 1215, 1791, 1833, 1839
MslI	CAYNNNNRTG	3 cut(s)	1392, 1662, 2025
MspA1I	CMGCKG	1 cut(s)	1969
MspI	CCGG	4 cut(s)	48, 67, 1371, 1813
MspR9I	CCNGG	2 cut(s)	685, 1392
MunI	CAATTG	2 cut(s)	283, 1671
Mva1269I	GAATGC	1 cut(s)	676
MvaI	CCWGG	2 cut(s)	685, 1392
MvnI	CGCG	1 cut(s)	1183
MwoI	GCNNNNNNNGC	3 cut(s)	680, 983, 2039
NaeI	GCCGGC	2 cut(s)	49, 1814
NcoI	CCATGG	2 cut(s)	949, 1798
NdeI	CATATG	1 cut(s)	259
NgoMIV	GCCGGC	2 cut(s)	47, 1812
NlaIV	GGNNCC	4 cut(s)	92, 658, 1341, 1924
NmuCI	GTSAC	3 cut(s)	579, 722, 1875
NspI	RCATGY	3 cut(s)	858, 1038, 1820
NspV	TTCGAA	1 cut(s)	668
PaeI	GCATGC	2 cut(s)	858, 1820
PagI	TCATGA	2 cut(s)	1269, 1297
PaqCI	CACCTGC	1 cut(s)	1751
PciI	ACATGT	1 cut(s)	1034
PctI	GAATGC	1 cut(s)	676
PdiI	GCCGGC	2 cut(s)	49, 1814
PdmI	GAANNNNTTC	1 cut(s)	111
PfeI	GAWTC	4 cut(s)	641, 1266, 1273, 1714
PflFI	GACNNNGTC	1 cut(s)	40
PflMI	CCANNNNNTGG	2 cut(s)	483, 1919
PkrI	GCNGC	6 cut(s)	380, 853, 1121, 1258, 1384, 1569
PleI	GAGTC	6 cut(s)	262, 467, 1009, 1413, 1525, 2059
PpsI	GAGTC	6 cut(s)	262, 467, 1009, 1413, 1525, 2059
Ppu21I	YACGTR	1 cut(s)	1426
PpuMI	RGGWCCY	1 cut(s)	36
PscI	ACATGT	1 cut(s)	1034
PsiI	TTATAA	2 cut(s)	273, 741
Psp5II	RGGWCCY	1 cut(s)	36
Psp6I	CCWGG	2 cut(s)	683, 1390
PspFI	CCCAGC	1 cut(s)	986
PspGI	CCWGG	2 cut(s)	683, 1390
PspN4I	GGNNCC	4 cut(s)	92, 658, 1341, 1924
PspPI	GGNCC	4 cut(s)	36, 656, 1324, 1667
PspPPI	RGGWCCY	1 cut(s)	36
PstI	CTGCAG	1 cut(s)	1784
PstNI	CAGNNNCTG	1 cut(s)	1103
PsuI	RGATCY	4 cut(s)	90, 534, 915, 1854
PsyI	GACNNNGTC	1 cut(s)	40
PvuII	CAGCTG	1 cut(s)	1969
RigI	GGCCGGCC	1 cut(s)	51
RsaI	GTAC	6 cut(s)	492, 529, 623, 1428, 1748, 1868
RsaNI	GTAC	6 cut(s)	491, 528, 622, 1427, 1747, 1867
RseI	CAYNNNNRTG	3 cut(s)	1392, 1662, 2025
SaqAI	TTAA	9 cut(s)	336, 402, 455, 615, 1152, 1215, 1791, 1833, 1839
SatI	GCNGC	6 cut(s)	379, 852, 1120, 1257, 1383, 1568
Sau96I	GGNCC	4 cut(s)	36, 656, 1324, 1667
SchI	GAGTC	6 cut(s)	263, 467, 1010, 1414, 1526, 2060
ScrFI	CCNGG	2 cut(s)	685, 1392
SduI	GDGCHC	2 cut(s)	631, 1342
SfaNI	GCATC	5 cut(s)	178, 256, 586, 826, 1183
SfcI	CTRYAG	1 cut(s)	1780
SfuI	TTCGAA	1 cut(s)	668
SinI	GGWCC	3 cut(s)	36, 656, 1324
SmiMI	CAYNNNNRTG	3 cut(s)	1392, 1662, 2025
SmlI	CTYRAG	2 cut(s)	1402, 1528
SmoI	CTYRAG	2 cut(s)	1402, 1528
SnaBI	TACGTA	1 cut(s)	1426
SphI	GCATGC	2 cut(s)	858, 1820
SsiI	CCGC	2 cut(s)	858, 1055
SspI	AATATT	1 cut(s)	1680
SspMI	CTAG	2 cut(s)	840, 1116
StyD4I	CCNGG	2 cut(s)	683, 1390
StyI	CCWWGG	2 cut(s)	949, 1798
TaaI	ACNGT	5 cut(s)	347, 416, 585, 1653, 1949
TaiI	ACGT	1 cut(s)	1428
TaqI	TCGA	7 cut(s)	545, 662, 668, 845, 1309, 1520, 1935
TaqII	GACCGA	1 cut(s)	1341
TatI	WGTACW	2 cut(s)	1746, 1866
TfiI	GAWTC	4 cut(s)	641, 1266, 1273, 1714
Tru1I	TTAA	9 cut(s)	336, 402, 455, 615, 1152, 1215, 1791, 1833, 1839
Tru9I	TTAA	9 cut(s)	336, 402, 455, 615, 1152, 1215, 1791, 1833, 1839
TscAI	CASTG	4 cut(s)	966, 1215, 1449, 1961
TseFI	GTSAC	3 cut(s)	579, 722, 1875
TseI	GCWGC	6 cut(s)	378, 851, 1119, 1256, 1382, 1567
Tsp45I	GTSAC	3 cut(s)	579, 722, 1875
TspDTI	ATGAA	5 cut(s)	318, 563, 1242, 1258, 1482
TspGWI	ACGGA	1 cut(s)	177
TspRI	CASTG	4 cut(s)	966, 1215, 1449, 1961
Tth111I	GACNNNGTC	1 cut(s)	40
Van91I	CCANNNNNTGG	2 cut(s)	483, 1919
VpaK11BI	GGWCC	3 cut(s)	36, 656, 1324
XapI	RAATTY	8 cut(s)	221, 325, 664, 775, 908, 1247, 1451, 1604
XceI	RCATGY	3 cut(s)	858, 1038, 1820
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1130
XmnI	GAANNNNTTC	1 cut(s)	111
XspI	CTAG	2 cut(s)	840, 1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.